model_and_lightning_module.py

"""
Modules for roof segmentation.
"""
from pathlib import Path
from typing import Any, Callable, Dict, Optional, Tuple

import albumentations as A
import cv2
import numpy as np
import pytorch_lightning as pl
import torch
import torch.nn as nn
import torch.nn.functional as F
from albumentations.pytorch import ToTensorV2
from torch.utils.data import Dataset


class DoubleConv(nn.Module):
    """Double convolution block: (conv => BN => ReLU) * 2"""
    
    def __init__(self, in_channels, out_channels):
        super().__init__()
        self.double_conv = nn.Sequential(
            nn.Conv2d(in_channels, out_channels, kernel_size=3, padding=1),
            nn.BatchNorm2d(out_channels),
            nn.ReLU(inplace=True),
            nn.Conv2d(out_channels, out_channels, kernel_size=3, padding=1),
            nn.BatchNorm2d(out_channels),
            nn.ReLU(inplace=True)
        )
    
    def forward(self, x):
        return self.double_conv(x)


class Down(nn.Module):
    """Downscaling with maxpool then double conv"""
    
    def __init__(self, in_channels, out_channels):
        super().__init__()
        self.maxpool_conv = nn.Sequential(
            nn.MaxPool2d(2),
            DoubleConv(in_channels, out_channels)
        )
    
    def forward(self, x):
        return self.maxpool_conv(x)


class Up(nn.Module):
    """Upscaling then double conv"""
    
    def __init__(self, in_channels, out_channels, bilinear=True):
        super().__init__()
        
        # Use bilinear upsampling or transpose convolution
        if bilinear:
            self.up = nn.Upsample(scale_factor=2, mode='bilinear', align_corners=True)
            self.conv = DoubleConv(in_channels, out_channels)
        else:
            self.up = nn.ConvTranspose2d(in_channels, in_channels // 2, kernel_size=2, stride=2)
            self.conv = DoubleConv(in_channels, out_channels)
    
    def forward(self, x1, x2):
        x1 = self.up(x1)
        
        # Input is CHW
        diffY = x2.size()[2] - x1.size()[2]
        diffX = x2.size()[3] - x1.size()[3]
        
        x1 = F.pad(x1, [diffX // 2, diffX - diffX // 2,
                        diffY // 2, diffY - diffY // 2])
        
        # Concatenate along channel dimension
        x = torch.cat([x2, x1], dim=1)
        return self.conv(x)


class OutConv(nn.Module):
    """Output convolution"""
    
    def __init__(self, in_channels, out_channels):
        super().__init__()
        self.conv = nn.Conv2d(in_channels, out_channels, kernel_size=1)
    
    def forward(self, x):
        return self.conv(x)


class UNet(nn.Module):
    """Simple U-Net implementation with configurable base channels"""
    
    def __init__(self, n_channels=3, n_classes=1, base_channels=32, bilinear=True):
        super().__init__()
        self.n_channels = n_channels
        self.n_classes = n_classes
        self.bilinear = bilinear
        
        # Use configurable base channels (default 32 instead of 64)
        c = base_channels
        
        # Encoder (downsampling path)
        self.inc = DoubleConv(n_channels, c)
        self.down1 = Down(c, c*2)
        self.down2 = Down(c*2, c*4)
        self.down3 = Down(c*4, c*8)
        factor = 2 if bilinear else 1
        self.down4 = Down(c*8, c*16 // factor)
        
        # Decoder (upsampling path)
        self.up1 = Up(c*16, c*8 // factor, bilinear)
        self.up2 = Up(c*8, c*4 // factor, bilinear)
        self.up3 = Up(c*4, c*2 // factor, bilinear)
        self.up4 = Up(c*2, c, bilinear)
        self.outc = OutConv(c, n_classes)
    
    def forward(self, x):
        # Encoder
        x1 = self.inc(x)
        x2 = self.down1(x1)
        x3 = self.down2(x2)
        x4 = self.down3(x3)
        x5 = self.down4(x4)
        
        # Decoder with skip connections
        x = self.up1(x5, x4)
        x = self.up2(x, x3)
        x = self.up3(x, x2)
        x = self.up4(x, x1)
        logits = self.outc(x)
        return logits


def get_unet_model(n_channels=3, n_classes=1, base_channels=32, bilinear=True):
    """
    Create a U-Net model.
    
    Args:
        n_channels: Number of input channels
        n_classes: Number of output classes
        base_channels: Base number of channels (32 = lighter, 64 = standard)
        bilinear: Use bilinear upsampling
    """
    return UNet(n_channels=n_channels, n_classes=n_classes, base_channels=base_channels, bilinear=bilinear)


class SegmentationLightningModule(pl.LightningModule):
    def __init__(self, config: Dict[str, Any]):
        super().__init__()
        self.model = get_unet_model(
            n_channels=config["in_channels"],
            n_classes=config["classes"],
            base_channels=config.get("base_channels", 32),
            bilinear=config.get("bilinear", True)
        )

    def forward(self, x):
        return self.model(x)


class RoofSegmentationDataset(Dataset):
    """Dataset for roof segmentation with images and masks."""
    
    def __init__(
        self,
        images_dir: Path,
        masks_dir: Path,
        transform: Optional[Callable] = None,
        image_size: Tuple[int, int] = (512, 512)
    ):
        """
        Args:
            images_dir: Directory containing input images
            masks_dir: Directory containing segmentation masks
            transform: Albumentations transforms to apply
            image_size: Target size for images (height, width)
        """
        self.images_dir = Path(images_dir)
        self.masks_dir = Path(masks_dir)
        self.image_size = image_size
        self.transform = transform
        
