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Merge pull request #179 from reganhayward/dualrnaseq

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README.md CHANGED
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- # ![nfcore/test-datasets](docs/images/test-datasets_logo.png)
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- Test data to be used for automated testing with the nf-core pipelines
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- ## Introduction
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- nf-core is a collection of high quality Nextflow pipelines.
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- ## Documentation
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- nf-core/test-datasets comes with documentation in the `docs/` directory:
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- 01. [Add a new test dataset](https://github.com/nf-core/test-datasets/blob/master/docs/ADD_NEW_DATA.md)
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- 02. [Use an existing test dataset](https://github.com/nf-core/test-datasets/blob/master/docs/USE_EXISTING_DATA.md)
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- ## Support
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-
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- For further information or help, don't hesitate to get in touch on our [Slack organisation](https://nf-co.re/join/slack) (a tool for instant messaging).
 
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+ # test-datasets: `dualrnaseq`
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+ Test data to be used for automated testing with nf-core pipelines
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+ This branch contains test data for the [nf-core/dualrnaseq](https://github.com/nf-core/dualrnaseq) pipeline.
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+ ## Test data
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+ Paired end data was simulated using the R package [Polyester](https://bioconductor.org/packages/release/bioc/html/polyester.html).
 
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+ Data (3 samples) was simulated from the Human genome (Gencode v33) plus *Salmonella Typhimurium (SL1344)*
 
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+ The corresponding subsets of genomes and annotation files can be found in the `references/` directory.
 
 
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- # How to add and use new test dataset
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-
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- Please fill in the appropriate checklist below (delete whatever is not relevant). These are the most common things requested when adding a new test dataset.
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-
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- - [ ] Check [here](https://github.com/nf-core/test-datasets/branches/all) that there isn't already a branch containing data that could be used
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- - If this is the case, follow the [documentation on how to use an existing test dataset](https://github.com/nf-core/test-datasets/blob/master/docs/USE_EXISTING_DATA.md)
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- - [ ] Fork the [nf-core/test-datasets repository](https://github.com/nf-core/test-datasets) to your GitHub account
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- - [ ] Create a new branch on your fork
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- - [ ] Add your test dataset
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- - [ ] Make a PR on a new branch with a relevant name
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- - [ ] Wait for the PR to be merged
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- - [ ] Use this newly created branch for your tests
 
 
 
 
 
 
 
 
 
 
 
 
 
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- # How to use an existing test dataset
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-
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- Please fill in the appropriate checklist below (delete whatever is not relevant). These are the most common things requested when adding a new test dataset.
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-
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- - [ ] Check [here](https://github.com/nf-core/test-datasets/branches/all) to find the branch corresponding to the test dataset you want to use
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- - [ ] Specify in the test.config the path to the files from the test dataset
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- - [ ] Set up your CI tests following the nf-core best practices (cf [.travis.yml template](https://github.com/nf-core/tools/blob/dev/nf_core/pipeline-template/{{cookiecutter.name_noslash}}/.travis.yml))
 
 
 
 
 
 
 
