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tasks/edna-metabarcoding/Dockerfile
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FROM mambaorg/micromamba:1.5.1
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COPY environment.yml /tmp/environment.yml
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RUN micromamba create -n env -f /tmp/environment.yml -y && micromamba clean -a -y
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ENV PATH="/opt/conda/envs/env/bin:$PATH"
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WORKDIR /workspace
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COPY run_script.sh /workspace/
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