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Clarify CarePath cohort, task counts and paired analyses

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L6/full100_inputs_scored217/README.md CHANGED
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- # Full100 CarePath
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- Full100 contains 100 pathology inputs, 100 MRI inputs and 217 scored care decisions from 100 patients. Six treatment questions are unscored; their reasons are in `unscored/care_pending_review.jsonl`.
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- MRI references describe image-based structure invasion and T stage. The clinical TNM assessment in the care context can integrate PET/CT and other examinations. Full100 uses AJCC edition 9.
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  Form each care request by inserting the model's pathology/MRI predictions into the specified template fields. The remaining clinical context is supplied with the question. Earlier care answers are not fed into subsequent decisions in the main task.
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+ # CarePath cohort
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+ The CarePath cohort contains 100 patients and 417 scored tasks: 100 pathology assessments, 100 MRI T-stage assessments and 217 care decisions. Six treatment questions are unscored; their reasons are in `unscored/care_pending_review.jsonl`.
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+ MRI references describe image-based structure invasion and T stage. The clinical TNM assessment in the care context can integrate PET/CT and other examinations. MRI T staging uses AJCC edition 9.
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  Form each care request by inserting the model's pathology/MRI predictions into the specified template fields. The remaining clinical context is supplied with the question. Earlier care answers are not fed into subsequent decisions in the main task.
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README.md CHANGED
@@ -70,7 +70,7 @@ nasopharyngeal carcinoma.
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  | L3 | 69 pathology cases; 200 sequence questions; 2,700 structure cards from 100 patients; T400 and N400 |
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  | L4 | 165 planning questions from 84 patients |
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  | L5 | 305 decisions from 100 patients |
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- | L6 | 100 patients, 217 scored care decisions |
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  | O1 | 103 consultations from 42 cases, 1,726 scoring criteria |
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  ## Files and inputs
@@ -97,16 +97,17 @@ for 300 patients. N staging uses sequence groups for 400 patients. The group
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  images retain 512×512 display tiles and enter one multi-image request per patient.
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  [The MRI data guide](L3/extensions/README.md) describes layouts and sampling.
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- Full100 uses AJCC edition 9 for MRI. Its archive contains pathology, MRI and care
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- inputs, labels, and episode membership. Six treatment questions have no scored
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- reference answer; their exclusion reasons are provided. Twenty-five patients
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- have matched pathology, while 75 use assigned pathology specimens. The separate
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- 25-case control in `supplementary/carepath25/` tests specified evidence and history
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- interventions. Its decision set differs from Full100.
 
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  `supplementary/` also contains answer-format, longitudinal-history, MRI cine and
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  physician-calibration material. Calibration labels describe sampled consultation
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- responses; they are not physician labels for every Full100 patient.
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  ## Patients and privacy
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  | L3 | 69 pathology cases; 200 sequence questions; 2,700 structure cards from 100 patients; T400 and N400 |
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  | L4 | 165 planning questions from 84 patients |
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  | L5 | 305 decisions from 100 patients |
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+ | L6 | 100 patients, 417 scored tasks: 100 pathology, 100 MRI T, 217 care decisions |
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  | O1 | 103 consultations from 42 cases, 1,726 scoring criteria |
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  ## Files and inputs
 
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  images retain 512×512 display tiles and enter one multi-image request per patient.
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  [The MRI data guide](L3/extensions/README.md) describes layouts and sampling.
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+ The 100-patient CarePath cohort uses AJCC edition 9 for MRI T staging. Its archive
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+ contains pathology, MRI and care inputs, labels, and episode membership. Six
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+ treatment questions have no scored reference answer; their exclusion reasons are
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+ provided. Twenty-five patients have matched pathology, while 75 use assigned
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+ pathology specimens. Evidence-replacement and interaction analyses in
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+ `supplementary/carepath25/` use 146 fixed care questions for 25 patients within
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+ this cohort. The main Care score uses 217 decisions across all 100 patients.
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  `supplementary/` also contains answer-format, longitudinal-history, MRI cine and
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  physician-calibration material. Calibration labels describe sampled consultation
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+ responses; they are not physician labels for every CarePath patient.
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  ## Patients and privacy
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supplementary/README.md CHANGED
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  - `option_free/`: 71 matched guideline questions with and without answer options.
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  - `l5_history/`: full-history, time-stripped snapshot, order-only and strict-history inputs. The serial directory contains packed, current-delta and episode-replay inputs for 87 patients and 292 decisions.
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- - `carepath25/`: the 25-case evidence-replacement and interaction controls, with 146 selected care decisions.
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  - `carepath_history/`: episode definitions for care-history comparisons.
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  - `full100_schema/`: the explicit MRI response-format control.
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  - `external_mri/`: 53 T-stage cases from Nanfang Hospital, with their ten-panel inputs.
 
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  - `option_free/`: 71 matched guideline questions with and without answer options.
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  - `l5_history/`: full-history, time-stripped snapshot, order-only and strict-history inputs. The serial directory contains packed, current-delta and episode-replay inputs for 87 patients and 292 decisions.
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+ - `carepath25/`: evidence-replacement and interaction analyses using 146 fixed care questions for 25 patients within the 100-patient CarePath cohort.
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  - `carepath_history/`: episode definitions for care-history comparisons.
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  - `full100_schema/`: the explicit MRI response-format control.
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  - `external_mri/`: 53 T-stage cases from Nanfang Hospital, with their ten-panel inputs.
supplementary/full100_schema/README.md CHANGED
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- # Full100 MRI response-format control
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- This 100-patient prompt set explicitly lists the JSON response fields for structure invasion, involved structures, T stage and imaging evidence. It uses the Full100 MRI images and AJCC ninth-edition reference labels.
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  The control changes response-format instructions for 75 patients. The remaining 25 prompts already contain the full schema. Compare care answers only when the actual image-derived input fields differ.
 
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+ # CarePath MRI response-format control
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+ This 100-patient prompt set explicitly lists the JSON response fields for structure invasion, involved structures, T stage and imaging evidence. It uses the CarePath MRI images and AJCC ninth-edition reference labels.
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  The control changes response-format instructions for 75 patients. The remaining 25 prompts already contain the full schema. Compare care answers only when the actual image-derived input fields differ.