 
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+ NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACCCTAACCCTAACCCTA
169
+ ACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTA
170
+ ACCCTAACCCTAACCCTAACCCTAACCCAACCCTAACCCTAACCCTAACCCTAACCCTAA
171
+ CCCTAACCCCTAACCCTAACCCTAACCCTAACCCTAACCTAACCCTAACCCTAACCCTAA
172
+ CCCTAACCCTAACCCTAACCCTAACCCTAACCCCTAACCCTAACCCTAAACCCTAAACCC
173
+ TAACCCTAACCCTAACCCTAACCCTAACCCCAACCCCAACCCCAACCCCAACCCCAACCC
174
+ CAACCCTAACCCCTAACCCTAACCCTAACCCTACCCTAACCCTAACCCTAACCCTAACCC
175
+ TAACCCTAACCCCTAACCCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAAC
176
+ CCCTAACCCTAACCCTAACCCTAACCCTCGCGGTACCCTCAGCCGGCCCGCCCGCCCGGG
177
+ TCTGACCTGAGGAGAACTGTGCTCCGCCTTCAGAGTACCACCGAAATCTGTGCAGAGGAC
178
+ AACGCAGCTCCGCCCTCGCGGTGCTCTCCGGGTCTGTGCTGAGGAGAACGCAACTCCGCC
179
+ GTTGCAAAGGCGCGCCGCGCCGGCGCAGGCGCAGAGAGGCGCGCCGCGCCGGCGCAGGCG
180
+ CAGAGAGGCGCGCCGCGCCGGCGCAGGCGCAGAGAGGCGCGCCGCGCCGGCGCAGGCGCA
181
+ GAGAGGCGCGCCGCGCCGGCGCAGGCGCAGAGAGGCGCGCCGCGCCGGCGCAGGCGCAGA
182
+ CACATGCTAGCGCGTCGGGGTGGAGGCGTGGCGCAGGCGCAGAGAGGCGCGCCGCGCCGG
183
+ CGCAGGCGCAGAGACACATGCTACCGCGTCCAGGGGTGGAGGCGTGGCGCAGGCGCAGAG
184
+ AGGCGCACCGCGCCGGCGCAGGCGCAGAGACACATGCTAGCGCGTCCAGGGGTGGAGGCG
185
+ TGGCGCAGGCGCAGAGACGCAAGCCTACGGGCGGGGGTTGGGGGGGCGTGTGTTGCAGGA
186
+ GCAAAGTCGCACGGCGCCGGGCTGGGGCGGGGGGAGGGTGGCGCCGTGCACGCGCAGAAA
187
+ CTCACGTCACGGTGGCGCGGCGCAGAGACGGGTAGAACCTCAGTAATCCGAAAAGCCGGG
188
+ ATCGACCGCCCCTTGCTTGCAGCCGGGCACTACAGGACCCGCTTGCTCACGGTGCTGTGC
189
+ CAGGGCGCCCCCTGCTGGCGACTAGGGCAACTGCAGGGCTCTCTTGCTTAGAGTGGTGGC
190
+ CAGCGCCCCCTGCTGGCGCCGGGGCACTGCAGGGCCCTCTTGCTTACTGTATAGTGGTGG
191
+ CACGCCGCCTGCTGGCAGCTAGGGACATTGCAGGGTCCTCTTGCTCAAGGTGTAGTGGCA
192
+ GCACGCCCACCTGCTGGCAGCTGGGGACACTGCCGGGCCCTCTTGCTCCAACAGTACTGG
193
+ CGGATTATAGGGAAACACCCGGAGCATATGCTGTTTGGTCTCAGTAGACTCCTAAATATG
194
+ GGATTCCTGGGTTTAAAAGTAAAAAATAAATATGTTTAATTTGTGAACTGATTACCATCA
195
+ GAATTGTACTGTTCTGTATCCCACCAGCAATGTCTAGGAATGCCTGTTTCTCCACAAAGT
196
+ GTTTACTTTTGGATTTTTGCCAGTCTAACAGGTGAAGCCCTGGAGATTCTTATTAGTGAT
197
+ TTGGGCTGGGGCCTGGCCATGTGTATTTTTTTAAATTTCCACTGATGATTTTGCTGCATG
198
+ GCCGGTGTTGAGAATGACTGCGCAAATTTGCCGGATTTCCTTTGCTGTTCCTGCATGTAG
199
+ TTTAAACGAGATTGCCAGCACCGGGTATCATTCACCATTTTTCTTTTCGTTAACTTGCCG
200
+ TCAGCCTTTTCTTTGACCTCTTCTTTCTGTTCATGTGTATTTGCTGTCTCTTAGCCCAGA
201
+ CTTCCCGTGTCCTTTCCACCGGGCCTTTGAGAGGTCACAGGGTCTTGATGCTGTGGTCTT
202
+ CATCTGCAGGTGTCTGACTTCCAGCAACTGCTGGCCTGTGCCAGGGTGCAAGCTGAGCAC
203
+ TGGAGTGGAGTTTTCCTGTGGAGAGGAGCCATGCCTAGAGTGGGATGGGCCATTGTTCAT
204
+ CTTCTGGCCCCTGTTGTCTGCATGTAACTTAATACCACAACCAGGCATAGGGGAAAGATT
205
+ GGAGGAAAGATGAGTGAGAGCATCAACTTCTCTCACAACCTAGGCCAGTAAGTAGTGCTT
206
+ GTGCTCATCTCCTTGGCTGTGATACGTGGCCGGCCCTCGCTCCAGCAGCTGGACCCCTAC
207
+ CTGCCGTCTGCTGCCATCGGAGCCCAAAGCCGGGCTGTGACTGCTCAGACCAGCCGGCTG
208
+ GAGGGAGGGGCTCAGCAGGTCTGGCTTTGGCCCTGGGAGAGCAGGTGGAAGATCAGGCAG
209
+ GCCATCGCTGCCACAGAACCCAGTGGATTGGCCTAGGTGGGATCTCTGAGCTCAACAAGC
210
+ CCTCTCTGGGTGGTAGGTGCAGAGACGGGAGGGGCAGAGCCGCAGGCACAGCCAAGAGGG
211
+ CTGAAGAAATGGTAGAACGGAGCAGCTGGTGATGTGTGGGCCCACCGGCCCCAGGCTCCT
212
+ GTCTCCCCCCAGGTGTGTGGTGATGCCAGGCATGCCCTTCCCCAGCATCAGGTCTCCAGA
213
+ GCTGCAGAAGACGACGGCCGACTTGGATCACACTCTTGTGAGTGTCCCCAGTGTTGCAGA
214
+ GGTGAGAGGAGAGTAGACAGTGAGTGGGAGTGGCGTCGCCCCTAGGGCTCTACGGGGCCG
215
+ GCGTCTCCTGTCTCCTGGAGAGGCTTCGATGCCCCTCCACACCCTCTTGATCTTCCCTGT
216
+ GATGTCATCTGGAGCCCTGCTGCTTGCGGTGGCCTATAAAGCCTCCTAGTCTGGCTCCAA
217
+ GGCCTGGCAGAGTCTTTCCCAGGGAAAGCTACAAGCAGCAAACAGTCTGCATGGGTCATC
218
+ CCCTTCACTCCCAGCTCAGAGCCCAGGCCAGGGGCCCCCAAGAAAGGCTCTGGTGGAGAA
219
+ CCTGTGCATGAAGGCTGTCAACCAGTCCATAGGCAAGCCTGGCTGCCTCCAGCTGGGTCG
220
+ ACAGACAGGGGCTGGAGAAGGGGAGAAGAGGAAAGTGAGGTTGCCTGCCCTGTCTCCTAC
221
+ CTGAGGCTGAGGAAGGAGAAGGGGATGCACTGTTGGGGAGGCAGCTGTAACTCAAAGCCT
222
+ TAGCCTCTGTTCCCACGAAGGCAGGGCCATCAGGCACCAAAGGGATTCTGCCAGCATAGT
223
+ GCTCCTGGACCAGTGATACACCCGGCACCCTGTCCTGGACACGCTGTTGGCCTGGATCTG
224
+ AGCCCTGGTGGAGGTCAAAGCCACCTTTGGTTCTGCCATTGCTGCTGTGTGGAAGTTCAC
225
+ TCCTGCCTTTTCCTTTCCCTAGAGCCTCCACCACCCCGAGATCACATTTCTCACTGCCTT
226
+ TTGTCTGCCCAGTTTCACCAGAAGTAGGCCTCTTCCTGACAGGCAGCTGCACCACTGCCT
227
+ GGCGCTGTGCCCTTCCTTTGCTCTGCCCGCTGGAGACGGTGTTTGTCATGGGCCTGGTCT
228
+ GCAGGGATCCTGCTACAAAGGTGAAACCCAGGAGAGTGTGGAGTCCAGAGTGTTGCCAGG
229
+ ACCCAGGCACAGGCATTAGTGCCCGTTGGAGAAAACAGGGGAATCCCGAAGAAATGGTGG
230
+ GTCCTGGCCATCCGTGAGATCTTCCCAGGGCAGCTCCCCTCTGTGGAATCCAATCTGTCT
231
+ TCCATCCTGCGTGGCCGAGGGCCAGGCTTCTCACTGGGCCTCTGCAGGAGGCTGCCATTT
232
+ GTCCTGCCCACCTTCTTAGAAGCGAGACGGAGCAGACCCATCTGCTACTGCCCTTTCTAT
233
+ AATAACTAAAGTTAGCTGCCCTGGACTATTCACCCCCTAGTCTCAATTTAAGAAGATCCC
234
+ CATGGCCACAGGGCCCCTGCCTGGGGGCTTGTCACCTCCCCCACCTTCTTCCTGAGTCAT
235
+ TCCTGCAGCCTTGCTCCCTAACCTGCCCCACAGCCTTGCCTGGATTTCTATCTCCCTGGC
236
+ TTGGTGCCAGTTCCTCCAAGTCGATGGCACCTCCCTCCCTCTCAACCACTTGAGCAAACT
237
+ CCAAGACATCTTCTACCCCAACACCAGCAATTGTGCCAAGGGCCATTAGGCTCTCAGCAT
238
+ GACTATTTTTAGAGACCCCGTGTCTGTCACTGAAACCTTTTTTGTGGGAGACTATTCCTC
239
+ CCATCTGCAACAGCTGCCCCTGCTGACTGCCCTTCTCTCCTCCCTCTCATCCCAGAGAAA
240
+ CAGGTCAGCTGGGAGCTTCTGCCCCCACTGCCTAGGGACCAACAGGGGCAGGAGGCAGTC
241
+ ACTGACCCCGAGACGTTTGCATCCTGCACAGCTAGAGATCCTTTATTAAAAGCACACTGT
242
+ TGGTTTCTGCTCAGTTCTTTATTGATTGGTGTGCCGTTTTCTCTGGAAGCCTCTTAAGAA
243
+ CACAGTGGCGCAGGCTGGGTGGAGCCGTCCCCCCATGGAGCACAGGCAGACAGAAGTCCC
244
+ CGCCCCAGCTGTGTGGCCTCAAGCCAGCCTTCCGCTCCTTGAAGCTGGTCTCCACACAGT
245
+ GCTGGTTCCGTCACCCCCTCCCAAGGAAGTAGGTCTGAGCAGCTTGTCCTGGCTGTGTCC
246
+ ATGTCAGAGCAACGGCCCAAGTCTGGGTCTGGGGGGGAAGGTGTCATGGAGCCCCCTACG
247
+ ATTCCCAGTCGTCCTCGTCCTCCTCTGCCTGTGGCTGCTGCGGTGGCGGCAGAGGAGGGA
248
+ TGGAGTCTGACACGCGGGCAAAGGCTCCTCCGGGCCCCTCACCAGCCCCAGGTCCTTTCC
249
+ CAGAGATGCCTGGAGGGAAAAGGCTGAGTGAGGGTGGTTGGTGGGAAACCCTGGTTCCCC
250
+ CAGCCCCCGGAGACTTAAATACAGGAAGAAAAAGGCAGGACAGAATTACAAGGTGCTGGC
251
+ CCAGGGCGGGCAGCGGCCCTGCCTCCTACCCTTGCGCCTCATGACCAGCTTGTTGAAGAG
252
+ ATCCGACATCAAGTGCCCACCTTGGCTCGTGGCTCTCACTGCAACGGGAAAGCCACAGAC
253
+ TGGGGTGAAGAGTTCAGTCACATGCGACCGGTGACTCCCTGTCCCCACCCCCATGACACT
254
+ CCCCAGCCCTCCAAGGCCACTGTGTTTCCCAGTTAGCTCAGAGCCTCAGTCGATCCCTGA
255
+ CCCAGCACCGGGCACTGATGAGACAGCGGCTGTTTGAGGAGCCACCTCCCAGCCACCTCG
256
+ GGGCCAGGGCCAGGGTGTGCAGCACCACTGTACAATGGGGAAACTGGCCCAGAGAGGTGA
257
+ GGCAGCTTGCCTGGGGTCACAGAGCAAGGCAAAAGCAGCGCTGGGTACAAGCTCAAAACC
258
+ ATAGTGCCCAGGGCACTGCCGCTGCAGGCGCAGGCATCGCATCACACCAGTGTCTGCGTT
259
+ CACAGCAGGCATCATCAGTAGCCTCCAGAGGCCTCAGGTCCAGTCTCTAAAAATATCTCA
260
+ GGAGGCTGCAGTGGCTGACCATTGCCTTGGACCGCTCTTGGCAGTCGAAGAAGATTCTCC
261
+ TGTCAGTTTGAGCTGGGTGAGCTTAGAGAGGAAAGCTCCACTATGGCTCCCAAACCAGGA
262
+ AGGAGCCATAGCCCAGGCAGGAGGGCTGAGGACCTCTGGTGGCGGCCCAGGGCTTCCAGC
263
+ ATGTGCCCTAGGGGAAGCAGGGGCCAGCTGGCAAGAGCAGGGGGTGGGCAGAAAGCACCC
264
+ GGTGGACTCAGGGCTGGAGGGGAGGAGGCGATCTTGCCCAAGGCCCTCCGACTGCAAGCT
265
+ CCAGGGCCCGCTCACCTTGCTCCTGCTCCTTCTGCTGCTGCTTCTCCAGCTTTCGCTCCT
266
+ TCATGCTGCGCAGCTTGGCCTTGCCGATGCCCCCAGCTTGGCGGATGGACTCTAGCAGAG
267
+ TGGCCAGCCACCGGAGGGGTCAACCACTTCCCTGGGAGCTCCCTGGACTGGAGCCGGGAG
268
+ GTGGGGAACAGGGCAAGGAGGAAAGGCTGCTCAGGCAGGGCTGGGGAAGCTTACTGTGTC
269
+ CAAGAGCCTGCTGGGAGGGAAGTCACCTCCCCTCAAACGAGGAGCCCTGCGCTGGGGAGG
270
+ CCGGACCTTTGGAGACTGTGTGTGGGGGCCTGGGCACTGACTTCTGCAACCACCTGAGCG
271
+ CGGGCATCCTGTGTGCAGATACTCCCTGCTTCCTCTCTAGCCCCCACCCTGCAGAGCTGG
272
+ ACCCCTGAGCTAGCCATGCTCTGACAGTCTCAGTTGCACACACGAGCCAGCAGAGGGGTT
273
+ TTGTGCCACTTCTGGATGCTAGGGTTACACTGGGAGACACAGCAGTGAAGCTGAAATGAA
274
+ AAATGTGTTGCTGTAGTTTGTTATTAGACCCCTTCTTTCCATTGGTTTAATTAGGAATGG
275
+ GGAACCCAGAGCCTCACTTGTTCAGGCTCCCTCTGCCCTAGAAGTGAGAAGTCCAGAGCT
276
+ CTACAGTTTGAAAACCACTATTTTATGAACCAAGTAGAACAAGATATTTGAAATGGAAAC
277
+ TATTCAAAAAATTGAGAATTTCTGACCACTTAACAAACCCACAGAAAATCCACCCGAGTG
278
+ CACTGAGCACGCCAGAAATCAGGTGGCCTCAAAGAGCTGCTCCCACCTGAAGGAGACGCG
279
+ CTGCTGCTGCTGTCGTCCTGCCTGGCGCCTTGGCCTACAGGGGCCGCGGTTGAGGGTGGG
280
+ AGTGGGGGTGCACTGGCCAGCACCTCAGGAGCTGGGGGTGGTGGTGGGGGCGGTGGGGGT
