Upload main.ipynb with huggingface_hub
Browse files- main.ipynb +20 -16
main.ipynb
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@@ -81,7 +81,7 @@
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},
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{
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"cell_type": "code",
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"execution_count":
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"id": "489193ba-061f-4815-88bc-d247e47e868c",
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"metadata": {},
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"outputs": [
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},
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{
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"cell_type": "code",
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"execution_count":
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"id": "598a041f-8410-445f-8b7f-5fcc4fce0712",
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"metadata": {},
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"outputs": [
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@@ -611,7 +611,7 @@
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"Loading concatenated nsdgeneral voxels from all betas_sessions for NSD subj01\n",
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"nsd_vox (30000, 15724)\n",
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"voxels have been zscored\n",
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"
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]
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}
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],
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@@ -623,7 +623,11 @@
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" nsd_vox = file['subj01'][:] # (30000, 15724)\n",
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" print(\"nsd_vox\", nsd_vox.shape)\n",
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"\n",
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"
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" print(\"voxels have been zscored\")\n",
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" print(nsd_vox[:,0].mean(), nsd_vox[:,0].std())\n",
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"except:\n",
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},
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{
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"cell_type": "code",
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"execution_count":
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"id": "954c9282-1627-4b79-9bc5-607cfb771157",
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"metadata": {},
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"outputs": [
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},
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{
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"cell_type": "code",
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"execution_count":
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"id": "5fa54e09-0830-471e-8364-e9a2af5a4047",
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"metadata": {},
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"outputs": [
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},
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{
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"cell_type": "code",
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"execution_count":
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"id": "4c21a67b-f6df-4db2-b691-9c0935e8210d",
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"metadata": {},
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"outputs": [
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"100%|ββββββββββββββββββββββββββββββββββ| 15724/15724 [00:00<00:00,
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]
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{
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},
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{
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"cell_type": "code",
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"execution_count":
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"id": "351ea533-f62a-4ee6-ae73-7cb430c27d94",
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"metadata": {},
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"outputs": [
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"(150, 2, 15724)"
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]
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},
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"execution_count":
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"metadata": {},
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"output_type": "execute_result"
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}
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},
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{
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"cell_type": "code",
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"execution_count":
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"id": "0fcd3c21-8d45-4384-8709-c28ccd0869b9",
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"metadata": {},
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"outputs": [
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"100%|βββββββββββββββββββββββββββββββββββββββββ| 150/150 [00:05<00:00,
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"100%|βββββββββββββββββββββββββββββββββββββββββ| 150/150 [00:04<00:00, 34.
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"100%|βββββββββββββββββββββββββββββββββββββββββ| 150/150 [00:03<00:00,
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"100%|βββββββββββββββββββββββββββββββββββββββββ| 150/150 [00:02<00:00,
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{
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"cell_type": "code",
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"execution_count":
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"id": "5dbbb1e1-7ed9-43a9-b482-b1005bbaf6c7",
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"metadata": {},
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"outputs": [
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},
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{
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"cell_type": "code",
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"execution_count": 52,
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"id": "489193ba-061f-4815-88bc-d247e47e868c",
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"metadata": {},
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"outputs": [
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},
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{
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"cell_type": "code",
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"execution_count": 50,
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"id": "598a041f-8410-445f-8b7f-5fcc4fce0712",
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"metadata": {},
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"outputs": [
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"Loading concatenated nsdgeneral voxels from all betas_sessions for NSD subj01\n",
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"nsd_vox (30000, 15724)\n",
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"voxels have been zscored\n",
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"-9.177843670234628e-19 0.9999999979254887\n"
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]
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}
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],
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" nsd_vox = file['subj01'][:] # (30000, 15724)\n",
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" print(\"nsd_vox\", nsd_vox.shape)\n",
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"\n",
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" # session-wise zscoring\n",
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" for start_idx in range(0,len(nsd_vox),750):\n",
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" end_idx = min(start_idx + 750, len(nsd_vox))\n",
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" nsd_vox[start_idx:end_idx] = zscore(nsd_vox[start_idx:end_idx])\n",
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"\n",
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" print(\"voxels have been zscored\")\n",
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" print(nsd_vox[:,0].mean(), nsd_vox[:,0].std())\n",
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"except:\n",
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},
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{
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"cell_type": "code",
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"execution_count": 54,
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"id": "954c9282-1627-4b79-9bc5-607cfb771157",
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"metadata": {},
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"outputs": [
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},
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{
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"cell_type": "code",
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"execution_count": 55,
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"id": "5fa54e09-0830-471e-8364-e9a2af5a4047",
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"metadata": {},
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"outputs": [
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{
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"cell_type": "code",
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"execution_count": 56,
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"id": "4c21a67b-f6df-4db2-b691-9c0935e8210d",
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"metadata": {},
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"outputs": [
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"100%|ββββββββββββββββββββββββββββββββββ| 15724/15724 [00:00<00:00, 22100.95it/s]"
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"cell_type": "code",
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"execution_count": 57,
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"id": "351ea533-f62a-4ee6-ae73-7cb430c27d94",
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"metadata": {},
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"outputs": [
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"(150, 2, 15724)"
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]
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},
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"execution_count": 57,
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"metadata": {},
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"output_type": "execute_result"
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}
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"cell_type": "code",
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"execution_count": 58,
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"id": "0fcd3c21-8d45-4384-8709-c28ccd0869b9",
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"metadata": {},
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"outputs": [
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"100%|βββββββββββββββββββββββββββββββββββββββββ| 150/150 [00:05<00:00, 29.30it/s]\n"
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"100%|βββββββββββββββββββββββββββββββββββββββββ| 150/150 [00:04<00:00, 34.58it/s]\n"
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"text": [
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"100%|βββββββββββββββββββββββββββββββββββββββββ| 150/150 [00:03<00:00, 44.06it/s]\n"
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"100%|βββββββββββββββββββββββββββββββββββββββββ| 150/150 [00:02<00:00, 51.37it/s]\n"
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"cell_type": "code",
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"execution_count": 59,
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"id": "5dbbb1e1-7ed9-43a9-b482-b1005bbaf6c7",
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"metadata": {},
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"outputs": [
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