Add files using upload-large-folder tool
Browse files
README.md
CHANGED
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@@ -3,9 +3,8 @@ pretty_name: Observed Antibody Dataset
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| 3 |
license: cc-by-4.0
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| 4 |
configs:
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- config_name: default
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| 6 |
-
configs:
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-
- config_name: paired
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| 8 |
features:
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| 9 |
- name: meta_Run
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dtype: string
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| 11 |
- name: meta_Link
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@@ -71,17 +70,17 @@ configs:
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- name: germline_alignment_aa_heavy
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dtype: string
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- name: v_alignment_start_heavy
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-
dtype:
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- name: v_alignment_end_heavy
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-
dtype:
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| 77 |
- name: d_alignment_start_heavy
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| 78 |
-
dtype:
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| 79 |
- name: d_alignment_end_heavy
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| 80 |
-
dtype:
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| 81 |
- name: j_alignment_start_heavy
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| 82 |
-
dtype:
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| 83 |
- name: j_alignment_end_heavy
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-
dtype:
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- name: v_sequence_alignment_heavy
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dtype: string
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- name: v_sequence_alignment_aa_heavy
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@@ -137,17 +136,17 @@ configs:
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- name: junction_heavy
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dtype: string
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- name: junction_length_heavy
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-
dtype:
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- name: junction_aa_heavy
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dtype: string
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| 143 |
- name: junction_aa_length_heavy
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-
dtype:
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| 145 |
- name: v_score_heavy
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| 146 |
-
dtype:
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| 147 |
- name: d_score_heavy
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| 148 |
-
dtype:
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| 149 |
- name: j_score_heavy
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| 150 |
-
dtype:
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| 151 |
- name: v_cigar_heavy
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| 152 |
dtype: string
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| 153 |
- name: d_cigar_heavy
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@@ -155,23 +154,291 @@ configs:
