"""Read Harbor ATIF trajectories (agent/trajectory.json) and recover the file edits an agent made. Supported edit shapes (anything else that looks like it modifies files marks the replay approximate): - structured write/edit tools: Write, Edit, MultiEdit, write_file, replace_in_file, str_replace, create_file - apply_patch (V4A patch text), as a tool or as `apply_patch <<'EOF'` inside a shell command - shell heredocs: `cat > path <<'EOF' ... EOF` and `cat <<'EOF' > path` Paths are resolved against /workspace/monitoring (the task's working directory). """ from __future__ import annotations import json import re import shlex WS = "/workspace/monitoring" SHELL_TOOLS = {"bash", "shell", "exec_command", "bash_command", "run_terminal_cmd", "local_shell", "terminal", "run_shell_command", "execute_command"} _HEREDOC = re.compile(r"cat\s+(?:>\s*(?P\S+)\s+<<-?\s*(?P['\"]?)(?P\w+)(?P=q1)" r"|<<-?\s*(?P['\"]?)(?P\w+)(?P=q2)\s*>\s*(?P\S+))[^\n]*\n") _PATCH_HEREDOC = re.compile(r"apply_patch\s+<<-?\s*(['\"]?)(\w+)\1[^\n]*\n") _MUTATING = re.compile(r"(?(?!\s*/dev/null)(?!&)|\bsed\s+-i|\btee\b|\bmv\s|\bcp\s|\brm\s|\bpython3?\s+-c" r"|\bperl\s+-[pi]|\bapply_patch\b|\btruncate\b|\bpatch\s") def rel_path(p: str | None) -> str | None: """Workspace-relative path, or None when the path is outside /workspace/monitoring.""" if not p: return None p = p.strip().strip("'\"") if p.startswith(WS + "/"): p = p[len(WS) + 1:] elif p.startswith("/"): return None p = re.sub(r"^\./", "", p) return None if ".." in p.split("/") else p def command_text(args: dict) -> str: c = args.get("command", args.get("cmd", args.get("keystrokes", args.get("input", "")))) if isinstance(c, list): c = c[-1] if len(c) >= 3 and c[0] in ("bash", "sh", "zsh") and c[1] in ("-lc", "-c") else shlex.join(c) return str(c or "") def shell_ops(cmd: str) -> tuple[list[tuple], bool]: """Edits recoverable from a shell command, plus whether an unrecovered write may remain.""" ops, rest, pos = [], [], 0 while True: m_h, m_p = _HEREDOC.search(cmd, pos), _PATCH_HEREDOC.search(cmd, pos) m = min((x for x in (m_h, m_p) if x), key=lambda x: x.start(), default=None) if m is None: rest.append(cmd[pos:]) break tag = m.group(2) if m is m_p else (m.group("t1") or m.group("t2")) end = re.compile(rf"^\s*{re.escape(tag)}\s*$", re.M).search(cmd, m.end()) body = cmd[m.end():end.start() if end else len(cmd)] rest.append(cmd[pos:m.start()]) if m is m_p: ops.append(("patch", body)) else: path = rel_path(m.group("p1") or m.group("p2")) if path: ops.append(("write", path, body)) pos = end.end() if end else len(cmd) leftover = "".join(rest) return ops, bool(_MUTATING.search(leftover)) def call_ops(name: str, args: dict) -> tuple[list[tuple], bool]: """(edit ops, maybe_unreplayed) for one tool call.""" n = (name or "").lower() path = rel_path(args.get("file_path") or args.get("path") or args.get("filename")) if n in ("write", "write_file", "create_file", "create") and "content" in args: return ([("write", path, str(args["content"]))] if path else []), False if n in ("edit", "str_replace", "replace_in_file", "str_replace_editor", "edit_file"): old = args.get("old_string", args.get("old", args.get("old_str"))) new = args.get("new_string", args.get("new", args.get("new_str"))) if path and old is not None and new is not None: return [("replace", path, str(old), str(new), bool(args.get("replace_all")))], False return [], bool(path) if n == "multiedit": return ([("replace", path, str(e.get("old_string", "")), str(e.get("new_string", "")), bool(e.get("replace_all"))) for e in args.get("edits") or []] if path else []), False if n == "apply_patch": return [("patch", str(args.get("input") or args.get("patch") or command_text(args)))], False if n == "exec" and "tools." in str(args.get("input", "")): return codex_exec_ops(str(args["input"])) if n in SHELL_TOOLS: return shell_ops(command_text(args)) return [], False _JS_STR = r'"(?:[^"\\]|\\.)*"' _JS_PATCH = re.compile(r"tools\.apply_patch\(\s*(" + _JS_STR + ")") _JS_CMD = re.compile(r"\bcmd\s*:\s*(" + _JS_STR + ")") def codex_exec_ops(src: str) -> tuple[list[tuple], bool]: """Codex code-mode: one `exec` call holds JS that calls tools.apply_patch("...") / tools.exec_command({cmd:"..."