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results/experiments/exp_3/results.json
CHANGED
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@@ -190,7 +190,292 @@
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"frac_above_0.7": 0.2273,
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| 191 |
"auprc_median": 0.0151,
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| 192 |
"auroc_vs_log_npos_spearman": -0.2113,
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| 193 |
-
"auroc_vs_log_npos_pvalue": 0.345196
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},
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| 448 |
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"tf_family_grouped": "Non-TF"
|
| 449 |
+
},
|
| 450 |
+
{
|
| 451 |
+
"regulator": "STK40",
|
| 452 |
+
"auroc": 0.5734,
|
| 453 |
+
"n_pos": 163,
|
| 454 |
+
"expr_level": 0.258644,
|
| 455 |
+
"string_degree": 27.999997,
|
| 456 |
+
"tf_family": "Non-TF",
|
| 457 |
+
"tf_family_grouped": "Non-TF"
|
| 458 |
+
},
|
| 459 |
+
{
|
| 460 |
+
"regulator": "TGFBR2",
|
| 461 |
+
"auroc": 0.809,
|
| 462 |
+
"n_pos": 162,
|
| 463 |
+
"expr_level": 0.820096,
|
| 464 |
+
"string_degree": 340.999999,
|
| 465 |
+
"tf_family": "Non-TF",
|
| 466 |
+
"tf_family_grouped": "Non-TF"
|
| 467 |
+
}
|
| 468 |
+
],
|
| 469 |
+
"metadata": {
|
| 470 |
+
"n_input_regulators": 22,
|
| 471 |
+
"n_mapped_regulators": 22,
|
| 472 |
+
"n_tf_regulators": 0,
|
| 473 |
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"n_non_tf_regulators": 22,
|
| 474 |
+
"expression_proxy": "log1p(mean expression in TAM atlas cells)",
|
| 475 |
+
"string_degree_source": "H-GFB raw network feature 0 (STRING v12 score>=400, expm1)",
|
| 476 |
+
"tf_family_source": "HumanTFs_DatabaseExtract_v_1.01.txt (DBD column)",
|
| 477 |
+
"min_family_size_for_grouping": 2
|
| 478 |
+
}
|
| 479 |
},
|
| 480 |
"embedding_source": "geneformer",
|
| 481 |
"min_pos_edges": 5,
|