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C2-SegDB

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Organize dataset groups in English

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Files changed (50) hide show
  1. .filelist +124 -0
  2. README.md +19 -0
  3. anonymous_group_map.csv +41 -0
  4. images/{case_0001_0000.nii.gz → aneurysm/case_0001_0000.nii.gz} +0 -0
  5. images/{case_0001_0001.nii.gz → aneurysm/case_0001_0001.nii.gz} +0 -0
  6. images/{case_0002_0000.nii.gz → aneurysm/case_0002_0000.nii.gz} +0 -0
  7. images/{case_0002_0001.nii.gz → aneurysm/case_0002_0001.nii.gz} +0 -0
  8. images/{case_0003_0000.nii.gz → aneurysm/case_0003_0000.nii.gz} +0 -0
  9. images/{case_0003_0001.nii.gz → aneurysm/case_0003_0001.nii.gz} +0 -0
  10. images/{case_0004_0000.nii.gz → aneurysm/case_0004_0000.nii.gz} +0 -0
  11. images/{case_0004_0001.nii.gz → aneurysm/case_0004_0001.nii.gz} +0 -0
  12. images/{case_0005_0000.nii.gz → aneurysm/case_0005_0000.nii.gz} +0 -0
  13. images/{case_0005_0001.nii.gz → aneurysm/case_0005_0001.nii.gz} +0 -0
  14. images/{case_0006_0000.nii.gz → aneurysm/case_0006_0000.nii.gz} +0 -0
  15. images/{case_0006_0001.nii.gz → aneurysm/case_0006_0001.nii.gz} +0 -0
  16. images/{case_0007_0000.nii.gz → aneurysm/case_0007_0000.nii.gz} +0 -0
  17. images/{case_0007_0001.nii.gz → aneurysm/case_0007_0001.nii.gz} +0 -0
  18. images/{case_0008_0000.nii.gz → aneurysm/case_0008_0000.nii.gz} +0 -0
  19. images/{case_0008_0001.nii.gz → aneurysm/case_0008_0001.nii.gz} +0 -0
  20. images/{case_0009_0000.nii.gz → aneurysm/case_0009_0000.nii.gz} +0 -0
  21. images/{case_0009_0001.nii.gz → aneurysm/case_0009_0001.nii.gz} +0 -0
  22. images/{case_0010_0000.nii.gz → aneurysm/case_0010_0000.nii.gz} +0 -0
  23. images/{case_0010_0001.nii.gz → aneurysm/case_0010_0001.nii.gz} +0 -0
  24. images/{case_0011_0000.nii.gz → aneurysm/case_0011_0000.nii.gz} +0 -0
  25. images/{case_0011_0001.nii.gz → aneurysm/case_0011_0001.nii.gz} +0 -0
  26. images/{case_0012_0000.nii.gz → aneurysm/case_0012_0000.nii.gz} +0 -0
  27. images/{case_0012_0001.nii.gz → aneurysm/case_0012_0001.nii.gz} +0 -0
  28. images/{case_0013_0000.nii.gz → aneurysm/case_0013_0000.nii.gz} +0 -0
  29. images/{case_0013_0001.nii.gz → aneurysm/case_0013_0001.nii.gz} +0 -0
  30. images/{case_0014_0000.nii.gz → aneurysm/case_0014_0000.nii.gz} +0 -0
  31. images/{case_0014_0001.nii.gz → aneurysm/case_0014_0001.nii.gz} +0 -0
  32. images/{case_0015_0000.nii.gz → aneurysm/case_0015_0000.nii.gz} +0 -0
  33. images/{case_0015_0001.nii.gz → aneurysm/case_0015_0001.nii.gz} +0 -0
  34. images/{case_0016_0000.nii.gz → aneurysm/case_0016_0000.nii.gz} +0 -0
  35. images/{case_0016_0001.nii.gz → aneurysm/case_0016_0001.nii.gz} +0 -0
  36. images/{case_0017_0000.nii.gz → aneurysm/case_0017_0000.nii.gz} +0 -0
  37. images/{case_0017_0001.nii.gz → aneurysm/case_0017_0001.nii.gz} +0 -0
