Upload PAIR.py

PAIR.py

@@ -85,14 +85,14 @@ class PAIRDataset(datasets.GeneratorBasedBuilder):
 
     def _info(self):
         """_info."""
-        print("HELLOOOO")
         self.annotation_type = self.config_kwargs["annotation_type"]
         # Confirm annotation_type is set before continuing
         return datasets.DatasetInfo(
             description="My custom dataset.",
             features=datasets.Features(
                 {
-                    self.annotation_type: annotation2type[self.annotation_type],
+                    "names": datasets.Value("string"),
+                    "EC": datasets.Sequence(datasets.Value("string")),
                     "sequence": datasets.Value("string"),
                     "pid": datasets.Value("string"),
                 }
@@ -143,8 +143,8 @@ class PAIRDataset(datasets.GeneratorBasedBuilder):
             counter = 0
             for idx, annotation_type in enumerate(data.keys()):
                 print(annotation_type, self.annotation_type)
-                if annotation_type != self.annotation_type:
-                    continue
+                #if annotation_type != self.annotation_type:
+                #    continue
                 # Parse your line into the appropriate fields
                 samples = data[annotation_type]
                 for idx_2, elem in enumerate(samples):
@@ -152,7 +152,7 @@ class PAIRDataset(datasets.GeneratorBasedBuilder):
                     if elem["content"] != [None]:
                         content = elem["content"][0]
                         # print(literal_eval(content), "done")
-                        yield counter, {
+                        yield elem["pid"], {
                             "sequence": elem["seq"],
                             "pid": elem["pid"],
                             annotation_type: content,