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- name: j_cigar_heavy
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dtype: string
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| 157 |
- name: v_support_heavy
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| 158 |
-
dtype:
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| 159 |
- name: d_support_heavy
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| 160 |
-
dtype:
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| 161 |
- name: j_support_heavy
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| 162 |
-
dtype:
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| 163 |
- name: v_identity_heavy
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| 164 |
-
dtype:
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| 165 |
- name: d_identity_heavy
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| 166 |
-
dtype:
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| 167 |
- name: j_identity_heavy
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| 168 |
-
dtype:
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| 169 |
- name: v_sequence_start_heavy
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| 170 |
data_files: paired/*.csv
|
| 171 |
-
- config_name: paired
|
| 172 |
-
configs:
|
| 173 |
- config_name: paired
|
| 174 |
features:
|
|
|
|
| 175 |
- name: meta_Run
|
| 176 |
dtype: string
|
| 177 |
- name: meta_Link
|
|
@@ -237,17 +504,17 @@ configs:
|
|
| 237 |
- name: germline_alignment_aa_heavy
|
| 238 |
dtype: string
|
| 239 |
- name: v_alignment_start_heavy
|
| 240 |
-
dtype:
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| 241 |
- name: v_alignment_end_heavy
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| 242 |
-
dtype:
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| 243 |
- name: d_alignment_start_heavy
|
| 244 |
-
dtype:
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| 245 |
- name: d_alignment_end_heavy
|
| 246 |
-
dtype:
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| 247 |
- name: j_alignment_start_heavy
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| 248 |
-
dtype:
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| 249 |
- name: j_alignment_end_heavy
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| 250 |
-
dtype:
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| 251 |
- name: v_sequence_alignment_heavy
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| 252 |
dtype: string
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| 253 |
- name: v_sequence_alignment_aa_heavy
|
|
@@ -303,17 +570,17 @@ configs:
|
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| 303 |
- name: junction_heavy
|
| 304 |
dtype: string
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| 305 |
- name: junction_length_heavy
|
| 306 |
-
dtype:
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| 307 |
- name: junction_aa_heavy
|
| 308 |
dtype: string
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| 309 |
- name: junction_aa_length_heavy
|
| 310 |
-
dtype:
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| 311 |
- name: v_score_heavy
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| 312 |
-
dtype:
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| 313 |
- name: d_score_heavy
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| 314 |
-
dtype:
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| 315 |
- name: j_score_heavy
|
| 316 |
-
dtype:
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| 317 |
- name: v_cigar_heavy
|
| 318 |
dtype: string
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| 319 |
- name: d_cigar_heavy
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|
