mm1109 commited on
Commit
0c17d7a
·
verified ·
1 Parent(s): 005b919

Upload results/competing/scprint_attn/summary.json with huggingface_hub

Browse files
results/competing/scprint_attn/summary.json CHANGED
@@ -1,4 +1,14 @@
1
  {
2
  "method": "scprint_attn",
3
- "error": "No module named 'scprint.scPrint'"
4
- }
 
 
 
 
 
 
 
 
 
 
 
1
  {
2
  "method": "scprint_attn",
3
+ "status": "excluded",
4
+ "reason": "small-v2.ckpt is incompatible with installed scprint API (v2.3.8): genes is multi-organism dict, cell_emb_style is null, expr_emb_style is 'metacell', and legacy hyperparameter keys remain.",
5
+ "computation_logic": "If compatible, run GNInfer on each 1k-cell atlas matrix, convert GRN scores to TF->target edges, exclude self edges, and keep top-50 targets per TF per cell type.",
6
+ "input_data_check": {
7
+ "celltype_expr_npz_keys": [
8
+ "expr",
9
+ "cell_ids",
10
+ "gene_names"
11
+ ],
12
+ "example_shape": "Astrocyte_1k expr=(1024, 18716)"
13
+ }
14
+ }