Hani Park
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3195bbf
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23439aa
Added a column and checked column types in the summary file
Browse files- ChAFF_dataset_summary.csv +0 -119
ChAFF_dataset_summary.csv
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Type,DatasetName,AID,NumActiveCompounds,PaperTitle,Reference,URL,AssayName,Description,,,,,,,,,
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Absorbance,,632,43,A Novel Class of Small Molecule Inhibitors of Hsp90,"(Yi, 2008, 10.1021/cb800162x)",,Confirmation Concentration-Response Assay and Counterscreen for Disrupters of an Hsp90 Co-Chaperone Interaction,Interference compounds have a score of 10,,,,,,,,,
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Absorbance,,1641,92,Identification of Compounds That Interfere with High-Throughput Screening Assay Technologies,"(David, 2019, 10.1002/cmdc.201900395)",,TR-FRET counterscreen for FAK inhibitors: dose-response biochemical high throughput screening assay to identify inhibitors of Proline-rich tyrosine kinase 2 (Pyk2),TR-FRET counterscreen for FAK inhibitors,,,,,,,,,
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Absorbance,,1730,10,Identification of Compounds That Interfere with High-Throughput Screening Assay Technologies,"(David, 2019, 10.1002/cmdc.201900395)",,Counterscreen Assay for Inhibitors of the ERK Signaling Pathway using a Homogeneous Screening Assay,Counterscreen Assay for Inhibitors of the ERK Signaling Pathway using a Homogeneous Screening Assay,,,,,,,,,
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Absorbance,,1857,290,,,,FRET-based counterscreen assay for selective VIM-2 inhibitors: biochemical high throughput screening assay to identify epi-absorbance assay artifacts,FRET-based counterscreen assay to identify epi-absorbance assay artifacts,,,,,,,,,
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Absorbance,,1926,118,,,,FRET-based counterscreen for selective VIM-2 inhibitors: dose response biochemical high throughput screening assay to identify epi-absorbance assay artifacts.,FRET-based counterscreen assay to identify epi-absorbance assay artifacts,,,,,,,,,
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Absorbance,,435026,507,Identification of Compounds That Interfere with High-Throughput Screening Assay Technologies,"(David, 2019, 10.1002/cmdc.201900395)",,Fluorescence Cell-Free Homogeneous Counterscreen to Identify Inhibitors of the RanGTP-Importin-beta complex,fluorescence resonance energy transfer (FRET)-based biochemical assay used as counterscreen,,,,,,,,,
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Absorbance,,504689,59,Identification of Compounds That Interfere with High-Throughput Screening Assay Technologies,"(David, 2019, 10.1002/cmdc.201900395)",,Dose Response confirmation of UBC13 Polyubiquitin Inhibitors using a Bfl-1 counterscreen,uHTS identification of UBC13 Polyubiquitin Inhibitors via a TR-FRET Assay,,,,,,,,,
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Absorbance,,720541,416,Identification of Compounds That Interfere with High-Throughput Screening Assay Technologies,"(David, 2019, 10.1002/cmdc.201900395)",,qHTS for Inhibitors of the Phosphatase Activity of Eya2: Carboxyl-terminal binding protein (CtBP) Counterscreen for Cherry-picked Compounds,Carboxyl-terminal binding protein (CtBP) Counterscreen for Cherry-picked Compounds,,,,,,,,,
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Absorbance,,1159604,51,Identification of Compounds That Interfere with High-Throughput Screening Assay Technologies,"(David, 2019, 10.1002/cmdc.201900395)",,Counterscreen for inhibitors of ASK1: AlphaScreen-based biochemical high throughput dose response assay to identify inhibitors that optically interfere with alphascreen assays using TruHits beads,Counterscreen for inhibitors of ASK1: AlphaScreen-based biochemical high throughput dose response assay to identify inhibitors that optically interfere with alphascreen assays using TruHits beads,,,,,,,,,