281
+ GGTGTTAGTACCCCATCTTGTAGGTCTGAAACACAAAGTGTGGGGTGTCTAGGGAAGAAG
282
+ GTGTGTGACCAGGGAGGTCCCCGGCCCAGCTCCCATCCCAGAACCCAGCTCACCTACCTT
283
+ GAGAGGCTCGGCTACCTCAGTGTGGAAGGTGGGCAGTTCTGGAATGGTGCCAGGGGCAGA
284
+ GGGGGCAATGCCGGGGCCCAGGTCGGCAATGTACATGAGGTCGTTGGCAATGCCGGGCAG
285
+ GTCAGGCAGGTAGGATGGAACATCAATCTCAGGCACCTGGCCCAGGTCTGGCACATAGAA
286
+ GTAGTTCTCTGGGACCTGCAAGATTAGGCAGGGACATGTGAGAGGTGACAGGGACCTGCA
287
+ GGGGCAGCCAACAAGACCTTGTGTGCACCTCCCATGGGTGGAATAAGGGGCCCAACAGCC
288
+ TTGACTGGAGAGGAGCTCTGGCAAGGCCCTGGGCCACTGCACCTGTCTCCACCTCTGTCC
289
+ CACCCCTCCCACCTGCTGTTCCAGCTGCTCTCTCTTGCTGATGGACAAGGGGGCATCAAA
290
+ CAGCTTCTCCTCTGTCTCTGCCCCCAGCATCACATGGGTCTTTGTTACAGCACCAGCCAG
291
+ GGGGTCCAGGAAGACATACTTCTTCTACCTACAGAGGCGACATGGGGGTCAGGCAAGCTG
292
+ ACACCCGCTGTCCTGAGCCCATGTTCCTCTCCCACATCATCAGGGGCACAGCGTGCACTG
293
+ TGGGGTCCCAGGCCTCCCGAGCCGAGCCACCCGTCACCCCCTGGCTCCTGGCCTATGTGC
294
+ TGTACCTGTGTCTGATGCCCTGGGTCCCCACTAAGCCAGGCCGGGCCTCCCGCCCACACC
295
+ CCTCGGCCCTGCCCTCTGGCCATACAGGTTCTCGGTGGTGTTGAAGAGCAGCAAGGAGCT
296
+ GACAGAGCTGATGTTGCTGGGAAGACCCCCAAGTCCCTCTTCTGCATCGTCCTCGGGCTC
297
+ CGGCTTGGTGCTCACGCACACAGGAAAGTCCTTCAGCTTCTCCTGAGAGGGCCAGGATGG
298
+ CCAAGGGATGGTGAATATTTGGTGCTGGGCCTAATCAGCTGCCATCCCATCCCAGTCAGC
299
+ CTCCTCTGGGGGACAGAACCCTATGGTGGCCCCGGCTCCTCCCCAGTATCCAGTCCTCCT
300
+ GGTGTGTGACAGGCTATATGCGCGGCCAGCAGACCTGCAGGGCCCGCTCGTCCAGGGGGC
301
+ GGTGCTTGCTCTGGATCCTGTGGCGGGGGCGTCTCTGCAGGCCAGGGTCCTGGGCGCCCG
302
+ TGAAGATGGAGCCATATTCCTGCAGGCGCCCTGGAGCAGGGTACTTGGCACTGGAGAACA
303
+ CCTGTGGACACAGGGACAAGTCTGAGGGGGCCCCAAGAGGCTCAGAGGGCTAGGATTGCT
304
+ TGGCAGGAGAGGGTGGAGTTGGAAGCCTGGGCGAGAAGAAAGCTCAAGGTACAGGTGGGC
305
+ AGCAGGGCAGAGACTGGGCAGCCTCAGAGGCACGGGGAAATGGAGGGACTGCCCAGTAGC
306
+ CTCAGGACACAGGGGTATGGGGACTACCTTGATGGCCTTCTTGCTGCCCTTGATCTTCTC
307
+ AATCTTGGCCTGGGCCAAGGAGACCTTCTCTCCAATGGCCTGCACCTGGCTCCGGCTCTG
308
+ CTCTACCTGCTGGGAGATCCTGCCATGGAGAAGATCACAGAGGCTGGGCTGCTCCCCACC
309
+ CTCTGCACACCTCCTGCTTCTAACAGCAGAGCTGCCAGGCCAGGCCCTCAGGCAAGGGCT
310
+ CTGAAGTCAGGGTCACCTACTTGCCAGGGCCGATCTTGGTGCCATCCAGGGGGCCTCTAC
311
+ AAGGATAATCTGACCTGCAGGGTCGAGGAGTTGACGGTGCTGAGTTCCCTGCACTCTCAG
312
+ TAGGGACAGGCCCTATGCTGCCACCTGTACATGCTATCTGAAGGACAGCCTCCAGGGCAC
313
+ ACAGAGGATGGTATTTACACATGCACACATGGCTACTGATGGGGCAAGCACTTCACAACC
314
+ CCTCATGATCACGTGCAGCAGACAATGTGGCCTCTGCAGAGGGGGAACGGAGACCGGAGG
315
+ CTGAGACTGGCAAGGCTGGACCTGAGTGTCGTCACCTAAATTCAGACGGGGAACTGCCCC
316
+ TGCACATACTGAACGGCTCACTGAGCAAACCCCGAGTCCCGACCACCGCCTCAGTGTGGT
317
+ CTAGCTCCTCACCTGCTTCCATCCTCCCTGGTGCGGGGTGGGCCCAGTGATATCAGCTGC
318
+ CTGCTGTTCCCCAGATGTGCCAAGTGCATTCTTGTGTGCTTGCATCTCATGGAACGCCAT
319
+ TTCCCCAGACATCCCTGTGGCTGGCTCCTGATGCCCGAGGCCCAAGTGTCTGATGCTTTA
320
+ AGGCACATCACCCCACTCATGCTTTTCCATGTTCTTTGGCCGCAGCAAGGCCGCTCTCAC
321
+ TGCAAAGTTAACTCTGATGCGTGTGTAACACAACATCCTCCTCCCAGTCGCCCCTGTAGC
322
+ TCCCCTACCTCCAAGAGCCCAGCCCTTGCCCACAGGGCCACACTCCACGTGCAGAGCAGC
323
+ CTCAGCACTCACCGGGCACGAGCGAGCCTGTGTGGTGCGCAGGGATGAGAAGGCAGAGGC
324
+ GCGACTGGGGTTCATGAGGAAGGGCAGGAGGAGGGTGTGGGATGGTGGAGGGGTTTGAGA
325
+ AGGCAGAGGCGCGACTGGGGTTCATGAGGAAAGGGAGGGGGAGGATGTGGGATGGTGGAG
326
+ GGGCTGCAGACTCTGGGCTAGGGAAAGCTGGGATGTCTCTAAAGGTTGGAATGAATGGCC
327
+ TAGAATCCGACCCAATAAGCCAAAGCCACTTCCACCAACGTTAGAAGGCCTTGGCCCCCA
328
+ GAGAGCCAATTTCACAATCCAGAAGTCCCCGTGCCCTAAAGGGTCTGCCCTGATTACTCC
329
+ TGGCTCCTTGTGTGCAGGGGGCTCAGGCATGGCAGGGCTGGGAGTACCAGCAGGCACTCA
330
+ AGCGGCTTAAGTGTTCCATGACAGACTGGTATGAAGGTGGCCACAATTCAGAAAGAAAAA
331
+ AGAAGAGCACCATCTCCTTCCAGTGAGGAAGCGGGACCACCACCCAGCGTGTGCTCCATC
332
+ TTTTCTGGCTGGGGAGAGGCCTTCATCTGCTGTAAAGGGTCCTCCAGCACAAGCTGTCTT
333
+ AATTGACCCTAGTTCCCAGGGCAGCCTCGTTCTGCCTTGGGTGCTGACACGACCTTCGGT
334
+ AGGTGCATAAGCTCTGCATTCGAGGTCCACAGGGGCAGTGGGAGGGAACTGAGACTGGGG
335
+ AGGGACAAAGGCTGCTCTGTCCTGGTGCTCCCACAAAGGAGAAGGGCTGATCACTCAAAG
336
+ TTGCGAACACCAAGCTCAACAATGAGCCCTGGAAAATTTCTGGAATGGATTATTAAACAG
337
+ AGAGTCTGTAAGCACTTAGAAAAGGCCGCGGTGAGTCCCAGGGGCCAGCACTGCTCGAAA
338
+ TGTACAGCATTTCTCTTTGTAACAGGATTATTAGCCTGCTGTGCCCGGGGAAAACATGCA
339
+ GCACAGTGCATCTCGAGTCAGCAGGATTTTGACGGCTTCTAACAAAATCTTGTAGACAAG
340
+ ATGGAGCTATGGGGGTTGGAGGAGAGAACATATAGGAAAAATCAGAGCCAAATGAACCAC
341
+ AGCCCCAAAGGGCACAGTTGAACAATGGACTGATTCCAGCCTTGCACGGAGGGATCTGGC
342
+ AGAGTCCATCCAGTTCATTCAACACCTGGTTAGAAAACTGGGGCCAGCACACAGGGGAAG
343
+ GGTAAGCTGGTTTCATGATCGAATCAAGGCTCAGACAATTTTTAAAGGCCAGAGGGTAGA
344
+ CTGCAATCACCAAGATGAAATTTACAAGGAACAAATGTGAAGCCCAACATTTAGGTTTTA
345
+ AAAATCAAGCGTATAAATACAGAAGGTGGAGGGAACTTGCTTTAGACACAGTTCAGGTGA
346
+ AGAAAGACCTGGAAACTTCTGTTAACTATAAGCTCAGTAGGGGCTAAAAGCATGTTAATC
347
+ GGCATAAAAAGGCAATGAGATCTTAGGGCACACAGCTCCCCGCCCCTCTTCTGCCCTTCA
348
+ TCCTTCTTTCAATCAGCAGGGACCGTGCACTCTCTTGGAGCCACCACAGAAAACAGAGGT
349
+ GCATCCAGCACCACAGAAAACAGAGCCACCACAGAAAACAGAGGGTGACTGTCATCCCCT
350
+ CCAGTCTCTGCACACTCCCAGCTGCAGCAGAGCAGGAGGAGAGAGCACAGCCTGCAATGC
351
+ TAATTTGCCAGGAGCTCACCTGCCTGCGTCACTGGGCACAGACGCCAGTGAGGCCAGAGG
352
+ CCGGGCTGTGCTGGGGCCTGAGCCGGGTGGTGGGGAGAGAGTCTCTCCCCTGCCCCTGTC
353
+ TCTTCCGTGCAGGAGGAGCATGTTTAAGGGGACGGGTTCAAAGCTGGTCACATCCCCACC
354
+ GAAAAAGCCCATGGACAACGAAAAGCCCACTAGCTTGTCCAGTGCCACAGGAGGGGCAAG
355
+ TGGAGGAGGAGAGGTGGCGGTGCTCCCCACTCCACTGCCAGTCGTCACTGGCTCTCCCTT
356
+ CCCTTCATCCTCGTTCCCTATCTGTCACCATTTCCTGTCGTCGTTTCCTCTGAATGTCTC
357
+ ACCCTGCCCTCCCTGCTTGCAAGTCCCCTGTCTGTAGCCTCACCCCTGTCGTATCCTGAC
358
+ TACAATAACAGCTTCTGGGTGTCCCTGGCATCCACTCTCTCTCCCTTCTTGTCCCTTCCG
359
+ TGACGGATGCCTGAGGAACCTTCCCCAAACTCTTCTGTCCCATCCCTGCCCTGCTCAAAA
360
+ TCCAATCACAGCTCCCTAACACGCCTGAATCAACTTGAAGTCCTGTCTTGAGTAATCCGT
361
+ GGGCCCTAACTCACTCATCCCAACTCTTCACTCACTGCCCTGCCCCACACCCTGCCAGGG
362
+ AGCCTCCCGTGGCACCGTGGGGACACAAAGGAACCAGGGCAAAGCTCCCTCAGCCCCATT
363
+ CAAAGAGGCCTGGCCCACAGGCTCACGGAAAGTCAGCCTCTCATGCCCCGAGAGCTGAGT
364
+ GCAAGGGAGAGGCAGCGCTGTCTGTGCTTCCCATGCAGAAGCACCCCCCTCCCACCCCTG
365
+ TGCAGGCCGGCCTTCGCGGCAGACCACCATACACCACGTTCCAAGCCACACTGAGGCCTC
366
+ CCTCCAAGCCTGCAGCCCCCATTTCCAGACCCTGCCAGGGCAACCTGCATATCCACCTCC
367
+ CTACCCTGCCCCCCTCTTCCAGGAGTCTGCCCTATGTGGAGTAAGCACGTGGTTTTCCTC
368
+ TTCAGCAACTATTTCCTTTTTACTCAAGCAATGGCCCCATTTCCCTTGGGGAATCCATCT
369
+ CTCTCGCAGGCTTAGTCCCAGAGCTTCAGGTGGGGCTGCCCACAGAGCTCCTCAGTCTAA
370
+ GCCAAGTGGTGTGTCATAGTCCCCTGGCCCCATTAATGGATTCTGGGATAGACATGAGGA
371
+ CCAAGCCAGGTGGGATGAGTGAGTGTGGCTTCTGGAGGAAGTGGGGACACAGGACAGCAT
372
+ TCTTTCCTGCTGGACCTGACCCTGTGTCATGTCACCTTGCTACCACGAGAGCATGGCCTG
373
+ TCTGGGAATGCAGCCAGACCCAAAGAAGCAAACTGACATGGAAGGAAAGCAAAACCAGGC
374
+ CCTGAGGACATCATTTTAGCCCTTACTCCGAAGGCTGCTCTACTGATTGGTTAATTTTTG
375
+ CTTAGCTTGGTCTGGGGAGTTCTGACAGGCGTGCCACCAATTCTTACCGATTTCTCTCCA
376
+ CTCTAGACCCTGAGAAGCCCACGCGGTTCATGCTAGCAATTAACAATCAATCTCGCCCTA
377
+ TGTGTTCCCATTCCAGCCTCTAGGACACAGTGGCAGCCACATAATTGGTATCTCTTAAGG
378
+ TCCAGCACGAGGTGGAGCACATGGTGGAGAGACAGATGCAGTGACCTGGAACCCAGGAGT
379
+ GAGGGAGCCAGGACTCAGGCCCAAGGCTCCTGAGAGGCATCTGGCCCTCCCTGCGCTGTG
380
+ CCAGCAGCTTGGAGAACCCACACTCAATGAACGCAGCACTCCACTACCCAGGAAATGCCT
381
+ TCCTGCCCTCTCCTCATCCCATCCCTGGGCAGGGGACATGCAACTGTCTACAAGGTGCCA
382
+ AGTACCAGGACAGGAAAGGAAAGACGCCAAAAATCCAGCGCTGCCCTCAGAGAAGGGCAA
383
+ CCACGCAGTCCCCATCTTGGCAAGGAAACACAATTTCCGAGGGAATGGTTTTGGCCTCCA
384
+ TTCTAAGTGCTGGACATGGGGTGGCCATAATCTGGAGCTGATGGCTCTTAAAGACCTGCA
385
+ TCCTCTTCCCTAGGTGTCCCTCGGGCACATTTAGCACAAAGATAAGCACAAAAGGTGCAT
386
+ CCAGCACTTTGTTACTATTGGTGGCAGGTTTATGAATGGCAACCAAAGGCAGTGTACGGG
387
+ TCAAGATTATCAACAGGGAAGAGATAGCATTTCCTGAAGGCTTCCTAGGTGCCAGGCACT
388
+ GTTCCATTCCTTTGCATGTTTTGATTAATTTAATATTTAAAATAATTCTACCAGGAAGCT
389
+ ACCATTATTACCACAACTTCACAAATGAGAACACCGAGGCTTAGAGGGGTTGGGTTGCCC
390
+ AAGGTTACAGAGGAAGAAAACAGGGGAGCTGGATCTGAGCCAAGGCATCAACTCCAAGGT
391
+ AACCCCTCAGTCACTTCACTGTGTGTCCCCTGGTTACTGGGACATTCTTGACAAACTCGG
392
+ GGCAAGCCGGTGAGTCAGTGGGGGAGGACTTTCAGGAAGAGGTGGGTTCCCAGTTGGTGA
393
+ CAGAAGAGGAGGCTGCAAAGTGAAGGAGCAGGGGCTCCAGGTCTGGCGACAACCAGGGAA
394
+ GGGACAGGGCAGGGATGGCTTGGACCACGAGAGGCACCTGAGTCAGGCAGTCACATACTT
