Datasets:
Update README.md
Browse files
README.md
CHANGED
|
@@ -11,7 +11,9 @@ size_categories:
|
|
| 11 |
dataset_summary: >-
|
| 12 |
AggregatorAdvisor identifies molecules that are known to aggregate or may aggregate in biochemical assays.
|
| 13 |
The approach is based on the chemical similarity to known aggregators, and physical properties.
|
| 14 |
-
|
|
|
|
|
|
|
| 15 |
citation: >-
|
| 16 |
@article
|
| 17 |
{Irwin2015, title = {An Aggregation Advisor for Ligand Discovery},
|
|
@@ -73,7 +75,7 @@ then, from within python load the datasets library
|
|
| 73 |
|
| 74 |
>>> import datasets
|
| 75 |
|
| 76 |
-
and load one of the `
|
| 77 |
|
| 78 |
>>> AggregatorAdvisor = datasets.load_dataset("maomlab/AggregatorAdvisor", name = "AggregatorAdvisor")
|
| 79 |
Downloading readme: 100%|██████████| 4.70k/4.70k [00:00<00:00, 277kB/s]
|
|
@@ -138,3 +140,6 @@ Split and evaluate the catboost model
|
|
| 138 |
predictions=preds["cat_boost_regressor::logP"])
|
| 139 |
|
| 140 |
## Citation
|
|
|
|
|
|
|
|
|
|
|
|
| 11 |
dataset_summary: >-
|
| 12 |
AggregatorAdvisor identifies molecules that are known to aggregate or may aggregate in biochemical assays.
|
| 13 |
The approach is based on the chemical similarity to known aggregators, and physical properties.
|
| 14 |
+
|
| 15 |
+
The train and test datasets uploaded to our Hugging Face repository have been sanitized and split from the original dataset, which contains 12645 compounds.
|
| 16 |
+
If you want to try these processes with the original dataset, please follow the instructions in the Processing Script.py[https://huggingface.co/datasets/maomlab/AggregatorAdvisor/blob/main/Preprocessing%20Script.py] file located in the AggregatorAdvisor.
|
| 17 |
citation: >-
|
| 18 |
@article
|
| 19 |
{Irwin2015, title = {An Aggregation Advisor for Ligand Discovery},
|
|
|
|
| 75 |
|
| 76 |
>>> import datasets
|
| 77 |
|
| 78 |
+
and load one of the `AggregatorAdvisor` datasets, e.g.,
|
| 79 |
|
| 80 |
>>> AggregatorAdvisor = datasets.load_dataset("maomlab/AggregatorAdvisor", name = "AggregatorAdvisor")
|
| 81 |
Downloading readme: 100%|██████████| 4.70k/4.70k [00:00<00:00, 277kB/s]
|
|
|
|
| 140 |
predictions=preds["cat_boost_regressor::logP"])
|
| 141 |
|
| 142 |
## Citation
|
| 143 |
+
J. Med. Chem. 2015, 58, 17, 7076–7087
|
| 144 |
+
Publication Date:August 21, 2015
|
| 145 |
+
https://doi.org/10.1021/acs.jmedchem.5b01105
|