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Artifact,transporter,,701,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,36844
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Artifact,transcription,,501,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,transcription_2,,1396,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,GPCR_2,,942,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,GPCR_3,,940,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,ion_channel,,175,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,ion_channel_2,,191,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,ion_channel_3,,383,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,kinase,,48,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,GPCR,,923,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,serine,,1150,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,transcription_3,,1119,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,ubiquitin,,853,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,splicing,,243,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,channel_atp,,548,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,cysteine_protease,,393,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Artifact,zinc_finger,,446,Machine Learning Assisted Hit Prioritization for High Throughput Screening in Drug Discovery,"(Boldini, 2024, 10.1021/acscentsci.3c01517)",https://github.com/dahvida/AIC_Finder,,One of Boldini2024 dataset which contains 17 different subdatasets.,,,,,,,,,
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Autofluoresence,,587,34,Fluorescence spectroscopic profiling of compound libraries,"(Simeonov, 2008, 10.1021/jm701301m)",,qHTS Assay for Spectroscopic Profiling in Texas Red Spectral Region,,,,,,,,,,
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Autofluoresence,,588,25,Fluorescence spectroscopic profiling of compound libraries,"(Simeonov, 2008, 10.1021/jm701301m)",,qHTS Assay for Spectroscopic Profiling in Resorufin Spectral Region,,,,,,,,,,
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Autofluoresence,,589,6214,Fluorescence spectroscopic profiling of compound libraries,"(Simeonov, 2008, 10.1021/jm701301m)",,qHTS Assay for Spectroscopic Profiling in 4-MU Spectral Region,,,,,,,,,,
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Autofluoresence,,590,6427,Fluorescence spectroscopic profiling of compound libraries,"(Simeonov, 2008, 10.1021/jm701301m)",,qHTS Assay for Spectroscopic Profiling in A350 Spectral Region,,,,,,,,,,
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Autofluoresence,,591,59,Fluorescence spectroscopic profiling of compound libraries,"(Simeonov, 2008, 10.1021/jm701301m)",,qHTS Assay for Spectroscopic Profiling in A488 Spectral Region,A488 Spectral Region; 480 nm and 540 nm excitation and emission,,,,,,,,,
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Autofluoresence,,592,0,Fluorescence spectroscopic profiling of compound libraries,"(Simeonov, 2008, 10.1021/jm701301m)",,qHTS Assay for Spectroscopic Profiling in A647 Spectral Region,,,,,,,,,,
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Autofluoresence,,593,532,Fluorescence spectroscopic profiling of compound libraries,"(Simeonov, 2008, 10.1021/jm701301m)",,qHTS Assay for Spectroscopic Profiling in Fluorescein Spectral Region,480 nm and 540 nm excitation and emission,,,,,,,,,
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Autofluoresence,,594,32,Fluorescence spectroscopic profiling of compound libraries,"(Simeonov, 2008, 10.1021/jm701301m)",,qHTS Assay for Spectroscopic Profiling in Rhodamine Spectral Region,,,,,,,,,,
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Autofluoresence,,709,3590,NA,,,Profiling the NIH Molecular Libraries Small Molecule Repository: Autofluorescence at 339/460 nm,"Autofluorescence at 339/460 nm; For fluorescent compounds, Dye equivalent concentration at given concentration > 10μm/ Fold Increase at 10μm; Blue non-fluorescent compounds need to be validated more than three times, while green non-fluorescent compounds should be validated more than five times.",,,,,,,,,