395
+ CCCACTGGGGTCTACCATGTGAGGCATGGTGTGGGATCCTGGGAAGGAGACCAAGCCTCA
396
+ TTTCAGTTTGCTTATGGCCAAAGACAGGACCTGTGTACCCGACAACCCCTGGGACCTTTA
397
+ CCAAAAAAAGAGCAAACACCATTCACTCACTCATGTTAGATAAACACTGAGTGAAGTCAC
398
+ TGGAGCCCAAGGACTGTGCGAGGTCAGCACTGCCAATACAAGAAGCTGCAGCCCTCCAGC
399
+ TCGCCTCCCTCAATGGCCACTCCGTGCTCCAGCCATGCTGGCTTCCTTTTAGGTCCTCCA
400
+ CCTCCAGGCTGTAGTTCATGTGCTTCTTTCTGGAATGTTCTTCCCAACCTACCCACTCAA
401
+ CCCTCAGACTTTACCATAAATGTCATTTCCTCACGTCTGCCTTCCCTGACCTGAGACCAA
402
+ GCCAGGCTTCCCATGACGAGCCTCACAGTACCCCATCTCCCCTGAACAGATGCAGTAATA
403
+ ACCTACATAACCCGGGGCCATGATCTATGGCTTTGAATCCTGGCTCTGTCACTAGGCCAG
404
+ GTCTCTCAGCCCTTCTGTGCCTCAGTTTCCTCATCTATAAAATGAGATGACGGCAGTGCC
405
+ TGCTCATGAAGTGTGAGTTAATGCACTCAAATCAATGGTTGTGCACGGTTTATATGAATA
406
+ TTAGTGATTACAAAATATTATCAATAGACCTTGTCACAACTGTTATTGAAGAACTAATCA
407
+ TCTATTGCTTATTTAGGTCTTTCTCTCCTGCCAGAATGTGCGCTCCAGGTGGAGAGGTAT
408
+ GTTGCCTTATCCGTGGCTGGATATATAGAGATTCCCACACTGCCTTGCACACGAGCACTG
409
+ CTGGGTAAATATTTGTTGGCTGCAGGAAAACGTGAAGGAATAGGCCCTCCAATGGGAGGA
410
+ AAAGCATGAGTTGTGAGAGCAGAGCCACCACAGGAAACCAGGAGGCTAAGTGGGGTGGAA
411
+ GGGAGTGAGCTCTCGGACTCCCAGGAGTAAAAGCTTCCAAGTTGGGCTCTCACTTCAGCC
412
+ CCTCCCACACAGGGAAGCCAGATGGGTTCCCCAGGACCGGGATTCCCCAAGGGGGCTGCT
413
+ CCCAGAGGGTGTGTTGCTGGGATTGCCCAGGACAGGGATGGCCCTCTCATCAGGTGGGGG
414
+ TGAGTGGCAGCACCCACCTGCTGAAGATGTCTCCAGAGACCTTCTGCAGGTACTGCAGGG
415
+ CATCCGCCATCTGCTGGACGGCCTCCTCTCGCCGCAGGTCTGGCTGGATGAAGGGCACGG
416
+ CATAGGTCTGACCTGCCAGGGAGTGCTGCATCCTCACAGGAGTCATGGTGCCTGTGGGTC
417
+ GGAGCCGGAGCGTCAGAGCCACCCACGACCACCGGCACGCCCCCACCACAGGGCAGCGTG
418
+ GTGTTGAGACAACACAGCCCTCATCCCAACTATGCACATAGCTTCAGCCTGCACAGATAG
419
+ GGGAGTAGGGGACAGAGCATTTGCTGAGAGGCCAGGAGCGCATAGATGGGACTCTGCTGA
420
+ TGCCTGCTGAGTGAATGAGGGAAAGGGCAGGGCCCGGGACTGGGGAATCTGTAGGGTCAA
421
+ TGGAGGAGTTCAGAGAAGGTGCAACATTTCTGACCCCCTACAAGGTGCTTGCTACCTGCC
422
+ AGGCACCCTTTCCATACCTTGTCTCAGTTCAGCTCCCCACCTTGGATAAACAAGAAACCT
423
+ TGGTTGCAGAGGAAAAAAGAGGCTGGAAACAAAGGGGTAGAAATGGGGTAGCAGGGGAGA
424
+ TTGCCTGATCAACTGCCAAATGGTACACAGTTCTGGAAAAGCACAAAAAATGTGCACACA
425
+ CGGGTTCTTCCCACTTTAACCCCTGAGGAATCTGAGGCCTGCTCCTGAAACAGACTGGGC
426
+ AGTGGCTAGTGACTCTAGGTATAGGAGTATCCAGCCCTGCTCACCCAGGCTAGAGCTTAG
427
+ GGGGACAAGAGGAAAGAGGTGCCTGTGGGGGTGGAGGACAGGAAGGAAAAACACTCCTGG
428
+ AATTGCAAAGTGAGGGCAGAGTCTATTTATATTGGGTTTAATTAACTCCTCTCCCTGGTG
429
+ CCACTAAAGCAGCAATCACACTGCAGACAGCACTGATTTGATTGGCAAGAGATGCACCAG
430
+ GCAGAATATTAAGGGACCAGGCCCCTATAAATAGGCCTAATCACAGCCCCTCACTGGAAA
431
+ ATGGTAAGGAAGACATTAATCAGGCCTGGCACTGTGCCCTAGACCTGCTCCCCTAGGCAC
432
+ TACAGTGGGGCCCTTGGTTGCAACACAAGTAGGTAGGGATGGATGAGTGTGGCATGAAGG
433
+ GCCTAGGAGATTTCACTTGGGTTTAAAATGCTGTGACCTTGAGTAAGTTGCCGTCTCTGA
434
+ ATCTGATCCTTTCGATTTCCCATTCTCCAAACTGAGAACTAGCACTGCTGAGACGTGGTT
435
+ ATTTCCAATAATAATTTGTATATTTTACATAACGCACCACACCAACATCTTCACCCAGTT
436
+ GGAGCCTACTCCTTTGCTCCCGCTGCTGGCTTCCCCAGCCCTCCCTTCTGCCCTCCTCAG
437
+ GCCAGCACTTTTCAGTGAGTTCCTCCTTTGCATACAGGCTTTCCAGATCTGTACTTGCCT
438
+ TGAATACTCATCAGAGCCCAGGAGTTACTCCTCACCTCCCACTTATTTTTCCTCCCATCA
439
+ AATAACTAAAGCATGGCCAGCTGATGCCCAGCCAACTGAGAAACCCAACCCTCTGAGACC
440
+ AGCACACCCCTTTCAAGCATGTTCCTCCCTCCCCTTCTTTGTATTTATACTGATGCAAGT
441
+ TTGCTGGCTGTCCTAACTTATTTCTGTGCCTCAGTTCTCCCATATGTAAGATCACAAAGG
442
+ GGGTAAAGATGCAAGATATTTCCTGTGCACATCTTCAGATGAATTTCTTGTTAGTGTGTG
443
+ TGTGTTTGCTCACACATATGCGTGAAAGAAGAGTACATACACAGATCTCCTCAAAAAGGA
444
+ GGCAGCAAGCCCGTTCAAGAATGGGACTGAATACACCTGATGAGTGGTTTACTTTCTGTC
445
+ TGCAAACATCTACTGATCATCTGTTAGGTGCAGGCCATGATCACAACAAAGACGAATAAG
446
+ ACACTACACTAGCCAGGGAGAGTCTCAAAAACAACTAAACTCAAATTAAATTCATTCTAC
447
+ TCCAGTCATGGGTACAAAGCTAAGGAGTGACAAATCCCTCTTGGAGTTAGGGGAGTCAGG
448
+ AAAAAGCTCTTAGCAGAATGTGTGCCTCTCGGCCGGGCGCAGCGGCTCACGCCTGTAATC
449
+ CCAGCACTTTGGGAGGCGAAGGCAGGCAGATCACCTGAGGTCGGGAGTTCGAGACCAGTC
450
+ TGACCAACATGGTGAAACTCCATCTCTACTAAAAATACAAAATTAGCCAGGCGTGGTGGT
451
+ GCATGCCTGTAATCCCCGCTACTCGGGAGGCTGAGGAAGGAGAATCACTTGAACCAGGAA
452
+ GGTGGAGGTTGCAGTGTGCCAAGATCGCGCCATGGCACTCCAGCCTAGGCAACGAGGGTG
453
+ AACCAGGTCCAGGAAGAAGGTGCAAAGACAGCATTCCAGGTAAAAGAAACAGCTTGAACA
454
+ AAAAGTGTGTAGGGGAACCGCAAGCGGTCTTGAGTGCTGAGGGTACAATCATCCTTGGGG
455
+ AAGTACTAGAAGAAAGAATGATAAACAGAGGCCAGTTTGTTAAAAACACTCAAAATTAAA
456
+ GCTAGGAGTTTGGACTTGTGGCAGGAATGAAATCCTTAGACCTGTGCTGTCCAATATGGT
457
+ AGCCACCAGGCACATGCAGCCACTGAGCACTTGAAATGTGGATAGTCTGAATTGAGATGT
458
+ GCCATAAGTGTAAAATATGCACCAAATTTCAAAGGCTAGAAAAAAAGAATGTAAAATATC
459
+ TTATTATTTTATATTGATTACGTGCTAAAATAACCATATTTGGGATATACTGGATTTTAA
460
+ AAATATATCACTAATTTCATCTGTTTCTTTTTACTTTTAGAAATCACATATGTGACTTAA
461
+ ATATTTCTTTTCTTTTTCTTTCCTCTCACTCAGCGTCCTGTGATTCCAAAGAAATGAGTC
462
+ TCTGCTGTTTTTGGGCAGCAGATATCCTAGAATGGACTCTGACCTAAGCATCAAAATTAA
463
+ TCATCATAACGTTATCATTTTATGGCCCCTTCTTCCTATATCTGGTAGCTTTTAAATGAT
464
+ GACCATGTAGATAATCTTTATTGTCCCTCTTTCAGCAGACGGTATTTTCTTATGCTACAG
465
+ TATGACTGCTAATAATACCTACACATGTTAGAACCATTCTGACTCCTCAAGAATCTCATT
466
+ TAACTCTTATTATCAGTGAATTTATCATCATCCCCTATTTTACATAAGGAAATGGGGTTA
467
+ GAAAGACCAAATAACATTTTTTCAACATCAAAACACTAGCTTGAGATCAAGCCCAGACTT
468
+ GGATCTGTCGTCTGAATTCCAAGCTTTTTGTTATTTATTGATATGTTTTGTTGTTTTCAT
469
+ GCAATAATGCAAATCTTAGCCCAAACATTTTGTTAGTAGTACCAACTGTAAGTCACCTTA
470
+ TCTTCATACTTTGTCTTTATGTAAACCTAAATTAGATCTGTTTTTGATACTGAGGGAAAA
471
+ ACAAGGGAATCTAACACTAACCAGCCCGTAGTGTGTGGTCAACACTTTCGTTACTTTAGT
472
+ ATACATCACCCCAATTGTTTGTCTTCACCACACACTTTGGAGTTAGGTAGTAGTATCTAT
473
+ TTTTACAAATAAGAAAACCCAGGCACAAAGGGGTTGATTAGCAATTATCTTTTGAAAAGC
474
+ CTGTAGTTGCTCATCTGAAGAAGTGACGGACCACCTCTTATTTAGTGGACAGACAGTAAC
475
+ TAGTTGAGAAGACAGGGGATTTTGTTGGCGGAAAAAAAAATTTATCAAAAGTCGTCTTCT
476
+ ATCAGGGAGTTTTATGAGAAACCCTAGCTCCTCAGTTCCACAGTGGGTAACTGTAATTCA
477
+ TTCTAGGTCTGCGATATTTCCTGCCTATCCATTTTGTTAACTCTTCAATGCATTCCACAA
478
+ ATACCTAAGTATTCTTTAATAATGGTGGTTTTTTTTTTTTTTTGCATCTATGAAGTTTTT
479
+ TCAAATTCTTTTTAAGTGACAAAACTTGTACATGTGTATCGCTCAATATTTCTAGTCGAC
480
+ AGCACTGCTTTCGAGAATGTAAACCGTGCACTCCCAGGAAAATGCAGACACAGCACGCCT
481
+ CTTTGGGACCGCGGTTTATACTTTCGAAGTGCTCGGAGCCCTTCCTCCAGACCGTTCTCC
482
+ CACACCCCGCTCCAGGGTCTCTCCCGGAGTTACAAGCCTCGCTGTAGGCCCCGGGAACCC
483
+ AACGCGGTGTCAGAGAAGTGGGGTCCCCTACGAGGGACCAGGAGCTCCGGGCGGGCAGCA
484
+ GCTGCGGAAGAGCCGCGCGAGGCTTCCCAGAACCCGGCAGGGGCGGGAAGACGCAGGAGT
485
+ GGGGAGGCGGAACCGGGACCCCGCAGAGCCCGGGTCCCTGCGCCCCACAAGCCTTGGCTT
486
+ CCCTGCTAGGGCCGGGCAAGGCCGGGTGCAGGGCGCGGCTCCAGGGAGGAAGCTCCGGGG
487
+ CGAGCCCAAGACGCCTCCCGGGCGGTCGGGGCCCAGCGGCGGCGTTCGCAGTGGAGCCGG
488
+ GCACCGGGCAGCGGCCGCGGAACACCAGCTTGGCGCAGGCTTCTCGGTCAGGAACGGTCC
489
+ CGGGCCTCCCGCCCGCCTCCCTCCAGCCCCTCCGGGTCCCCTACTTCGCCCCGCCAGGCC
490
+ CCCACGACCCTACTTCCCGCGGCCCCGGACGCCTCCTCACCTGCGAGCCGCCCTCCCGGA
491
+ AGCTCCCGCCGCCGCTTCCGCTCTGCCGGAGCCGCTGGGTCCTAGCCCCGCCGCCCCCAG
492
+ TCCGCCCGCGCCTCCGGGTCCTAACGCCGCCGCTCGCCCTCCACTGCGCCCTCCCCGAGC
493
+ GCGGCTCCAGGACCCCGTCGACCCGGAGCGCTGTCCTGTCGGGCCGAGTCGCGGGCCTGG
494
+ GCACGGAACTCACGCTCACTCCGAGCTCCCGACGTGCACACGGCTCCCAT
references/Human_gencode.v33_sub.gff3 ADDED
@@ -0,0 +1,20 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ##gff-version 3
2
+ #description: evidence-based annotation of the human genome (GRCh38), version 33 (Ensembl 99)
3
+ #provider: GENCODE
4
+ #contact: gencode-help@ebi.ac.uk
5
+ #format: gff3
6
+ #date: 2019-12-13
7
+ ##sequence-region chr1 1 248956422
8
+ chr1 HAVANA gene 11869 14409 . + . ID=ENSG00000223972.5;gene_id=ENSG00000223972.5;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;level=2;hgnc_id=HGNC:37102;havana_gene=OTTHUMG00000000961.2
9
+ chr1 HAVANA transcript 11869 14409 . + . ID=ENST00000456328.2;Parent=ENSG00000223972.5;gene_id=ENSG00000223972.5;transcript_id=ENST00000456328.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=processed_transcript;transcript_name=DDX11L1-202;level=2;transcript_support_level=1;hgnc_id=HGNC:37102;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000362751.1
10
