Datasets:
Add per-task setups, visualizations, and vfemale50 try-it bundles (part 3)
Browse filesThis view is limited to 50 files because it contains too many changes. See raw diff
- .gitattributes +4 -0
- try-it/mr/vfemale50-v1/dataset/contrast-profiles/truefisp-localizer-3t-v5.json +22 -0
- try-it/mr/vfemale50-v1/dataset/editor-bounds-v5-selected.json +88 -0
- try-it/mr/vfemale50-v1/dataset/manifest.json +49 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-000.bin.gz +3 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-000.json +80 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-001.bin.gz +3 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-001.json +80 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-002.bin.gz +3 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-002.json +80 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-003.bin.gz +3 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-003.json +80 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-004.bin.gz +3 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-004.json +80 -0
- try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected.json +53 -0
- try-it/mr/vfemale50-v1/source-volumes/static-pd-v1.bin.gz +3 -0
- try-it/mr/vfemale50-v1/source-volumes/static-pd-v1.json +80 -0
- try-it/mr/vfemale50-v1/source-volumes/static-t1-v1.bin.gz +3 -0
- try-it/mr/vfemale50-v1/source-volumes/static-t1-v1.json +80 -0
- try-it/mr/vfemale50-v1/source-volumes/static-t2-v1.bin.gz +3 -0
- try-it/mr/vfemale50-v1/source-volumes/static-t2-v1.json +80 -0
- try-it/mr/vfemale50-v1/source-volumes/static-truefisp-3t-v5-selected.bin.gz +3 -0
- try-it/mr/vfemale50-v1/source-volumes/static-truefisp-3t-v5-selected.json +80 -0
- try-it/mr/vfemale50-v1/subject-extension.json +17 -0
- try-it/mr/vfemale50-v1/workflow/minimal-ventricular-function-v3.json +637 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/attenuation-db-cm-mhz/c/0/0/0 +0 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/attenuation-db-cm-mhz/zarr.json +1 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/boundary-normal-xyz/c/0/0/0/0 +3 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/boundary-normal-xyz/zarr.json +1 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/boundary-strength/c/0/0/0 +3 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/boundary-strength/zarr.json +1 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/density-kgm3/c/0/0/0 +0 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/density-kgm3/zarr.json +1 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/labels/c/0/0/0 +0 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/labels/zarr.json +1 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/scatter-strength/c/0/0/0 +3 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/scatter-strength/zarr.json +1 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/skin-sdf-mm/c/0/0/0 +3 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/skin-sdf-mm/zarr.json +1 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/sound-speed-mps/c/0/0/0 +0 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/sound-speed-mps/zarr.json +1 -0
- try-it/us/synthetic-abdomen-v1/arrays.zarr/zarr.json +1 -0
- try-it/us/synthetic-abdomen-v1/bundle-manifest.json +1 -0
- try-it/us/synthetic-abdomen-v1/fields/attenuation_db_cm_mhz.json +1 -0
- try-it/us/synthetic-abdomen-v1/fields/boundary_normal_xyz.json +1 -0
- try-it/us/synthetic-abdomen-v1/fields/boundary_strength.json +1 -0
- try-it/us/synthetic-abdomen-v1/fields/density_kgm3.json +1 -0
- try-it/us/synthetic-abdomen-v1/fields/labels.json +1 -0
- try-it/us/synthetic-abdomen-v1/fields/scatter_strength.json +1 -0
- try-it/us/synthetic-abdomen-v1/fields/skin_sdf_mm.json +1 -0
.gitattributes
CHANGED
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@@ -248,3 +248,7 @@ try-it/ct/torso-task-pack/cases/c-a05/series/s01/chunks/0080-0000-0000.hu16 filt
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try-it/ct/torso-task-pack/cases/c-a05/series/s01/chunks/0096-0000-0000.hu16 filter=lfs diff=lfs merge=lfs -text
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try-it/ct/torso-task-pack/cases/c-a05/series/s01/chunks/0112-0000-0000.hu16 filter=lfs diff=lfs merge=lfs -text
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try-it/ct/torso-task-pack/cases/c-a05/series/s01/chunks/0128-0000-0000.hu16 filter=lfs diff=lfs merge=lfs -text
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try-it/ct/torso-task-pack/cases/c-a05/series/s01/chunks/0096-0000-0000.hu16 filter=lfs diff=lfs merge=lfs -text
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try-it/ct/torso-task-pack/cases/c-a05/series/s01/chunks/0112-0000-0000.hu16 filter=lfs diff=lfs merge=lfs -text
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try-it/ct/torso-task-pack/cases/c-a05/series/s01/chunks/0128-0000-0000.hu16 filter=lfs diff=lfs merge=lfs -text
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try-it/us/synthetic-abdomen-v1/arrays.zarr/boundary-normal-xyz/c/0/0/0/0 filter=lfs diff=lfs merge=lfs -text
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try-it/us/synthetic-abdomen-v1/arrays.zarr/boundary-strength/c/0/0/0 filter=lfs diff=lfs merge=lfs -text
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try-it/us/synthetic-abdomen-v1/arrays.zarr/scatter-strength/c/0/0/0 filter=lfs diff=lfs merge=lfs -text
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try-it/us/synthetic-abdomen-v1/arrays.zarr/skin-sdf-mm/c/0/0/0 filter=lfs diff=lfs merge=lfs -text
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try-it/mr/vfemale50-v1/dataset/contrast-profiles/truefisp-localizer-3t-v5.json
ADDED
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{
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"clinical_validation": false,
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"contrast_inputs": [
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"PD",
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"T1",
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"T2",
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"TR",
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"TE",
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"flip_angle"
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],
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"display_gamma": 1.0,
