Commit
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88e3e99
1
Parent(s):
11bfd3b
Update EpiClassify4GARD.py
Browse files- EpiClassify4GARD.py +2 -0
EpiClassify4GARD.py
CHANGED
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@@ -28,6 +28,7 @@ INSERT DESCRIPTION
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_CITATION = """\
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John JN, Sid E, Zhu Q. Recurrent Neural Networks to Automatically Identify Rare Disease Epidemiologic Studies from PubMed. AMIA Jt Summits Transl Sci Proc. 2021 May 17;2021:325-334. PMID: 34457147; PMCID: PMC8378621.
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"""
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_TRAIN_DOWNLOAD_URL = "https://huggingface.co/datasets/ncats/EpiClassify4GARD/raw/main/train.tsv"
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_VAL_DOWNLOAD_URL = "https://huggingface.co/datasets/ncats/EpiClassify4GARD/raw/main/validation.tsv"
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_TEST_DOWNLOAD_URL = "https://huggingface.co/datasets/ncats/EpiClassify4GARD/raw/main/test.tsv"
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@@ -68,6 +69,7 @@ class EpiClassify4GARD(datasets.GeneratorBasedBuilder):
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)
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next(csv_reader)
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for id_, row in enumerate(csv_reader):
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abstract = row[0]
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label = row[1]
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yield id_, {"abstract": abstract, "label": int(label)}
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_CITATION = """\
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John JN, Sid E, Zhu Q. Recurrent Neural Networks to Automatically Identify Rare Disease Epidemiologic Studies from PubMed. AMIA Jt Summits Transl Sci Proc. 2021 May 17;2021:325-334. PMID: 34457147; PMCID: PMC8378621.
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"""
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+
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_TRAIN_DOWNLOAD_URL = "https://huggingface.co/datasets/ncats/EpiClassify4GARD/raw/main/train.tsv"
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_VAL_DOWNLOAD_URL = "https://huggingface.co/datasets/ncats/EpiClassify4GARD/raw/main/validation.tsv"
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_TEST_DOWNLOAD_URL = "https://huggingface.co/datasets/ncats/EpiClassify4GARD/raw/main/test.tsv"
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)
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next(csv_reader)
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for id_, row in enumerate(csv_reader):
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print(row)
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abstract = row[0]
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label = row[1]
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yield id_, {"abstract": abstract, "label": int(label)}
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