#!/usr/bin/env python3 """ build_mixed_dataset.py — Five-source mixed pre-training corpus builder. Sources ------- SLTrans local parquet (balanced language x IR-type) --sltrans-tokens peS2o allenai/peS2o (open scientific papers) --pes2o-tokens TheStack (code) bigcode/the-stack, non-LLVM languages --stack-tokens TheStack (LLVM) bigcode/the-stack, lang=llvm (unpaired IR) --stack-llvm-tokens OpenWebMath open-web-math/open-web-math (math web text) --owm-tokens Set any cap to 0 to skip that source. TheStack code and LLVM IR are streamed from the same HF dataset but kept as separate shards (the_stack-*.jsonl vs stack_llvm-*.jsonl) so downstream pipelines can weight them independently. Output ------ JSONL shards under --output-dir, one filename prefix per source: sltrans-00000.jsonl, pes2o-00000.jsonl, the_stack-00000.jsonl, ... Each record: {"text": "...", "source": "...", "meta": {...}, "est_tokens": N} Plus manifest.json summarising the run. Usage ----- pip install "datasets>=2.18" pyarrow pandas tqdm huggingface-cli login # peS2o and the-stack are gated python build_mixed_dataset.py python build_mixed_dataset.py --sltrans-tokens 500e6 --owm-tokens 200e6 python build_mixed_dataset.py --stack-tokens 0 # skip code python build_mixed_dataset.py --stack-langs python,rust,go python build_mixed_dataset.py --stack-llvm-tokens 100e6 # 100M unpaired IR """ from __future__ import annotations import argparse import json import random import re import socket import sys import time from pathlib import Path import pandas as pd import pyarrow.parquet as pq from tqdm import tqdm socket.setdefaulttimeout(90) # ── constants ────────────────────────────────────────────────────────────────── SLTRANS_PROBE_ROWS = 200 SLTRANS_SKIP_DIRS = {".venv", "__pycache__", ".git"} THE_STACK_LANGS = [ "python", "c", "c++", "rust", "go", "java", "javascript", "typescript", ] _TRANSIENT_ERRORS = ("ssl", "timeout", "handshake", "connection", "timed out") # ── token estimation ─────────────────────────────────────────────────────────── def estimate_tokens(text: str) -> int: return int(len(text.split()) * 1.5) # ── JSONL shard writer ───────────────────────────────────────────────────────── class ShardWriter: def __init__(self, out_dir: Path, prefix: str, records_per_shard: int): out_dir.mkdir(parents=True, exist_ok=True) self._dir, self._pfx, self._rps = out_dir, prefix, records_per_shard self._idx = self._n = 0 self._fh = None self._roll() def _roll(self): if self._fh: self._fh.close() self._fh = (self._dir / f"{self._pfx}-{self._idx:05d}.jsonl").open("w", encoding="utf-8") self._n = 0 self._idx += 1 def write(self, record: dict): self._fh.write(json.dumps(record, ensure_ascii=False) + "\n") self._n += 1 if self._n >= self._rps: self._roll() def close(self): if self._fh: self._fh.close() self._fh = None # ── SLTrans (local parquet) ──────────────────────────────────────────────────── def _sltrans_find_groups(root: Path) -> dict[tuple[str, str], list[Path]]: """Return {(language, ir_type): [sorted shard paths]}.""" groups: dict[tuple[str, str], list[Path]] = {} for d in sorted(root.iterdir()): if not d.is_dir() or d.name in SLTRANS_SKIP_DIRS: continue for f in sorted(d.glob("*.parquet")): m = re.match(r"^(Perf_Optimized|Size_Optimized)", f.name) if m: groups.setdefault((d.name, m.group(1)), []).append(f) return groups def _pq_nrows(files: list[Path]) -> int: return sum(pq.ParquetFile(f).metadata.num_rows for f in files) def _est_tok_df(src: pd.Series, ir: pd.Series) -> pd.Series: src_w = src.fillna("").str.split().str.len().fillna(0) ir_w = ir.fillna("").str.split().str.len().fillna(0) return ((src_w + ir_w + 5) * 1.5).astype(int) def _probe_avg_tokens(files: list[Path], n: int, rng: random.Random) -> float: frames = [] seed = rng.randint(0, 2**31) for f in files: df = pq.ParquetFile(f).read_row_group(0).to_pandas() if not