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added author info and started usage example

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  1. README.md +19 -26
README.md CHANGED
@@ -31,11 +31,14 @@ This dataset contains all the text annotations we collected and parsed from UniP
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  <!-- Address questions around how the dataset is intended to be used. -->
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- ### Direct Use
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- <!-- This section describes suitable use cases for the dataset. -->
 
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  ### Out-of-Scope Use
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  <!-- This section addresses misuse, malicious use, and uses that the dataset will not work well for. -->
@@ -50,15 +53,9 @@ This dataset contains text annotations from Swiss-Prot February 2023; our models
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  ## Dataset Creation
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- ### Curation Rationale
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-
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- <!-- Motivation for the creation of this dataset. -->
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-
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- [More Information Needed]
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-
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  ### Source Data
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- <!-- This section describes the source data (e.g. news text and headlines, social media posts, translated sentences, ...). -->
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  #### Data Collection and Processing
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@@ -85,29 +82,25 @@ To our knowledge, this dataset does not contain any private information.
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  In general, the dataset is highly imbalanced in terms of how many and what protein sequences in Swiss-Prot have an annotation for a given annotation type. This dataset is sparse
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- ## Citation [optional]
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-
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- <!-- If there is a paper or blog post introducing the dataset, the APA and Bibtex information for that should go in this section. -->
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  **BibTeX:**
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- [More Information Needed]
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- ## Glossary [optional]
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-
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- <!-- If relevant, include terms and calculations in this section that can help readers understand the dataset or dataset card. -->
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- [More Information Needed]
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- ## More Information [optional]
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- [More Information Needed]
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- ## Dataset Card Authors [optional]
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  [More Information Needed]
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  ## Dataset Card Contact
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- For any issues with this dataset, please contact martaskreta@cs.toronto.edu or
 
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  <!-- Address questions around how the dataset is intended to be used. -->
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+ ### Example usage
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+ ```
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+ from datasets import load_dataset
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+
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+ ```
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  ### Out-of-Scope Use
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  <!-- This section addresses misuse, malicious use, and uses that the dataset will not work well for. -->
 
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  ## Dataset Creation
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  ### Source Data
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+ This data was collected from the Swiss-Prot checkpoint from February 2023, found here: XXX
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  #### Data Collection and Processing
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  In general, the dataset is highly imbalanced in terms of how many and what protein sequences in Swiss-Prot have an annotation for a given annotation type. This dataset is sparse
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+ ## Citation
 
 
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  **BibTeX:**
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+ ```
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+ @article{duan2024boosting,
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+ title={Boosting the Predictive Power of Protein Representations with a Corpus of Text Annotations},
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+ author={Duan, Haonan and Skreta, Marta and Cotta, Leonardo and Rajaonson, Ella Miray and Dhawan, Nikita and Aspuru-Guzik, Alán and Maddison, Chris J},
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+ journal={bioRxiv},
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+ pages={2024--07},
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+ year={2024},
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+ publisher={Cold Spring Harbor Laboratory}
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+ }
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+ ```
 
 
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+ ## Dataset Card Authors
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  [More Information Needed]
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  ## Dataset Card Contact
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+ For any issues with this dataset, please contact `martaskreta@cs.toronto.edu` or `haonand@cs.toronto.edu`