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"displayed_cardiac_phases": 1,
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"field_strength_t": 3.0,
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"flip_angle_deg": 50.0,
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"gating": "none",
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"profile_id": "truefisp-localizer-3t-v5",
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"research_only": true,
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"schema_version": "contrast-profile-v3",
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"sequence_family": "balanced_ssfp_truefisp_family_localizer",
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"te_ms": 1.5,
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"tr_ms": 3.0
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}
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try-it/mr/vfemale50-v1/dataset/editor-bounds-v5-selected.json
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{
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"bounds_are_clinical": false,
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"coordinate_space": "workflow-v3 crop-relative ZYX millimetres",
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"count": {
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"maximum": 20,
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"minimum": 6,
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"step": 1
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},
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"coverage_mm": {
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"maximum": 140.0,
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"minimum": 40.0,
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"step": 1.0
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},
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"coverage_policy": "Scalar bounds are UI bounds. Every requested plane corner including half thickness is checked against source support; source coverage is authoritative.",
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"fov_phase_mm": {
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"maximum": 320.0,
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"minimum": 220.0,
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"step": 2.0
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},
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"fov_read_mm": {
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"maximum": 340.0,
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"minimum": 220.0,
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"step": 2.0
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},
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"fov_read_reconciliation": {
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"affected_series": [
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"localizer_2ch",
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"localizer_4ch",
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"cine_2ch",
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"cine_4ch"
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],
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"alternatives_rejected": "Re-prescribing the four long-axis series inside 320 mm would change shipped geometry and break comparability with the accepted v3 and v4 bundles. Leaving the mismatch documented would leave the editor unable to reproduce four of its own previews.",
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"current_maximum_mm": 340.0,
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"grid_check": "340.0 = 220.0 + 60 * 2.0, so the new maximum is on the declared step",
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"laptop_action_required": "The editor must re-read these bounds; the schema_version changed deliberately so a cached copy of the v3 bounds cannot be mistaken for the current ones.",
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"measured_violation": "fov_read_mm 340.0 on exactly those four series and on no others; fov_phase_mm 312.0 and slice_thickness_mm 6.0 were already inside their bounds",
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"previous_maximum_mm": 320.0,
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"resolution": "raised fov_read_mm.maximum from 320.0 to 340.0"
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},
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"gap_mm": {
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"definition": "spacing-thickness",
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"maximum": 6.0,
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"minimum": -6.0
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},
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"out_of_coverage_error": "OUT_OF_RESLICE_COVERAGE",
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"research_only": true,
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"rotation_deg": {
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"maximum": 15.0,
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"minimum": -15.0,
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"step": 0.5
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},
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"schema_version": "minimal-vf-editor-bounds-v5-selected",
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"source_support_zyx_mm": [
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[
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-119.9817491558854,
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-115.9339814631361,
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-98.30456657640491
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],
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[
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406.0182508441146,
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414.0660185368639,
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389.6954334235951
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]
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],
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"spacing_mm": {
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"maximum": 10.0,
