representation
stringlengths
2
109
harmonization_standard
stringlengths
6
86
variation_type
stringclasses
8 values
source_terminology
stringclasses
6 values
Pseudomonassp PNP4-2
Pseudomonas sp. PNP4-2
remove punctuation
NCBI
Rhodanobacter sp. PAMC 26557
Rhodanobacter sp. PAMC 26557
standard
NCBI
Phormidesmis spUs-6-4
Phormidesmis sp. Us-6-4
remove punctuation
NCBI
streptomyc sp. E4N145
Streptomyces sp. E4N145
remove suffix
NCBI
Firmicutesbacterium CAG11056_8
Firmicutes bacterium CAG:110_56_8
remove punctuation
NCBI
Streptacidiphilus spFXJ1271
Streptacidiphilus sp. FXJ1.271
remove punctuation
NCBI
Agrobacterium spRAFAA_20
Agrobacterium sp. RAFAA_20
remove punctuation
NCBI
Streptomycessp VUW_JGO2c-F3
Streptomyces sp. VUW_JGO2c-F3
remove punctuation
NCBI
WinogradskyellaspZB357
Winogradskyella sp. ZB357
remove punctuation
NCBI
Sporosarcina sp. 'ARUP UnID 606'
Sporosarcina sp.
user rep
(Derived) Bacteria Root
Flavobacterium sp Emb16
Flavobacterium sp. Emb16
remove punctuation
NCBI
Pasteurella skyensis DSM 24204
Pasteurella skyensis
user rep
(Derived) Bacteria Root
PseudomonasspBE08
Pseudomonas sp. BE08
remove punctuation
NCBI
Enterobactersp.B-15
Enterobacter sp. B-15
remove punctuation
NCBI
bacterium LimB-1-J-67
bacterium LimB-1-J-67
standard
NCBI
Verrucomicrobium sp 3C
Verrucomicrobium sp. 3C
remove punctuation
NCBI
Bacillus sp. ITCr14
Bacillus sp. ITCr14
standard
NCBI
Marinobacter sp NB-8
Marinobacter sp. NB-8
remove punctuation
NCBI
marinebacteriumSIMO IS-574-241
marine bacterium SIMO IS-574-241
remove punctuation
NCBI
unculturedalpha proteobacteriumSUR-FREE-3
uncultured alpha proteobacterium SUR-FREE-3
remove punctuation
NCBI
bacterium enrichmentculturecloneALO1_GLFRUDD03FWU1O
bacterium enrichment culture clone ALO1_GLFRUDD03FWU1O
remove punctuation
NCBI
Borrelia sp.C385
Borrelia sp. C385
remove punctuation
NCBI
candidatedivisionKSB1 bacterium
candidate division KSB1 bacterium
remove punctuation
NCBI, (Derived) Bacteria Root
acidithiobacillu sp. th-3
Acidithiobacillus sp. TH-3
remove suffix
NCBI
Methylobacterium sp.J-122
Methylobacterium sp. J-122
remove punctuation
NCBI
Prochlorococcus sp.AG-432-D11
Prochlorococcus sp. AG-432-D11
remove punctuation
NCBI
Psychrobacter sp. MSSRF.17
Psychrobacter sp. MSSRF.17
standard
NCBI
Omnitrophica WOR_2 bacterium GWA2_37_7
Omnitrophica WOR_2 bacterium
user rep
(Derived) Bacteria Root
Micromonosporasp.WMMB 410
Micromonospora sp. WMMB 410
remove punctuation
NCBI
uncultur treponematacea bacterium
uncultured Treponemataceae bacterium
remove suffix
NCBI
Capilliphycus sp.PMC 1121.19
Capilliphycus sp. PMC 1121.19
remove punctuation
NCBI
marinegamma proteobacteriumBB2FL1
marine gamma proteobacterium BB2FL1
remove punctuation
NCBI
Bacteriovoraxsp. M2S3-F
Bacteriovorax sp. M2S3-F
remove punctuation
NCBI
Aeromonas sp.R5-2
Aeromonas sp. R5-2
remove punctuation
NCBI
Citromicrobium sp. JL1041
Citromicrobium sp.
user rep
(Derived) Bacteria Root
unculturedRhodobacter groupbacteriumCtaxTah-7
uncultured Rhodobacter group bacterium CtaxTah-7
remove punctuation
NCBI
Gardnerella sp KA00127
Gardnerella sp. KA00127
remove punctuation
NCBI
Trabulsiellasp.MSZT2
Trabulsiella sp. MSZT2
remove punctuation
NCBI
alphaproteobacterium TDB-089
alpha proteobacterium TDB-089
remove punctuation
NCBI
PrevotellaamniiDSM23384=JCM 14753
Prevotella amnii DSM 23384 = JCM 14753
remove punctuation
NCBI
Burkholderia sp. N2s35
Burkholderia sp. N2s_35
remove punctuation
NCBI
Pseudovibrio sp. AU262
Pseudovibrio sp.
user rep
(Derived) Bacteria Root
Synechococcussp.K32
Synechococcus sp. K32
remove punctuation
NCBI
Rickettsia endosymbiontofAmblyommahelvolum
Rickettsia endosymbiont of Amblyomma helvolum
remove punctuation
NCBI
Staphylococcus aureu DAR5825
Staphylococcus aureus DAR5825
remove suffix
NCBI
Bacillus sp.CSu343
Bacillus sp. CSu3_43
remove punctuation
NCBI
Brevundimonas sp B2786_1
Brevundimonas sp. B2786_1
remove punctuation
NCBI
Microcystis aeruginosaLEGE 00239
Microcystis aeruginosa LEGE 00239
remove punctuation
NCBI
marine bacteriumCS-90
marine bacterium CS-90
remove punctuation
NCBI
Agromyces sp. KACC 19306
Agromyces intestinalis
user rep
NCBI
Desulfovibrio sp. SCGC AD-285-O15
Desulfovibrio sp. SCGC AD-285-O15
standard
NCBI
bacteriumenrichmentculture clone 080212-ABM-Calcigel2-25
bacterium enrichment culture clone 080212-ABM-Calcigel 2-25
remove punctuation
NCBI
Thauerasp.HMW86174
Thauera sp. HMW86_174
remove punctuation
NCBI
Vibrio sp LC2-055
Vibrio sp. LC2-055
remove punctuation
NCBI
Aeromonas sp. A619
Aeromonas sp.