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Autofluoresence,,923,779,A small molecule inhibitor of Caspase 1,"(Boxer, 2010, https://www.ncbi.nlm.nih.gov/books/NBK56241/)",,qHTS Assay for Allosteric/Competitive Inhibitors of Caspase-1: Spectroscopic Profiling in AFC Spectral Region,405 nm excitation/520 nm emission,,,,,,,,,
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Autofluoresence,,1480,89,Title: Selective Efflux Inhibition of ATP-binding Cassette Sub-family G Member 2,"(Strouse, 2010, https://pubmed.ncbi.nlm.nih.gov/23658968/)",,Profiling compound fluorescence in IgMXP3 at 488/530 nm; counter screen to single point confirmation of ABCG2 screen,in IgMXP3 cells (ABCG2) 488/530 nm,,,,,,,,,
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Autofluoresence,,1483,83,Title: Selective Efflux Inhibition of ATP-binding Cassette Sub-family G Member 2,"(Strouse, 2010, https://pubmed.ncbi.nlm.nih.gov/23658968/)",,Profiling compound fluorescence in CCRF-Adr at 488/530 nm; counter screen to single point confirmation of ABCB1 screen,in CCRF-Adr (ABCB1 expressing cells) at 488/530 nm,,,,,,,,,
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Autofluoresence,,1696,342,"Identification of triazinoindol-benzimidazolones as nanomolar inhibitors of the Mycobacterium tuberculosis enzyme TDP-6-deoxy- D-xylo-4-hexopyranosid-4-ulose 3,5-epimerase (RmlC)","(Sivendran, 2010, 10.1016/j.bmc.2009.11.033)",,Rml C and D fluorescent artifact dose-response confirmation,340/460 nm,,,,,,,,,
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Autofluoresence,,1775,825,,,,Profiling compound fluorescence on Avidin Beads with 488 nm excitation and 530 nm emission,on Avidin Beads with 488 nm excitation and 530 nm emission,,,,,,,,,
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Autofluoresence,,1776,489,,,,Profiling compound fluorescence on GSH Beads with 488 nm excitation and 530 nm emission,on GSH Beads with 488 nm excitation and 530 nm emission,,,,,,,,,
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Autofluoresence,,2124,198,,,,Counterscreen for Fluorescence in GFP-Spectra Wavelengths Caused By Cell-Permeable Autofluorescent Compounds,488nm excitation / 535 nm emission,,,,,,,,,
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Autofluoresence,,2757,9,,,,Test compound autofluorescence in Saccharomyes cerevisiae specifically s288c,520 nm emission in Saccharomyes cerevisiae s288c,,,,,,,,,
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Autofluoresence,,588517,63,,,,Compound fluorescence counter screen for HTS for inhibitors of efflux pump with Cherry Pick1 compound set,488 nm excitation,,,,,,,,,
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Autofluoresence,,588620,13,,,,Dose response compound fluorescence counter screen for HTS for inhibitors of efflux pump with Hit compounds from Cherry Pick1,488 nm excitation,,,,,,,,,
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Autofluoresence,,624483,10930,,,,Counterscreen of compound fluorescence effects on High-throughput multiplex microsphere screening for inhibitors of toxin protease,Spherotech Blue Array Particle kit,,,,,,,,,
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Autofluoresence,,720675,21,,,,qHTS assay to test for compound auto fluorescence at 535 nm (green) in HepG2 cells,535 nm (green) in HepG2 cells,,,,,,,,,
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Autofluoresence,,720678,35,,,,qHTS assay to test for compound auto fluorescence at 460 nm (blue) in HEK293 cells,460 nm (blue) in HEK293 cells,,,,,,,,,
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Autofluoresence,,720680,13,,,,qHTS assay to test for compound auto fluorescence at 535 nm (green) in HEK293 cells,535 nm (green) in HEK293 cells,,,,,,,,,