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"minimum": 4.0,
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"step": 0.5
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},
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"supersedes": "minimal-vf-editor-bounds-v3",
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"thickness_mm": {
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"maximum": 10.0,
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"minimum": 4.0,
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"step": 0.5
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},
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"translation_zyx_mm": {
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"maximum": [
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20.0,
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20.0,
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20.0
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],
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"minimum": [
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-20.0,
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-20.0,
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-20.0
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]
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}
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}
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try-it/mr/vfemale50-v1/dataset/manifest.json
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{
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"case_count": 3,
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"cases": [
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{
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"case_id": "vfemale50_identity",
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"case_json_sha256": "2df5802e4b7e41acfe3c4a8d4929912c18ee97727e093d84e2f1f093c17578e4",
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"display_shift_xy_px": [
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0,
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0
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],
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"raster_count": 48,
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"relative_path": "cases/vfemale50_identity"
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},
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{
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"case_id": "vfemale50_shift_left",
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"case_json_sha256": "b8273046d68029a6bd33b0537b7fc9d0bc81e4bc4b3284493feca399bedf27f9",
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"display_shift_xy_px": [
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],
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"raster_count": 48,
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"relative_path": "cases/vfemale50_shift_left"
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},
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{
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"case_id": "vfemale50_shift_right",
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"case_json_sha256": "c5b0ed82dd57e8b18a37a8559b02b39262bb1f6ef6e2e19851ebfedce38b64fb",
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"display_shift_xy_px": [
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24,
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],
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"raster_count": 48,
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"relative_path": "cases/vfemale50_shift_right"
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}
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],
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"contrast_profile_paths": {
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"bssfp-cine-3t-v5": "contrast-profiles/bssfp-cine-3t-v5.json",
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"truefisp-localizer-3t-v5": "contrast-profiles/truefisp-localizer-3t-v5.json"
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},
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"editor_bounds_path": "editor-bounds-v5-selected.json",
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"image_dimensions_px": [
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256,
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256
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],
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"patient_data": false,
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"per_case_raster_count": 48,
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"research_only": true,
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"schema_version": "xcat-minimal-vf-contrast-workflow-dataset-v3",
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"workflow_path": "workflow/minimal-ventricular-function-v3.json"
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}
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try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-000.bin.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:53e5ace78e85d636076f60368792bdcffd3971b79af586620658f481cf1d8bc3
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size 527989
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try-it/mr/vfemale50-v1/source-volumes/cine-bssfp-3t-v5-selected-phase-000.json
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ADDED
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ADDED
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try-it/mr/vfemale50-v1/subject-extension.json
ADDED
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| 3 |
+
"aggregate_sha256": "aa97e748f56089ea785494c8302b7c2890c752a0f148c2fafb9b9bb013a71073",
|
| 4 |
+
"cine_source_sidecar": "source-volumes/cine-bssfp-3t-v5-selected.json",
|
| 5 |
+
"file_count": 186,
|
| 6 |
+
"manifest_sha256": "91c5520e7f9e45823790434f44d2d7720304cdf4cc94885d82f1fd7b0e7edead",
|
| 7 |
+
"schema_version": "laptop-minimal-vf-workflow-v5-selected",
|
| 8 |
+
"static_source_sidecar": "source-volumes/static-truefisp-3t-v5-selected.json",
|
| 9 |
+
"workflow_path": "workflow/minimal-ventricular-function-v3.json"
|
| 10 |
+
},
|
| 11 |
+
