Robert Azarcon commited on
Commit
08672eb
·
1 Parent(s): 1f9978b

colmap for 03_08_2026 scan

Browse files
scans/03_08_2026/colmap/database.db ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:72432343fd6204221d5e3b6aef363878ebad63a248c49287f0ae306c20fab41d
3
+ size 53743616
scans/03_08_2026/colmap/project.ini ADDED
@@ -0,0 +1,209 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ log_to_stderr=true
2
+ random_seed=0
3
+ log_level=0
4
+ database_path=/home/codaero/Projects/Microscopic-3D-Reconstruction/microscope-data/scans/03_08_2026/colmap/database.db
5
+ image_path=/home/codaero/Projects/Microscopic-3D-Reconstruction/microscope-data/scans/03_08_2026/focus_stacked
6
+ [ImageReader]
7
+ single_camera=false
8
+ single_camera_per_folder=false
9
+ single_camera_per_image=false
10
+ existing_camera_id=-1
11
+ default_focal_length_factor=1.2
12
+ mask_path=
13
+ camera_model=SIMPLE_RADIAL
14
+ camera_params=
15
+ camera_mask_path=
16
+ [SiftExtraction]
17
+ use_gpu=true
18
+ estimate_affine_shape=false
19
+ upright=false
20
+ domain_size_pooling=false
21
+ num_threads=-1
22
+ max_image_size=3200
23
+ max_num_features=8192
24
+ first_octave=-1
25
+ num_octaves=4
26
+ octave_resolution=3
27
+ max_num_orientations=2
28
+ dsp_num_scales=10
29
+ peak_threshold=0.0066666666666666671
30
+ edge_threshold=10
31
+ dsp_min_scale=0.16666666666666666
32
+ dsp_max_scale=3
33
+ gpu_index=-1
34
+ [SiftMatching]
35
+ use_gpu=true
36
+ cross_check=true
37
+ guided_matching=false
38
+ num_threads=-1
39
+ max_num_matches=32768
40
+ max_ratio=0.80000000000000004
41
+ max_distance=0.69999999999999996
42
+ gpu_index=-1
43
+ [TwoViewGeometry]
44
+ multiple_models=false
45
+ compute_relative_pose=false
46
+ min_num_inliers=15
47
+ max_num_trials=10000
48
+ max_error=4
49
+ confidence=0.999
50
+ min_inlier_ratio=0.25
51
+ [SequentialMatching]
52
+ quadratic_overlap=true
53
+ loop_detection=false
54
+ overlap=10
55
+ loop_detection_period=10
56
+ loop_detection_num_images=50
57
+ loop_detection_num_nearest_neighbors=1
58
+ loop_detection_num_checks=256
59
+ loop_detection_num_images_after_verification=0
60
+ loop_detection_max_num_features=-1
61
+ vocab_tree_path=
62
+ [SpatialMatching]
63
+ is_gps=true
64
+ ignore_z=true
65
+ max_num_neighbors=50
66
+ max_distance=100
67
+ [BundleAdjustment]
68
+ refine_focal_length=true
69
+ refine_principal_point=false
70
+ refine_extra_params=true
71
+ refine_extrinsics=true
72
+ max_num_iterations=100
73
+ max_linear_solver_iterations=200
74
+ function_tolerance=0
75
+ gradient_tolerance=0
76
+ parameter_tolerance=0
77
+ [Mapper]
78
+ ignore_watermarks=false
79
+ multiple_models=true
80
+ extract_colors=true
81
+ ba_refine_focal_length=true
82
+ ba_refine_principal_point=false
83
+ ba_refine_extra_params=true
84
+ fix_existing_images=false
85
+ tri_ignore_two_view_tracks=true
86
+ min_num_matches=15
87
+ max_num_models=50
88
+ max_model_overlap=20
89
+ min_model_size=10
90
+ init_image_id1=-1
91
+ init_image_id2=-1
92
+ init_num_trials=200
93
+ num_threads=-1
94
+ ba_min_num_residuals_for_multi_threading=50000
95
+ ba_local_num_images=6
96
+ ba_local_max_num_iterations=25
97
+ ba_global_images_freq=500
98
+ ba_global_points_freq=250000
99
+ ba_global_max_num_iterations=50
100
+ ba_global_max_refinements=5
101
