APIURL = 'https://demo.kitware.com/histomicstk/api/v1/' # apiKey = None # interactive login apiKey = 'n0Kp1ez8YOnOiWNoACryzeBlIzbUDW3iOD2DmPLI' source_folder_id = '5bbdeba3e629140048d017bb' SAVEPATH = './' ROIBOUNDSPATH = './meta/roiBounds.csv' # Set either MPP or MAG. # If both are None, base (scan) magnification is used. # Microns-per-pixel -- best use this # MPP of 0.25 is "standardized" at 40x using original Aperio scanners # MPP = None MPP = 0.25 # If you prefer to use whatever magnification is reported MAG = None # MAG = 40.0 # What things to download? -- comment out whet you dont want PIPELINE = ( 'images', 'masks', # 'annotations', ) # if you only want to download data for specific slides SLIDES_TO_KEEP = None # SLIDES_TO_KEEP = ['TCGA-BH-A1FC', 'TCGA-A8-A07C', 'TCGA-A1-A0SK']