@@ -321,18 +588,287 @@ configs:
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| 321 |
- name: j_cigar_heavy
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| 322 |
dtype: string
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| 323 |
- name: v_support_heavy
|
| 324 |
-
dtype:
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| 325 |
- name: d_support_heavy
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| 326 |
-
dtype:
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| 327 |
- name: j_support_heavy
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| 328 |
-
dtype:
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| 329 |
- name: v_identity_heavy
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| 330 |
-
dtype:
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| 331 |
- name: d_identity_heavy
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| 332 |
-
dtype:
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| 333 |
- name: j_identity_heavy
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| 334 |
-
dtype:
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| 335 |
- name: v_sequence_start_heavy
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| 336 |
data_files: paired/*.csv
|
| 337 |
---
|
| 338 |
|
|
|
|
| 3 |
license: cc-by-4.0
|
| 4 |
configs:
|
| 5 |
- config_name: default
|
|
|
|
|
|
|
| 6 |
features:
|
| 7 |
+
# Metadata fields
|
| 8 |
- name: meta_Run
|
| 9 |
dtype: string
|
| 10 |
- name: meta_Link
|
|
|
|
| 70 |
- name: germline_alignment_aa_heavy
|
| 71 |
dtype: string
|
| 72 |
- name: v_alignment_start_heavy
|
| 73 |
+
dtype: string
|
| 74 |
- name: v_alignment_end_heavy
|
| 75 |
+
dtype: string
|
| 76 |
- name: d_alignment_start_heavy
|
| 77 |
+
dtype: string
|
| 78 |
- name: d_alignment_end_heavy
|
| 79 |
+
dtype: string
|
| 80 |
- name: j_alignment_start_heavy
|
| 81 |
+
dtype: string
|
| 82 |
- name: j_alignment_end_heavy
|
| 83 |
+
dtype: string
|
| 84 |
- name: v_sequence_alignment_heavy
|
| 85 |
dtype: string
|
| 86 |
- name: v_sequence_alignment_aa_heavy
|
|
|
|
| 136 |
- name: junction_heavy
|
| 137 |
dtype: string
|
| 138 |
- name: junction_length_heavy
|
| 139 |
+
dtype: string
|
| 140 |
- name: junction_aa_heavy
|
| 141 |
dtype: string
|
| 142 |
- name: junction_aa_length_heavy
|
| 143 |
+
dtype: string
|
| 144 |
- name: v_score_heavy
|
| 145 |
+
dtype: string
|
| 146 |
- name: d_score_heavy
|
| 147 |
+
dtype: string
|
| 148 |
- name: j_score_heavy
|
| 149 |
+
dtype: string
|
| 150 |
- name: v_cigar_heavy
|
| 151 |
dtype: string
|
| 152 |
- name: d_cigar_heavy
|
|
|
|
| 154 |
- name: j_cigar_heavy
|
| 155 |
dtype: string
|
| 156 |
- name: v_support_heavy
|
| 157 |
+
dtype: string
|
| 158 |
- name: d_support_heavy
|
| 159 |
+
dtype: string
|
| 160 |
- name: j_support_heavy
|
| 161 |
+
dtype: string
|
| 162 |
- name: v_identity_heavy
|
| 163 |
+
dtype: string
|
| 164 |
- name: d_identity_heavy
|
| 165 |
+
dtype: string
|
| 166 |
- name: j_identity_heavy
|
| 167 |
+
dtype: string
|
| 168 |
- name: v_sequence_start_heavy
|
| 169 |
+
dtype: string
|
| 170 |
+
- name: v_sequence_end_heavy
|
| 171 |
+
dtype: string
|
| 172 |
+
- name: v_germline_start_heavy
|
| 173 |
+
dtype: string
|
| 174 |
+
- name: v_germline_end_heavy
|
| 175 |
+
dtype: string
|
| 176 |
+
- name: d_sequence_start_heavy
|
| 177 |
+
dtype: string
|
| 178 |
+
- name: d_sequence_end_heavy
|
| 179 |
+
dtype: string
|
| 180 |
+
- name: d_germline_start_heavy
|
| 181 |
+
dtype: string
|
| 182 |
+
- name: d_germline_end_heavy
|
| 183 |
+
dtype: string
|
| 184 |
+
- name: j_sequence_start_heavy
|
| 185 |
+
dtype: string
|
| 186 |
+
- name: j_sequence_end_heavy
|
| 187 |
+
