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README.md
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license: cc-by-nc-sa-4.0
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license: cc-by-nc-sa-4.0
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---
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## Dataset Composition
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### Core Components
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| Component | Sequences | Tokens | Description |
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| :--- | ---: | ---: | :--- |
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| `ur50fp + tadb3` | 59,105,250 | 16,962,555,230 | UniRef50 + FPbase + TADB3 |
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| `cazy` | 3,959,189 | 1,921,007,072 | Carbohydrate-Active enzymes |
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| `toxinome` | 1,974,360 | 469,597,755 | Toxin sequences |
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| `rvdbclustered` | 785,885 | 293,182,038 | Reference virus database |
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| `pat` | +7,010 | +7,169,447 | PAT database |
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| `t1tadb` | +1,945 | +70,078 | Type 1 TADB |
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| `tantigen2` | 877 | 529,218 | Tumor antigens |
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| `plasticenz` | 267 | 93,596 | Plastic enzymes |
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| `pazy` | 131 | 37,586 | PAZy database |
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| `omgprot50mincov3` | ~26.6M | ~5.1B | OMG protein sequences (calculated) |
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### Additional Large Components
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| Component | Sequences | Tokens |
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| :--- | ---: | ---: |
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| `logan50 human-complete` | +71,363,348 | +7,498,753,875 |
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| `virefirst10m` | 9,999,989 | 2,342,601,367 |
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| `bfvd + sgdyeast + araplant` | 708,637 | 225,386,002 |
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#### Breakdown: `bfvd` + `sgdyeast` + `araplant`
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Detailed statistics for the combined biological set listed above.
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| Component | Sequences | Tokens |
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| :--- | ---: | ---: |
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| `bfvd` | 350,637 | 67,645,357 |
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| `sgdyeast` (strains) | 303,635 | 133,912,277 |
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| `araplant` (Arabidopsis) | 48,338 | 20,894,760 |
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| `sgdyeast` (ref) | 6,027 | 2,933,608 |
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| **Total** | **708,637** | **225,386,002** |
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