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Add 34857732_01 test_case.json

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  1. data/34857732_01/test_case.json +60 -0
data/34857732_01/test_case.json ADDED
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+ {
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+ "benchmark_id": "34857732_01",
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+ "sample_system": "",
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+ "tissue": "Prostate",
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+ "source_type": "cell_line",
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+ "perturbation_type": "drug",
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+ "perturbation_name": "GSK126",
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+ "default_cell_subset": "",
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+ "description": "LNCaP prostate cancer cells treated with EZH2 inhibitor GSK126.",
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+ "smiles": "CCC(C)N1C=C(C2=C(C=C(C=C21)C3=CN=C(C=C3)N4CCNCC4)C(=O)NCC5=C(C=C(NC5=O)C)C)C",
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+ "test_cases": [
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+ {
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+ "test_id": "34857732_01_01",
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+ "target_genes": [
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+ "UBE2C",
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+ "CDK1"
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+ ],
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+ "perturb_var": "dose",
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+ "control": "C",
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+ "dose_groups": [
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+ "1.0 uM"
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+ ],
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+ "time_groups": [],
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+ "relation": "DOWN",
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+ "cell_type": "LNCaP prostate cancer cell line"
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+ },
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+ {
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+ "test_id": "34857732_01_02",
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+ "target_genes": [
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+ "KLK3",
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+ "TMPRSS2",
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+ "KLK2",
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+ "ABCC4"
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+ ],
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+ "perturb_var": "dose",
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+ "control": "C",
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+ "dose_groups": [
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+ "1.0 uM"
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+ ],
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+ "time_groups": [],
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+ "relation": "UP",
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+ "cell_type": "LNCaP prostate cancer cell line"
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+ },
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+ {
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+ "test_id": "34857732_01_03",
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+ "target_genes": [
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+ "IL13",
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+ "IL4"
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+ ],
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+ "perturb_var": "dose",
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+ "control": "C",
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+ "dose_groups": [
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+ "1.0 uM"
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+ ],
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+ "time_groups": [],
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+ "relation": "NS",
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+ "cell_type": "LNCaP prostate cancer cell line"
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+ }
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+ ]
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+ }