dtype: string
|
| 188 |
+
- name: j_germline_start_heavy
|
| 189 |
+
dtype: string
|
| 190 |
+
- name: j_germline_end_heavy
|
| 191 |
+
dtype: string
|
| 192 |
+
- name: fwr1_start_heavy
|
| 193 |
+
dtype: string
|
| 194 |
+
- name: fwr1_end_heavy
|
| 195 |
+
dtype: string
|
| 196 |
+
- name: cdr1_start_heavy
|
| 197 |
+
dtype: string
|
| 198 |
+
- name: cdr1_end_heavy
|
| 199 |
+
dtype: string
|
| 200 |
+
- name: fwr2_start_heavy
|
| 201 |
+
dtype: string
|
| 202 |
+
- name: fwr2_end_heavy
|
| 203 |
+
dtype: string
|
| 204 |
+
- name: cdr2_start_heavy
|
| 205 |
+
dtype: string
|
| 206 |
+
- name: cdr2_end_heavy
|
| 207 |
+
dtype: string
|
| 208 |
+
- name: fwr3_start_heavy
|
| 209 |
+
dtype: string
|
| 210 |
+
- name: fwr3_end_heavy
|
| 211 |
+
dtype: string
|
| 212 |
+
- name: fwr4_start_heavy
|
| 213 |
+
dtype: string
|
| 214 |
+
- name: fwr4_end_heavy
|
| 215 |
+
dtype: string
|
| 216 |
+
- name: cdr3_start_heavy
|
| 217 |
+
dtype: string
|
| 218 |
+
- name: cdr3_end_heavy
|
| 219 |
+
dtype: string
|
| 220 |
+
- name: np1_heavy
|
| 221 |
+
dtype: string
|
| 222 |
+
- name: np1_length_heavy
|
| 223 |
+
dtype: string
|
| 224 |
+
- name: np2_heavy
|
| 225 |
+
dtype: string
|
| 226 |
+
- name: np2_length_heavy
|
| 227 |
+
dtype: string
|
| 228 |
+
- name: c_region_heavy
|
| 229 |
+
dtype: string
|
| 230 |
+
- name: Isotype_heavy
|
| 231 |
+
dtype: string
|
| 232 |
+
- name: Redundancy_heavy
|
| 233 |
+
dtype: string
|
| 234 |
+
- name: ANARCI_numbering_heavy
|
| 235 |
+
dtype: string
|
| 236 |
+
- name: ANARCI_status_heavy
|
| 237 |
+
dtype: string
|
| 238 |
+
|
| 239 |
+
# Light chain fields
|
| 240 |
+
- name: sequence_id_light
|
| 241 |
+
dtype: string
|
| 242 |
+
- name: sequence_light
|
| 243 |
+
dtype: string
|
| 244 |
+
- name: locus_light
|
| 245 |
+
dtype: string
|
| 246 |
+
- name: stop_codon_light
|
| 247 |
+
dtype: string
|
| 248 |
+
- name: vj_in_frame_light
|
| 249 |
+
dtype: string
|
| 250 |
+
- name: v_frameshift_light
|
| 251 |
+
dtype: string
|
| 252 |
+
- name: productive_light
|
| 253 |
+
dtype: string
|
| 254 |
+
- name: rev_comp_light
|
| 255 |
+
dtype: string
|
| 256 |
+
- name: complete_vdj_light
|
| 257 |
+
dtype: string
|
| 258 |
+
- name: v_call_light
|
| 259 |
+
dtype: string
|
| 260 |
+
- name: d_call_light
|
| 261 |
+
dtype: string
|
| 262 |
+
- name: j_call_light
|
| 263 |
+
dtype: string
|
| 264 |
+
- name: sequence_alignment_light
|
| 265 |
+
dtype: string
|
| 266 |
+
- name: germline_alignment_light
|
| 267 |
+
dtype: string
|
| 268 |
+
- name: sequence_alignment_aa_light
|
| 269 |
+
dtype: string
|
| 270 |
+
- name: germline_alignment_aa_light
|
| 271 |
+
dtype: string
|
| 272 |
+
- name: v_alignment_start_light
|
| 273 |
+
dtype: string
|
| 274 |
+
- name: v_alignment_end_light
|
| 275 |
+
dtype: string
|
| 276 |
+
- name: d_alignment_start_light
|
| 277 |
+
dtype: string
|
| 278 |
+
- name: d_alignment_end_light
|
| 279 |
+
dtype: string
|
| 280 |
+
- name: j_alignment_start_light
|
| 281 |
+
dtype: string
|
| 282 |
+
- name: j_alignment_end_light
|
| 283 |
+
dtype: string
|
| 284 |
+
- name: v_sequence_alignment_light
|
| 285 |
+
dtype: string
|
| 286 |
+
- name: v_sequence_alignment_aa_light
|
| 287 |
+
dtype: string
|
| 288 |
+
- name: v_germline_alignment_light
|
| 289 |
+
dtype: string
|
| 290 |
+
- name: v_germline_alignment_aa_light
|
| 291 |
+
dtype: string
|
| 292 |
+
- name: d_sequence_alignment_light
|
| 293 |
+
dtype: string
|
| 294 |
+
- name: d_sequence_alignment_aa_light
|
| 295 |
+
dtype: string
|
| 296 |
+
- name: d_germline_alignment_light
|
| 297 |
+
dtype: string
|
| 298 |
+
- name: d_germline_alignment_aa_light
|
| 299 |
+
dtype: string
|
| 300 |
+
- name: j_sequence_alignment_light
