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- license: mit
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+ license: mit
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+ ## ReTiNA-1: Automated Retention Time Prediction for LC-MS
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+ ReTiNA-1 is an open-source dataset for training machine learning models to predict small molecule retention times in LC-MS workflows.
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+ ## 📈 The ReTiNA-1 Dataset
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+ The ReTiNA-1 dataset contains:
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+ - 4,359,188 molecule–environment combinations, the largest singular LC-MS retention time dataset of its kind to date
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+ - Experimentally measured retention times, in seconds, curated from public datasets, benchmark papers, and literature
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+ 91 distinct LC-MS environments are used in ReTiNA-1. Each environment consists of:
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+ - Solvent mixtures A and B, consisting of solvents and solvent additives contributing to pH
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+ - The mobile phase gradient used, defined by the percentage of solvent mixture B over time (min)
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+ - The chromatographic technique used - either HILIC or reverse phase
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+ - LC-MS column dimensions, in terms of column length (mm), internal diameter (mm), and particle size (µm)
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+ - The mobile phase flow rate, measured in mL/min
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+ - The column temperature, measured in degrees Celsius
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+ ReTiNA-1 is actively expanding with new experimental retention time values from the Coley Research Group at MIT, ensuring it remains a growing resource for optical property prediction.
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+ This dataset is designed for use in:
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+ - Estimating retention times for new compound–environment combinations
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+ - Aiding in peak assignment during LC-MS method development
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+ - Training ML models for retention time prediction under specific conditions