+ chr1 HAVANA exon 11869 12227 . + . ID=exon:ENST00000456328.2:1;Parent=ENST00000456328.2;gene_id=ENSG00000223972.5;transcript_id=ENST00000456328.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=processed_transcript;transcript_name=DDX11L1-202;exon_number=1;exon_id=ENSE00002234944.1;level=2;transcript_support_level=1;hgnc_id=HGNC:37102;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000362751.1
11
+ chr1 HAVANA exon 12613 12721 . + . ID=exon:ENST00000456328.2:2;Parent=ENST00000456328.2;gene_id=ENSG00000223972.5;transcript_id=ENST00000456328.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=processed_transcript;transcript_name=DDX11L1-202;exon_number=2;exon_id=ENSE00003582793.1;level=2;transcript_support_level=1;hgnc_id=HGNC:37102;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000362751.1
12
+ chr1 HAVANA exon 13221 14409 . + . ID=exon:ENST00000456328.2:3;Parent=ENST00000456328.2;gene_id=ENSG00000223972.5;transcript_id=ENST00000456328.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=processed_transcript;transcript_name=DDX11L1-202;exon_number=3;exon_id=ENSE00002312635.1;level=2;transcript_support_level=1;hgnc_id=HGNC:37102;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000362751.1
13
+ chr1 HAVANA transcript 12010 13670 . + . ID=ENST00000450305.2;Parent=ENSG00000223972.5;gene_id=ENSG00000223972.5;transcript_id=ENST00000450305.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=transcribed_unprocessed_pseudogene;transcript_name=DDX11L1-201;level=2;transcript_support_level=NA;hgnc_id=HGNC:37102;ont=PGO:0000005,PGO:0000019;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000002844.2
14
+ chr1 HAVANA exon 12010 12057 . + . ID=exon:ENST00000450305.2:1;Parent=ENST00000450305.2;gene_id=ENSG00000223972.5;transcript_id=ENST00000450305.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=transcribed_unprocessed_pseudogene;transcript_name=DDX11L1-201;exon_number=1;exon_id=ENSE00001948541.1;level=2;transcript_support_level=NA;hgnc_id=HGNC:37102;ont=PGO:0000005,PGO:0000019;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000002844.2
15
+ chr1 HAVANA exon 12179 12227 . + . ID=exon:ENST00000450305.2:2;Parent=ENST00000450305.2;gene_id=ENSG00000223972.5;transcript_id=ENST00000450305.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=transcribed_unprocessed_pseudogene;transcript_name=DDX11L1-201;exon_number=2;exon_id=ENSE00001671638.2;level=2;transcript_support_level=NA;hgnc_id=HGNC:37102;ont=PGO:0000005,PGO:0000019;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000002844.2
16
+ chr1 HAVANA exon 12613 12697 . + . ID=exon:ENST00000450305.2:3;Parent=ENST00000450305.2;gene_id=ENSG00000223972.5;transcript_id=ENST00000450305.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=transcribed_unprocessed_pseudogene;transcript_name=DDX11L1-201;exon_number=3;exon_id=ENSE00001758273.2;level=2;transcript_support_level=NA;hgnc_id=HGNC:37102;ont=PGO:0000005,PGO:0000019;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000002844.2
17
+ chr1 HAVANA exon 12975 13052 . + . ID=exon:ENST00000450305.2:4;Parent=ENST00000450305.2;gene_id=ENSG00000223972.5;transcript_id=ENST00000450305.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=transcribed_unprocessed_pseudogene;transcript_name=DDX11L1-201;exon_number=4;exon_id=ENSE00001799933.2;level=2;transcript_support_level=NA;hgnc_id=HGNC:37102;ont=PGO:0000005,PGO:0000019;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000002844.2
18
+ chr1 HAVANA exon 13221 13374 . + . ID=exon:ENST00000450305.2:5;Parent=ENST00000450305.2;gene_id=ENSG00000223972.5;transcript_id=ENST00000450305.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=transcribed_unprocessed_pseudogene;transcript_name=DDX11L1-201;exon_number=5;exon_id=ENSE00001746346.2;level=2;transcript_support_level=NA;hgnc_id=HGNC:37102;ont=PGO:0000005,PGO:0000019;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000002844.2
19
+ chr1 HAVANA exon 13453 13670 . + . ID=exon:ENST00000450305.2:6;Parent=ENST00000450305.2;gene_id=ENSG00000223972.5;transcript_id=ENST00000450305.2;gene_type=transcribed_unprocessed_pseudogene;gene_name=DDX11L1;transcript_type=transcribed_unprocessed_pseudogene;transcript_name=DDX11L1-201;exon_number=6;exon_id=ENSE00001863096.1;level=2;transcript_support_level=NA;hgnc_id=HGNC:37102;ont=PGO:0000005,PGO:0000019;tag=basic;havana_gene=OTTHUMG00000000961.2;havana_transcript=OTTHUMT00000002844.2
20
+ chr1 HAVANA gene 14404 29570 . - . ID=ENSG00000227232.5;gene_id=ENSG00000227232.5;gene_type=unprocessed_pseudogene;gene_name=WASH7P;level=2;hgnc_id=HGNC:38034;havana_gene=OTTHUMG00000000958.1
references/SL1344_sub.fasta ADDED
@@ -0,0 +1,268 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ >FQ312003.1
2
+ AGAGATTACGTCTGGTTGCAAGAGATCATGACAGGGGGAATTGGTTGAAAATAAATATAT
3
+ CGCCAGCAGCACATGAACAAGTTTCGGAATGTGATCAATTTAAAAATTTATTGACTTAGG
4
+ CGGGCAGATACTTTAACCAATATAGGAATACAAGACAGACAAATAAAAATGACAGAGTAC
5
+ ACAACATCCATGAACCGCATCAGCACCACCACCATTACCACCATCACCATTACCACAGGT
6
+ AACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGAACAGTGCGG
7
+ GCTTTTTTTTCGACCAGAGATCACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGT
8
+ ACATCAGTGGCAAATGCAGAACGTTTTCTGCGTGTTGCCGATATTCTGGAAAGCAATGCC
9
+ AGGCAAGGGCAGGTAGCGACCGTACTTTCCGCCCCCGCGAAAATTACCAACCATCTGGTG
10
+ GCAATGATTGAAAAAACTATCGGCGGCCAGGATGCTTTGCCGAATATCAGCGATGCAGAA
11
+ CGTATTTTTTCTGACCTGCTCGCAGGACTTGCCAGCGCGCAGCCGGGATTCCCGCTTGCA
12
+ CGGTTGAAAATGGTTGTCGAACAAGAATTCGCTCAGATCAAACATGTTCTGCATGGTATC
13
+ AGCCTGCTGGGTCAGTGCCCGGATAGCATCAACGCCGCGCTGATTTGCCGTGGCGAAAAA
14
+ ATGTCGATCGCGATTATGGCGGGACTTCTGGAGGCGCGTGGGCATCGCGTCACGGTGATC
15
+ GATCCGGTAGAAAAATTGCTGGCGGTGGGCCATTACCTTGAATCTACCGTCGATATCGCG
16
+ GAATCGACTCGCCGTATCGCCGCCAGCCAGATCCCGGCCGATCACATGATCCTGATGGCG
17
+ GGCTTTACCGCCGGTAATGAAAAGGGTGAACTGGTGGTGCTGGGCCGTAATGGTTCCGAC
18
+ TATTCCGCCGCCGTGCTGGCCGCCTGTTTACGCGCTGACTGCTGTGAAATCTGGACTGAC
19
+ GTCGATGGCGTGTATACCTGTGACCCGCGCCAGGTGCCGGACGCCAGGCTGCTGAAATCG
20
+ ATGTCCTACCAGGAAGCGATGGAACTCTCTTACTTCGGCGCCAAAGTCCTTCACCCTCGC
21
+ ACCATTACGCCCATCGCCCAGTTCCAGATCCCCTGTCTGATTAAAAATACCGGTAATCCG
22
+ CAGGCGCCAGGAACGCTGATCGGCGCGTCCAGCGACGATGATAACCTGCCGGTTAAAGGG
23
+ ATCTCTAACCTTAACAACATGGCGATGTTTAGCGTCTCCGGCCCGGGAATGAAAGGGATG
24
+ ATTGGGATGGCGGCGCGTGTTTTCGCCGCCATGTCTCGCGCCGGGATCTCGGTGGTGCTC
25
+ ATTACCCAGTCCTCCTCTGAGTACAGCATCAGTTTCTGTGTGCCGCAGAGTGACTGCGCG
26
+ CGTGCCCGCCGTGCGATGCAGGATGAGTTCTATCTGGAGCTGAAAGAGGGGCTGCTGGAG
27
+ CCGCTGGCGGTTACGGAGCGGTTGGCGATTATCTCTGTTGTCGGCGACGGTATGCGCACG
28
+ CTACGCGGCATTTCAGCGAAATTCTTCGCCGCGCTGGCGCGGGCTAATATCAATATCGTG
29
+ GCGATCGCTCAGGGATCTTCTGAGCGTTCTATTTCTGTGGTGGTGAATAACGACGATGCC
30
+ ACCACCGGCGTGCGGGTAACGCACCAGATGCTGTTCAATACCGATCAGGTGATTGAAGTG
31
+ TTTGTCATTGGCGTCGGCGGCGTCGGCGGCGCGCTACTGGAACAGCTTAAACGTCAGCAA
32
+ ACCTGGCTGAAGAACAAGCACATCGATCTACGCGTGTGCGGCGTGGCGAACTCAAAGGCG
33
+ TTGCTAACCAATGTGCATGGCCTGAATCTGGACAACTGGCAGGCGGAACTGGCGCAAGCG
34
+ AACGCGCCGTTCAATCTGGGACGCTTAATTCGCCTGGTGAAAGAATATCATCTACTCAAT
35
+ CCGGTGATTGTTGATTGTACCTCCAGTCAGGCGGTGGCCGACCAGTATGCCGACTTCCTG
36
+ CGTGAAGGGTTCCATGTGGTGACGCCAAACAAGAAAGCGAACACCTCGTCAATGGACTAC
37
+ TACCATCAGCTACGTTTCGCCGCCGCGCAATCACGGCGCAAATTCTTGTATGACACCAAC
38
+ GTCGGCGCCGGTTTGCCGGTAATCGAAAACCTGCAAAACCTGCTGAATGCCGGTGATGAA
39
+ CTGCAAAAATTTTCCGGCATTCTTTCCGGGTCGCTCTCTTTTATTTTCGGTAAACTGGAA
40
+ GAGGGGATGAGTCTCTCACAGGCGACCGCCCTGGCGCGCGAGATGGGCTATACCGAACCC
41
+ GATCCGCGCGACGATCTTTCCGGTATGGATGTGGCGCGTAAACTGTTGATCCTCGCCCGC
42
+ GAGACGGGCCGCGAGCTGGAGCTTTCCGATATTGTGATTGAACCGGTGTTGCCGAACGAG
43
+ TTTGACGCCTCCGGCGATGTGACCGCCTTTATGGCACATCTGCCGCAGCTTGACGACGCG
44
+ TTTGCCGCCCGTGTGGCGAAAGCTCGTGATGAAGGTAAGGTATTGCGCTATGTGGGCAAT
45
+ ATCGAAGAGGATGGCGTGTGCCGCGTGAAAATTGCCGAAGTTGATGGTAACGATCCGCTC
