#!/usr/bin/env python3 """ Create JSON file for ACDC QC software with patient folder paths as keys """ import json from pathlib import Path def create_acdc_json(): # Base directory for ACDC data (output of rename_acdc_specific.py) base_dir = Path("/mnt/storage/home/ym1413/QC_data_preprocessing/sabotaged_dataset") # Create dictionary with patient folders as keys acdc_data = {} # Get all patient directories patient_dirs = sorted([d for d in base_dir.iterdir() if d.is_dir() and d.name.startswith('patient')]) for patient_dir in patient_dirs: # Remove base path /mnt/storage/home/ym1413 from the key key = str(patient_dir).replace("/mnt/storage/home/ym1413", "") # Extract patient ID from folder name patient_id = patient_dir.name # Create entry for this patient - just the key with empty dict for QC software to populate acdc_data[key] = {} # Save to JSON file output_file = Path("/mnt/storage/home/ym1413/QC_data_preprocessing/acdc_qc_dataset.json") with open(output_file, 'w') as f: json.dump(acdc_data, f, indent=4, sort_keys=True) print(f"Created JSON file with {len(acdc_data)} patient entries") print(f"Output saved to: {output_file}") # Show first few entries as preview print("\nFirst 3 entries:") for i, key in enumerate(list(acdc_data.keys())[:3]): print(f"\nEntry {i+1}:") print(f" Key: {key}") if __name__ == "__main__": create_acdc_json()