df.empty: frames.append(df.sample(min(n, len(df)), random_state=seed)) if sum(len(x) for x in frames) >= n: break if not frames: return 0.0 p = pd.concat(frames, ignore_index=True).head(n) p = p.dropna(subset=["Source_Code", "IR_Original"]) p = p[(p["Source_Code"] != "") & (p["IR_Original"] != "")] return float(_est_tok_df(p["Source_Code"], p["IR_Original"]).mean()) if len(p) else 0.0 def _sltrans_allocate( groups: dict[tuple[str, str], list[Path]], total: int, rng: random.Random, ) -> dict[tuple[str, str], int]: """Equal-share budget with deficit redistribution for small groups.""" keys = sorted(groups) avail: dict[tuple[str, str], int] = {} for k in tqdm(keys, desc=" probe", unit="grp", leave=False): rows = _pq_nrows(groups[k]) avg = _probe_avg_tokens(groups[k], SLTRANS_PROBE_ROWS, rng) avail[k] = int(rows * avg) tqdm.write( f" {k[0]:>15}/{k[1]:<16} ~{avail[k]:>14,} tok" f" ({rows:,} rows, avg {avg:.0f})" ) budgets = {k: total // len(keys) for k in keys} for _ in range(len(keys)): capped = {k: min(budgets[k], avail[k]) for k in keys} deficit = sum(budgets[k] - capped[k] for k in keys) if not deficit: break room = [k for k in keys if capped[k] < avail[k]] if not room: break bonus = deficit // len(room) for k in room: capped[k] = min(capped[k] + bonus, avail[k]) budgets = capped return budgets def write_sltrans( root: Path, budget: int, writer: ShardWriter, rng: random.Random, min_tokens: int, ) -> int: groups = _sltrans_find_groups(root) if not groups: print(f" WARNING: no SLTrans parquet files found in {root}", file=sys.stderr) return 0 budgets = _sltrans_allocate(groups, budget, rng) total_written = 0 bar = tqdm(total=budget, unit="tok", unit_scale=True, desc=" write", dynamic_ncols=True) for (lang, ir_type) in sorted(groups): g_budget = budgets[(lang, ir_type)] g_written = 0 files = list(groups[(lang, ir_type)]) rng.shuffle(files) for f in files: if g_written >= g_budget: break pf = pq.ParquetFile(f) for gi in range(pf.num_row_groups): if g_written >= g_budget: break df = pf.read_row_group(gi).to_pandas() df = df.dropna(subset=["Source_Code", "IR_Original"]) df = df[(df["Source_Code"] != "") & (df["IR_Original"] != "")] if df.empty: continue df = df.sample(frac=1, random_state=rng.randint(0, 2**31)).reset_index(drop=True) df["_t"] = _est_tok_df(df["Source_Code"], df["IR_Original"]) remaining = g_budget - g_written cutoff = max(int((df["_t"].cumsum() <= remaining).sum()), 1) for row in df.iloc[:cutoff].to_dict("records"): toks = int(row["_t"]) if toks < min_tokens: continue text = ( f"\n{row['Source_Code']}\n\n" f"\n{row['IR_Original']}\n" ) writer.write({ "text": text, "source": "sltrans", "meta": {"language": lang, "ir_type": ir_type}, "est_tokens": toks, }) g_written += toks total_written += toks bar.update(min(toks, budget - bar.n)) bar.close() return total_written # ── HuggingFace streaming ────────────────────────────────────────────────────── def _hf_open( hf_path: str, split: str = "train", hf_config: str | None = None, data_dir: str | None = None, ): """Open one HF streaming dataset with exponential-backoff retry.""" from datasets import load_dataset kw: dict = {"split": split, "streaming": True, "trust_remote_code": True} if hf_config: kw["name"] = hf_config if data_dir: kw["data_dir"] = data_dir for attempt in range(5): try: return load_dataset(hf_path, **kw) except ValueError as e: if "Bad split" in str(e): return None raise except Exception as e: if attempt < 4 and any(k in str(e).lower() for k in _TRANSIENT_ERRORS): time.sleep(2 ** attempt) continue raise return None def _hf_iter( hf_path: str, split: str = "train", hf_config: str | None = None, ): """Yield rows from a HuggingFace streaming dataset.""" ds = _hf_open(hf_path, split=split, hf_config=hf_config) if ds is not None: yield from ds def write_hf_source( source_name: str, budget: int, writer: ShardWriter, rng: random.Random, min_tokens: int, hf_path: str, text_fn, meta_fn, hf_config: str | None = None, split: str = "train", lang_filter: set[str] | None = None, ) -> int: written = skipped = 0 bar = tqdm(total=budget, unit="tok", unit_scale=True, desc=f" {source_name:<12}", dynamic_ncols=True, smoothing=0.05) try: for row in _hf_iter(hf_path, split=split, hf_config=hf_config): if lang_filter is not None: lang = (row.get("lang") or row.get("language") or "").lower() if lang not in lang_filter: skipped += 1 continue text = text_fn(row) if not text: skipped += 1 continue toks = estimate_tokens(text) if toks < min_tokens: skipped += 1 continue writer.write({ "text": text, "source": source_name, "meta": meta_fn(row), "est_tokens": toks, }) written += toks bar.update(min(toks, budget - bar.n)) if written >= budget: break finally: bar.close() print(f" done: {written:,} tokens written, {skipped:,} rows skipped") return written # ── text / meta extractors ───────────────────────────────────────────────────── def _get(row: dict, *keys: str, default: str = "") -> str: for k in keys: v = row.get(k) if v: return str(v) return default def pes2o_text(row): return _get(row, "text", "content") def pes2o_meta(row): return {"id": _get(row, "id", "doc_id"), "source": _get(row, "source", "venue")} def stack_text(row): return _get(row, "content", "text", "code") def stack_meta(row): return { "lang": _get(row, "lang", "language"), "repo": _get(row, "max_stars_repo_name", "repo_name"), "license": _get(row, "license"), } def owm_text(row): return _get(row, "text") def owm_meta(row): return {"url": _get(row, "url")} # ── main ─────────────────────────────────────────────────────────────────────── def main() -> None: ap = argparse.ArgumentParser( description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter, ) ap.add_argument("--sltrans-root", default=".", help="Root dir of downloaded SLTrans parquet files (default: .)") ap.add_argument("--sltrans-tokens", type=float, default=700_000_000, help="Token cap for SLTrans (default: 700M, 0=skip)") ap.add_argument("--pes2o-tokens", type=float, default=150_000_000, help="Token cap for peS2o (default: 150M, 0=skip)") ap.add_argument("--stack-tokens", type=float, default=100_000_000, help="Token cap for TheStack source code (default: 100M, 0=skip)") ap.add_argument("--stack-llvm-tokens", type=float, default=0, help="Token cap for TheStack unpaired LLVM IR (default: 0=skip)") ap.add_argument("--owm-tokens", type=float, default=50_000_000, help="Token cap for OpenWebMath (default: 50M, 0=skip)") ap.add_argument("--stack-langs", default=",".join(THE_STACK_LANGS), help="Comma-separated TheStack source-code language subsets (never includes llvm)") ap.add_argument("--output-dir", default="./mixed_pretrain", help="Output directory for JSONL shards (default: ./mixed_pretrain)") ap.add_argument("--shard-size", type=int, default=50_000, help="Records per JSONL shard (default: 50000)") ap.add_argument("--min-tokens", type=int, default=32, help="Drop records shorter than this (est. tokens, default: 32)") ap.add_argument("--seed", type=int, default=42) args = ap.parse_args() rng = random.Random(args.seed) out_dir = Path(args.output_dir) # Ensure "llvm" never leaks into the source-code filter. stack_langs = [s.strip() for s in args.stack_langs.split(",") if s.strip() and s.strip().lower() != "llvm"] budgets = { "sltrans": int(args.sltrans_tokens), "pes2o": int(args.pes2o_tokens), "the_stack": int(args.stack_tokens), "stack_llvm": int(args.stack_llvm_tokens), "openwebmath": int(args.owm_tokens), } active_sources = [name for name, tok in budgets.items() if tok > 0] total_budget = sum(budgets.values()) print("=" * 64) print("Mixed pre-training dataset builder") print(f" Output : {out_dir.resolve()}") print(f" Seed : {args.seed}") print() for name, toks in budgets.items(): if toks > 0: print(f" {name:<14} {toks:>15,} tokens") else: print(f" {name:<14} (skipped)") print(f" {'TOTAL':<14} {total_budget:>15,} tokens") print("=" * 64) summary: dict[str, int] = {} n_active = len(active_sources) step = 1 # ── SLTrans ──────────────────────────────────────────────────────────────── if budgets["sltrans"] > 0: print(f"\n[{step}/{n_active}] SLTrans (local parquet, balanced language x IR-type)") step += 1 w = ShardWriter(out_dir, "sltrans", args.shard_size) try: summary["sltrans"] = write_sltrans( Path(args.sltrans_root), budgets["sltrans"], w, rng, args.min_tokens, ) finally: w.close() # ── peS2o ────────────────────────────────────────────────────────────────── if budgets["pes2o"] > 0: print(f"\n[{step}/{n_active}] peS2o (allenai/peS2o, config=v2)") step += 1 w = ShardWriter(out_dir, "pes2o", args.shard_size) try: summary["pes2o"] = write_hf_source( "pes2o", budgets["pes2o"], w, rng, args.min_tokens, hf_path="allenai/peS2o", text_fn=pes2o_text, meta_fn=pes2o_meta, hf_config="v2", ) finally: w.close() # ── TheStack ─────────────────────────────────────────────────────────────── if budgets["the_stack"] > 0: print(f"\n[{step}/{n_active}] TheStack (bigcode/the-stack, {len(stack_langs)} language subsets)") print(f" langs: {', '.join(stack_langs)}") step += 1 w = ShardWriter(out_dir, "the_stack", args.shard_size) try: summary["the_stack"] = write_hf_source( "the_stack", budgets["the_stack"], w, rng, args.min_tokens, hf_path="bigcode/the-stack", text_fn=stack_text, meta_fn=stack_meta, lang_filter={l.lower() for l in stack_langs}, ) finally: w.close() # ── TheStack LLVM IR (unpaired) ──────────────────────────────────────────── if budgets["stack_llvm"] > 0: print(f"\n[{step}/{n_active}] TheStack LLVM IR (bigcode/the-stack, lang=llvm, unpaired)") step += 1 w = ShardWriter(out_dir, "stack_llvm", args.shard_size) try: summary["stack_llvm"] = write_hf_source( "stack_llvm", budgets["stack_llvm"], w, rng, args.min_tokens, hf_path="bigcode/the-stack", text_fn=stack_text, meta_fn=stack_meta, lang_filter={"llvm"}, ) finally: w.close() # ── OpenWebMath ──────────────────────────────────────────────────────────── if budgets["openwebmath"] > 0: print(f"\n[{step}/{n_active}] OpenWebMath (open-web-math/open-web-math)") w = ShardWriter(out_dir, "openwebmath", args.shard_size) try: summary["openwebmath"] = write_hf_source( "openwebmath", budgets["openwebmath"], w, rng, args.min_tokens, hf_path="open-web-math/open-web-math", text_fn=owm_text, meta_fn=owm_meta, ) finally: w.close() # ── manifest ─────────────────────────────────────────────────────────────── manifest = { "seed": args.seed, "min_tokens_per_record": args.min_tokens, "sources": { "sltrans": {"root": args.sltrans_root, "target_tokens": budgets["sltrans"]}, "pes2o": {"hf_path": "allenai/peS2o", "target_tokens": budgets["pes2o"]}, "the_stack": {"hf_path": "bigcode/the-stack", "target_tokens": budgets["the_stack"], "langs": stack_langs}, "stack_llvm": {"hf_path": "bigcode/the-stack", "target_tokens": budgets["stack_llvm"], "langs": ["llvm"]}, "openwebmath": {"hf_path": "open-web-math/open-web-math", "target_tokens": budgets["openwebmath"]}, }, "tokens_written": summary, } (out_dir / "manifest.json").write_text(json.dumps(manifest, indent=2)) # ── summary ──────────────────────────────────────────────────────────────── grand = sum(summary.values()) print("\n" + "=" * 62) print(f"{'Source':<14} {'Target':>15} {'Written':>15} {'Share':>6}") print("-" * 58) for name in ["sltrans", "pes2o", "the_stack", "stack_llvm", "openwebmath"]: if budgets[name] == 0: continue written = summary.get(name, 0) pct = 100 * written / grand if grand else 0 print(f"{name:<14} {budgets[name]:>15,} {written:>15,} {pct:>5.1f}%") print("-" * 58) print(f"{'TOTAL':<14} {total_budget:>15,} {grand:>15,} 100.0%") print(f"\nOutput: {out_dir.resolve()}") if __name__ == "__main__": main()