46
+ TTCAAAGTGAAAAACGGTGAAAACGCGCTGGCGTTCTACAGCCACTATTATCAGCCCTTG
47
+ CCGTTGGTGCTGCGCGGCTACGGCGCAGGCAATGATGTGACGGCGGCGGGCGTGTTTGCC
48
+ GATCTGTTACGGACCCTCTCATGGAAGTTAGGAGTTTAACATGGTGAAAGTGTATGCCCC
49
+ GGCTTCCAGCGCGAACATGAGCGTCGGTTTCGACGTGTTGGGCGCAGCCGTCACACCCGT
50
+ TGACGGCACGTTGCTGGGCGATGTGGTATCCGTTGAAGCAGCGGACCATTTCCGTCTGCA
51
+ TAACCTGGGGCGATTTGCCGATAAACTGCCGCCGGAGCCGCGTGAAAATATTGTTTATCA
52
+ GTGCTGGGAACGTTTTTGCCAGGCATTGGGGAAAACCATCCCGGTGGCGATGACGCTGGA
53
+ AAAAAATATGCCGATTGGTTCCGGGTTAGGGTCCAGCGCCTGTTCCGTCGTCGCCGCGCT
54
+ GGTCGCGATGAATGAGCACTGCGGCAAACCGTTAAACGACACGCGTCTGTTGGCGCTGAT
55
+ GGGCGAGCTGGAAGGCCGTATCTCCGGCAGCATCCATTACGATAACGTCGCGCCGTGCTT
56
+ TCTTGGCGGTATGCAGTTGATGATTGAAGAAAACGGCATTATTAGTCAGCAGGTGCCGGG
57
+ CTTTGATGAGTGGCTATGGGTACTGGCTTATCCGGGCATTAAAGTTTCTACCGCAGAAGC
58
+ ACGGGCCATTTTGCCTGCGCAGTATCGCCGTCAGGATTGCATTGCGCATGGACGGCATCT
59
+ GGCCGGTTTTATTCACGCCTGTTACTCGCGGCAGCCGCAGCTTGCCGCCGCGCTGATGAA
60
+ AGATGTTATTGCCGAACCATACCGCGCGCGTTTACTGCCGGGCTTTAGCCAGGCGCGGCA
61
+ GGCGGTGTCGGAGATCGGCGCGCTGGCGAGCGGGATTTCCGGGTCGGGGCCGACGCTGTT
62
+ TGCGCTATGCGATAAACCGGAGACGGCGCAGCGCGTCGCGGACTGGCTGAGCAAACATTA
63
+ TCTGCAAAATCAGGAAGGCTTCGTTCATATTTGCCGGCTGGATACGGCGGGCGCACGAGT
64
+ AGTGGGATAATCAATGAAACTCTATAATCTGAAAGACCATAATGAGCAGGTCAGCTTTGC
65
+ GCAGGCCGTCACGCAAGGACTGGGCAAACAGCAGGGACTTTTTTTTCCGCACGATCTGCC
66
+ GGAGTTTAGCCTGACGGAAATTGATGAGATGCTCAACCAGGACTTTGTCAGCCGTAGCGC
67
+ AAAGATCCTCTCGGCATTTATTGGCGATGAAATACCGCAGCAAATTCTGGAAGAGCGCGT
68
+ CCGCGCGGCGTTTGCGTTCCCGGCACCGGTAGCGCAGGTAGAAAGCGATGTCGGCTGCCT
69
+ GGAGCTGTTCCATGGTCCGACGCTGGCCTTTAAAGACTTCGGCGGGCGTTTTATGGCGCA
70
+ AATGCTGACGCATATCAGCGGCGACAAACCGGTGACGATTCTGACTGCAACGTCAGGCGA
71
+ TACCGGCGCGGCGGTGGCTCACGCGTTCTATGGCCTGGAAAATGTGCGGGTCGTCATTCT
72
+ CTACCCGCGCGGTAAGATCAGTCCGTTGCAGGAAAAACTGTTCTGTACGCTGGGCGGCAA
73
+ CATTGAAACCGTGGCGATCGACGGCGATTTCGACGCGTGCCAGGCGCTGGTGAAACAGGC
74
+ ATTTGATGACGAAGAACTGAAAACGGCGCTGGGGCTGAATTCGGCTAATTCGATTAATAT
75
+ CAGCCGCCTGTTGGCGCAAATTTGCTACTACTTTGAAGCCGTGGCGCAACTGCCGCAGGG
76
+ GGCGCGTAACCAACTGGTGATCTCCGTCCCCAGCGGCAACTTTGGCGATTTGACGGCAGG
77
+ GCTGCTGGCGAAGTCGTTAGGCCTACCGGTGAAACGTTTTATCGCCGCCACCAACGTCAA
78
+ CGACACGGTGCCGCGTTTTCTGCATGACGGAAAGTGGGCGCCGAAAGCGACGCAGGCGAC
79
+ CCTGTCGAATGCGATGGATGTCAGCCAGCCGAATAACTGGCCGCGCGTGGAGGAGCTATT
80
+ CCGCCGTAAAATCTGGCGCCTGACTGAGCTGGGCTATGCGGCGGTGGATGATACTACGAC
81
+ ACAGCAGACGATGCGCGAGCTGAAAGCGAAAGGTTATATCTCGGAACCTCATGCGGCGGT
82
+ AGCGTATCGGGCATTACGCGACCAGTTAAACCCTGGCGAGTATGGCTTGTTTCTCGGAAC
83
+ GGCGCATCCGGCGAAGTTTAAAGAGAGCGTGGAGTCCATTCTGGGAGAAACGCTGGCCTT
84
+ GCCTGAAGCGCTCGCCGAACGCGCCGACCTGCCGCTGCTTTCACATCATCTGCCTGCGGA
85
+ TTTTGCCGCCCTGCGTAAGCTGATGATGACCCGCCAATAACCATTGCGCCCGGTGGCGCT
86
+ GTCGCTTACCGGGCCTATGGGGTGGTGTCGATTTGTAGGCCGGATAAGGCGTAACCGCCA
87
+ TCCGGCGATGCCGTTACTGCTCGTAGCGTTTAAAGACCAGCTCGTCTTGTGTGGAGGTTT
88
+ CTTCATCAAAGAAATACCCTTCACGGTCAAACGCGGTAAGCTGTTCCGGCTTCGTTAAGC
89
+ GGTTTTCAATAATAAAACGGCTCATCAGTCCGCGCGCTTTTTTGGCGTAGAAGCTTACCA
90
+ CCTTAAACTTGCCGTTTTTCTCATCAAGGAACACGGGCTTAATCAGTTCGGCATTCAGTT
91
+ TCTTCGGCTTCACCGATTTAAAATATTCCTCGGAGGCCAGATTCACCACCACCCGATCGC
92
+ CCTGCGCCTCAAGCGCTTCGTTGAGCTTATCGGTAATGATATCGCCCCAGAATTGATAAA
93
+ GATCTTTGCCGCGCGGATTCTCCAGGCGAATCCCCATCTCCAGACGATAAGGCTGCATTA
94
+ AATCCAGCGGGCGCAATACGCCATACAAGCCAGAGAGCATACGCAGATGTTGTTGAGCAA
95
+ AATCAAAATCCGCGTCGTTGAACGTTTCCGCCTGTAGGCCGGTATAAACATCGCCTTTGA
96
+ ACGCCAGAATCGCCTGGCGTGCATTATCCGGCGTAAAATGAGGCTGCCAGTCATGAAAAC
97
+ GCGTGGCGTTGAGATCCGCCAGTTTGTCGCTAATTCCCATCAGCCTGGAAATTTGCGGCG
98
+ CCGAAAGCTGGCGGGCCTGTTGAATAAGCTGCTGGCTGTGATCCAACAGCTCCGGCTGGG
99
+ TATAGCGGGTCGTGGCCAGCGGGCTTTGATAATCAAGCGTTTTTGCAGGTGAAATCAGAA
100
+ TCAGCATATTCAGTCCTTGCAGGGAATTTTCTGCGACTTTAGCAAAAAAACGCCGCAGAG
101
+ TTGACCGATGGTTGCGATTGTCGGCTTAATCGCGCGATGCCGCCTCCCAGGTATCTGGCG
102
+ CCAGTTGTGGTTCGATATCCGGGAAGCGCCGCGGATCGAACTGCGGTCTTACGCCCAGTT
103
+ TCCGTTGTCGCAGATAATCGCTGGCGAGGGTATACACCACCGGTGAGAGCAACAAAATCG
104
+ CCGTCAGATTGGTAATGGCCATACAGGCCATGATCATGTCAGCGAGCTGCCATATCAGCG
105
+ GAAAACTGATAAGCGTACCGGCGATAACCATGCCAAGCGTCGCAAGGCGTAATAGCCAGA
106
+ TAGCCTTTGCGTTATGTAACCGCAGAAAAAACAGATTGTTTTCGGCGTAAATATAGTTGG
107
+ CGACGATAGAACTGAACGCGAACAGAATGACGATAAGCGCGACAAAACTGGCGCCCCATT
108
+ CACCGGTCAACGAAACCATTGCATGTTGGAGAAGCTGAATGCCTTCTGTTGACGAGTGGG
109
+ ACGCGTGATTCCCCGCCAGCAGGATAATCATCGCGCTGGCGGTACAGATGATAATGGTGT
110
+ CGCTGAATACGCCAATCATTTGCACAATCCCCTGCGCGACAGGGTGAGGGGGATACGACG
111
+ TTGCCGCTGCGGCCGCATTAGGCGTTGACCCCATTCCCGCTTCATTAGAGAACATCCCAC
112
+ GCTGAAAACCGCTGGTAATAGCCTGGGTGAGCGTATATCCGGCTGCGCCTGCCGCGGCTT
113
+ CCTGCCAGCCAAATGCGCTTTTGACTATCGAGGCGATAACGCCAGGCATTTGCTCAATAT
114
+ GCCAGAGGCAAATGAATACGCTGCCGGCGACCCACAATAACGCGATGAGGGGAATCAGCC
115
+ ATTGCATCAGACGGGCGACGCCTTTGATGCCGCGAATGATAATTAACAGGGCACAGAACG
116
+ CCAGAGCAATGCCGGAGATAAGCGGCGGAATGTTGAAGGCGAAATGGAGCGCGCGTGAGA
117
+ CGGCATTCGCCTGCACGCTATTAAAAATCAACCCGTAGGCGACGAGCAGAAAGAGGGCGA
118
+ AAACCACGCCCATCCAGCGCATTCCCAGCCCACGCGCCATATACCACGCCGGGCCGCCGC
119
+ GGAACTGGCCTGTCGGGTCACGTTCTTTATAAAGCTGGGCAAGCGAACACTCGGCGAAGG
120
+ AGGTCGCCATGCCAATGATGGCCGAGACCCACATCCAGAATACCGCGCCGGGACCGCCTG
121
+ CGGCGATAGCCAGCGCCACGCCGGCCAGGTTACCGCTGCCAATCCGCGCCGCGAGGCTGG
122
+ TACACAGAGCCTGAAATGACGTCAGGCCGCCTGGCTGCGGGCTAAGGCTGCCTTTCAGAC
123
+ TGCGGCTAAATTGGCGAATATAACGAAACTGAATGAATCCGGTACGCCAGGTAAACCAAC
124
+ ATCCTGCGCCGAGCAGCAGGTAAATCATTACCGAGCCCCAGAGTATTTCGTTAATAAAAC
125
+ TGAAAAACTCAGGCATTAACGTCCCTCTTGTTGATGCCGGCACGCTTTGATAATCCTGTA
126
+ TAAGCGTGACCCATGATGTAGATGACCTTGTCAGACTAATATTAACGGCAGTTTACCATA
127
+ AATACGGTGGTATCCTTTAATTGCGCATCAACCGTCGGCAGATACGCAAACAGTGCACAA
128
+ GGGCAGCCAGGTGCATGTAGGCGGTTGCGCTGTGAGTGCGTCGTGTTATCATCAGGGTAG
129
+ ACCGGTTACATCCCCTAACAAGCTGTTTAAAGAGAAACTCTATCATGACGGACAAATTGA
130
+ CCTCCCTTCGTCAGTTCACCACCGTAGTGGCTGATACCGGAGATATCGCGGCAATGAAAC
131
+ TGTATCAGCCGCAGGATGCTACAACTAACCCTTCTCTCATTCTTAACGCAGCGCAAATCC
132
+ CGGAATATCGTAAGCTGATTGACGATGCTGTCGCCTGGGCGAAACAGCAGAGCAGCGACC
133
+ GCGCGCAGCAGGTTGTTGACGCGACCGATAAGCTGGCGGTGAATATTGGCCTGGAGATCC
134
+ TGAAGCTGGTGCCGGGGCGTATTTCTACCGAAGTTGACGCGCGTCTGTCTTATGACACTG
135
+ AAGCGTCTATCGCCAAAGCAAAACGTATCATTAAACTCTACAATGATGCGGGTATCAGCA
136
+ ACGATCGTATCCTGATCAAGCTGGCGTCCACCTGGCAGGGCATTCGTGCAGCCGAACAGC
137
+ TGGAAAAAGAAGGCATCAACTGTAACCTGACGCTGCTGTTCTCCTTCGCGCAGGCGCGTG
138
+ CGTGCGCCGAAGCGGGCGTCTACCTGATCTCGCCGTTCGTAGGTCGTATTCTTGACTGGT
139
+ ATAAAGCCAATACCGACAAGAAAGACTATGCGCCAGCTGAAGATCCGGGCGTGGTTTCCG
140
+ TAACGGAAATCTACGAGTACTACAAACAGCATGGTTACGAAACCGTCGTTATGGGCGCAA
141
+ GCTTCCGTAACGTAGGCGAAATTCTGGAGCTGGCGGGCTGCGACCGTCTGACTATCGCGC
142
+ CGGCATTGCTGAAAGAACTGGCGGAAAGCGAAGGGGCGATTGAGCGTAAGCTCTCTTTCT
143
+ CCGGCGAAGTCAAAGCGCGCCCGGAACGCATTACCGAAGCCGAGTTCCTGTGGCAGCATC
144
+ ACCAGGACCCCATGGCGGTTGACAAACTGGCGGATGGTATCCGTAAGTTTGCGGTAGACC
145
+ AGGAAAAACTGGAAAAAATGATCGGCGATCTGCTGTAATCATTAACGCGTGGCCCTGATA
146
+ TGGGTCACGCTACCTCTTCTGAAACCTGTCTGTCCTTCCCTTCGCAGTGTATCATTCTGT
147
+ TTAACGAGACTGTTTAAACGGAATAATCATGGATACCTTACGTATTGGCTTAGTTTCTAT
148
+ CTCCGACCGCGCTTCAAGCGGCGTTTACCAGGATAAAGGCATTCCTGCGCTTGAGGAGTG
149
+ GCTCGCTTCTGCGCTGACCACGCCTTTCGAGGTCCAACGGCGCTTAATTCCTGATGAACA
150
+ GGAAATTATCGAGCAAACGTTGTGTGAACTGGTCGATGAGATGAGCTGTCATCTGGTGCT
151
+ GACCACTGGCGGTACCGGTCCGGCGCGTCGCGACGTCACGCCGGACGCGACCCTTGCCAT
152
+ CGCCGACCGTGAAATGCCAGGTTTTGGCGAGCAGATGCGCCAGATCAGCCTGCGCTTTGT
153
+ GCCGACCGCCATTCTTTCCCGCCAGGTGGGCGTTATCCGTAAACAGGCGTTAATTCTTAA
154
+ TCTGCCTGGACAGCCAAAATCGATCAAAGAAACGCTGGAAGGCGTAAAAGCGGACGATGG
155
+ CAGCGTTAGCGTGCCGGGCATTTTTGCGAGCGTGCCGTATTGCATACAGCTGCTTGACGG
156
+ GCCGTATGTCGAAACCGCGCCGGAAGTGGTTGCCGCTTTCCGTCCAAAGAGCGCCAGACG
157
+ TGAGAATATGTCGGACTGACCGGAAAATACTGATAGTAGGGTTATTCCTCCCGGTGCGGG
158
+ AGGAATAAAAGAGATTTAGTGCGCCTCGCCGATTGGCAGAATAGTGCGGCCAAATTGCTC
159
+ GTTTAGCACTTCACCCATCGCCAGATAAATAGCGCTGGCGCCGCAAACCAGACCAACCCA
160
+ GCCTGCGATATGGATAGTTGCTTCGTTACCGGTGATATTGCCGACCGCCAGCAGAGCGAA