|
| 301 |
+
dtype: string
|
| 302 |
+
- name: j_sequence_alignment_aa_light
|
| 303 |
+
dtype: string
|
| 304 |
+
- name: j_germline_alignment_light
|
| 305 |
+
dtype: string
|
| 306 |
+
- name: j_germline_alignment_aa_light
|
| 307 |
+
dtype: string
|
| 308 |
+
- name: fwr1_light
|
| 309 |
+
dtype: string
|
| 310 |
+
- name: fwr1_aa_light
|
| 311 |
+
dtype: string
|
| 312 |
+
- name: cdr1_light
|
| 313 |
+
dtype: string
|
| 314 |
+
- name: cdr1_aa_light
|
| 315 |
+
dtype: string
|
| 316 |
+
- name: fwr2_light
|
| 317 |
+
dtype: string
|
| 318 |
+
- name: fwr2_aa_light
|
| 319 |
+
dtype: string
|
| 320 |
+
- name: cdr2_light
|
| 321 |
+
dtype: string
|
| 322 |
+
- name: cdr2_aa_light
|
| 323 |
+
dtype: string
|
| 324 |
+
- name: fwr3_light
|
| 325 |
+
dtype: string
|
| 326 |
+
- name: fwr3_aa_light
|
| 327 |
+
dtype: string
|
| 328 |
+
- name: fwr4_light
|
| 329 |
+
dtype: string
|
| 330 |
+
- name: fwr4_aa_light
|
| 331 |
+
dtype: string
|
| 332 |
+
- name: cdr3_light
|
| 333 |
+
dtype: string
|
| 334 |
+
- name: cdr3_aa_light
|
| 335 |
+
dtype: string
|
| 336 |
+
- name: junction_light
|
| 337 |
+
dtype: string
|
| 338 |
+
- name: junction_length_light
|
| 339 |
+
dtype: string
|
| 340 |
+
- name: junction_aa_light
|
| 341 |
+
dtype: string
|
| 342 |
+
- name: junction_aa_length_light
|
| 343 |
+
dtype: string
|
| 344 |
+
- name: v_score_light
|
| 345 |
+
dtype: string
|
| 346 |
+
- name: d_score_light
|
| 347 |
+
dtype: string
|
| 348 |
+
- name: j_score_light
|
| 349 |
+
dtype: string
|
| 350 |
+
- name: v_cigar_light
|
| 351 |
+
dtype: string
|
| 352 |
+
- name: d_cigar_light
|
| 353 |
+
dtype: string
|
| 354 |
+
- name: j_cigar_light
|
| 355 |
+
dtype: string
|
| 356 |
+
- name: v_support_light
|
| 357 |
+
dtype: string
|
| 358 |
+
- name: d_support_light
|
| 359 |
+
dtype: string
|
| 360 |
+
- name: j_support_light
|
| 361 |
+
dtype: string
|
| 362 |
+
- name: v_identity_light
|
| 363 |
+
dtype: string
|
| 364 |
+
- name: d_identity_light
|
| 365 |
+
dtype: string
|
| 366 |
+
- name: j_identity_light
|
| 367 |
+
dtype: string
|
| 368 |
+
- name: v_sequence_start_light
|
| 369 |
+
dtype: string
|
| 370 |
+
- name: v_sequence_end_light
|
| 371 |
+
dtype: string
|
| 372 |
+
- name: v_germline_start_light
|
| 373 |
+
dtype: string
|
| 374 |
+
- name: v_germline_end_light
|
| 375 |
+
dtype: string
|
| 376 |
+
- name: d_sequence_start_light
|
| 377 |
+
dtype: string
|
| 378 |
+
- name: d_sequence_end_light
|
| 379 |
+
dtype: string
|
| 380 |
+
- name: d_germline_start_light
|
| 381 |
+
dtype: string
|
| 382 |
+
- name: d_germline_end_light
|
| 383 |
+
dtype: string
|
| 384 |
+
- name: j_sequence_start_light
|
| 385 |
+
dtype: string
|
| 386 |
+
- name: j_sequence_end_light
|
| 387 |
+
dtype: string
|
| 388 |
+
- name: j_germline_start_light
|
| 389 |
+
dtype: string
|
| 390 |
+
- name: j_germline_end_light
|
| 391 |
+
dtype: string
|
| 392 |
+
- name: fwr1_start_light
|
| 393 |
+
dtype: string
|
| 394 |
+
- name: fwr1_end_light
|
| 395 |
+
dtype: string
|
| 396 |
+
- name: cdr1_start_light
|
| 397 |
+
dtype: string
|
| 398 |
+
- name: cdr1_end_light
|
| 399 |
+
dtype: string
|
| 400 |
+
- name: fwr2_start_light
|
| 401 |
+
dtype: string
|
| 402 |
+
- name: fwr2_end_light
|
| 403 |
+
dtype: string
|
| 404 |
+
- name: cdr2_start_light
|
| 405 |
+
dtype: string
|
| 406 |
+
- name: cdr2_end_light
|
| 407 |
+
dtype: string
|
| 408 |
+
- name: fwr3_start_light
|
| 409 |
+
dtype: string
|
| 410 |
+
- name: fwr3_end_light
|
| 411 |
+
dtype: string
|
| 412 |
+
- name: fwr4_start_light
|
| 413 |
+
dtype: string
|
| 414 |
+
- name: fwr4_end_light
|
| 415 |
+
dtype: string
|
| 416 |
+
- name: cdr3_start_light
|
| 417 |
+
dtype: string
|
