#!/usr/bin/env python3 """Fail closed on schema, provenance, count and checksum errors.""" import hashlib import json import re from datetime import datetime from pathlib import Path from urllib.parse import parse_qs, urlparse, quote ROOT = Path(__file__).resolve().parent QUERIES = {"insomnia", "cognitive behavioral therapy insomnia", "circadian rhythm sleep", "obstructive sleep apnea"} KEYS = {"id", "doi", "titles", "author_names", "journal_names", "publisher", "crossref_type", "publication_date_parts", "doi_url", "query_memberships", "source_endpoint", "retrieved_at_utc"} def validate(): manifest = json.loads((ROOT / "manifest.json").read_text(encoding="utf-8")) payload = (ROOT / "sleep-discovery.jsonl").read_bytes() rows = [json.loads(line) for line in payload.decode("utf-8").splitlines()] assert 0 < len(rows) <= 40 assert manifest["record_count"] == len(rows) assert manifest["sha256"] == hashlib.sha256(payload).hexdigest() assert manifest["compilation_license"] == "CC0-1.0" assert {request["query"] for request in manifest["requests"]} == QUERIES assert len(manifest["requests"]) == 4 for request in manifest["requests"]: parsed = urlparse(request["url"]) assert parsed.scheme == "https" and parsed.netloc == "api.crossref.org" and parsed.path == "/works" assert parse_qs(parsed.query) == {"query": [request["query"]], "filter": ["type:journal-article"], "rows": ["10"]} assert 0 <= request["returned_count"] <= 10 dois = [row["doi"] for row in rows] assert len(set(dois)) == len(dois) assert dois == sorted(dois) for row in rows: assert set(row) == KEYS assert isinstance(row["doi"], str) and row["doi"].startswith("10.") and row["doi"] == row["doi"].lower() assert row["id"] == "doi:" + row["doi"] assert row["crossref_type"] == "journal-article" assert row["doi_url"] == "https://doi.org/" + quote(row["doi"], safe="/") assert row["source_endpoint"] == "https://api.crossref.org/works/" + quote(row["doi"], safe="") for key in ("titles", "author_names", "journal_names", "query_memberships"): assert isinstance(row[key], list) and all(isinstance(value, str) for value in row[key]) # Literal inequalities can appear in titles; reject HTML/XML tags only. assert all(not re.search(r"]*>", title) for title in row["titles"]) assert row["query_memberships"] and set(row["query_memberships"]) <= QUERIES assert len(row["query_memberships"]) == len(set(row["query_memberships"])) assert isinstance(row["publisher"], str) assert isinstance(row["publication_date_parts"], list) assert all(isinstance(parts, list) and 1 <= len(parts) <= 3 and all(isinstance(number, int) for number in parts) for parts in row["publication_date_parts"]) assert datetime.fromisoformat(row["retrieved_at_utc"].replace("Z", "+00:00")).utcoffset().total_seconds() == 0 print("PASS: {} unique DOI records; exact allowlist, provenance and SHA256 verified.".format(len(rows))) if __name__ == "__main__": validate()