import Mathlib
import OAI.Computability.MaxCut.Machines.MachineBinaryNameCompare

namespace OAI

/-!
The actual cursor loop for sparse-name renaming. A finite three-position slot
counts completed clauses. Each nonempty cursor test calls the checked literal
machine, then pushes one variable-count bit. Every third literal also pushes
one clause-count bit. No instruction counts an unbounded list in finite control.

All nine literal-machine tapes retain their meanings. Tapes 9 and 10 are the
variable and clause counters. The original token stream is preserved; the
cursor is exhausted, the six work tapes are restored, and the output contains
the reversed concatenation of exactly the emitted literal words.
-/

namespace MaxCutGames.BinaryRenameLoop

open Turing
open MaxCutGames.Foundations.Complexity
open MachineComposition

abbrev Token := BinaryNameSearch.Token

def nextSlot (slot : Fin 3) : Fin 3 := if slot = 0 then 1 else if slot = 1 then 2 else 0

def clauseIncrement (slot : Fin 3) : Nat := if slot = 2 then 1 else 0

def finalSlot : Nat → Fin 3 → Fin 3
  | 0, slot => slot
  | n + 1, slot => finalSlot n (nextSlot slot)

def completedClauses : Nat → Fin 3 → Nat
  | 0, _ => 0
  | n + 1, slot => completedClauses n (nextSlot slot) + clauseIncrement slot

theorem finalSlot_three (n : Nat) : finalSlot (n + 3) 0 = finalSlot n 0 := by
  simp [finalSlot, nextSlot]

theorem completedClauses_three (n : Nat) :
    completedClauses (n + 3) 0 = completedClauses n 0 + 1 := by
  simp [completedClauses, nextSlot, clauseIncrement]

@[simp] theorem finalSlot_triples (n : Nat) : finalSlot (3 * n) 0 = 0 := by
  induction n with
  | zero => rfl
  | succ n ih => rw [Nat.mul_succ, finalSlot_three, ih]

@[simp] theorem completedClauses_triples (n : Nat) : completedClauses (3 * n) 0 = n := by
  induction n with
  | zero => rfl
  | succ n ih => rw [Nat.mul_succ, completedClauses_three, ih]

def outputBody (tokens input : List Token) : List Bool :=
  input.flatMap (fun token => BinaryLiteralMachine.outputWord tokens token.2 token.1)

@[simp] theorem outputBody_nil (tokens : List Token) : outputBody tokens [] = [] := rfl

@[simp] theorem outputBody_cons (tokens : List Token) (token : Token) (input : List Token) :
    outputBody tokens (token :: input) =
      BinaryLiteralMachine.outputWord tokens token.2 token.1 ++ outputBody tokens input := rfl

def steps (tokens : List Token) : List Token → Nat
  | [] => 1
  | token :: input => BinaryLiteralMachine.steps tokens token.2 + 2 + steps tokens input

theorem payload_length_le_stream (tokens : List Token) (bits : List Bool)
    (present : bits ∈ BinaryNameSearch.payloads tokens) :
    bits.length ≤ (BinaryNameSearch.stream tokens).length := by
  induction tokens with
  | nil => simp at present
  | cons token tokens ih =>
      rcases List.mem_cons.mp present with equal | remaining
      · rw [equal]
        simp only [BinaryNameSearch.stream_cons, List.length_append,
          BinaryNameSearch.tokenBits, List.length_cons, BinaryNameMachine.frame_length]
        omega
      · have tail := ih remaining
        simp only [BinaryNameSearch.stream_cons, List.length_append]
        omega

def perLiteralBound (streamLength : Nat) : Nat :=
  12 * streamLength ^ 2 + 26 * streamLength + 11

theorem literal_steps_le (tokens : List Token) (bits : List Bool)
    (present : bits ∈ BinaryNameSearch.payloads tokens) :
    BinaryLiteralMachine.steps tokens bits + 2 ≤
      perLiteralBound (BinaryNameSearch.stream tokens).length := by
  have body := BinaryLiteralMachine.steps_le tokens bits present
  have size := payload_length_le_stream tokens bits present
  have sumBound : (BinaryNameSearch.stream tokens).length + bits.length ≤
      2 * (BinaryNameSearch.stream tokens).length := by omega
  have sq := Nat.mul_self_le_mul_self sumBound
  unfold perLiteralBound
  nlinarith