  38. images/{case_0018_0000.nii.gz → aneurysm/case_0018_0000.nii.gz} +0 -0
  39. images/{case_0018_0001.nii.gz → aneurysm/case_0018_0001.nii.gz} +0 -0
  40. images/{case_0019_0000.nii.gz → aneurysm/case_0019_0000.nii.gz} +0 -0
  41. images/{case_0019_0001.nii.gz → aneurysm/case_0019_0001.nii.gz} +0 -0
  42. images/{case_0020_0000.nii.gz → aneurysm/case_0020_0000.nii.gz} +0 -0
  43. images/{case_0020_0001.nii.gz → aneurysm/case_0020_0001.nii.gz} +0 -0
  44. images/{case_0021_0000.nii.gz → control/case_0021_0000.nii.gz} +0 -0
  45. images/{case_0021_0001.nii.gz → control/case_0021_0001.nii.gz} +0 -0
  46. images/{case_0022_0000.nii.gz → control/case_0022_0000.nii.gz} +0 -0
  47. images/{case_0022_0001.nii.gz → control/case_0022_0001.nii.gz} +0 -0
  48. images/{case_0023_0000.nii.gz → control/case_0023_0000.nii.gz} +0 -0
  49. images/{case_0023_0001.nii.gz → control/case_0023_0001.nii.gz} +0 -0
  50. images/{case_0024_0000.nii.gz → control/case_0024_0000.nii.gz} +0 -0
.filelist ADDED
@@ -0,0 +1,124 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ .filelist
2
+ .gitattributes
3
+ README.md
4
+ anonymous_group_map.csv
5
+ images/aneurysm/case_0001_0000.nii.gz
6
+ images/aneurysm/case_0001_0001.nii.gz
7
+ images/aneurysm/case_0002_0000.nii.gz
8
+ images/aneurysm/case_0002_0001.nii.gz
9
+ images/aneurysm/case_0003_0000.nii.gz
10
+ images/aneurysm/case_0003_0001.nii.gz
11
+ images/aneurysm/case_0004_0000.nii.gz
12
+ images/aneurysm/case_0004_0001.nii.gz
13
+ images/aneurysm/case_0005_0000.nii.gz
14
+ images/aneurysm/case_0005_0001.nii.gz
15
+ images/aneurysm/case_0006_0000.nii.gz
16
+ images/aneurysm/case_0006_0001.nii.gz
17
+ images/aneurysm/case_0007_0000.nii.gz
18
+ images/aneurysm/case_0007_0001.nii.gz
19
+ images/aneurysm/case_0008_0000.nii.gz
20
+ images/aneurysm/case_0008_0001.nii.gz
21
+ images/aneurysm/case_0009_0000.nii.gz
22
+ images/aneurysm/case_0009_0001.nii.gz
23
+ images/aneurysm/case_0010_0000.nii.gz
24
+ images/aneurysm/case_0010_0001.nii.gz
25
+ images/aneurysm/case_0011_0000.nii.gz
26
+ images/aneurysm/case_0011_0001.nii.gz
27
+ images/aneurysm/case_0012_0000.nii.gz
28
+ images/aneurysm/case_0012_0001.nii.gz
29
+ images/aneurysm/case_0013_0000.nii.gz
30
+ images/aneurysm/case_0013_0001.nii.gz
31
+ images/aneurysm/case_0014_0000.nii.gz
32
+ images/aneurysm/case_0014_0001.nii.gz
33
+ images/aneurysm/case_0015_0000.nii.gz
34
+ images/aneurysm/case_0015_0001.nii.gz
35
+ images/aneurysm/case_0016_0000.nii.gz
36
+ images/aneurysm/case_0016_0001.nii.gz
37
+ images/aneurysm/case_0017_0000.nii.gz
38
+ images/aneurysm/case_0017_0001.nii.gz
39
+ images/aneurysm/case_0018_0000.nii.gz
40
+ images/aneurysm/case_0018_0001.nii.gz
41
+ images/aneurysm/case_0019_0000.nii.gz
42
+ images/aneurysm/case_0019_0001.nii.gz
43
+ images/aneurysm/case_0020_0000.nii.gz
44
+ images/aneurysm/case_0020_0001.nii.gz
45
+ images/control/case_0021_0000.nii.gz
46
+ images/control/case_0021_0001.nii.gz
47