"display_name": "Synthetic vfemale50 (XCAT)",
|
| 12 |
+
"license_scope": "authorized-local-use-only",
|
| 13 |
+
"patient_data": false,
|
| 14 |
+
"research_only": true,
|
| 15 |
+
"schema_version": "biri-subject-extension-v1",
|
| 16 |
+
"subject_id": "vfemale50"
|
| 17 |
+
}
|
try-it/mr/vfemale50-v1/workflow/minimal-ventricular-function-v3.json
ADDED
|
@@ -0,0 +1,637 @@
|
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|
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|
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|
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|
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|
|
|
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|
|
|
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|
|
|
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|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"display_label": "Synthetic Minimal Ventricular Function \u00b7 contrast-aware v3",
|
| 3 |
+
"golden_prescription_source": "dataset case context; canonical orientation repaired",
|
| 4 |
+
"initial_queue": [
|
| 5 |
+
{
|
| 6 |
+
"allowed_in_add_sequence_menu": true,
|
| 7 |
+
"display_id": "localizer_3plane",
|
| 8 |
+
"instance_id": "initial-localizer_3plane",
|
| 9 |
+
"queue_index": 0,
|
| 10 |
+
"queue_item_kind": "sequence",
|
| 11 |
+
"template_id": "localizer_3plane"
|
| 12 |
+
},
|
| 13 |
+
{
|
| 14 |
+
"allowed_in_add_sequence_menu": true,
|
| 15 |
+
"display_id": "scout_sag",
|
| 16 |
+
"instance_id": "initial-scout_sag",
|
| 17 |
+
"queue_index": 1,
|
| 18 |
+
"queue_item_kind": "sequence",
|
| 19 |
+
"template_id": "scout_sag"
|
| 20 |
+
},
|
| 21 |
+
{
|
| 22 |
+
"allowed_in_add_sequence_menu": true,
|
| 23 |
+
"display_id": "scout_tra",
|
| 24 |
+
"instance_id": "initial-scout_tra",
|
| 25 |
+
"queue_index": 2,
|
| 26 |
+
"queue_item_kind": "sequence",
|
| 27 |
+
"template_id": "scout_tra"
|
| 28 |
+
},
|
| 29 |
+
{
|
| 30 |
+
"allowed_in_add_sequence_menu": true,
|
| 31 |
+
"display_id": "scout_cor",
|
| 32 |
+
"instance_id": "initial-scout_cor",
|
| 33 |
+
"queue_index": 3,
|
| 34 |
+
"queue_item_kind": "sequence",
|
| 35 |
+
"template_id": "scout_cor"
|
| 36 |
+
},
|
| 37 |
+
{
|
| 38 |
+
"allowed_in_add_sequence_menu": true,
|
| 39 |
+
"display_id": "localizer_2ch",
|
| 40 |
+
"instance_id": "initial-localizer_2ch",
|
| 41 |
+
"queue_index": 4,
|
| 42 |
+
"queue_item_kind": "sequence",
|
| 43 |
+
"template_id": "localizer_2ch"
|
| 44 |
+
},
|
| 45 |
+
{
|
| 46 |
+
"allowed_in_add_sequence_menu": true,
|
| 47 |
+
"display_id": "localizer_4ch",
|
| 48 |
+
"instance_id": "initial-localizer_4ch",
|
| 49 |
+
"queue_index": 5,
|
| 50 |
+
"queue_item_kind": "sequence",
|
| 51 |
+
"template_id": "localizer_4ch"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"allowed_in_add_sequence_menu": true,
|
| 55 |
+
"display_id": "localizer_sax",
|
| 56 |
+
"instance_id": "initial-localizer_sax",
|
| 57 |
+
"queue_index": 6,
|
| 58 |
+
"queue_item_kind": "sequence",
|
| 59 |
+
"template_id": "localizer_sax"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"allowed_in_add_sequence_menu": true,
|
| 63 |
+
"display_id": "aorta_long_axis",
|
| 64 |
+
"instance_id": "initial-aorta_long_axis",
|
| 65 |
+
"queue_index": 7,
|
| 66 |
+
"queue_item_kind": "sequence",
|
| 67 |
+
"template_id": "aorta_long_axis"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"allowed_in_add_sequence_menu": true,
|
| 71 |
+
"display_id": "aorta_pc",
|
| 72 |
+
"instance_id": "initial-aorta_pc",
|
| 73 |
+
"queue_index": 8,
|
| 74 |
+
"queue_item_kind": "sequence",
|
| 75 |
+
"template_id": "aorta_pc"
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"allowed_in_add_sequence_menu": true,
|
| 79 |
+
"display_id": "cine_2ch",
|
| 80 |
+
"instance_id": "initial-cine_2ch",
|
| 81 |
+
"queue_index": 9,
|
| 82 |
+
"queue_item_kind": "sequence",
|
| 83 |
+
"template_id": "cine_2ch"
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"allowed_in_add_sequence_menu": true,
|
| 87 |
+
"display_id": "cine_4ch",
|
| 88 |
+
"instance_id": "initial-cine_4ch",
|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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{
|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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|
| 111 |
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|
| 112 |
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|
| 113 |
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|
| 114 |
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"aorta_long_axis",
|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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| 132 |
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| 133 |
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|
| 134 |
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|
| 135 |
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| 136 |
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| 137 |
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| 141 |
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| 142 |
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| 143 |
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| 144 |
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| 145 |
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| 146 |
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| 148 |
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| 149 |
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| 152 |
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| 153 |
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| 154 |
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| 155 |
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| 156 |
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|
| 157 |
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| 158 |
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|
| 159 |
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|
| 160 |
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| 161 |
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| 162 |
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| 163 |
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| 164 |
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| 165 |
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| 166 |
