Update Tuberculosis_Dataset.py
Browse files- Tuberculosis_Dataset.py +4 -4
Tuberculosis_Dataset.py
CHANGED
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@@ -1,4 +1,4 @@
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from datasets import GeneratorBasedBuilder,
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from datasets.features import Features, Value, Sequence
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import datasets
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import pandas as pd
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@@ -39,7 +39,7 @@ class TuberculosisDataset(GeneratorBasedBuilder):
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citation = _CITATION,
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)
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def _split_generators(self,
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base_url = "https://raw.githubusercontent.com/zhankai-ye/tuberculosis_dataset/main/"
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urls = {
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"cases_csv": f"{base_url}cases.csv",
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@@ -47,7 +47,7 @@ class TuberculosisDataset(GeneratorBasedBuilder):
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"caption_json": f"{base_url}image_metadata.json",
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"images_zip": "https://github.com/zhankai-ye/tuberculosis_dataset/raw/main/images/PMC.zip"
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}
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downloaded_files =
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return [
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SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs=downloaded_files),
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@@ -77,7 +77,7 @@ class TuberculosisDataset(GeneratorBasedBuilder):
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merged_df = merged_df.where(pd.notnull(merged_df), None)
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merged_df['age'] = merged_df['age'].astype('int8')
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# Prepare images
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image_filenames = self._prepare_images(images_zip,
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# Yield examples with minor adjustments for image handling
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for idx, row in merged_df.iterrows():
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from datasets import GeneratorBasedBuilder, dl_manager, DatasetInfo, BuilderConfig, SplitGenerator, Version
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from datasets.features import Features, Value, Sequence
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import datasets
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import pandas as pd
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citation = _CITATION,
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)
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def _split_generators(self, dl_manager):
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base_url = "https://raw.githubusercontent.com/zhankai-ye/tuberculosis_dataset/main/"
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urls = {
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"cases_csv": f"{base_url}cases.csv",
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"caption_json": f"{base_url}image_metadata.json",
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"images_zip": "https://github.com/zhankai-ye/tuberculosis_dataset/raw/main/images/PMC.zip"
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}
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downloaded_files = dl_manager.download_and_extract(urls)
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return [
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SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs=downloaded_files),
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merged_df = merged_df.where(pd.notnull(merged_df), None)
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merged_df['age'] = merged_df['age'].astype('int8')
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# Prepare images
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image_filenames = self._prepare_images(images_zip, dl_manager.extracted_path)
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# Yield examples with minor adjustments for image handling
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for idx, row in merged_df.iterrows():
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