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Autofluoresence,,720681,37,,,,qHTS assay to test for compound auto fluorescence at 460 nm (blue) in HEK293 cell free culture,460 nm (blue) in HEK293 cell,,,,,,,,,
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Autofluoresence,,720682,13,,,,qHTS assay to test for compound auto fluorescence at 535 nm (green) in HEK293 cell free culture,535 nm (green) in HEK293 cell,,,,,,,,,
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Autofluoresence,,720686,20,,,,qHTS assay to test for compound auto fluorescence at 535 nm (green) in HepG2 cell free culture,535 nm (green) in HepG2 cell,,,,,,,,,
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Autofluoresence,,720687,32,,,,qHTS assay to test for compound auto fluorescence at 460 nm (blue) in HepG2 cells,460 nm (blue) in HepG2 cells,,,,,,,,,
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Autofluoresence,hepg2_cell_blue_n,,216,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hepg2-p dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hepg2_cell_green_n,,80,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hepg2-p dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hepg2_cell_red_n,,39,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hepg2-p dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hepg2_med_blue_n,,209,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hepg2-p dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hepg2_med_green_n,,80,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hepg2-p dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hepg2_med_red_n,,37,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hepg2-p dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hek293_cell_blue_n,,210,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hek293-p1 dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hek293_cell_green_n,,56,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hek293-p1 dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hek293_cell_red_n,,33,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hek293-p1 dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hek293_med_blue_n,,224,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hek293-p1 dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hek293_med_green_n,,44,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hek293-p1 dataset which contains 6 different subdatasets.,,,,,,,,,
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Autofluoresence,hek293_med_red_n,,34,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,One of tox21-spec-hek293-p1 dataset which contains 6 different subdatasets.,,,,,,,,,
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ColloidalAggregators,,585,1256,"SCAM Detective: Accurate Predictor of Small, Colloidally Aggregating Molecules","(Alves, 2020, 10.1021/acs.jcim.0c00415)",https://scamdetective.mml.unc.edu/,Promiscuous and Specific Inhibitors of AmpC Beta-Lactamase (assay without detergent),,,,,,,,,,
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ColloidalAggregators,,1476,4500,"Quantitative analyses of aggregation, autofluorescence, and reactivity artifacts in a screen for inhibitors of a thiol protease","(Jadhav, 2010, 10.1021/jm901070c)",,qHTS Assay for Promiscuous and Specific Inhibitors of Cruzain (without detergent),Inhibitors of Cruzain (without detergent),,,,,,,,,
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ColloidalAggregators,,485341,1730,"SCAM Detective: Accurate Predictor of Small, Colloidally Aggregating Molecules","(Alves, 2020, 10.1021/acs.jcim.0c00415)",https://scamdetective.mml.unc.edu/,qHTS Inhibitors of AmpC Beta-Lactamase (assay without detergent),qHTS Inhibitors of AmpC Beta-Lactamase (assay without detergent),,,,,,,,,
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ColloidalAggregators,AggregatorAdvisor,,12644,An Aggregation Advisor for Ligand Discovery,"(Irwin, 2015, 10.1021/acs.jmedchem.5b01105)",https://advisor.bkslab.org/,,20 diverse sources,,,,,,,,,