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| 167 |
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| 168 |
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| 169 |
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| 170 |
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| 171 |
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| 172 |
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| 173 |
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| 174 |
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| 175 |
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| 176 |
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| 177 |
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|
| 178 |
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| 179 |
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| 180 |
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| 181 |
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| 182 |
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| 183 |
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| 184 |
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|
| 185 |
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|
| 186 |
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|
| 187 |
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|
| 188 |
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|
| 189 |
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|
| 190 |
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|
| 191 |
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|
| 192 |
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|
| 193 |
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|
| 194 |
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| 195 |
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| 196 |
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| 197 |
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| 198 |
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|
| 199 |
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|
| 200 |
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|
| 201 |
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|
| 202 |
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| 203 |
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| 204 |
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| 205 |
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| 207 |
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| 208 |
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| 209 |
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| 210 |
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| 211 |
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| 212 |
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| 213 |
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|
| 214 |
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| 215 |
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|
| 216 |
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|
| 217 |
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| 218 |
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|
| 219 |
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| 220 |
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|
| 221 |
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| 222 |
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|
| 223 |
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| 224 |
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|
| 225 |
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|
| 226 |
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|
| 227 |
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| 228 |
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| 229 |
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| 230 |
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280.0
|
| 231 |
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|
| 232 |
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|
| 233 |
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|
| 234 |
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|
| 235 |
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|
| 236 |
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|
| 237 |
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| 238 |
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|
| 239 |
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| 240 |
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| 241 |
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256
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| 242 |
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| 243 |
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|
| 244 |
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| 245 |
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| 246 |
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| 247 |
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| 248 |
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|
| 249 |
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|
| 250 |
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|
| 251 |
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|
| 252 |
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| 253 |
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|
| 254 |
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|
| 255 |
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|
| 256 |
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|
| 257 |
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|
| 258 |
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|
| 259 |
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|
| 260 |
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| 261 |
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| 262 |
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|
| 263 |
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312.0
|
| 264 |
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|
| 265 |
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|
| 266 |
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|
| 267 |
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|
| 268 |
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|
| 269 |
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|