+ ba_local_max_refinements=2
102
+ snapshot_images_freq=0
103
+ init_min_num_inliers=100
104
+ init_max_reg_trials=2
105
+ abs_pose_min_num_inliers=30
106
+ max_reg_trials=3
107
+ tri_max_transitivity=1
108
+ tri_complete_max_transitivity=5
109
+ tri_re_max_trials=1
110
+ min_focal_length_ratio=0.10000000000000001
111
+ max_focal_length_ratio=10
112
+ max_extra_param=1
113
+ ba_local_function_tolerance=0
114
+ ba_global_images_ratio=1.1000000000000001
115
+ ba_global_points_ratio=1.1000000000000001
116
+ ba_global_function_tolerance=0
117
+ ba_global_max_refinement_change=0.00050000000000000001
118
+ ba_local_max_refinement_change=0.001
119
+ init_max_error=4
120
+ init_max_forward_motion=0.94999999999999996
121
+ init_min_tri_angle=16
122
+ abs_pose_max_error=12
123
+ abs_pose_min_inlier_ratio=0.25
124
+ filter_max_reproj_error=4
125
+ filter_min_tri_angle=1.5
126
+ local_ba_min_tri_angle=6
127
+ tri_create_max_angle_error=2
128
+ tri_continue_max_angle_error=2
129
+ tri_merge_max_reproj_error=4
130
+ tri_complete_max_reproj_error=4
131
+ tri_re_max_angle_error=5
132
+ tri_re_min_ratio=0.20000000000000001
133
+ tri_min_angle=1.5
134
+ snapshot_path=
135
+ [PatchMatchStereo]
136
+ geom_consistency=true
137
+ filter=true
138
+ allow_missing_files=false
139
+ write_consistency_graph=false
140
+ max_image_size=2000
141
+ window_radius=5
142
+ window_step=1
143
+ num_samples=15
144
+ num_iterations=5
145
+ filter_min_num_consistent=2
146
+ depth_min=-1
147
+ depth_max=-1
148
+ sigma_spatial=-1
149
+ sigma_color=0.20000000298023224
150
+ ncc_sigma=0.60000002384185791
151
+ min_triangulation_angle=1
152
+ incident_angle_sigma=0.89999997615814209
153
+ geom_consistency_regularizer=0.30000001192092896
154
+ geom_consistency_max_cost=3
155
+ filter_min_ncc=0.10000000149011612
156
+ filter_min_triangulation_angle=3
157
+ filter_geom_consistency_max_cost=1
158
+ cache_size=32
159
+ gpu_index=-1
160
+ [StereoFusion]
161
+ use_cache=false
162
+ num_threads=-1
163
+ max_image_size=-1
164
+ min_num_pixels=5
165
+ max_num_pixels=10000
166
+ max_traversal_depth=100
167
+ check_num_images=50
168
+ max_reproj_error=2
169
+ max_depth_error=0.0099999997764825821
170
+ max_normal_error=10
171
+ cache_size=32
172
+ mask_path=
173
+ [Render]
174
+ adapt_refresh_rate=true
175
+ image_connections=false
176
+ min_track_len=3
177
+ refresh_rate=1
178
+ projection_type=0
179
+ max_error=2
180
+ [ExhaustiveMatching]
181
+ block_size=50
182
+ [VocabTreeMatching]
183
+ num_images=100
184
+ num_nearest_neighbors=5
185
+ num_checks=256
186
+ num_images_after_verification=0
187
+ max_num_features=-1
188
+ vocab_tree_path=
189
+ match_list_path=
190
+ [TransitiveMatching]
191
+ batch_size=1000
192
+ num_iterations=3
193
+ [ImagePairsMatching]
194
+ block_size=1225
195
+ [PoissonMeshing]
196
+ depth=13
197
+ num_threads=-1
198
+ point_weight=1
199
+ color=32
200
+ trim=10
201
+ [DelaunayMeshing]
202
+ num_threads=-1
203
+ max_proj_dist=20
204
+ max_depth_dist=0.050000000000000003
205
+ visibility_sigma=3
206
+ distance_sigma_factor=1
207
+ quality_regularization=1
208
+ max_side_length_factor=25
209
+ max_side_length_percentile=95
scans/03_08_2026/colmap/sparse/0/cameras.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fa5898b8e1f7de29dbb270401f2c92bd246ef70149a6ec6089dc0c14a2d8c0d9
