--- configs: - config_name: virtassist default: true data_files: - split: train path: virtassist/train.parquet - split: valid path: virtassist/valid.parquet - split: test1 path: virtassist/test1.parquet - split: test2 path: virtassist/test2.parquet - split: test3 path: virtassist/test3.parquet - config_name: aci data_files: - split: train path: aci/train.parquet - split: valid path: aci/valid.parquet - split: test1 path: aci/test1.parquet - split: test2 path: aci/test2.parquet - split: test3 path: aci/test3.parquet - config_name: virtscribe data_files: - split: train path: virtscribe/train.parquet - split: valid path: virtscribe/valid.parquet - split: test1 path: virtscribe/test1.parquet - split: test2 path: virtscribe/test2.parquet - split: test3 path: virtscribe/test3.parquet license: cc-by-4.0 task_categories: - text-generation tags: - medical - clinical - dialogue pretty_name: ACI-Bench --- # ACI-Bench HuggingFace upload of ACI-Bench, which evaluates a model's ability to convert clinical dialogue into structured clinical notes. This repo contains only the core benchmarking data. The full dataset is available on HuggingFace [here](https://huggingface.co/datasets/mkieffer/ACI-Bench-MedARC). If used, please cite the original authors using the citation below. ## Dataset Details | | train | valid | test1 | test2 | test3 | | ---------------------- | ----: | ----: | ----: | ----: | ----: | | **aci** | 35 | 11 | 22 | 22 | 22 | | **virtassist** | 20 | 5 | 10 | 10 | 10 | | **virtscribe** | 12 | 4 | 8 | 8 | 8 | | **total** | 67 | 20 | 40 | 40 | 40 | ### Dataset Description The dataset consists of different subsets capturing different clinical workflows 1) ambient clinical intelligence (`aci`): doctor-patient dialogue 2) virtual assistant (`virtassist`): doctor-patient dialogue with queues to trigger Dragon Copilot, e.g., "hey, dragon. show me the chest x-ray" 3) virtual scribe (`virtscribe`): doctor-patient dialogue with a short dictation from the doctor about the patient at the very beginning ### Dataset Sources - **GitHub:** https://github.com/wyim/aci-bench - **Paper:** https://www.nature.com/articles/s41597-023-02487-3 ### Direct Use ```python from datasets import load_dataset SUBSETS = ["virtassist", "virtscribe", "aci"] SPLITS = ["train", "valid", "test1", "test2", "test3"] if __name__ == "__main__": # --------------------------------------------------------------------- # 1) Load ONE subset (config) with ALL splits # --------------------------------------------------------------------- virtassist_all = load_dataset("mkieffer/ACI-Bench", name="virtassist") # --------------------------------------------------------------------- # 2) Load ONE subset (config) with ONE split # --------------------------------------------------------------------- virtassist_train = load_dataset("mkieffer/ACI-Bench", name="virtassist", split="train") # --------------------------------------------------------------------- # 3) Load TWO subsets (configs), all splits for each # --------------------------------------------------------------------- two_subsets = { "virtassist": load_dataset("mkieffer/ACI-Bench", name="virtassist"), "aci": load_dataset("mkieffer/ACI-Bench", name="aci"), } # --------------------------------------------------------------------- # 4) Load ALL subsets (virtassist, virtscribe, aci), all splits each # --------------------------------------------------------------------- all_subsets = {subset: load_dataset("mkieffer/ACI-Bench", name=subset) for subset in SUBSETS} aci_all = all_subsets["aci"] # DatasetDict aci_train = aci_all["train"] # Dataset aci_valid = aci_all["valid"] # --------------------------------------------------------------------- # 5) Load multiple splits at once # --------------------------------------------------------------------- # load each split, concatenated aci_all_test_concat = load_dataset("mkieffer/ACI-Bench", name="aci", split=["train", "test1+test2+test3"]) # load each split separately aci_all_test_separate = load_dataset("mkieffer/ACI-Bench", name="aci", split=["train", "test1", "test2", "test3"]) ``` ## Citation ``` @article{aci-bench,   author = {Wen{-}wai Yim and                 Yujuan Fu and                 Asma {Ben Abacha} and                 Neal Snider and Thomas Lin and Meliha Yetisgen},   title = {ACI-BENCH: a Novel Ambient Clinical Intelligence Dataset for Benchmarking Automatic Visit Note Generation},   journal = {Nature Scientific Data},   year = {2023} } ```