| 270 |
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| 271 |
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|
| 272 |
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| 273 |
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| 274 |
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256
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| 275 |
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| 276 |
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|
| 277 |
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|
| 278 |
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|
| 279 |
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|
| 280 |
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|
| 281 |
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|
| 282 |
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|
| 283 |
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|
| 284 |
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|
| 285 |
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|
| 286 |
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| 287 |
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|
| 288 |
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|
| 289 |
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|
| 290 |
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|
| 291 |
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| 292 |
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| 293 |
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|
| 294 |
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|
| 295 |
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|
| 296 |
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|
| 297 |
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|
| 298 |
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|
| 299 |
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|
| 300 |
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|
| 301 |
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| 302 |
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|
| 303 |
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|
| 304 |
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| 305 |
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| 306 |
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| 307 |
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|
| 308 |
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312.0
|
| 309 |
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],
|
| 310 |
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|
| 311 |
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},
|
| 312 |
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|
| 313 |
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|
| 314 |
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|
| 315 |
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|
| 316 |
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|
| 317 |
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| 318 |
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| 319 |
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256
|
| 320 |
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|
| 321 |
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|
| 322 |
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|
| 323 |
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|
| 324 |
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{
|
| 325 |
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|
| 326 |
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|
| 327 |
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],
|
| 328 |
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|
| 329 |
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},
|
| 330 |
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{
|
| 331 |
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|
| 332 |
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"sagittal_scout"
|
| 333 |
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],
|
| 334 |
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|
| 335 |
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},
|
| 336 |
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{
|
| 337 |
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|
| 338 |
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"coronal_scout"
|
| 339 |
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],
|
| 340 |
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|
| 341 |
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}
|
| 342 |
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],
|
| 343 |
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|
| 344 |
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|
| 345 |
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|
| 346 |
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},
|
| 347 |
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{
|
| 348 |
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|
| 349 |
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|
| 350 |
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|
| 351 |
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|
| 352 |
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|
| 353 |
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300.0
|
| 354 |
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],
|
| 355 |
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|
| 356 |
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|
| 357 |
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},
|
| 358 |
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|
| 359 |
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|
| 360 |
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|
| 361 |
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|
| 362 |
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},
|
| 363 |
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|
| 364 |
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256,
|
| 365 |
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256
|
| 366 |
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],
|
| 367 |
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|
| 368 |
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|
| 369 |
