Datasets:
add fields and file descriptions
Browse files
README.md
CHANGED
|
@@ -86,11 +86,30 @@ English
|
|
| 86 |
|
| 87 |
### Data Fields
|
| 88 |
|
| 89 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 90 |
|
| 91 |
### Data Splits
|
| 92 |
|
| 93 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
| 94 |
|
| 95 |
## Dataset Creation
|
| 96 |
|
|
|
|
| 86 |
|
| 87 |
### Data Fields
|
| 88 |
|
| 89 |
+
The CSV files contain the following fields:
|
| 90 |
+
|
| 91 |
+
| Field | Description |
|
| 92 |
+
| ----- | ----------- |
|
| 93 |
+
| `index` | (int) Index of the article in the current dataset |
|
| 94 |
+
| `pmid` | (int) PubMed ID |
|
| 95 |
+
| `doi` | (str) Digital Object Identifier |
|
| 96 |
+
| `year` | (int) Year of publication (yyyy format)|
|
| 97 |
+
| `journal_title` | (str) Title of the journal |
|
| 98 |
+
| `journal_iso_abbreviation` | (str) ISO abbreviation of the journal |
|
| 99 |
+
| `title` | (str) Title of the article |
|
| 100 |
+
| `abstract` | (str) Abstract of the article |
|
| 101 |
+
| `category` | (enum) Category of the article, either "CognitiveTask" or "CognitiveConstruct" |
|
| 102 |
+
| `label` | (enum) Label of the article, which refers to the class labels in the `ontologies/efo.owl` ontology |
|
| 103 |
+
| `original_index` | (int) Index of the article in the full dataset |
|
| 104 |
+
|
| 105 |
|
| 106 |
### Data Splits
|
| 107 |
|
| 108 |
+
| Dataset | Description |
|
| 109 |
+
| ------- | ----------- |
|
| 110 |
+
| `pubmed/abstracts.csv.gz` | Full dataset |
|
| 111 |
+
| `pubmed/abstracts20pct.csv.gz` | 20% of the dataset (stratified random sample by `label`) |
|
| 112 |
+
| `gpt3/abstracts_gp3ada.nc` | GPT-3 embeddings of the entire dataset in XArray/CDF4 format, indexed by `doi` |
|
| 113 |
|
| 114 |
## Dataset Creation
|
| 115 |
|