from __future__ import annotations from collections import Counter from typing import Any RELATION_ONTOLOGY = { "IS_A", "PART_OF", "LOCATED_IN", "HAS_ROLE", "HAS_DATE", "HAS_QUANTITY", "MENTIONS", "ENTAILS", "CONTRADICTS", "ASSOCIATED_WITH", "CAUSES", "REPORTS", "ATTRIBUTED_TO", "TREATS", "PREVENTS", "INCREASES_RISK", "DECREASES_RISK", } FACT_FIELDS = ["fact", "source_doc_id", "source_sent_id", "source_text", "confidence"] TRIPLE_FIELDS = ["head", "relation", "tail", "source_doc_id", "source_sent_id", "source_text", "confidence"] BIOMED_RELATIONS = {"TREATS", "PREVENTS", "INCREASES_RISK", "DECREASES_RISK"} HEALTHVER_DIRECT_CUES = { "TREATS": { "treat", "therapy", "therapeutic", "effective", "efficacy", "inhibit", "inactivat", "antiviral", "against", "used for", }, "PREVENTS": { "prevent", "prevention", "curb", "protect", "reduce", "mitigat", "avoid", "limit spread", "block transmission", }, "INCREASES_RISK": { "increase", "higher", "risk", "more likely", "severe", "worse", "mortality", }, "DECREASES_RISK": { "decrease", "lower", "reduced", "risk", "less likely", "protective", "mortality reduction", }, } def normalize_relation(value: Any) -> str: return str(value or "").strip().upper().replace(" ", "_").replace("-", "_") def normalize_confidence(value: Any) -> float: try: score = float(value) except (TypeError, ValueError): return 0.0 if score < 0: return 0.0 if score > 1: return 1.0 return score def source_key(item: dict[str, Any]) -> tuple[str, str]: return str(item.get("source_doc_id") or ""), str(item.get("source_sent_id") or "") def candidate_sources(evidence: list[dict[str, Any]]) -> dict[tuple[str, str], dict[str, Any]]: return {source_key(item): item for item in evidence} def validate_fact(fact: dict[str, Any], sources: dict[tuple[str, str], dict[str, Any]]) -> list[str]: errors: list[str] = [] for field in FACT_FIELDS: if fact.get(field) in {None, ""}: errors.append(f"missing_{field}") if source_key(fact) not in sources: errors.append("citation_not_in_candidate_pool") return errors def validate_triple(triple: dict[str, Any], sources: dict[tuple[str, str], dict[str, Any]], dataset: str) -> list[str]: errors: list[str] = [] for field in TRIPLE_FIELDS: if triple.get(field) in {None, ""}: errors.append(f"missing_{field}") relation = normalize_relation(triple.get("relation")) if relation not in RELATION_ONTOLOGY: errors.append("ontology_violation") if dataset == "healthver" and relation in BIOMED_RELATIONS: source_text = str(triple.get("source_text") or "").casefold() cues = HEALTHVER_DIRECT_CUES.get(relation, set()) if not any(token in source_text for token in cues): errors.append("healthver_biomed_relation_not_direct") if source_key(triple) not in sources: errors.append("citation_not_in_candidate_pool") return errors def validate_claim_extraction( dataset: str, evidence: list[dict[str, Any]], facts: list[dict[str, Any]], triples: list[dict[str, Any]], parse_success: bool, ) -> dict[str, Any]: sources = candidate_sources(evidence) fact_errors = [error for fact in facts for error in validate_fact(fact, sources)] triple_errors = [error for triple in triples for error in validate_triple(triple, sources, dataset)] citation_errors = sum(1 for error in fact_errors + triple_errors if error == "citation_not_in_candidate_pool") ontology_errors = sum(1 for error in triple_errors if error in {"ontology_violation", "healthver_biomed_relation_not_direct"}) item_count = len(facts) + len(triples) return { "parse_success": bool(parse_success), "facts": len(facts), "triples": len(triples), "item_count": item_count, "citation_valid": max(0, item_count - citation_errors), "citation_errors": citation_errors, "ontology_errors": ontology_errors, "fact_error_counts": dict(Counter(fact_errors)), "triple_error_counts": dict(Counter(triple_errors)), "claim_subgraph_built": len(triples) > 0, }