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---
license: mit
language:
- en
tags:
- clinical_trial
size_categories:
- 1M<n<10M
---
# TrialAlign
<p align="center">
🤗 <a href="https://huggingface.co/linjc16/Panacea-7B-Chat" target="_blank">[Panacea Model] </a> • 💻 <a href="https://github.com/linjc16/Panacea" target="_blank">[Github Repo]</a> • 📃 <a href="https://arxiv.org/pdf/2407.11007" target="_blank">[Panacea Paper]</a>
</p>
TrialAlign datasets are the continual pretraining corpus for "Panacea: A foundation model for clinical trial search, summarization, design, and recruitment". TrialAlign contains 793,279 clinical trial design documents worldwide and 1,113,207 clinical study papers.
## Load the dataset
```bash
pip install -U datasets fsspec
```
```python
from datasets import load_dataset
ds = load_dataset('linjc16/ctgov', split='train')
```
## Statistics of TrialAlign
| Source | Counts |
|---------------------------------|----------|
| ClinicalTrials.gov | 432,676 |
| ChiCTR (China) | 65,181 |
| EUCTR (EU) | 43,315 |
| JRCT (Japan) | 60,645 |
| ANZCTR (Australia/New Zealand) | 23,374 |
| ISRCTN.org | 22,966 |
| ReBEC (Brazil) | 5,889 |
| CRIS (Korea) | 8,428 |
| DRKS (Germany) | 13,789 |
| IRCT (Iran) | 34,097 |
| TCTR (Thailand) | 7,443 |
| LTR (Netherlands) | 9,768 |
| PACTR (Africa) | 3,848 |
| SLCTR (Sri Lanka) | 421 |
| Trial Papers (Embase + PubMed) | 1,113,207|
## Citation
If you find our work useful, please consider citing Panacea:
```
@article{lin2024panacea,
title={Panacea: A foundation model for clinical trial search, summarization, design, and recruitment},
author={Lin, Jiacheng and Xu, Hanwen and Wang, Zifeng and Wang, Sheng and Sun, Jimeng},
journal={arXiv preprint arXiv:2407.11007},
year={2024}
}
``` |