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|
| 370 |
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{
|
| 371 |
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|
| 372 |
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"acquired_2ch_localizer"
|
| 373 |
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],
|
| 374 |
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|
| 375 |
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},
|
| 376 |
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{
|
| 377 |
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|
| 378 |
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"acquired_4ch_localizer"
|
| 379 |
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],
|
| 380 |
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|
| 381 |
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},
|
| 382 |
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{
|
| 383 |
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|
| 384 |
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"coronal_scout"
|
| 385 |
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],
|
| 386 |
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|
| 387 |
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}
|
| 388 |
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],
|
| 389 |
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|
| 390 |
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|
| 391 |
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|
| 392 |
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},
|
| 393 |
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{
|
| 394 |
+
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|
| 395 |
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|
| 396 |
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|
| 397 |
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|
| 398 |
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260.0,
|
| 399 |
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220.0
|
| 400 |
+
],
|
| 401 |
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|
| 402 |
+
},
|
| 403 |
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"display_label": "Aortic long-axis localizer",
|
| 404 |
+
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|
| 405 |
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"spatial_slices": 1,
|
| 406 |
+
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|
| 407 |
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},
|
| 408 |
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|
| 409 |
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256,
|
| 410 |
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256
|
| 411 |
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],
|
| 412 |
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"positioning_required": true,
|
| 413 |
+
"produced_output_role": "acquired_aorta_long_axis",
|
| 414 |
+
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|
| 415 |
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{
|
| 416 |
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|
| 417 |
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"acquired_sax_localizer"
|
| 418 |
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],
|
| 419 |
+
"resolution_strategy": "latest_compatible_completed_output_role"
|
| 420 |
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}
|
| 421 |
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],
|
| 422 |
+
"sequence_kind": "combined_positioning_acquisition",
|
| 423 |
+
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|
| 424 |
+
"template_id": "aorta_long_axis"
|
| 425 |
+
},
|
| 426 |
+
{
|
| 427 |
+
"allowed_in_add_sequence_menu": true,
|
| 428 |
+
"contrast_profile_id": "truefisp-localizer-3t-v5",
|
| 429 |
+
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|
| 430 |
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"fov_mm": [
|
| 431 |
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120.0,
|
| 432 |
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120.0
|
| 433 |
+
],
|
| 434 |
+
"slice_thickness_mm": 6.0
|
| 435 |
+
},
|
| 436 |
+
"display_label": "Ascending-aortic PC plane",
|
| 437 |
+
"expected_counts": {
|
| 438 |
+
"spatial_slices": 1,
|
| 439 |
+
"temporal_frames": 1
|
| 440 |
+
},
|
| 441 |
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"expected_image_dimensions_px": [
|
| 442 |
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256,
|
| 443 |
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256
|
| 444 |
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],
|
| 445 |
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"positioning_required": true,
|
| 446 |
+
"produced_output_role": "acquired_aorta_pc",
|
| 447 |
+
"required_references": [
|
| 448 |
+
{
|
| 449 |
+
"compatible_output_roles": [
|
| 450 |
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"acquired_aorta_long_axis"
|
| 451 |
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],
|
| 452 |
+
"resolution_strategy": "latest_compatible_completed_output_role"
|
| 453 |
+
}
|
| 454 |
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],
|
| 455 |
+
"sequence_kind": "combined_positioning_acquisition",
|
| 456 |
+
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|
| 457 |
+
"template_id": "aorta_pc"
|
| 458 |
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},
|
| 459 |
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{
|
| 460 |
+
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|
| 461 |
+
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|
| 462 |
+
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|
| 463 |
+
"cardiac_phases": 20,
|
| 464 |
+
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|
| 465 |
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340.0,
|
| 466 |
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312.0
|
| 467 |
+
]
|
| 468 |
+
},
|
| 469 |
+
"display_label": "2CH cine \u00b7 20 phases",
|
| 470 |
+
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|
| 471 |
+
"spatial_slices": 1,
|
| 472 |
+
"temporal_frames": 20
|
| 473 |
+
},
|
| 474 |
+
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|
| 475 |
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256,
|
| 476 |
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256
|
| 477 |
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],