user rep
(Derived) Bacteria Root
Prevotella sp UBA752
Prevotella sp. UBA752
remove punctuation
NCBI
Shewanellasp XH11
Shewanella sp. XH11
remove punctuation
NCBI
Marinomonas sp S11-S-3
Marinomonas sp. S11-S-3
remove punctuation
NCBI
Arthrobacter sp. I_GA_A_3_4
Arthrobacter sp. I_GA_A_3_4
standard
NCBI
NostocspIJ461
Nostoc sp. IJ461
remove punctuation
NCBI
Clostridiumsp.DSM8385
Clostridium sp. DSM 8385
remove punctuation
NCBI
sludge granule bacterium 2
sludge granule bacterium 2
standard
NCBI
StaphylococcusaureusVET0384R
Staphylococcus aureus VET0384R
remove punctuation
NCBI
Salmonella entericasubsp entericaserovar Newportstr.RI_10P068
Salmonella enterica subsp. enterica serovar Newport str. RI_10P068
remove punctuation
NCBI
Dyadobacter koreensis
Dyadobacter
user rep
(Derived) Bacteria Root
Bradyrhizobium sp. 13LoS120_4
Bradyrhizobium sp. 13LoS120_4
standard
NCBI
Ruegeriasp.JZ11ML23
Ruegeria sp. JZ11ML23
remove punctuation
NCBI
Ehrlichia sp. JZT051
Ehrlichia sp. JZT051
standard
NCBI
Micromonosporasp3SH510
Micromonospora sp. 3SH5_10
remove punctuation
NCBI
Streptomyces sp me71
Streptomyces sp. me71
remove punctuation
NCBI
MicromonosporaspCR5
Micromonospora sp. CR5
remove punctuation
NCBI
Halomonassp CNPS_10
Halomonas sp. CNPS_10
remove punctuation
NCBI
ActinomycetalesbacteriumTLI168
Actinomycetales bacterium TLI168
remove punctuation
NCBI
Advenellasp.WSd3
Advenella sp. W_Sd3
remove punctuation
NCBI
Pseudomonas sp. 4AAIII
Pseudomonas sp. 4AAIII
standard
NCBI
Mycobacterium paraseoulense
Mycobacterium paraseoulense
standard
NCBI
Brachybacteriumsp ChroAq96
Brachybacterium sp. ChroAq 96
remove punctuation
NCBI
Bacillus sp.KP58
Bacillus sp. KP58
remove punctuation
NCBI
Alcaligenes sp. AL3007
Alcaligenes sp. AL3007
standard
NCBI
Vibrio sp. HM12-79
Vibrio sp. HM12-79
standard
NCBI
Nostocsp. 'cyanobiontofPeltigeramembranacea'
Nostoc sp. 'cyanobiont of Peltigera membranacea'
remove punctuation
NCBI
Dactylosporangium sp FXJ1262
Dactylosporangium sp. FXJ1.262
remove punctuation
NCBI
MesorhizobiumspLNJC386A00
Mesorhizobium sp. LNJC386A00
remove punctuation
NCBI
Verrucomicrobia bacteriumIMCC14639
Verrucomicrobia bacterium IMCC14639
remove punctuation
NCBI
Burkholderia sp. VG4_2d_pre
Burkholderia sp. VG4_2d_pre
standard
NCBI
Lactococcuslactis subsp.lactis K214
Lactococcus lactis subsp. lactis K214
remove punctuation
NCBI
Pseudomonassp Os17
Pseudomonas sp. Os17
remove punctuation
NCBI
RhodobacaspAN95
Rhodobaca sp. AN95
remove punctuation
NCBI
Vibriosp SPRZ213
Vibrio sp. SPRZ213
remove punctuation
NCBI
ComamonasspSMCC B0675
Comamonas sp. SMCC B0675
remove punctuation
NCBI
streptomyc sp. ISO678_OTU4111
Streptomyces sp. ISO678_OTU4111
remove suffix
NCBI
bacteriumenrichment cultureclone Dan6012E
bacterium enrichment culture clone Dan60_12E
remove punctuation
NCBI
Sporosarcinasp.A2-4c-7
Sporosarcina sp. A2-4c-7
remove punctuation
NCBI
Methylobacterium sp. iEIV1
Methylobacterium sp.
user rep
(Derived) Bacteria Root
Salmonellasp0000-0058-2889
Salmonella sp. 0000-0058-2889
remove punctuation
NCBI
Sinorhizobiumsp.CZ217nodule
Sinorhizobium sp. CZ2_17_nodule
remove punctuation
NCBI
uncultured alphaproteobacterium MB11B07
uncultured alpha proteobacterium MB11B07
remove punctuation
NCBI
bacillu sp. FJAT-4557
Bacillus sp. FJAT-4557
remove suffix
NCBI
Enterococcussp660643J
Enterococcus sp. 660643J
remove punctuation
NCBI
Streptococcussp 2010Ileo_MSXXc
Streptococcus sp. 2010_Ileo_MS_XXc
remove punctuation
NCBI