161
+ CAGTACGGTCAGGCTCAGGAAAACAAATTGCAGCGCGCGGGCGGCTTTCAGCGTACCGAA
162
+ GAACATAAACAGCGTGAACACGCCCCACAGACCTAAATAAGCGCCGAGTAGCTGAGCGTC
163
+ AGGCGCATCCGTCAGACCCATTTTCGGCATCAGCAGGATAGCGACCAGCGTCAGCCAGAA
164
+ CGAACCGTAAGAGGTAAAGGCCGTTAAACCAAAGGTATTGCCTTTTTTGTACTCCAGCAG
165
+ ACCGGCAAAAATTTGCGCGATACCGCCGTAGAAAATCCCCATCGCCAGAATAATACCGTC
166
+ CAGGGCGAAAAAACCGGCATTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCAT
167
+ CAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATAATTCCTCAAAATCATCA
168
+ TAATTGAATGGTGAAATAGTTTCCCAGAATAACGAGTTCCGTATTCGGGGCGCGGCATAA
169
+ TAATCAGGGGGAAGAGGACTGTCTATGATCTAATAAGGGGGAAAAGAAAATATTTCCCCC
170
+ AGTGAGGGCATTCACGCCTGAACGGCTGCCATCATTCGTCGCAGGCAGGCTATTTGCAAG
171
+ ACCGCCGGAATAGTCACGCGATACGCGCTGCCGCTCATCGCTTTGACGCCGTTTAACGCC
172
+ GCGCCGACCGGGCCGCCAAGACCTGCGCCGCGCAGCAATCCGTGGCCCAGGATGCTCATT
173
+ GCGGCATGGGTACGCAAAATGCGGGTAAGCTGGGTGGAAAGCAGGTGGGAGACCCCTTTT
174
+ GCCAGACTGCGATCTTTCATGAGCAGCGGCAGCAGTTCTTCCAGTTCAGAAACTTTGGCG
175
+ TCTACGGCTTGCAGAAATTCCTGCTTATGCGCCGCGTCCATCTTCTGCCAGGTATGACGT
176
+ AAAAAATGCTCCAGCAGTTGCTGTTCTATTTCAAACGTCGACATGCTTTTATCTGCTTTG
177
+ AGTTTTAGCCGTTTTGCGACATCCAGCAGAATCGCGCGGTACTGTTTTCCGTGTCCGCGC
178
+ AATTTGTTGGCGATACTGTCGCCGCCGTAATGCTGAAACTCGCCGGCAATGAGCTGCCAG
179
+ TTACGGCGGTGTTGCTCCGGGTGACCTTCCATCGCTTTGAACAGCTCGTTATGGCTAAGA
180
+ ACGCTCGACAAGCGAGCTTTGCCCTTTTCGTTATGCGTCAGCAAACGGGCGAAATCGGCG
181
+ AGTTGTTCTTCGCTACAATGCTGAAGAAAGTCTAAATCCTCGTCGTGTAAATAGGTGACG
182
+ TTCATTTTCAGTCTGGCTTTTGGAATAGAAATAACAGCGATTAATCGTCGCCAATGACTT
183
+ TAAGTCTCGCCATATCGGAAGAATTTACCGTATGGCCTGAGAAGGTAATCTTTGATACGC
184
+ AGCGTTTGTTGTCGTTATCGCTATTAATATTGATCCAGCCTGTTGTCTGGCCCTCTTTGA
185
+ TTGAGGAAGGGACGTTCAGGCTTTGGCTGGCGCTACGCGCAGTTTTAAAATAGACGGATG
186
+ CGCCGCTAAGTTCGATGTCGCCGTGATCCGCCGTGAGTTGAATGCGCTTCACGATGCGGC
187
+ AGACGGGAATTTTCAGCGTGAGATCGTTCGTTTCATTTCTGGGCATGGCAATAACACCCA
188
+ GTATTTTATGGTCGTTCGCGTGCGCGACGCTACTTAACGCCAGGCCGAAAAGCAGGCCGA
189
+ CGGAAATCGTTAACACAGATCGCATGGAATTTCTCTTTGACGGGTTCAATAAGCAATACC
190
+ GTCTATCATACTCTGCTCATGGCAACGATTCAGTTTTGTAATCTTTTCTTTTTATTACAA
191
+ TTTTTCTGTGAATGGTATTCGTTATTTAATTTATTTCATGAATATTTATCTGTCTGGTTT
192
+ TCCATCGTGCCCTCTCGTCACTAAAAAATTTTTTCATCTCCCCCTTGATGACGTGGGTTA
193
+ CGACCCCATCTTGTAGTCAACCGCAGTGGTGAGTCTGAAAAAAAACGATTCAGGGTAGTT
194
+ GAAACCGCACGTTTCGCCCTTATTACAGATTCACAACCACATGATGACCGAATTTTTAGT
195
+ GGAGACGTTTAGATGGGTAAAATTATTGGTATCGACCTGGGTACTACCAACTCTTGTGTA
196
+ GCGATTATGGATGGAACGCAGGCACGCGTGCTGGAGAACGCCGAGGGCGATCGCACTACG
197
+ CCTTCTATCATTGCTTATACCCAGGATGGTGAAACTCTGGTTGGTCAGCCGGCTAAACGT
198
+ CAGGCAGTGACAAACCCGCAAAACACCCTGTTTGCGATTAAACGCCTGATTGGCCGCCGC
199
+ TTCCAGGACGAAGAAGTTCAACGTGACGTTTCTATCATGCCGTACAAAATCATCGGCGCC
200
+ GACAACGGCGACGCATGGCTTGATGTGAAAGGTCAGAAAATGGCGCCGCCGCAGATTTCT
201
+ GCCGAAGTGCTGAAGAAAATGAAGAAAACGGCTGAAGATTATCTGGGCGAACCGGTAACT
202
+ GAAGCGGTTATCACCGTACCGGCTTACTTTAACGATGCGCAGCGTCAGGCAACCAAAGAT
203
+ GCTGGTCGTATCGCGGGGCTGGAAGTTAAACGTATCATCAACGAACCGACTGCCGCAGCG
204
+ CTGGCTTACGGTCTGGATAAAGAAGTCGGCAACCGTACTATCGCGGTTTACGACCTCGGT
205
+ GGTGGTACTTTCGATATCTCTATTATCGAAATCGACGAAGTTGATGGCGAAAAAACCTTT
206
+ GAAGTTCTGGCAACCAACGGTGATACCCACCTGGGTGGTGAAGACTTCGATACCCGCCTG
207
+ ATCAACTACCTCGTTGACGAGTTTAAGAAAGATCAGGGCATTGACCTGCGTAACGATCCG
208
+ CTGGCTATGCAGCGCCTGAAAGAAGCCGCAGAAAAAGCCAAAATCGAGCTGTCTTCTGCG
209
+ CAGCAGACCGACGTGAACCTGCCGTACATTACCGCAGATGCCACCGGTCCGAAACACATG
210
+ AACATCAAAGTGACTCGTGCGAAACTGGAAAGCCTGGTTGAAGATCTGGTGAACCGTTCT
211
+ ATCGAGCCGCTGAAAGTCGCACTGCAGGACGCTGGCCTGTCCGTGTCTGATATCAACGAC
212
+ GTGATCCTCGTTGGCGGTCAGACCCGTATGCCAATGGTGCAGAAAAAAGTGGCTGAGTTC
213
+ TTTGGTAAAGAGCCGCGTAAAGACGTTAACCCGGACGAAGCTGTGGCTATCGGCGCAGCG
214
+ GTACAGGGCGGCGTGTTGACCGGTGATGTGAAAGACGTACTGCTGCTGGACGTTACCCCG
215
+ CTGTCTCTGGGTATCGAAACGATGGGTGGCGTGATGACTCCGCTTATCACCAAAAACACC
216
+ ACCATCCCGACCAAGCACAGCCAGGTGTTCTCTACTGCGGAAGACAACCAGTCTGCGGTA
217
+ ACCATCCATGTGCTGCAGGGTGAGCGTAAGCGTGCGTCTGATAACAAATCTCTGGGTCAG
218
+ TTCAACCTGGATGGCATCAACCCGGCGCCGCGCGGTATGCCGCAGATCGAAGTCACCTTC
219
+ GATATCGATGCTGACGGTATCCTGCACGTCTCCGCGAAAGATAAAAATAGCGGTAAAGAG
220
+ CAGAAGATCACTATCAAGGCGTCTTCTGGTCTGAACGAGGAAGAAATTCAGAAAATGGTT
221
+ CGCGATGCAGAAGCGAACGCTGAATCCGACCGTAAGTTCGAAGAGCTGGTTCAGACCCGT
222
+ AACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGATAAA
223
+ CTGCCGGCTGATGACAAAACCGCTATCGAGTCTGCCCTGAACGCGCTGGAAACTGCCCTG
224
+ AAAGGCGAAGATAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCGCAGGTTTCCCAG
225
+ AAACTGATGGAAATCGCTCAGCAGCAACATGCGCAGCAGCAGGCTGGCTCCGCTGACGCT
226
+ TCTGCAAACAACGCGAAAGATGACGACGTTGTCGACGCTGAGTTTGAAGAAGTAAAAGAT
227
+ AAAAAATAATCGCCCTTTGAACGGGTAATTACTGGCACGGGCGAAGAGGTTTCCTCTCCG
228
+ CCCGTGTATGCATGTTAAGGGCAGATAAAAAGAGATGGCGAAAAGAGATTACTACGAGAT
229
+ TTTAGGCGTTTCCAAAACAGCGGAAGAGCGTGAAATCAAAAAGGCGTATAAGCGCCTGGC
230
+ CATGAAATATCATCCGGACCGCAATCAGGGTGATAAAGAGGCCGAAGCTAAGTTTAAAGA
231
+ GATTAAAGAAGCCTACGAAGTGCTGACCGATGCGCAAAAACGCGCAGCCTACGATCAGTA
232
+ TGGTCACGCCGCGTTTGAACAAGGCGGTATGGGCGGCGGATTTGGCGGCGGCTTTAATGG
233
+ CGGCGCTGATTTCAGTGATATCTTTGGTGACGTTTTTGGCGATATCTTTGGCGGCGGGCG
234
+ TGGTCGCCAACGTGCGGCGCGTGGGGCTGATTTGCGTTATAACATGGATCTCACCCTGGA
235
+ AGAAGCGGTGCGTGGCGTGACCAAAGAGATCCGTATTCCGACGCTGGAGGAGTGCGACGT
236
+ TTGCCACGGCAGCGGCGCGAAAGCTGGCACGCAACCGCAAACCTGTCCGACCTGTCATGG
237
+ TTCTGGTCAGGTACAGATGCGCCAGGGATTCTTTGCTGTACAGCAGACCTGCCCACACTG
238
+ TCAGGGACGCGGTACGCTGATCAAAGATCCGTGCCATAAATGTCACGGTCATGGGCGTGT
239
+ TGAAAAGAGTAAAACTCTGTCCGTTAAAATCCCGGCGGGCGTGGATACCGGCGATCGTAT
240
+ TCGTCTGGCAGGCGAGGGCGAAGCGGGCGAGCATGGCGCACCGGCAGGCGACTTGTACGT
241
+ TCAGGTCCAGGTGAAACAACACCCTATTTTCGAGCGTGAAGGCAATAATCTTTATTGCGA
242
+ AGTGCCGATCAACTTTGCGATGGCGGCGCTCGGCGGTGAAATTGAAGTGCCGACGTTAGA
243
+ TGGTCGCGTGATGCTGAAAGTACCGAGCGAAACACAAACGGGCAAGCTGTTCCGTATGCG
244
+ CGGCAAAGGCGTGAAGTCCGTACGCGGTGGCGCGCAGGGCGATTTGCTGTGCCGTGTGGT
245
+ AGTTGAAACGCCGGTCGGTCTGAGCGAAAAACAGAAGCAATTGCTAAAAGATCTTCAGGA
246
+ AAGTTTTGGCGGCCCGACGGGAGAGAAAAACAGCCCGCGTTCAAAAAGCTTCTTTGACGG
247
+ CGTGAAAAAATTCTTTGACGATTTGACTCGCTAATCTTTTCCCGTTGTATTTTTCTTCAG
248
+ CCCGGGTGTATATCCGGGCTTTTTTCTGCCTGTACGCGCCCAGGCTTCTGTTAAACGCAT
249
+ CGTATCCTCTCATTTGTTGATATTTTGTTTTTACTGATAAACAAATTGATGTTAATCAGC
250
+ AGTTTTGTATACGCTTATTCTTTAAAAAAACGTGATGTGATGACATTAATGATTGCTTTT
251
+ TTAGATGCTGTGAATTGATTTATCTTGAGTATTATCTATATTGCTTTTTTTAGTTTCCGG
252
+ AGGCAGACAGCGAATGGGATCGAAAGGTGCCAACAAGAGCTTTGATTATAATTTAATCAA
253
+ AATTCTTGACGCTGTTATTTTGTCAGGAAATGCGGCTATGGCGGCAAAAAAGTTAGGCAT
254
+ TACACCGGCTGCCGTTTCTCTGGCGTTAAAGCGCCTGCAGAGTTATTACCCGGAGGAACT
255
+ GTTTAGCAGAGGGAAAGGCGGGCTCATCCCCACAGCTAAGGCTGTCGACATTCACCAAAA
256
+ TTTCAGTCAGGTGATGAAACTGGTGGATGATACATTTCTCTGTAATAGCAAAAAAGATGA
257
+ AGCGTTCCAGATAACGTTATTAGGCAGTGATATTGTTGAAAGCTATTATCTTTCTCAGCT
258
+ CTATAACAGCGATATATTTGACCGTATTTTGATAAATCATTTCTCCGTAAGAAATATGAG
259
+ TCGGGAGCATATCAGCGAACTTCTGTTTACTGCGCAAGGCGATCTGTTGATTAGTGCCGA
260
+ ACCTTTGCTGGAGTCCGGCATAGAGAATCAAATCATTGATAGTTTTAAATCATTTGTTTG
261
+ TATCTGCAGCAGTAAACACATGCTGAGTACCCTCTCACAACTGTCGCTACATCATTTTTA
262
+ TTCTTCGCGTCATGCGTTATATCAGCCGGGGATGGGGGCTTCAGTGATATATCATGATAG
263
+ CGAATTATTTAAGGATGATCTTTACTATACTGGCAGGCGTATTGTCGGCTATCGCAGTGA
264
+ TTCGCTTAACGGTTTGATGAGCATGATCGAACGAACCTCATTGATTGCATTGATGCCTTT
265
+ GAAATTAGCGCTTTTTTATAAAAATCATCGTAAATATGACATTAAATTTATTCAGCCTCC
266
+ GCCCGAACTGGCTTTGAAGTCAGTTCAGGTCTATGCATCCTGGAATAAAAATAGTAGAAA
267
+ TATATCGACGATTAATGAGATGGTAAGTATGTTACAAACACTTTCCTCCTTCCGTCGCTA
268
+ A
references/SL1344_sub.gff3 ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ##sequence-region FQ312003.1 1 4878012
2
+ ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=216597
3
+ FQ312003.1 EMBL region 1 4878012 . + . ID=FQ312003.1:1..4878012;Dbxref=taxon:216597;Is_circular=true;gbkey=Src;mol_type=genomic DNA;strain=SL1344
4