| 418 |
+
- name: cdr3_end_light
|
| 419 |
+
dtype: string
|
| 420 |
+
- name: np1_light
|
| 421 |
+
dtype: string
|
| 422 |
+
- name: np1_length_light
|
| 423 |
+
dtype: string
|
| 424 |
+
- name: np2_light
|
| 425 |
+
dtype: string
|
| 426 |
+
- name: np2_length_light
|
| 427 |
+
dtype: string
|
| 428 |
+
- name: c_region_light
|
| 429 |
+
dtype: string
|
| 430 |
+
- name: Isotype_light
|
| 431 |
+
dtype: string
|
| 432 |
+
- name: Redundancy_light
|
| 433 |
+
dtype: string
|
| 434 |
+
- name: ANARCI_numbering_light
|
| 435 |
+
dtype: string
|
| 436 |
+
- name: ANARCI_status_light
|
| 437 |
+
dtype: string
|
| 438 |
data_files: paired/*.csv
|
|
|
|
|
|
|
| 439 |
- config_name: paired
|
| 440 |
features:
|
| 441 |
+
# Metadata fields
|
| 442 |
- name: meta_Run
|
| 443 |
dtype: string
|
| 444 |
- name: meta_Link
|
|
|
|
| 504 |
- name: germline_alignment_aa_heavy
|
| 505 |
dtype: string
|
| 506 |
- name: v_alignment_start_heavy
|
| 507 |
+
dtype: string
|
| 508 |
- name: v_alignment_end_heavy
|
| 509 |
+
dtype: string
|
| 510 |
- name: d_alignment_start_heavy
|
| 511 |
+
dtype: string
|
| 512 |
- name: d_alignment_end_heavy
|
| 513 |
+
dtype: string
|
| 514 |
- name: j_alignment_start_heavy
|
| 515 |
+
dtype: string
|
| 516 |
- name: j_alignment_end_heavy
|
| 517 |
+
dtype: string
|
| 518 |
- name: v_sequence_alignment_heavy
|
| 519 |
dtype: string
|
| 520 |
- name: v_sequence_alignment_aa_heavy
|
|
|
|
| 570 |
- name: junction_heavy
|
| 571 |
dtype: string
|
| 572 |
- name: junction_length_heavy
|
| 573 |
+
dtype: string
|
| 574 |
- name: junction_aa_heavy
|
| 575 |
dtype: string
|
| 576 |
- name: junction_aa_length_heavy
|
| 577 |
+
dtype: string
|
| 578 |
- name: v_score_heavy
|
| 579 |
+
dtype: string
|
| 580 |
- name: d_score_heavy
|
| 581 |
+
dtype: string
|
| 582 |
- name: j_score_heavy
|
| 583 |
+
dtype: string
|
| 584 |
- name: v_cigar_heavy
|
| 585 |
dtype: string
|
| 586 |
- name: d_cigar_heavy
|
|
|
|
| 588 |
- name: j_cigar_heavy
|
| 589 |
dtype: string
|
| 590 |
- name: v_support_heavy
|
| 591 |
+
dtype: string
|
| 592 |
- name: d_support_heavy
|
| 593 |
+
dtype: string
|
| 594 |
- name: j_support_heavy
|
| 595 |
+
dtype: string
|
| 596 |
- name: v_identity_heavy
|
| 597 |
+
dtype: string
|
| 598 |
- name: d_identity_heavy
|
| 599 |
+
dtype: string
|
| 600 |
- name: j_identity_heavy
|
| 601 |
+
dtype: string
|
| 602 |
- name: v_sequence_start_heavy
|
| 603 |
+
dtype: string
|
| 604 |
+
- name: v_sequence_end_heavy
|
| 605 |
+
dtype: string
|
| 606 |
+
- name: v_germline_start_heavy
|
| 607 |
+
dtype: string
|
| 608 |
+
- name: v_germline_end_heavy
|
| 609 |
+
dtype: string
|
| 610 |
+
- name: d_sequence_start_heavy
|
| 611 |
+
dtype: string
|
| 612 |
+
- name: d_sequence_end_heavy
|
| 613 |
+
dtype: string
|
| 614 |
+
- name: d_germline_start_heavy
|
| 615 |
+
dtype: string
|
| 616 |
+
- name: d_germline_end_heavy
|
| 617 |
+
dtype: string
|
| 618 |
+
- name: j_sequence_start_heavy
|
| 619 |
+
dtype: string
|
| 620 |
+
- name: j_sequence_end_heavy
|
| 621 |
+
dtype: string
|
| 622 |
+
- name: j_germline_start_heavy
|
| 623 |
+
dtype: string
|
| 624 |
+
- name: j_germline_end_heavy
|
| 625 |
+
dtype: string
|
| 626 |
+
- name: fwr1_start_heavy
|
| 627 |
+
dtype: string
|
| 628 |
+
- name: fwr1_end_heavy
|
| 629 |
+
dtype: string
|
| 630 |
+
- name: cdr1_start_heavy
|
| 631 |
+
dtype: string
|
| 632 |
+
- name: cdr1_end_heavy
|
| 633 |
+
dtype: string
|
| 634 |
+
- name: fwr2_start_heavy
|
| 635 |
+
dtype: string
|
| 636 |
+
- name: fwr2_end_heavy
|
| 637 |
+
dtype: string
|
| 638 |
+
- name: cdr2_start_heavy
|
| 639 |
+
dtype: string
|
| 640 |
+
- name: cdr2_end_heavy
|
| 641 |
+
dtype: string
|
| 642 |
+
- name: fwr3_start_heavy
