aging-fly-cell-atlas / metadata /h5ad_processing_info.json
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{
"files_found": [
"GSE218661_adata_head_S_v1.0.h5ad.gz",
"GSE218661_adata_body_S_v1.0.h5ad.gz"
],
"files_processed": {
"afca_head.h5ad": {
"filename": "afca_head.h5ad",
"filepath": "data/afca_head.h5ad",
"n_obs": 289981,
"n_vars": 15992,
"obs_columns": [
"tissue",
"sex",
"age",
"sex_age",
"n_genes_by_counts",
"total_counts",
"total_counts_mt",
"pct_counts_mt",
"log1p_n_genes_by_counts",
"log1p_total_counts",
"log1p_total_counts_mt",
"dataset",
"fca_annotation",
"afca_annotation",
"afca_annotation_broad"
],
"var_columns": [],
"uns_keys": [
"afca_annotation_colors"
],
"obsm_keys": [
"X_pca",
"X_tsne",
"X_umap"
],
"varm_keys": [],
"tissue_type": "head",
"ages": [
"30",
"50",
"70",
"5"
],
"cell_type_columns": [
"fca_annotation",
"afca_annotation",
"afca_annotation_broad"
],
"fca_annotation_unique_values": 82,
"afca_annotation_unique_values": 91
},
"afca_body.h5ad": {
"filename": "afca_body.h5ad",
"filepath": "data/afca_body.h5ad",
"n_obs": 276273,
"n_vars": 15992,
"obs_columns": [
"tissue",
"sex",
"age",
"sex_age",
"n_genes_by_counts",
"total_counts",
"total_counts_mt",
"pct_counts_mt",
"log1p_n_genes_by_counts",
"log1p_total_counts",
"log1p_total_counts_mt",
"dataset",
"fca_annotation",
"afca_annotation",
"afca_annotation_broad"
],
"var_columns": [],
"uns_keys": [
"afca_annotation_colors"
],
"obsm_keys": [
"X_pca",
"X_tsne",
"X_umap"
],
"varm_keys": [],
"tissue_type": "body",
"ages": [
"30",
"50",
"70",
"5"
],
"cell_type_columns": [
"fca_annotation",
"afca_annotation",
"afca_annotation_broad"
],
"fca_annotation_unique_values": 34,
"afca_annotation_unique_values": 73
}
},
"total_cells": 566254,
"total_genes": 15992,
"datasets": {}
}