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HeavyHitters,Matlock2018,,13068,Modeling Small-Molecule Reactivity Identifies Promiscuous Bioactive Compounds,"(Matlock, 2018, 10.1021/acs.jcim.8b00104)",https://pubs.acs.org/doi/suppl/10.1021/acs.jcim.8b00104/suppl_file/ci8b00104_si_001.zip,,"PubChem2016, non-ChEMBL tested in at least 100 assays",,,,,,,,,
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HeavyHitters,Goodwin2020,,1000,Statistical models for identifying frequent hitters in high throughput screening,"(Goodwin, 2020, 10.1038/s41598-020-74139-0)",https://www.nature.com/articles/s41598-020-74139-0#Sec20,,,,,,,,,,,
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HeavyHitters,Aggregators,,16820,,"(Shi, 2024, 10.1093/nar/gkae424)",,,One of Shi2024 dataset which contains seven different subdatasets.,,,,,,,,,
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HeavyHitters,Green_fluorescence,,8441,,"(Shi, 2024, 10.1093/nar/gkae424)",,,One of Shi2024 dataset which contains seven different subdatasets.,,,,,,,,,
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HeavyHitters,Fluc_inhibitors,,12092,,"(Shi, 2024, 10.1093/nar/gkae424)",,,One of Shi2024 dataset which contains seven different subdatasets.,,,,,,,,,
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HeavyHitters,Blue_fluorescence,,4871,,"(Shi, 2024, 10.1093/nar/gkae424)",,,One of Shi2024 dataset which contains seven different subdatasets.,,,,,,,,,
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HeavyHitters,Reactive_compounds,,6056,,"(Shi, 2024, 10.1093/nar/gkae424)",,,One of Shi2024 dataset which contains seven different subdatasets.,,,,,,,,,
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HeavyHitters,Promiscuous_compounds,,8089,,"(Shi, 2024, 10.1093/nar/gkae424)",,,One of Shi2024 dataset which contains seven different subdatasets.,,,,,,,,,
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HeavyHitters,Other_assay_interference,,1544,,"(Shi, 2024, 10.1093/nar/gkae424)",,,One of Shi2024 dataset which contains seven different subdatasets.,,,,,,,,,
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LuciferaseInhibition,,411,1571,Characterization of chemical libraries for luciferase inhibitory activity,"(Auld, 2008, 10.1021/jm701302v)",,qHTS Assay for Inhibitors of Firefly Luciferase,ATP concentration in the assay (10 uM),,,,,,,,,
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LuciferaseInhibition,,1006,"2,976",Characterization of chemical libraries for luciferase inhibitory activity,"(Auld, 2008, 10.1021/jm701302v)",,Counter Screen for Luciferase-based Primary Inhibition Assays,with >50% inhibition at 10 uM concentration,,,,,,,,,
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LuciferaseInhibition,,1379,565,A basis for reduced chemical library inhibition of firefly luciferase obtained from directed evolution,"(Auld, 2009, 10.1021/jm8014525)",,Counterscreen for Luciferase (Kinase-Glo TM) Inhibition,,,,,,,,,,
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LuciferaseInhibition,,1891,446,,,,Luminescence Biochemical Dose Response HTS to Identify Inhibitors of Luciferase,EC50 <= 1 log over the highest tested concentration,,,,,,,,,
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LuciferaseInhibition,,2515,10,,,,Counterscreen Assay for Enhancers of SMN2 Splice Variant Expression: Interaction with Luciferase Reporter for Probe SAR,NIH Chemical Genomics Center (NCGC) Assay,,,,,,,,,
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LuciferaseInhibition,,2530,46,,,,Secondary Assay for Luciferase (Kinase-Glo TM) Inhibition Counterscreen,,,,,,,,,,
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LuciferaseInhibition,,366887,8,,,,Inhibition of luciferin binding site of Photinus pyralis luciferase by noncompetitive inhibition assay,activity <= 10uM,,,,,,,,,
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LuciferaseInhibition,,366889,1,,,,Inhibition of Photinus pyralis luciferase assessed as maximum inhibitory potency by quantitative high throughput screening,activity <= 10uM,,,,,,,,,