3
+ size 1912
scans/03_08_2026/colmap/sparse/0/images.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:58a6126c70374a19ed1ef73e34c9a97ab86bd91946fb53392b51d95e2cbd1806
3
+ size 8198230
scans/03_08_2026/colmap/sparse/0/points3D.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:cfe84b4e9b45154a2e92b5b3bddf500cc9cfa5dc3fbd69e38ca16792cd30a46d
3
+ size 1281328
scans/03_08_2026/colmap/sparse/project.ini ADDED
@@ -0,0 +1,209 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ log_to_stderr=true
2
+ random_seed=0
3
+ log_level=0
4
+ database_path=/home/codaero/Projects/Microscopic-3D-Reconstruction/microscope-data/scans/03_08_2026/colmap/database.db
5
+ image_path=/home/codaero/Projects/Microscopic-3D-Reconstruction/microscope-data/scans/03_08_2026/focus_stacked
6
+ [ImageReader]
7
+ single_camera=false
8
+ single_camera_per_folder=false
9
+ single_camera_per_image=false
10
+ existing_camera_id=-1
11
+ default_focal_length_factor=1.2
12
+ mask_path=
13
+ camera_model=SIMPLE_RADIAL
14
+ camera_params=
15
+ camera_mask_path=
16
+ [SiftExtraction]
17
+ use_gpu=true
18
+ estimate_affine_shape=true
19
+ upright=false
20
+ domain_size_pooling=false
21
+ num_threads=-1
22
+ max_image_size=2400
23
+ max_num_features=8192
24
+ first_octave=-1
25
+ num_octaves=4
26
+ octave_resolution=3
27
+ max_num_orientations=2
28
+ dsp_num_scales=10
29
+ peak_threshold=0.0066666666666666671
30
+ edge_threshold=10
31
+ dsp_min_scale=0.16666666666666666
32
+ dsp_max_scale=3
33
+ gpu_index=-1
34
+ [SiftMatching]
35
+ use_gpu=true
36
+ cross_check=true
37
+ guided_matching=true
38
+ num_threads=-1
39
+ max_num_matches=32768
40
+ max_ratio=0.80000000000000004
41
+ max_distance=0.69999999999999996
42
+ gpu_index=-1
43
+ [TwoViewGeometry]
44
+ multiple_models=false
45
+ compute_relative_pose=false
46
+ min_num_inliers=15
47
+ max_num_trials=10000
48
+ max_error=4
49
+ confidence=0.999
50
+ min_inlier_ratio=0.25
51
+ [SequentialMatching]
52
+ quadratic_overlap=true
53
+ loop_detection=false
54
+ overlap=10
55
+ loop_detection_period=10
56
+ loop_detection_num_images=50
57
+ loop_detection_num_nearest_neighbors=1
58
+ loop_detection_num_checks=256
59
+ loop_detection_num_images_after_verification=0
60
+ loop_detection_max_num_features=-1
61
+ vocab_tree_path=
62
+ [SpatialMatching]
63
+ is_gps=true
64
+ ignore_z=true
65
+ max_num_neighbors=50
66
+ max_distance=100
67
+ [BundleAdjustment]
68
+ refine_focal_length=true
69
+ refine_principal_point=false
70
+ refine_extra_params=true
71
+ refine_extrinsics=true
72
+ max_num_iterations=100
73
+ max_linear_solver_iterations=200
74
+ function_tolerance=0
75
+ gradient_tolerance=0
76
+ parameter_tolerance=0
77
+ [Mapper]
78
+ ignore_watermarks=false
79
+ multiple_models=true
80
+ extract_colors=true
81
+ ba_refine_focal_length=true
82
+ ba_refine_principal_point=false
83
+ ba_refine_extra_params=true
84
+ fix_existing_images=false
85
+ tri_ignore_two_view_tracks=true
86
+ min_num_matches=15
87
+ max_num_models=50
88
+ max_model_overlap=20
89
+ min_model_size=10
90
+ init_image_id1=-1
91
+ init_image_id2=-1
92
+ init_num_trials=200
93
+ num_threads=-1
94
+ ba_min_num_residuals_for_multi_threading=50000
95
+ ba_local_num_images=6
96
+ ba_local_max_num_iterations=30
97
+ ba_global_images_freq=500
