Datasets:
Add 40766395_01 test_case.json
Browse files
data/40766395_01/test_case.json
ADDED
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{
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"benchmark_id": "40766395_01",
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"sample_system": "",
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"tissue": "Liver",
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"source_type": "cell_line",
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"perturbation_type": "drug",
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"perturbation_name": "Brefeldin A",
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"default_cell_subset": "",
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"description": "HepaRG cells treated with Brefeldin A.",
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"smiles": "CC1CCCC=CC2CC(CC2C(C=CC(=O)O1)O)O",
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"test_cases": [
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{
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"test_id": "40766395_01_01",
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"target_genes": [
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"HSPA5",
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"GTF2F1",
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"GOLGA3",
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"SYVN1",
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"LMF2",
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"HYOU1",
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"SLC38A10",
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"ZNF598",
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"PDIA4",
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"SQSTM1",
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"DDIT3",
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"ATF4",
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"INHBE",
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"ARF4"
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],
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"perturb_var": "dose",
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"control": "C",
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"dose_groups": [
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"0.01 uM",
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"0.1 uM"
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],
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"time_groups": [
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"24 h"
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],
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"relation": "UP",
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"cell_type": "HepaRG liver toxicology cell line"
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}
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]
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}
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