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LuciferaseInhibition,,366891,19,,,,Inhibition of luciferin binding site of Photinus pyralis luciferase by competitive inhibition assay,activity <= 10uM,,,,,,,,,
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LuciferaseInhibition,,488838,41,,,,Counterscreen Assay for Enhancers of SMN2 Splice Variant Expression: Interaction with Luciferase Reporter for Further Probe SAR,,,,,,,,,,
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LuciferaseInhibition,,493175,0,,,,miR-21 counterscreen using purified firefly luciferase,,,,,,,,,,
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LuciferaseInhibition,,588342,25069,"Firefly luciferase in chemical biology: a compendium ofinhibitors, mechanistic evaluation of chemotypes, and suggested use as areporter.","(Thorne, 2012, 10.1016/j.chembiol.2012.07.015)",,qHTS profiling assay for firefly luciferase inhibitor/activator using purifed enzyme and Km concentrations of substrates (counterscreen for miR-21 project),,,,,,,,,,
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LuciferaseInhibition,,588498,18,,,,qHTS profiling assay for firefly luciferase inhibitor/activator using purifed enzyme and Km concentrations of substrates (counterscreen for the Campaign to Identify EBNA-1 Inhibitors project).,,,,,,,,,,
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LuciferaseInhibition,,602357,104,,,,FLuc inhibitory activity for the follow-up compounds in a biochemical assay with Km concentrations of substrate,,,,,,,,,,
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LuciferaseInhibition,,602358,102,,,,FLuc inhibitory activity for the follow-up compounds in a biochemical assay with Km concentrations of substrate and 500microM CoASH,,,,,,,,,,
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| 95 |
-
LuciferaseInhibition,,602364,89,,,,FLuc inhibitory activity for the follow-up compounds in a biochemical assay with 1mM ATP,,,,,,,,,,
|
| 96 |
-
LuciferaseInhibition,,602474,53,,,,FLuc inhibitory activity for the follow-up compounds in a biochemical assay with a commercial detection reagent - BriteliteTM Plus (PerkinElmer),,,,,,,,,,
|
| 97 |
-
LuciferaseInhibition,,602475,36,,,,FLuc inhibitory activity for the follow-up compounds in a biochemical assay with an in-house formulation of detection reagent,,,,,,,,,,
|
| 98 |
-
LuciferaseInhibition,,602476,31,,,,FLuc inhibitory activity for the follow-up compounds in a cell-based translational read-through assay,,,,,,,,,,
|
| 99 |
-
LuciferaseInhibition,,602477,87,,,,FLuc inhibitory activity for the follow-up compounds in a cell-based assay to assess the activity of miR-21,,,,,,,,,,
|
| 100 |
-
LuciferaseInhibition,,624030,104,,,,Biochemical firefly luciferase enzyme assay for NPC,,,,,,,,,,
|
| 101 |
-
LuciferaseInhibition,,652016,35,,,,qHTS Assay for Inhibitors of Firefly Luciferase from the GSK Published Protein Kinase Inhibitor Set,,,,,,,,,,
|
| 102 |
-
LuciferaseInhibition,,720522,58,,,,Nrf2 qHTS screen for inhibitors: Purified Fluc Biochemical Counterscreen for Hit Validation,,,,,,,,,,
|
| 103 |
-
LuciferaseInhibition,,720835,31,,,,GSK_PKIS: Inhibition of Firefly Luciferase (Data from PubChem: AID 652016) [NIH NCATS],activity <= 10uM,,,,,,,,,
|
| 104 |
-
LuciferaseInhibition,,1224835,712,,,,qHTS assay to identify small molecule inhibitors of firefly luciferase,,,,,,,,,,
|
| 105 |
-
LuciferaseInhibition,,1347047,10,,,,Natriuretic polypeptide receptor (hNpr1) antagonism - Confirmation firefly luciferase (FLuc) inhibition counterscreen,,,,,,,,,,
|
| 106 |
-
LuciferaseInhibition,Firefly_Luciferase,,94,Lies and Liabilities: Computational Assessment of High-Throughput Screening Hits to Identify Artifact Compounds,"(Alves, 2023, 10.1021/acs.jmedchem.3c00482)",https://liability.mml.unc.edu/,,,,,,,,,,,
|
| 107 |
-
