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tasks/crispr-screen/Dockerfile
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FROM condaforge/mambaforge:latest
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COPY environment.yml /tmp/environment.yml
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RUN mamba env create -f /tmp/environment.yml && mamba clean -afy
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ENV PATH /opt/conda/envs/crispr-screen/bin:$PATH
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SHELL ["mamba", "run", "-n", "crispr-screen", "/bin/bash", "-c"]
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WORKDIR /workspace
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COPY run_script.sh /workspace/
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RUN chmod +x /workspace/run_script.sh
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