|
| 478 |
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|
| 479 |
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|
| 480 |
+
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|
| 481 |
+
{
|
| 482 |
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|
| 483 |
+
"acquired_2ch_localizer"
|
| 484 |
+
],
|
| 485 |
+
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|
| 486 |
+
}
|
| 487 |
+
],
|
| 488 |
+
"sequence_kind": "cine",
|
| 489 |
+
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|
| 490 |
+
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|
| 491 |
+
},
|
| 492 |
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{
|
| 493 |
+
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|
| 494 |
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try-it/us/synthetic-abdomen-v1/fields/attenuation_db_cm_mhz.json
ADDED
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| 1 |
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{"T_world_from_voxel_xyz":[[1.8,0,0,0],[0,1.8,0,0],[0,0,1.8,0],[0,0,0,1]],"asset_path":"arrays.zarr/attenuation-db-cm-mhz/c/0/0/0","compressed_sha256":"sha256:08bc15b6989566741bb8314fe7167c4b24702c2fbf53f538712ccdf6e7b4f124","compressed_size":95800,"dtype":"float32","endianness":"little","field_id":"attenuation_db_cm_mhz","interpolation":"linear","origin_convention":"voxel_center","outside_value":0.01,"quantity":"attenuation","schema_version":"biri-us-field-v1","shape_zyx":[96,128,128],"uncompressed_sha256":"sha256:24873d4c9f08e423e9a2af7fcbcb10534d856d4b2433d06a819084cceb6c0866","uncompressed_size":6291456,"units":"dB/(cm*MHz)"}
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try-it/us/synthetic-abdomen-v1/fields/boundary_normal_xyz.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
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{"T_world_from_voxel_xyz":[[1.8,0,0,0],[0,1.8,0,0],[0,0,1.8,0],[0,0,0,1]],"asset_path":"arrays.zarr/boundary-normal-xyz/c/0/0/0/0","compressed_sha256":"sha256:f2c38e1eb1ea86c0a1fda1f5d02a6400cb1f448cb87bfe4c0acd74d5fd82a966","compressed_size":351156,"dtype":"float32","endianness":"little","field_id":"boundary_normal_xyz","interpolation":"linear","origin_convention":"voxel_center","outside_value":0,"quantity":"boundary_normal_xyz","schema_version":"biri-us-field-v1","shape_zyx":[96,128,128],"uncompressed_sha256":"sha256:48fa9988bb31a466faa7ea70ae63b920193731de3972ab5a35e665c1ba2afa3c","uncompressed_size":18874368,"units":"1"}
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try-it/us/synthetic-abdomen-v1/fields/boundary_strength.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
+
{"T_world_from_voxel_xyz":[[1.8,0,0,0],[0,1.8,0,0],[0,0,1.8,0],[0,0,0,1]],"asset_path":"arrays.zarr/boundary-strength/c/0/0/0","compressed_sha256":"sha256:7fe0f2062db725e4f3a1dd524bddabafc5310e5f9f7de68bf99afe629b651751","compressed_size":162183,"dtype":"float32","endianness":"little","field_id":"boundary_strength","interpolation":"linear","origin_convention":"voxel_center","outside_value":0,"quantity":"boundary_strength","schema_version":"biri-us-field-v1","shape_zyx":[96,128,128],"uncompressed_sha256":"sha256:540c9daac13ed69e30731fbc94597fb35595d96878265429c2c92f43a2e3779f","uncompressed_size":6291456,"units":"1"}
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try-it/us/synthetic-abdomen-v1/fields/density_kgm3.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
+
{"T_world_from_voxel_xyz":[[1.8,0,0,0],[0,1.8,0,0],[0,0,1.8,0],[0,0,0,1]],"asset_path":"arrays.zarr/density-kgm3/c/0/0/0","compressed_sha256":"sha256:9d1f5036540222221af4fd133b84a0521a2ff45de6dfe8573a85fd1a26851eae","compressed_size":92089,"dtype":"float32","endianness":"little","field_id":"density_kgm3","interpolation":"linear","origin_convention":"voxel_center","outside_value":1.225,"quantity":"density","schema_version":"biri-us-field-v1","shape_zyx":[96,128,128],"uncompressed_sha256":"sha256:90c4f147b4e393cb193ac4bcc19764be5c808caf6250b404d9db407c096c0f85","uncompressed_size":6291456,"units":"kg/m^3"}
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try-it/us/synthetic-abdomen-v1/fields/labels.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
+
{"T_world_from_voxel_xyz":[[1.8,0,0,0],[0,1.8,0,0],[0,0,1.8,0],[0,0,0,1]],"asset_path":"arrays.zarr/labels/c/0/0/0","compressed_sha256":"sha256:dccd52e6166be31f71027b962cdc5272b3146800cca7c869717b52ef4b47e98a","compressed_size":67393,"dtype":"uint16","endianness":"little","field_id":"labels","interpolation":"nearest","origin_convention":"voxel_center","outside_value":0,"quantity":"anatomy_label","schema_version":"biri-us-field-v1","shape_zyx":[96,128,128],"uncompressed_sha256":"sha256:78c01a3654db341ac45c3f5d29ec439b3d1a2dcd6bab9c17820e0b1c7d518ffc","uncompressed_size":3145728,"units":"1"}
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try-it/us/synthetic-abdomen-v1/fields/scatter_strength.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
+
{"T_world_from_voxel_xyz":[[1.8,0,0,0],[0,1.8,0,0],[0,0,1.8,0],[0,0,0,1]],"asset_path":"arrays.zarr/scatter-strength/c/0/0/0","compressed_sha256":"sha256:d6093db80f87ee28adaa5b3904692abecdb3f9b74ec567627f025063ed313243","compressed_size":5506484,"dtype":"float32","endianness":"little","field_id":"scatter_strength","interpolation":"linear","origin_convention":"voxel_center","outside_value":0,"quantity":"scatter_strength","schema_version":"biri-us-field-v1","shape_zyx":[96,128,128],"uncompressed_sha256":"sha256:5c314d3c139c81a27343f4af884a60aa6f6c7f1212f5cca8f233fb2de6dcf6eb","uncompressed_size":6291456,"units":"1"}
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try-it/us/synthetic-abdomen-v1/fields/skin_sdf_mm.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
+
{"T_world_from_voxel_xyz":[[1.8,0,0,0],[0,1.8,0,0],[0,0,1.8,0],[0,0,0,1]],"asset_path":"arrays.zarr/skin-sdf-mm/c/0/0/0","compressed_sha256":"sha256:67f380f1aa0e4ab9ec463e02ed22dc10f621894070390b0b8cd37b75126b3ed4","compressed_size":3185021,"dtype":"float32","endianness":"little","field_id":"skin_sdf_mm","interpolation":"linear","origin_convention":"voxel_center","outside_value":1000000,"quantity":"signed_distance","schema_version":"biri-us-field-v1","shape_zyx":[96,128,128],"uncompressed_sha256":"sha256:63f05f23e516305e2a3afafff3a1026ce1971788f1a66f8d690b622fdb49af39","uncompressed_size":6291456,"units":"mm"}
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