|
| 643 |
+
dtype: string
|
| 644 |
+
- name: fwr3_end_heavy
|
| 645 |
+
dtype: string
|
| 646 |
+
- name: fwr4_start_heavy
|
| 647 |
+
dtype: string
|
| 648 |
+
- name: fwr4_end_heavy
|
| 649 |
+
dtype: string
|
| 650 |
+
- name: cdr3_start_heavy
|
| 651 |
+
dtype: string
|
| 652 |
+
- name: cdr3_end_heavy
|
| 653 |
+
dtype: string
|
| 654 |
+
- name: np1_heavy
|
| 655 |
+
dtype: string
|
| 656 |
+
- name: np1_length_heavy
|
| 657 |
+
dtype: string
|
| 658 |
+
- name: np2_heavy
|
| 659 |
+
dtype: string
|
| 660 |
+
- name: np2_length_heavy
|
| 661 |
+
dtype: string
|
| 662 |
+
- name: c_region_heavy
|
| 663 |
+
dtype: string
|
| 664 |
+
- name: Isotype_heavy
|
| 665 |
+
dtype: string
|
| 666 |
+
- name: Redundancy_heavy
|
| 667 |
+
dtype: string
|
| 668 |
+
- name: ANARCI_numbering_heavy
|
| 669 |
+
dtype: string
|
| 670 |
+
- name: ANARCI_status_heavy
|
| 671 |
+
dtype: string
|
| 672 |
+
|
| 673 |
+
# Light chain fields
|
| 674 |
+
- name: sequence_id_light
|
| 675 |
+
dtype: string
|
| 676 |
+
- name: sequence_light
|
| 677 |
+
dtype: string
|
| 678 |
+
- name: locus_light
|
| 679 |
+
dtype: string
|
| 680 |
+
- name: stop_codon_light
|
| 681 |
+
dtype: string
|
| 682 |
+
- name: vj_in_frame_light
|
| 683 |
+
dtype: string
|
| 684 |
+
- name: v_frameshift_light
|
| 685 |
+
dtype: string
|
| 686 |
+
- name: productive_light
|
| 687 |
+
dtype: string
|
| 688 |
+
- name: rev_comp_light
|
| 689 |
+
dtype: string
|
| 690 |
+
- name: complete_vdj_light
|
| 691 |
+
dtype: string
|
| 692 |
+
- name: v_call_light
|
| 693 |
+
dtype: string
|
| 694 |
+
- name: d_call_light
|
| 695 |
+
dtype: string
|
| 696 |
+
- name: j_call_light
|
| 697 |
+
dtype: string
|
| 698 |
+
- name: sequence_alignment_light
|
| 699 |
+
dtype: string
|
| 700 |
+
- name: germline_alignment_light
|
| 701 |
+
dtype: string
|
| 702 |
+
- name: sequence_alignment_aa_light
|
| 703 |
+
dtype: string
|
| 704 |
+
- name: germline_alignment_aa_light
|
| 705 |
+
dtype: string
|
| 706 |
+
- name: v_alignment_start_light
|
| 707 |
+
dtype: string
|
| 708 |
+
- name: v_alignment_end_light
|
| 709 |
+
dtype: string
|
| 710 |
+
- name: d_alignment_start_light
|
| 711 |
+
dtype: string
|
| 712 |
+
- name: d_alignment_end_light
|
| 713 |
+
dtype: string
|
| 714 |
+
- name: j_alignment_start_light
|
| 715 |
+
dtype: string
|
| 716 |
+
- name: j_alignment_end_light
|
| 717 |
+
dtype: string
|
| 718 |
+
- name: v_sequence_alignment_light
|
| 719 |
+
dtype: string
|
| 720 |
+
- name: v_sequence_alignment_aa_light
|
| 721 |
+
dtype: string
|
| 722 |
+
- name: v_germline_alignment_light
|
| 723 |
+
dtype: string
|
| 724 |
+
- name: v_germline_alignment_aa_light
|
| 725 |
+
dtype: string
|
| 726 |
+
- name: d_sequence_alignment_light
|
| 727 |
+
dtype: string
|
| 728 |
+
- name: d_sequence_alignment_aa_light
|
| 729 |
+
dtype: string
|
| 730 |
+
- name: d_germline_alignment_light
|
| 731 |
+
dtype: string
|
| 732 |
+
- name: d_germline_alignment_aa_light
|
| 733 |
+
dtype: string
|
| 734 |
+
- name: j_sequence_alignment_light
|
| 735 |
+
dtype: string
|
| 736 |
+
- name: j_sequence_alignment_aa_light
|
| 737 |
+
dtype: string
|
| 738 |
+
- name: j_germline_alignment_light
|
| 739 |
+
dtype: string
|
| 740 |
+
- name: j_germline_alignment_aa_light
|
| 741 |
+
dtype: string
|
| 742 |
+
- name: fwr1_light
|
| 743 |
+
dtype: string
|
| 744 |
+
- name: fwr1_aa_light
|
| 745 |
+
dtype: string
|
| 746 |
+
- name: cdr1_light
|
| 747 |
+
dtype: string
|
| 748 |
+
- name: cdr1_aa_light
|
| 749 |
+
dtype: string
|
| 750 |
+
- name: fwr2_light
|
| 751 |
+
dtype: string
|
| 752 |
+
- name: fwr2_aa_light
|
| 753 |
+
dtype: string
|
| 754 |
+
- name: cdr2_light
|
| 755 |
+
dtype: string
|
| 756 |