        # Get all image files
        self.image_files = []
        for ext in ['.jpg', '.jpeg', '.png', '.tiff', '.tif']:
            self.image_files.extend(self.images_dir.glob(f'*{ext}'))
            self.image_files.extend(self.images_dir.glob(f'*{ext.upper()}'))
        
        self.image_files = sorted(self.image_files)
        
        # Verify that corresponding masks exist
        self.valid_pairs = []
        for image_path in self.image_files:
            mask_candidates = []
            for ext in ['.jpg', '.jpeg', '.png', '.tiff', '.tif']:
                mask_path = self.masks_dir / f"{image_path.stem}{ext}"
                if mask_path.exists():
                    mask_candidates.append(mask_path)
            
            if mask_candidates:
                self.valid_pairs.append((image_path, mask_candidates[0]))
        
        print(f"Dataset initialized with {len(self.valid_pairs)} image-mask pairs")
    
    def __len__(self) -> int:
        return len(self.valid_pairs)
    
    def __getitem__(self, idx: int) -> dict:
        image_path, mask_path = self.valid_pairs[idx]
        
        # Load image
        image = cv2.imread(str(image_path))
        image = cv2.cvtColor(image, cv2.COLOR_BGR2RGB)
        
        # Load mask
        mask = cv2.imread(str(mask_path), cv2.IMREAD_GRAYSCALE)
        
        # Resize to target size
        image = cv2.resize(image, self.image_size)
        mask = cv2.resize(mask, self.image_size, interpolation=cv2.INTER_NEAREST)
        
        # Normalize mask to 0-1 (assuming binary segmentation)
        mask = (mask > 127).astype(np.uint8)
        
        # Apply transforms
        if self.transform:
            transformed = self.transform(image=image, mask=mask)
            image = transformed['image']
            mask = transformed['mask']
            
            # Ensure mask is float for loss calculations
            if isinstance(mask, torch.Tensor):
                mask = mask.float()
        else:
            # Convert to tensors manually if no transforms
            image = torch.from_numpy(image.transpose(2, 0, 1)).float()
            mask = torch.from_numpy(mask).float()
        
        return {
            'image': image,
            'mask': mask,
            'image_path': str(image_path),
            'mask_path': str(mask_path)
        }


def get_training_transforms(image_size: Tuple[int, int] = (512, 512)) -> A.Compose:
    """Get augmentation transforms for training."""
    return A.Compose([
        A.HorizontalFlip(p=0.5),
        A.VerticalFlip(p=0.5),
        A.RandomRotate90(p=0.5),
        A.ShiftScaleRotate(
            shift_limit=0.1,
            scale_limit=0.2,
            rotate_limit=45,
            border_mode=cv2.BORDER_CONSTANT,
            value=0,
            p=0.5
        ),
        A.OneOf([
            A.RandomBrightnessContrast(brightness_limit=0.2, contrast_limit=0.2, p=1.0),
            A.HueSaturationValue(hue_shift_limit=20, sat_shift_limit=30, val_shift_limit=20, p=1.0),
        ], p=0.5),
        A.OneOf([
            A.GaussianBlur(blur_limit=(3, 7), p=1.0),
            A.MedianBlur(blur_limit=5, p=1.0),
        ], p=0.3),
        A.Resize(image_size[0], image_size[1]),
        A.Normalize(
            mean=[0.485, 0.456, 0.406],
            std=[0.229, 0.224, 0.225]
        ),
        ToTensorV2()
    ])


def get_validation_transforms(image_size: Tuple[int, int] = (512, 512)) -> A.Compose:
    """Get transforms for validation (no augmentation)."""
    return A.Compose([
        A.Resize(image_size[0], image_size[1]),
        A.Normalize(
            mean=[0.485, 0.456, 0.406],
            std=[0.229, 0.224, 0.225]
        ),
        ToTensorV2()
    ])


def create_dataloaders(
    train_images_dir: Path,
    train_masks_dir: Path,
    val_images_dir: Path,
    val_masks_dir: Path,
    batch_size: int = 8,
    num_workers: int = 4,
    image_size: Tuple[int, int] = (512, 512)
) -> Tuple[torch.utils.data.DataLoader, torch.utils.data.DataLoader]:
    """Create training and validation dataloaders."""
    
    # Create datasets
    train_dataset = RoofSegmentationDataset(
        images_dir=train_images_dir,
        masks_dir=train_masks_dir,
        transform=get_training_transforms(image_size),
        image_size=image_size
    )
    
    val_dataset = RoofSegmentationDataset(
        images_dir=val_images_dir,
        masks_dir=val_masks_dir,
        transform=get_validation_transforms(image_size),
        image_size=image_size
    )
    
    # Create dataloaders
    train_loader = torch.utils.data.DataLoader(
        train_dataset,
        batch_size=batch_size,
        shuffle=True,
        num_workers=num_workers,
        pin_memory=True,
        drop_last=True
    )
    
    val_loader = torch.utils.data.DataLoader(
        val_dataset,
        batch_size=batch_size,
        shuffle=False,
        num_workers=num_workers,
        pin_memory=True
    )
    
    return train_loader, val_loader