| { | |
| "created": "2026-07-20 23:28:26", | |
| "datasets": [ | |
| { | |
| "name": "phase3_v5_1", | |
| "train_path": "data/phase3_v5_1_pair_clustered/train.lmdb", | |
| "val_path": "data/phase3_v5_1_pair_clustered/val.lmdb", | |
| "n_train": 2952, | |
| "n_val": 328, | |
| "load_errors": 0, | |
| "entries_with_disorder_label": 0, | |
| "plddt": { | |
| "count": 0 | |
| }, | |
| "exact_overlap": { | |
| "pdb_id": { | |
| "train_unique": 2952, | |
| "val_unique": 328, | |
| "overlap_count": 0, | |
| "overlap_examples": [] | |
| }, | |
| "sequence": { | |
| "train_unique": 0, | |
| "val_unique": 0, | |
| "overlap_count": 0, | |
| "overlap_examples": [] | |
| }, | |
| "vh_sequence": { | |
| "train_unique": 2309, | |
| "val_unique": 317, | |
| "overlap_count": 0, | |
| "overlap_examples": [] | |
| }, | |
| "vl_sequence": { | |
| "train_unique": 1672, | |
| "val_unique": 127, | |
| "overlap_count": 1, | |
| "overlap_examples": [ | |
| "DIQMTQSPSFLSASVGDRVTINCKASQNVNKYLDWYQQNLGEPPKLLIYHTNSLPTGIPSRFSGSGSGTDFTLTISSLQVEDVATYFCLQHDSGLTFGSGTKLEIKRADAAPTVSIFPPSMEQLTSGGATVVCFVNNFYPRDISVKWKIDGSEQRDGVLDSVTDQDSKDSTYSMSSTLSLTKVEYERHNLYTCEVVHKTSSSPVVKSFNRNE" | |
| ] | |
| }, | |
| "cdr_h3_sequence": { | |
| "train_unique": 1022, | |
| "val_unique": 312, | |
| "overlap_count": 0, | |
| "overlap_examples": [] | |
| }, | |
| "antigen_sequence": { | |
| "train_unique": 2394, | |
| "val_unique": 324, | |
| "overlap_count": 0, | |
| "overlap_examples": [] | |
| } | |
| }, | |
| "homology_overlap": { | |
| "vh_sequence": { | |
| "min_identity": 0.5, | |
| "coverage": 0.8, | |
| "train_clusters": 20, | |
| "val_clusters": 14, | |
| "cross_split_clusters": 8, | |
| "cluster_examples": [ | |
| "1093", | |
| "1977", | |
| "2863", | |
| "2960", | |
| "2978", | |
| "30", | |
| "3215", | |
| "434" | |
| ] | |
| }, | |
| "vl_sequence": { | |
| "min_identity": 0.5, | |
| "coverage": 0.8, | |
| "train_clusters": 10, | |
| "val_clusters": 8, | |
| "cross_split_clusters": 7, | |
| "cluster_examples": [ | |
| "0", | |
| "1236", | |
| "1615", | |
| "2324", | |
| "2954", | |
| "3250", | |
| "75" | |
| ] | |
| }, | |
| "cdr_h3_sequence": { | |
| "min_identity": 0.5, | |
| "coverage": 0.8, | |
| "train_clusters": 647, | |
| "val_clusters": 258, | |
| "cross_split_clusters": 23, | |
| "cluster_examples": [ | |
| "1323", | |
| "2322", | |
| "2953", | |
| "2958", | |
| "2960", | |
| "2966", | |
| "2969", | |
| "2974", | |
| "3012", | |
| "3030" | |
| ] | |
| }, | |
| "antigen_sequence": { | |
| "min_identity": 0.3, | |
| "coverage": 0.8, | |
| "train_clusters": 535, | |
| "val_clusters": 279, | |
| "cross_split_clusters": 0, | |
| "cluster_examples": [] | |
| } | |
| }, | |
| "elapsed_seconds": 122.47 | |
| } | |
| ] | |
| } |