LuciferaseInhibition,Nano_Luciferase,,84,Lies and Liabilities: Computational Assessment of High-Throughput Screening Hits to Identify Artifact Compounds,"(Alves, 2023, 10.1021/acs.jmedchem.3c00482)",https://liability.mml.unc.edu/,,,,,,,,,,,
|
| 108 |
-
LuciferaseInhibition,Luc_IC50,,551,High-Throughput Screening to Predict Chemical-Assay Interference,"(Borrel, 2020, 10.1038/s41598-020-60747-3)",https://www.nature.com/articles/s41598-020-60747-3#Sec29,,,,,,,,,,,
|
| 109 |
-
Misannotation,Bisson2016,,39,Can Invalid Bioactives Undermine Natural Product-Based Drug Discovery?,"(Bisson, 2016, 10.1021/acs.jmedchem.5b01009)",,,"metabolites entered into NAPRALERT in the top 20 for occurances, activities, and distinct activities",,,,,,,,,
|
| 110 |
-
Reactivity,,672,4,Development and Implementation of a 384-WellHomogeneous Fluorescence Intensity High-ThroughputScreening Assay to Identify Mitogen-Activated Protein KinasePhosphatase-1 Dual-Specificity Protein Phosphatase Inhibitors,"(Johnston, 2007, 10.1089/adt.2007.066)",,Redox Cycling Hydrogen Peroxide Generation Assay; MKP-1 and MKP-3 Probe Assessment.,Redox Cycling Hydrogen Peroxide Generation Assay,,,,,,,,,
|
| 111 |
-
Reactivity,,682,13,Cdc25B Dual-Specificity Phosphatase Inhibitors Identified in a High-Throughput Screen of the NIH Compound Library,"(Johnston, 2010, 10.1089/adt.2008.186)",,Cdc25B Catalytic Domain Protein Tyrosine Phosphatase Probe Assessment: Compound Dose Dependent Redox Cycling H2O2 Generation in 0.5 mM DTT,Redox Cycling H2O2 Generation Assay,,,,,,,,,
|
| 112 |
-
Reactivity,,936,2,NA,,,"Concentration Response Redox Cycling H2O2 Generation assay, 1 mM DTT, to characterize small molecule inhibitors identified in the Polo box domain (PBD) of Plk1 Primary HTS",Redox Cycling H2O2 Generation assay,,,,,,,,,
|
| 113 |
-
Reactivity,Thiol_training_set,,905,Lies and Liabilities: Computational Assessment of High-Throughput Screening Hits to Identify Artifact Compounds,"(Alves, 2023, 10.1021/acs.jmedchem.3c00482)",https://liability.mml.unc.edu/,,,,,,,,,,,
|
| 114 |
-
Reactivity,Tox21_MSTI,,2183,Evaluating the utility of a high throughput thiol-containing fluorescent probe to screen for reactivity: A case study with the Tox21 library,"(Patlewicz, 2023, 10.1016/j.comtox.2023.100271)",https://clowder.edap-cluster.com/files/64357989e4b08a6b393f7bd1?dataset=61147fefe4b0856fdc65639b&space=&folder=6435797ae4b08a6b393f7bcd,,,,,,,,,,,
|
| 115 |
-
REDOX,,878,64,Profiling the NIH Small Molecule Repository for compounds that generate H2O2 by redox cycling in reducing environments,"(Soares, 2010, 10.1089/adt.2009.0247)",,NIH Compound Library Profiling: Compound and DTT Dependent Redox Cycling H2O2 Generation,colorimetric assay to detect measure H2O2 generated by the redox cycling of compounds incubated with reducing agents applied to the LOPAC Library,,,,,,,,,
|
| 116 |
-
REDOX,,888,3,A small molecule inhibitor of Caspase 1,"(Boxer, 2010, https://www.ncbi.nlm.nih.gov/books/NBK56241/)",,Concentration-Response Counterscreen for Redox Active Inhibitors of Caspase-1: Catalase,,,,,,,,,,
|
| 117 |
-
REDOX,,929,2,A small molecule inhibitor of Caspase 1,"(Boxer, 2010, https://www.ncbi.nlm.nih.gov/books/NBK56241/)",,Concentration-Response Counterscreen for Redox Active Inhibitors of Caspase-1: Cysteine,,,,,,,,,,
|
| 118 |
-
REDOX,,1234,24,Profiling the NIH Small Molecule Repository for compounds that generate H2O2 by redox cycling in reducing environments,"(Soares, 2010, 10.1089/adt.2009.0247)",,NIH Compound Library Profiling: Compound and DTT Dependent Redox Cycling H2O2 Generation 10-point Concentration Response Confirmation Assay,colorimetric assay to detect measure H2O2 generated by the redox cycling of compounds incubated with reducing agents applied to the NIH SMR library,,,,,,,,,
|
| 119 |
-
REDOX,Redox_training_set,,124,Lies and Liabilities: Computational Assessment of High-Throughput Screening Hits to Identify Artifact Compounds,"(Alves, 2023, 10.1021/acs.jmedchem.3c00482)",https://liability.mml.unc.edu/,,,,,,,,,,,
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