+ images/control/case_0022_0000.nii.gz
48
+ images/control/case_0022_0001.nii.gz
49
+ images/control/case_0023_0000.nii.gz
50
+ images/control/case_0023_0001.nii.gz
51
+ images/control/case_0024_0000.nii.gz
52
+ images/control/case_0024_0001.nii.gz
53
+ images/control/case_0025_0000.nii.gz
54
+ images/control/case_0025_0001.nii.gz
55
+ images/control/case_0026_0000.nii.gz
56
+ images/control/case_0026_0001.nii.gz
57
+ images/control/case_0027_0000.nii.gz
58
+ images/control/case_0027_0001.nii.gz
59
+ images/control/case_0028_0000.nii.gz
60
+ images/control/case_0028_0001.nii.gz
61
+ images/control/case_0029_0000.nii.gz
62
+ images/control/case_0029_0001.nii.gz
63
+ images/control/case_0030_0000.nii.gz
64
+ images/control/case_0030_0001.nii.gz
65
+ images/control/case_0031_0000.nii.gz
66
+ images/control/case_0031_0001.nii.gz
67
+ images/control/case_0032_0000.nii.gz
68
+ images/control/case_0032_0001.nii.gz
69
+ images/control/case_0033_0000.nii.gz
70
+ images/control/case_0033_0001.nii.gz
71
+ images/control/case_0034_0000.nii.gz
72
+ images/control/case_0034_0001.nii.gz
73
+ images/control/case_0035_0000.nii.gz
74
+ images/control/case_0035_0001.nii.gz
75
+ images/control/case_0036_0000.nii.gz
76
+ images/control/case_0036_0001.nii.gz
77
+ images/control/case_0037_0000.nii.gz
78
+ images/control/case_0037_0001.nii.gz
79
+ images/control/case_0038_0000.nii.gz
80
+ images/control/case_0038_0001.nii.gz
81
+ images/control/case_0039_0000.nii.gz
82
+ images/control/case_0039_0001.nii.gz
83
+ images/control/case_0040_0000.nii.gz
84
+ images/control/case_0040_0001.nii.gz
85
+ labels/aneurysm/case_0001.nii.gz
86
+ labels/aneurysm/case_0002.nii.gz
87
+ labels/aneurysm/case_0003.nii.gz
88
+ labels/aneurysm/case_0004.nii.gz
89
+ labels/aneurysm/case_0005.nii.gz
90
+ labels/aneurysm/case_0006.nii.gz
91
+ labels/aneurysm/case_0007.nii.gz
92
+ labels/aneurysm/case_0008.nii.gz
93
+ labels/aneurysm/case_0009.nii.gz
94
+ labels/aneurysm/case_0010.nii.gz
95
+ labels/aneurysm/case_0011.nii.gz
96
+ labels/aneurysm/case_0012.nii.gz
97
+ labels/aneurysm/case_0013.nii.gz
98
+ labels/aneurysm/case_0014.nii.gz
99
+ labels/aneurysm/case_0015.nii.gz
100
+ labels/aneurysm/case_0016.nii.gz
101
+ labels/aneurysm/case_0017.nii.gz
102
+ labels/aneurysm/case_0018.nii.gz
103
+ labels/aneurysm/case_0019.nii.gz
104
+ labels/aneurysm/case_0020.nii.gz
105
+ labels/control/case_0021.nii.gz
106
+ labels/control/case_0022.nii.gz
107
+ labels/control/case_0023.nii.gz
108
+ labels/control/case_0024.nii.gz
109
+ labels/control/case_0025.nii.gz
110
+ labels/control/case_0026.nii.gz
111
+ labels/control/case_0027.nii.gz
112
+ labels/control/case_0028.nii.gz
113
+ labels/control/case_0029.nii.gz
114
+ labels/control/case_0030.nii.gz
115
+ labels/control/case_0031.nii.gz
116
+ labels/control/case_0032.nii.gz
117
+ labels/control/case_0033.nii.gz
118
+ labels/control/case_0034.nii.gz
119
+ labels/control/case_0035.nii.gz