98
+ ba_global_points_freq=250000
99
+ ba_global_max_num_iterations=75
100
+ ba_global_max_refinements=5
101
+ ba_local_max_refinements=3
102
+ snapshot_images_freq=0
103
+ init_min_num_inliers=100
104
+ init_max_reg_trials=2
105
+ abs_pose_min_num_inliers=30
106
+ max_reg_trials=3
107
+ tri_max_transitivity=1
108
+ tri_complete_max_transitivity=5
109
+ tri_re_max_trials=1
110
+ min_focal_length_ratio=0.10000000000000001
111
+ max_focal_length_ratio=10
112
+ max_extra_param=1.7976931348623157e+308
113
+ ba_local_function_tolerance=0
114
+ ba_global_images_ratio=1.1000000000000001
115
+ ba_global_points_ratio=1.1000000000000001
116
+ ba_global_function_tolerance=0
117
+ ba_global_max_refinement_change=0.00050000000000000001
118
+ ba_local_max_refinement_change=0.001
119
+ init_max_error=4
120
+ init_max_forward_motion=0.94999999999999996
121
+ init_min_tri_angle=16
122
+ abs_pose_max_error=12
123
+ abs_pose_min_inlier_ratio=0.25
124
+ filter_max_reproj_error=4
125
+ filter_min_tri_angle=1.5
126
+ local_ba_min_tri_angle=6
127
+ tri_create_max_angle_error=2
128
+ tri_continue_max_angle_error=2
129
+ tri_merge_max_reproj_error=4
130
+ tri_complete_max_reproj_error=4
131
+ tri_re_max_angle_error=5
132
+ tri_re_min_ratio=0.20000000000000001
133
+ tri_min_angle=1.5
134
+ snapshot_path=
135
+ [PatchMatchStereo]
136
+ geom_consistency=true
137
+ filter=true
138
+ allow_missing_files=false
139
+ write_consistency_graph=false
140
+ max_image_size=2400
141
+ window_radius=5
142
+ window_step=1
143
+ num_samples=15
144
+ num_iterations=5
145
+ filter_min_num_consistent=2
146
+ depth_min=-1
147
+ depth_max=-1
148
+ sigma_spatial=-1
149
+ sigma_color=0.20000000298023224
150
+ ncc_sigma=0.60000002384185791
151
+ min_triangulation_angle=1
152
+ incident_angle_sigma=0.89999997615814209
153
+ geom_consistency_regularizer=0.30000001192092896
154
+ geom_consistency_max_cost=3
155
+ filter_min_ncc=0.10000000149011612
156
+ filter_min_triangulation_angle=3
157
+ filter_geom_consistency_max_cost=1
158
+ cache_size=32
159
+ gpu_index=-1
160
+ [StereoFusion]
161
+ use_cache=false
162
+ num_threads=-1
163
+ max_image_size=2400
164
+ min_num_pixels=5
165
+ max_num_pixels=10000
166
+ max_traversal_depth=100
167
+ check_num_images=50
168
+ max_reproj_error=2
169
+ max_depth_error=0.0099999997764825821
170
+ max_normal_error=10
171
+ cache_size=32
172
+ mask_path=
173
+ [Render]
174
+ adapt_refresh_rate=true
175
+ image_connections=false
176
+ min_track_len=3
177
+ refresh_rate=1
178
+ projection_type=0
179
+ max_error=2
180
+ [ExhaustiveMatching]
181
+ block_size=50
182
+ [VocabTreeMatching]
183
+ num_images=100
184
+ num_nearest_neighbors=5
185
+ num_checks=256
186
+ num_images_after_verification=0
187
+ max_num_features=-1
188
+ vocab_tree_path=
189
+ match_list_path=
190
+ [TransitiveMatching]
191
+ batch_size=1000
192
+ num_iterations=3
193
+ [ImagePairsMatching]
194
+ block_size=1225
195
+ [PoissonMeshing]
196
+ depth=13
197
+ num_threads=-1
198
+ point_weight=1
199
+ color=32
200
+ trim=10
201
+ [DelaunayMeshing]
202
+ num_threads=-1
203
+ max_proj_dist=20
204
+ max_depth_dist=0.050000000000000003
205
+ visibility_sigma=3
206
+ distance_sigma_factor=1
207
+ quality_regularization=1
208
+ max_side_length_factor=25
209
+ max_side_length_percentile=95