+
- name: cdr2_aa_light
|
| 757 |
+
dtype: string
|
| 758 |
+
- name: fwr3_light
|
| 759 |
+
dtype: string
|
| 760 |
+
- name: fwr3_aa_light
|
| 761 |
+
dtype: string
|
| 762 |
+
- name: fwr4_light
|
| 763 |
+
dtype: string
|
| 764 |
+
- name: fwr4_aa_light
|
| 765 |
+
dtype: string
|
| 766 |
+
- name: cdr3_light
|
| 767 |
+
dtype: string
|
| 768 |
+
- name: cdr3_aa_light
|
| 769 |
+
dtype: string
|
| 770 |
+
- name: junction_light
|
| 771 |
+
dtype: string
|
| 772 |
+
- name: junction_length_light
|
| 773 |
+
dtype: string
|
| 774 |
+
- name: junction_aa_light
|
| 775 |
+
dtype: string
|
| 776 |
+
- name: junction_aa_length_light
|
| 777 |
+
dtype: string
|
| 778 |
+
- name: v_score_light
|
| 779 |
+
dtype: string
|
| 780 |
+
- name: d_score_light
|
| 781 |
+
dtype: string
|
| 782 |
+
- name: j_score_light
|
| 783 |
+
dtype: string
|
| 784 |
+
- name: v_cigar_light
|
| 785 |
+
dtype: string
|
| 786 |
+
- name: d_cigar_light
|
| 787 |
+
dtype: string
|
| 788 |
+
- name: j_cigar_light
|
| 789 |
+
dtype: string
|
| 790 |
+
- name: v_support_light
|
| 791 |
+
dtype: string
|
| 792 |
+
- name: d_support_light
|
| 793 |
+
dtype: string
|
| 794 |
+
- name: j_support_light
|
| 795 |
+
dtype: string
|
| 796 |
+
- name: v_identity_light
|
| 797 |
+
dtype: string
|
| 798 |
+
- name: d_identity_light
|
| 799 |
+
dtype: string
|
| 800 |
+
- name: j_identity_light
|
| 801 |
+
dtype: string
|
| 802 |
+
- name: v_sequence_start_light
|
| 803 |
+
dtype: string
|
| 804 |
+
- name: v_sequence_end_light
|
| 805 |
+
dtype: string
|
| 806 |
+
- name: v_germline_start_light
|
| 807 |
+
dtype: string
|
| 808 |
+
- name: v_germline_end_light
|
| 809 |
+
dtype: string
|
| 810 |
+
- name: d_sequence_start_light
|
| 811 |
+
dtype: string
|
| 812 |
+
- name: d_sequence_end_light
|
| 813 |
+
dtype: string
|
| 814 |
+
- name: d_germline_start_light
|
| 815 |
+
dtype: string
|
| 816 |
+
- name: d_germline_end_light
|
| 817 |
+
dtype: string
|
| 818 |
+
- name: j_sequence_start_light
|
| 819 |
+
dtype: string
|
| 820 |
+
- name: j_sequence_end_light
|
| 821 |
+
dtype: string
|
| 822 |
+
- name: j_germline_start_light
|
| 823 |
+
dtype: string
|
| 824 |
+
- name: j_germline_end_light
|
| 825 |
+
dtype: string
|
| 826 |
+
- name: fwr1_start_light
|
| 827 |
+
dtype: string
|
| 828 |
+
- name: fwr1_end_light
|
| 829 |
+
dtype: string
|
| 830 |
+
- name: cdr1_start_light
|
| 831 |
+
dtype: string
|
| 832 |
+
- name: cdr1_end_light
|
| 833 |
+
dtype: string
|
| 834 |
+
- name: fwr2_start_light
|
| 835 |
+
dtype: string
|
| 836 |
+
- name: fwr2_end_light
|
| 837 |
+
dtype: string
|
| 838 |
+
- name: cdr2_start_light
|
| 839 |
+
dtype: string
|
| 840 |
+
- name: cdr2_end_light
|
| 841 |
+
dtype: string
|
| 842 |
+
- name: fwr3_start_light
|
| 843 |
+
dtype: string
|
| 844 |
+
- name: fwr3_end_light
|
| 845 |
+
dtype: string
|
| 846 |
+
- name: fwr4_start_light
|
| 847 |
+
dtype: string
|
| 848 |
+
- name: fwr4_end_light
|
| 849 |
+
dtype: string
|
| 850 |
+
- name: cdr3_start_light
|
| 851 |
+
dtype: string
|
| 852 |
+
- name: cdr3_end_light
|
| 853 |
+
dtype: string
|
| 854 |
+
- name: np1_light
|
| 855 |
+
dtype: string
|
| 856 |
+
- name: np1_length_light
|
| 857 |
+
dtype: string
|
| 858 |
+
- name: np2_light
|
| 859 |
+
dtype: string
|
| 860 |
+
- name: np2_length_light
|
| 861 |
+
dtype: string
|
| 862 |
+
- name: c_region_light
|
| 863 |
+
dtype: string
|
| 864 |
+
- name: Isotype_light
|
| 865 |
+
dtype: string
|
| 866 |
+
- name: Redundancy_light
|
| 867 |
+
dtype: string
|
| 868 |
+
- name: ANARCI_numbering_light
|
| 869 |
+
dtype: string
|
| 870 |
+
- name: ANARCI_status_light
|
| 871 |
+
dtype: string
|
| 872 |
data_files: paired/*.csv
|
| 873 |
---
|
| 874 |
|