120
+ labels/control/case_0036.nii.gz
121
+ labels/control/case_0037.nii.gz
122
+ labels/control/case_0038.nii.gz
123
+ labels/control/case_0039.nii.gz
124
+ labels/control/case_0040.nii.gz
README.md CHANGED
@@ -1,3 +1,22 @@
1
  ---
2
  license: mit
3
  ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
  ---
2
  license: mit
3
  ---
4
+
5
+ # C2-SegDB
6
+
7
+ An anonymized medical image segmentation dataset organized into two groups:
8
+
9
+ - `aneurysm`: 20 cases
10
+ - `control`: 20 cases
11
+
12
+ Directory layout:
13
+
14
+ ```text
15
+ images/aneurysm/
16
+ images/control/
17
+ labels/aneurysm/
18
+ labels/control/
19
+ ```
20
+
21
+ Each case has two image files, `case_xxxx_0000.nii.gz` and `case_xxxx_0001.nii.gz`, and one label file, `case_xxxx.nii.gz`.
22
+ The file `anonymous_group_map.csv` contains only anonymous case IDs, group names, and anonymous file names.
anonymous_group_map.csv ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ anon_id,group,image_0000,image_0001,label
2
+ case_0001,aneurysm,case_0001_0000.nii.gz,case_0001_0001.nii.gz,case_0001.nii.gz
3
+ case_0002,aneurysm,case_0002_0000.nii.gz,case_0002_0001.nii.gz,case_0002.nii.gz
4
+ case_0003,aneurysm,case_0003_0000.nii.gz,case_0003_0001.nii.gz,case_0003.nii.gz
5
+ case_0004,aneurysm,case_0004_0000.nii.gz,case_0004_0001.nii.gz,case_0004.nii.gz
6
+ case_0005,aneurysm,case_0005_0000.nii.gz,case_0005_0001.nii.gz,case_0005.nii.gz
7
+ case_0006,aneurysm,case_0006_0000.nii.gz,case_0006_0001.nii.gz,case_0006.nii.gz
8
+ case_0007,aneurysm,case_0007_0000.nii.gz,case_0007_0001.nii.gz,case_0007.nii.gz
9
+ case_0008,aneurysm,case_0008_0000.nii.gz,case_0008_0001.nii.gz,case_0008.nii.gz
10
+ case_0009,aneurysm,case_0009_0000.nii.gz,case_0009_0001.nii.gz,case_0009.nii.gz
11
+ case_0010,aneurysm,case_0010_0000.nii.gz,case_0010_0001.nii.gz,case_0010.nii.gz
12
+ case_0011,aneurysm,case_0011_0000.nii.gz,case_0011_0001.nii.gz,case_0011.nii.gz
13
+ case_0012,aneurysm,case_0012_0000.nii.gz,case_0012_0001.nii.gz,case_0012.nii.gz
14
+ case_0013,aneurysm,case_0013_0000.nii.gz,case_0013_0001.nii.gz,case_0013.nii.gz
15
+ case_0014,aneurysm,case_0014_0000.nii.gz,case_0014_0001.nii.gz,case_0014.nii.gz
16
+ case_0015,aneurysm,case_0015_0000.nii.gz,case_0015_0001.nii.gz,case_0015.nii.gz
17
+ case_0016,aneurysm,case_0016_0000.nii.gz,case_0016_0001.nii.gz,case_0016.nii.gz
18
+ case_0017,aneurysm,case_0017_0000.nii.gz,case_0017_0001.nii.gz,case_0017.nii.gz
19
+ case_0018,aneurysm,case_0018_0000.nii.gz,case_0018_0001.nii.gz,case_0018.nii.gz
20
+ case_0019,aneurysm,case_0019_0000.nii.gz,case_0019_0001.nii.gz,case_0019.nii.gz
21
+ case_0020,aneurysm,case_0020_0000.nii.gz,case_0020_0001.nii.gz,case_0020.nii.gz
22
+ case_0021,control,case_0021_0000.nii.gz,case_0021_0001.nii.gz,case_0021.nii.gz
23
+ case_0022,control,case_0022_0000.nii.gz,case_0022_0001.nii.gz,case_0022.nii.gz
24
