| |
| import os |
| import pandas as pd |
| import numpy as np |
| import torch |
| from torch.utils.data import Dataset, DataLoader |
| from PIL import Image |
| from sklearn.model_selection import train_test_split |
| import torchvision.transforms as transforms |
|
|
| class XRayDataset(Dataset): |
| def __init__(self, dataframe, image_dir, transform=None): |
| self.dataframe = dataframe |
| self.image_dir = image_dir |
| self.transform = transform |
| self.classes = [ |
| 'pneumonia', |
| 'atelectasis', |
| 'pleural effusion', |
| 'consolidation', |
| 'cardiomegaly', |
| 'edema', |
| 'emphysema', |
| 'tuberculosis' |
| ] |
|
|
| def __len__(self): |
| return len(self.dataframe) |
|
|
| def __getitem__(self, idx): |
| img_name = self.dataframe.iloc[idx]['image_name'] + '.png' |
| img_path = os.path.join(self.image_dir, img_name) |
| image = Image.open(img_path).convert('RGB') |
| labels = self.dataframe.iloc[idx][self.classes].values.astype(np.float32) |
|
|
| if self.transform: |
| image = self.transform(image) |
|
|
| return image, torch.tensor(labels) |
|
|
| |
| data_transforms = { |
| 'train': transforms.Compose([ |
| transforms.Resize((224, 224)), |
| transforms.RandomHorizontalFlip(), |
| transforms.RandomRotation(10), |
| transforms.ColorJitter(brightness=0.1, contrast=0.1, saturation=0.1), |
| transforms.ToTensor(), |
| transforms.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225]) |
| ]), |
| 'val': transforms.Compose([ |
| transforms.Resize((224, 224)), |
| transforms.ToTensor(), |
| transforms.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225]) |
| ]), |
| } |
|
|
|
|
| def prepare_loaders(batch_size=16, test_size=0.2): |
| df = pd.read_csv('data/xray_illness_classification.csv') |
| train_df, val_df = train_test_split(df, test_size=test_size, random_state=42) |
|
|
| train_dataset = XRayDataset(train_df, 'data/xray_images', data_transforms['train']) |
| val_dataset = XRayDataset(val_df, 'data/xray_images', data_transforms['val']) |
|
|
| dataloaders = { |
| 'train': DataLoader(train_dataset, batch_size=batch_size, shuffle=True), |
| 'val': DataLoader(val_dataset, batch_size=batch_size, shuffle=False) |
| } |
|
|
| return dataloaders |
|
|