+ FQ312003.1 EMBL gene 169 255 . + . ID=gene-SL1344_0001;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=SL1344_0001
5
+ FQ312003.1 EMBL CDS 169 255 . + 0 ID=cds-CBW16102.1;Parent=gene-SL1344_0001;Dbxref=EnsemblGenomes-Gn:SL1344_0001,EnsemblGenomes-Tr:CBW16102,GOA:E1W7M4,InterPro:IPR011720,UniProtKB/TrEMBL:E1W7M4,NCBI_GP:CBW16102.1;Name=CBW16102.1;gbkey=CDS;gene=thrL;inference=similar to AA sequence:INSD:CBG23019.1;locus_tag=SL1344_0001;product=thr operon leader peptide;protein_id=CBW16102.1;transl_table=11
6
+ FQ312003.1 EMBL gene 337 2799 . + . ID=gene-SL1344_0002;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=SL1344_0002
7
+ FQ312003.1 EMBL CDS 337 2799 . + 0 ID=cds-CBW16103.1;Parent=gene-SL1344_0002;Dbxref=EnsemblGenomes-Gn:SL1344_0002,EnsemblGenomes-Tr:CBW16103,GOA:E1W7M5,InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR001342,InterPro:IPR002912,InterPro:IPR005106,InterPro:IPR011147,InterPro:IPR016040,InterPro:IPR018042,InterPro:IPR019811,InterPro:IPR027795,UniProtKB/TrEMBL:E1W7M5,NCBI_GP:CBW16103.1;Name=CBW16103.1;gbkey=CDS;gene=thrA;inference=similar to AA sequence:INSD:CBG23020.1;locus_tag=SL1344_0002;product=aspartokinase I/homoserine dehydrogenase I;protein_id=CBW16103.1;transl_table=11
8
+ FQ312003.1 EMBL gene 2801 3730 . + . ID=gene-SL1344_0003;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=SL1344_0003
9
+ FQ312003.1 EMBL CDS 2801 3730 . + 0 ID=cds-CBW16104.1;Parent=gene-SL1344_0003;Dbxref=EnsemblGenomes-Gn:SL1344_0003,EnsemblGenomes-Tr:CBW16104,GOA:E1W7M6,InterPro:IPR000870,InterPro:IPR006203,InterPro:IPR006204,InterPro:IPR013750,InterPro:IPR014721,InterPro:IPR020568,UniProtKB/TrEMBL:E1W7M6,NCBI_GP:CBW16104.1;Name=CBW16104.1;gbkey=CDS;gene=thrB;inference=similar to AA sequence:INSD:CBG23021.1;locus_tag=SL1344_0003;product=Homoserine kinase;protein_id=CBW16104.1;transl_table=11
10
+ FQ312003.1 EMBL gene 3734 5020 . + . ID=gene-SL1344_0004;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=SL1344_0004
11
+ FQ312003.1 EMBL CDS 3734 5020 . + 0 ID=cds-CBW16105.1;Parent=gene-SL1344_0004;Dbxref=EnsemblGenomes-Gn:SL1344_0004,EnsemblGenomes-Tr:CBW16105,GOA:E1W7M7,InterPro:IPR000634,InterPro:IPR001926,InterPro:IPR004450,InterPro:IPR029144,UniProtKB/TrEMBL:E1W7M7,NCBI_GP:CBW16105.1;Name=CBW16105.1;gbkey=CDS;gene=thrC;inference=similar to AA sequence:INSD:CBG23022.1;locus_tag=SL1344_0004;product=threonine synthase;protein_id=CBW16105.1;transl_table=11
12
+ FQ312003.1 EMBL gene 5114 5887 . - . ID=gene-SL1344_0005;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=SL1344_0005
13
+ FQ312003.1 EMBL CDS 5114 5887 . - 0 ID=cds-CBW16106.1;Parent=gene-SL1344_0005;Dbxref=EnsemblGenomes-Gn:SL1344_0005,EnsemblGenomes-Tr:CBW16106,InterPro:IPR005583,UniProtKB/TrEMBL:E1W7M8,NCBI_GP:CBW16106.1;Name=CBW16106.1;gbkey=CDS;gene=yaaA;inference=similar to AA sequence:INSD:CBG23023.1;locus_tag=SL1344_0005;product=conserved hypothetical protein;protein_id=CBW16106.1;transl_table=11
14
+ FQ312003.1 EMBL gene 5966 7396 . - . ID=gene-SL1344_0006;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;locus_tag=SL1344_0006
15
+ FQ312003.1 EMBL CDS 5966 7396 . - 0 ID=cds-CBW16107.1;Parent=gene-SL1344_0006;Dbxref=EnsemblGenomes-Gn:SL1344_0006,EnsemblGenomes-Tr:CBW16107,GOA:E1W7M9,InterPro:IPR001463,UniProtKB/TrEMBL:E1W7M9,NCBI_GP:CBW16107.1;Name=CBW16107.1;gbkey=CDS;gene=yaaJ;inference=similar to AA sequence:INSD:CBG23024.1;locus_tag=SL1344_0006;product=hypothetical amino-acid transport protein;protein_id=CBW16107.1;transl_table=11
16
+ FQ312003.1 EMBL gene 7665 8618 . + . ID=gene-SL1344_0007;Name=talB;gbkey=Gene;gene=talB;gene_biotype=protein_coding;locus_tag=SL1344_0007
17
+ FQ312003.1 EMBL CDS 7665 8618 . + 0 ID=cds-CBW16108.1;Parent=gene-SL1344_0007;Dbxref=EnsemblGenomes-Gn:SL1344_0007,EnsemblGenomes-Tr:CBW16108,GOA:E1W7N0,InterPro:IPR001585,InterPro:IPR004730,InterPro:IPR013785,InterPro:IPR018225,UniProtKB/TrEMBL:E1W7N0,NCBI_GP:CBW16108.1;Name=CBW16108.1;gbkey=CDS;gene=talB;inference=similar to AA sequence:INSD:CBG23025.1;locus_tag=SL1344_0007;product=transaldolase B;protein_id=CBW16108.1;transl_table=11
18
+ FQ312003.1 EMBL gene 8729 9319 . + . ID=gene-SL1344_0008;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;gene_synonym=mogA;locus_tag=SL1344_0008
19
+ FQ312003.1 EMBL CDS 8729 9319 . + 0 ID=cds-CBW16109.1;Parent=gene-SL1344_0008;Dbxref=EnsemblGenomes-Gn:SL1344_0008,EnsemblGenomes-Tr:CBW16109,GOA:E1W7N1,InterPro:IPR001453,InterPro:IPR008284,InterPro:IPR020817,UniProtKB/TrEMBL:E1W7N1,NCBI_GP:CBW16109.1;Name=CBW16109.1;gbkey=CDS;gene=mog;inference=similar to AA sequence:INSD:CBG23026.1;locus_tag=SL1344_0008;product=molybdopterin biosynthesis Mog protein;protein_id=CBW16109.1;transl_table=11
20
+ FQ312003.1 EMBL gene 9376 9942 . - . ID=gene-SL1344_0009;Name=yaaH;gbkey=Gene;gene=yaaH;gene_biotype=protein_coding;locus_tag=SL1344_0009
21
+ FQ312003.1 EMBL CDS 9376 9942 . - 0 ID=cds-CBW16110.1;Parent=gene-SL1344_0009;Dbxref=EnsemblGenomes-Gn:SL1344_0009,EnsemblGenomes-Tr:CBW16110,GOA:E1W7N2,InterPro:IPR000791,UniProtKB/TrEMBL:E1W7N2,NCBI_GP:CBW16110.1;Name=CBW16110.1;gbkey=CDS;gene=yaaH;inference=similar to AA sequence:INSD:CBG23027.1;locus_tag=SL1344_0009;product=conserved hypothetical protein;protein_id=CBW16110.1;transl_table=11
22
+ FQ312003.1 EMBL gene 10092 10805 . - . ID=gene-SL1344_0010;Name=htgA;gbkey=Gene;gene=htgA;gene_biotype=protein_coding;locus_tag=SL1344_0010
23
+ FQ312003.1 EMBL CDS 10092 10805 . - 0 ID=cds-CBW16111.1;Parent=gene-SL1344_0010;Dbxref=EnsemblGenomes-Gn:SL1344_0010,EnsemblGenomes-Tr:CBW16111,InterPro:IPR021150,InterPro:IPR025217,UniProtKB/TrEMBL:E1W7N3,NCBI_GP:CBW16111.1;Name=CBW16111.1;gbkey=CDS;gene=htgA;inference=similar to AA sequence:INSD:CBG23028.1;locus_tag=SL1344_0010;product=conserved hypothetical protein;protein_id=CBW16111.1;transl_table=11
24
+ FQ312003.1 EMBL gene 10841 11245 . - . ID=gene-SL1344_0011;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=SL1344_0011
25
+ FQ312003.1 EMBL CDS 10841 11245 . - 0 ID=cds-CBW16112.1;Parent=gene-SL1344_0011;Dbxref=EnsemblGenomes-Gn:SL1344_0011,EnsemblGenomes-Tr:CBW16112,InterPro:IPR020240,UniProtKB/TrEMBL:E1W7N4,NCBI_GP:CBW16112.1;Name=CBW16112.1;gbkey=CDS;gene=yaaI;inference=similar to AA sequence:INSD:CBG23029.1;locus_tag=SL1344_0011;product=conserved hypothetical protein;protein_id=CBW16112.1;transl_table=11
26
+ FQ312003.1 EMBL gene 11593 13509 . + . ID=gene-SL1344_0012;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=SL1344_0012
27
+ FQ312003.1 EMBL CDS 11593 13509 . + 0 ID=cds-CBW16113.1;Parent=gene-SL1344_0012;Dbxref=EnsemblGenomes-Gn:SL1344_0012,EnsemblGenomes-Tr:CBW16113,GOA:E1W7N5,InterPro:IPR012725,InterPro:IPR013126,InterPro:IPR018181,InterPro:IPR029047,InterPro:IPR029048,UniProtKB/TrEMBL:E1W7N5,NCBI_GP:CBW16113.1;Name=CBW16113.1;gbkey=CDS;gene=dnaK;inference=similar to AA sequence:INSD:CBG23030.1;locus_tag=SL1344_0012;product=Chaperone protein dnaK;protein_id=CBW16113.1;transl_table=11
28
+ FQ312003.1 EMBL gene 13595 14734 . + . ID=gene-SL1344_0013;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=SL1344_0013
29
+ FQ312003.1 EMBL CDS 13595 14734 . + 0 ID=cds-CBW16114.1;Parent=gene-SL1344_0013;Dbxref=EnsemblGenomes-Gn:SL1344_0013,EnsemblGenomes-Tr:CBW16114,GOA:E1W7N6,InterPro:IPR001305,InterPro:IPR001623,InterPro:IPR002939,InterPro:IPR008971,InterPro:IPR012724,InterPro:IPR018253,UniProtKB/TrEMBL:E1W7N6,NCBI_GP:CBW16114.1;Name=CBW16114.1;gbkey=CDS;gene=dnaJ;inference=similar to AA sequence:INSD:CBG23031.1;locus_tag=SL1344_0013;product=DnaJ protein;protein_id=CBW16114.1;transl_table=11
30
+ FQ312003.1 EMBL gene 15014 15961 . + . ID=gene-SL1344_0014;Name=SL1344_0014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SL1344_0014