+ case_0023,control,case_0023_0000.nii.gz,case_0023_0001.nii.gz,case_0023.nii.gz
25
+ case_0024,control,case_0024_0000.nii.gz,case_0024_0001.nii.gz,case_0024.nii.gz
26
+ case_0025,control,case_0025_0000.nii.gz,case_0025_0001.nii.gz,case_0025.nii.gz
27
+ case_0026,control,case_0026_0000.nii.gz,case_0026_0001.nii.gz,case_0026.nii.gz
28
+ case_0027,control,case_0027_0000.nii.gz,case_0027_0001.nii.gz,case_0027.nii.gz
29
+ case_0028,control,case_0028_0000.nii.gz,case_0028_0001.nii.gz,case_0028.nii.gz
30
+ case_0029,control,case_0029_0000.nii.gz,case_0029_0001.nii.gz,case_0029.nii.gz
31
+ case_0030,control,case_0030_0000.nii.gz,case_0030_0001.nii.gz,case_0030.nii.gz
32
+ case_0031,control,case_0031_0000.nii.gz,case_0031_0001.nii.gz,case_0031.nii.gz
33
+ case_0032,control,case_0032_0000.nii.gz,case_0032_0001.nii.gz,case_0032.nii.gz
34
+ case_0033,control,case_0033_0000.nii.gz,case_0033_0001.nii.gz,case_0033.nii.gz
35
+ case_0034,control,case_0034_0000.nii.gz,case_0034_0001.nii.gz,case_0034.nii.gz
36
+ case_0035,control,case_0035_0000.nii.gz,case_0035_0001.nii.gz,case_0035.nii.gz
37
+ case_0036,control,case_0036_0000.nii.gz,case_0036_0001.nii.gz,case_0036.nii.gz
38
+ case_0037,control,case_0037_0000.nii.gz,case_0037_0001.nii.gz,case_0037.nii.gz
39
+ case_0038,control,case_0038_0000.nii.gz,case_0038_0001.nii.gz,case_0038.nii.gz
40
+ case_0039,control,case_0039_0000.nii.gz,case_0039_0001.nii.gz,case_0039.nii.gz
41
+ case_0040,control,case_0040_0000.nii.gz,case_0040_0001.nii.gz,case_0040.nii.gz
images/{case_0001_0000.nii.gz → aneurysm/case_0001_0000.nii.gz} RENAMED
File without changes
images/{case_0001_0001.nii.gz → aneurysm/case_0001_0001.nii.gz} RENAMED
File without changes
images/{case_0002_0000.nii.gz → aneurysm/case_0002_0000.nii.gz} RENAMED
File without changes
images/{case_0002_0001.nii.gz → aneurysm/case_0002_0001.nii.gz} RENAMED
File without changes
images/{case_0003_0000.nii.gz → aneurysm/case_0003_0000.nii.gz} RENAMED
File without changes
images/{case_0003_0001.nii.gz → aneurysm/case_0003_0001.nii.gz} RENAMED
File without changes
images/{case_0004_0000.nii.gz → aneurysm/case_0004_0000.nii.gz} RENAMED
File without changes
images/{case_0004_0001.nii.gz → aneurysm/case_0004_0001.nii.gz} RENAMED
File without changes
images/{case_0005_0000.nii.gz → aneurysm/case_0005_0000.nii.gz} RENAMED
File without changes
images/{case_0005_0001.nii.gz → aneurysm/case_0005_0001.nii.gz} RENAMED
File without changes
images/{case_0006_0000.nii.gz → aneurysm/case_0006_0000.nii.gz} RENAMED
File without changes
images/{case_0006_0001.nii.gz → aneurysm/case_0006_0001.nii.gz} RENAMED
File without changes
images/{case_0007_0000.nii.gz → aneurysm/case_0007_0000.nii.gz} RENAMED
File without changes
images/{case_0007_0001.nii.gz → aneurysm/case_0007_0001.nii.gz} RENAMED
File without changes
images/{case_0008_0000.nii.gz → aneurysm/case_0008_0000.nii.gz} RENAMED
File without changes
images/{case_0008_0001.nii.gz → aneurysm/case_0008_0001.nii.gz} RENAMED