}).""" events = [] for m in _JS_PATCH.finditer(src): events.append((m.start(), [("patch", json.loads(m.group(1)))], False)) for m in _JS_CMD.finditer(src): ops, maybe = shell_ops(json.loads(m.group(1))) events.append((m.start(), ops, maybe)) ops, maybe = [], False for _, o, mb in sorted(events, key=lambda e: e[0]): ops += o maybe = maybe or mb # commands built dynamically (e.g. a JS array passed to exec_command) cannot be replayed exactly if "exec_command" in src and not _JS_CMD.search(src): maybe = maybe or bool(_MUTATING.search(src)) return ops, maybe def apply_v4a(files: dict, patch: str) -> tuple[list[tuple], bool]: """Turn a V4A patch into write/delete ops against `files` ({rel: text}); returns (ops, ok).""" ops, ok = [], True lines = patch.splitlines() i = 0 while i < len(lines): ln = lines[i] if ln.startswith("*** Add File: "): path, body = rel_path(ln[14:]), [] i += 1 while i < len(lines) and not lines[i].startswith("*** "): body.append(lines[i][1:] if lines[i].startswith("+") else lines[i]) i += 1 if path: ops.append(("write", path, "\n".join(body) + "\n")) continue if ln.startswith("*** Delete File: "): path = rel_path(ln[17:]) if path: ops.append(("delete", path)) i += 1 continue if ln.startswith("*** Update File: "): path, target = rel_path(ln[17:]), None i += 1 if i < len(lines) and lines[i].startswith("*** Move to: "): target = rel_path(lines[i][13:]) i += 1 hunks, cur = [], [] while i < len(lines) and not (lines[i].startswith("*** ") and lines[i] != "*** End of File"): if lines[i].startswith("@@"): if cur: hunks.append(cur) cur = [] elif lines[i] != "*** End of File": cur.append(lines[i]) i += 1 if cur: hunks.append(cur) text = files.get(path) if path else None if text is None: ok = False continue cursor = 0 for h in hunks: old = "\n".join(x[1:] for x in h if x[:1] in (" ", "-") or x == "") new = "\n".join(x[1:] for x in h if x[:1] in (" ", "+") or x == "") at = text.find(old, cursor) if old else len(text) if at < 0: ok = False continue text = text[:at] + new + text[at + len(old):] cursor = at + len(new) if target and target != path: ops.append(("delete", path)) ops.append(("write", target or path, text)) continue i += 1 return ops, ok def load_trajectory(path: str) -> dict: with open(path) as fh: return json.loads(renamed(fh.read())) # ---------------------------------------------------------------------------- renamed host names _RENAME: tuple | None = None # (regex, mapping), set by load_renames _COPIES: list[str] = [] def load_renames(path: str | None) -> int: """`--rename-map FILE` ({"map": {old: new}}): host names a release renamed in the tasks (the fictional company domains moved to reserved `.example` names in 0.2.0). Stored trajectories, traces and workspaces are read through it, so that they replay and grade against the renamed tasks. Returns the number of names.""" global _RENAME if not path: _RENAME = None return 0 with open(path) as fh: m = json.load(fh)["map"] keys = sorted(m, key=lambda k: (-len(k), k)) _RENAME = (re.compile(r"(? str: if _RENAME is None: return text rx, m = _RENAME return rx.sub(lambda mo: m[mo.group(0)], text) def renamed_tree(root: str) -> str: """`root` itself without a rename map; otherwise a scratch copy (removed at exit) with every UTF-8 file and file name read through the map.""" if _RENAME is None: return root import atexit import os import shutil import tempfile if not _COPIES: atexit.register(lambda: [shutil.rmtree(d, ignore_errors=True) for d in _COPIES]) dst = tempfile.mkdtemp(prefix="af-renamed-") _COPIES.append(dst) out = os.path.join(dst, os.path.basename(root.rstrip("/"))) for dp, dns, fns in os.walk(root): dns[:] = [d for d in dns if d != "__pycache__"] for fn in fns: src = os.path.join(dp, fn) if os.path.islink(src): continue rel = renamed(os.path.relpath(src, root)) p = os.path.join(out, rel) os.makedirs(os.path.dirname(p), exist_ok=True) with open(src, "rb") as fh: data = fh.read() try: data = renamed(data.decode("utf-8")).encode("utf-8") except UnicodeDecodeError: pass with open(p, "wb") as fh: fh.write(data) shutil.copymode(src, p) return out def text_of(content) -> str: if content is None: return "" if isinstance(content, str): return content if isinstance(content, list): return "\n".join(str(p.get("text", "")) for p in content if isinstance(p, dict) and p.get("type") == "text") return str(content) def iter_events(traj: dict): """Yield ('think', text) | ('call', id, name, args) | ('obs', id, text) in trajectory order. The first user message (the task instruction) and system messages are skipped. """ seen_user = False for st in traj.get("steps") or []: src = st.get("source") if src == "system": continue if src == "user": if seen_user: yield ("think", "[user] " + text_of(st.get("message"))) seen_user = True continue thought = "\n\n".join(x for x in (st.get("reasoning_content") or "", text_of(st.get("message"))) if x.strip()) if thought.strip(): yield ("think", thought) calls = st.get("tool_calls") or [] for c in calls: yield ("call", c.get("tool_call_id"), c.get("function_name", ""), c.get("arguments") or {}) results = ((st.get("observation") or {}).get("results")) or [] for k, r in enumerate(results): cid = r.get("source_call_id") or (calls[k].get("tool_call_id") if k < len(calls) else None) yield ("obs", cid, text_of(r.get("content")))