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2560dd0 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 | #!/usr/bin/env python3
"""Run motif coverage eval for ablation tokenizers + references (baseline_bpe_5120, merge_uni_len2_5120)."""
import sys
from pathlib import Path
# Monkey-patch the tokenizer paths before importing
import motif_coverage_eval as mce
mce.DEFAULT_TOKENIZER_PATHS = {
"baseline_bpe_5120": "tokenizer_evaluation/baseline_bpe/vocab_5120/5120_tokenizer.json",
"merge_uni_len2_5120": "tokenizer_evaluation/merge_bpe/vocab_5120/merge_tokenizer_unigram_len2.json",
"ablation_no_partition": "tokenizer_evaluation/ablation/vocab_5120/ablation_no_partition.json",
"ablation_no_priority": "tokenizer_evaluation/ablation/vocab_5120/ablation_no_priority.json",
"ablation_no_length": "tokenizer_evaluation/ablation/vocab_5120/ablation_no_length.json",
}
if __name__ == "__main__":
sys.argv = [
sys.argv[0],
"--motif-file", "/data/n5huang/dna_token/motifs.txt",
"--output-dir", "/home/n5huang/dna_token/tokenizer_evaluation/motif_eval_outputs_ablation",
]
mce.main()
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