File without changes
images/{case_0009_0000.nii.gz → aneurysm/case_0009_0000.nii.gz} RENAMED
File without changes
images/{case_0009_0001.nii.gz → aneurysm/case_0009_0001.nii.gz} RENAMED
File without changes
images/{case_0010_0000.nii.gz → aneurysm/case_0010_0000.nii.gz} RENAMED
File without changes
images/{case_0010_0001.nii.gz → aneurysm/case_0010_0001.nii.gz} RENAMED
File without changes
images/{case_0011_0000.nii.gz → aneurysm/case_0011_0000.nii.gz} RENAMED
File without changes
images/{case_0011_0001.nii.gz → aneurysm/case_0011_0001.nii.gz} RENAMED
File without changes
images/{case_0012_0000.nii.gz → aneurysm/case_0012_0000.nii.gz} RENAMED
File without changes
images/{case_0012_0001.nii.gz → aneurysm/case_0012_0001.nii.gz} RENAMED
File without changes
images/{case_0013_0000.nii.gz → aneurysm/case_0013_0000.nii.gz} RENAMED
File without changes
images/{case_0013_0001.nii.gz → aneurysm/case_0013_0001.nii.gz} RENAMED
File without changes
images/{case_0014_0000.nii.gz → aneurysm/case_0014_0000.nii.gz} RENAMED
File without changes
images/{case_0014_0001.nii.gz → aneurysm/case_0014_0001.nii.gz} RENAMED
File without changes
images/{case_0015_0000.nii.gz → aneurysm/case_0015_0000.nii.gz} RENAMED
File without changes
images/{case_0015_0001.nii.gz → aneurysm/case_0015_0001.nii.gz} RENAMED
File without changes
images/{case_0016_0000.nii.gz → aneurysm/case_0016_0000.nii.gz} RENAMED
File without changes
images/{case_0016_0001.nii.gz → aneurysm/case_0016_0001.nii.gz} RENAMED
File without changes
images/{case_0017_0000.nii.gz → aneurysm/case_0017_0000.nii.gz} RENAMED
File without changes
images/{case_0017_0001.nii.gz → aneurysm/case_0017_0001.nii.gz} RENAMED
File without changes
images/{case_0018_0000.nii.gz → aneurysm/case_0018_0000.nii.gz} RENAMED
File without changes
images/{case_0018_0001.nii.gz → aneurysm/case_0018_0001.nii.gz} RENAMED
File without changes
images/{case_0019_0000.nii.gz → aneurysm/case_0019_0000.nii.gz} RENAMED
File without changes
images/{case_0019_0001.nii.gz → aneurysm/case_0019_0001.nii.gz} RENAMED
File without changes
images/{case_0020_0000.nii.gz → aneurysm/case_0020_0000.nii.gz} RENAMED
File without changes
images/{case_0020_0001.nii.gz → aneurysm/case_0020_0001.nii.gz} RENAMED
File without changes
images/{case_0021_0000.nii.gz → control/case_0021_0000.nii.gz} RENAMED
File without changes
images/{case_0021_0001.nii.gz → control/case_0021_0001.nii.gz} RENAMED
File without changes
images/{case_0022_0000.nii.gz → control/case_0022_0000.nii.gz} RENAMED
File without changes
images/{case_0022_0001.nii.gz → control/case_0022_0001.nii.gz} RENAMED
File without changes
images/{case_0023_0000.nii.gz → control/case_0023_0000.nii.gz} RENAMED
File without changes
images/{case_0023_0001.nii.gz → control/case_0023_0001.nii.gz} RENAMED
File without changes
images/{case_0024_0000.nii.gz → control/case_0024_0000.nii.gz} RENAMED
File without changes