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nf-core
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magmap

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magmap / testdata

566 kB

13 contributors

History: 19 commits

Daniel Lundin

Adding CheckM data

c657243 about 2 years ago

GCA_002688505.1_ASM268850v1_genomic.fna.gz

69.6 kB
Minimum test data for magmap over 4 years ago
GCA_002688505.1_ASM268850v1_genomic.gff.gz

89.3 kB
Minimum test data for magmap over 4 years ago
GCF_004296495.1_ASM429649v1_genomic.fna.gz

51.7 kB
Minimum test data for magmap over 4 years ago
GCF_004296495.1_ASM429649v1_genomic.gff.gz

65.2 kB
Minimum test data for magmap over 4 years ago
ar53_metadata.tsv

4.8 kB
Adding test GTDB metadata about 2 years ago
assembly_summary_genbank.txt

1.83 kB
Remove spaces about 2 years ago
assembly_summary_refseq.txt

3.16 kB
Add refseq entry about 2 years ago
bac120_metadata.tsv

12.1 kB
Adding test GTDB metadata about 2 years ago
checkm.lineage_wf.qa_2.tsv

705 Bytes
Adding CheckM data about 2 years ago
genometest.csv

252 Bytes
new test-case about 2 years ago
gtdbtk.ar122.summary.tsv

389 Bytes
CheckM and GTDBtk data over 4 years ago
gtdbtk.bac120.summary.tsv

2.07 kB
CheckM and GTDBtk data over 4 years ago
ncbi_accessions.tsv

32 Bytes
Test data with NCBI accessions over 4 years ago
ncbi_assembly_summaries.txt

179 Bytes
Adding smaller NCBI files about 2 years ago
rrna.fna.gz

1.12 kB
Adding rrna file over 4 years ago
s0_1.fastq.gz

15.1 kB
xet

Increased quality scores over 4 years ago
s0_2.fastq.gz

15.1 kB
xet

Increased quality scores over 4 years ago
s1_1.fastq.gz

15 kB
xet

Increased quality scores over 4 years ago
s1_2.fastq.gz

15.1 kB
xet

Increased quality scores over 4 years ago
s2_1.fastq.gz

29.9 kB
xet

s2 reads were not paired over 4 years ago
s2_2.fastq.gz

29.9 kB
xet

s2 reads were not paired over 4 years ago
sourmash_k21.index.sbt.zip
Pickle imports
- No problematic imports detected
What is a pickle import?
67.6 kB
Move the index about 2 years ago
sourmash_test.index.sbt.zip
Pickle imports
- No problematic imports detected
What is a pickle import?
75.6 kB
new test about 2 years ago