theorem steps_le (tokens input : List Token) (included : ∀ token ∈ input, token ∈ tokens) :
    steps tokens input ≤
      perLiteralBound (BinaryNameSearch.stream tokens).length * input.length + 1 := by
  induction input with
  | nil => simp [steps]
  | cons token input ih =>
      have present : token.2 ∈ BinaryNameSearch.payloads tokens :=
        List.mem_map.mpr ⟨token, included token (by simp), rfl⟩
      have head := literal_steps_le tokens token.2 present
      have tail := ih (fun t ht => included t (by simp [ht]))
      simp only [steps, List.length_cons]
      nlinarith

theorem steps_le_cubic (tokens input : List Token)
    (included : ∀ token ∈ input, token ∈ tokens)
    (countBound : input.length ≤ (BinaryNameSearch.stream tokens).length) :
    steps tokens input ≤
      12 * (BinaryNameSearch.stream tokens).length ^ 3 +
      26 * (BinaryNameSearch.stream tokens).length ^ 2 +
      11 * (BinaryNameSearch.stream tokens).length + 1 := by
  calc
    steps tokens input ≤
        perLiteralBound (BinaryNameSearch.stream tokens).length * input.length + 1 :=
      steps_le tokens input included
    _ ≤ perLiteralBound (BinaryNameSearch.stream tokens).length *
        (BinaryNameSearch.stream tokens).length + 1 :=
      Nat.add_le_add_right (Nat.mul_le_mul_left _ countBound) _
    _ = _ := by unfold perLiteralBound; ring

variable {K Λ A : Type} [DecidableEq K]

abbrev Alphabet (_ : K) := Bool
abbrev State (A : Type) := BinaryLiteralMachine.State (A × Fin 3)
abbrev clean (ambient : A) (slot : Fin 3) : State A :=
  BinaryLiteralMachine.clean (ambient, slot)

inductive Label
  | entry
  | literal (label : BinaryLiteralMachine.Label)
  | tally
  deriving DecidableEq, Fintype

def literalTapes (tape : Fin 11 → K) : Fin 9 → K := fun i => tape i.castSucc.castSucc

omit [DecidableEq K] in
theorem literalTapes_injective (tape : Fin 11 → K) (distinct : Function.Injective tape) :
    Function.Injective (literalTapes tape) := by
  intro i j h
  apply Fin.ext
  exact congrArg (fun i : Fin 11 => i.val) (distinct h)

def finish (exit : Option Λ) : TM2.Stmt (Alphabet (K := K)) Λ (State A) :=
  .load (fun state => clean state.1.1.1.1 state.1.1.1.2)
    (match exit with
      | none => .halt
      | some label => .goto fun _ => label)

def next (again : Λ) : TM2.Stmt (Alphabet (K := K)) Λ (State A) :=
  .load (fun state => clean state.1.1.1.1 (nextSlot state.1.1.1.2))
    (.goto fun _ => again)

def instruction (tape : Fin 11 → K) (labels : Label → Λ)
    (done malformed : Option Λ) : Label → TM2.Stmt (Alphabet (K := K)) Λ (State A)
  | .entry =>
      .pop (tape 0) (fun state head => (state.1, head))
        (.branch (fun state => state.2.isSome)
          (.push (tape 0) (fun state => state.2.getD false)
            (finish (some (labels (.literal .readSign)))))
          (finish done))
  | .literal l => BinaryLiteralMachine.instruction (literalTapes tape)
      (fun l => labels (.literal l)) (some (labels .tally)) malformed l
  | .tally =>
      .push (tape 9) (fun _ => true)
        (.branch (fun state => state.1.1.1.2 == (2 : Fin 3))
          (.push (tape 10) (fun _ => true) (next (labels .entry)))
          (next (labels .entry)))

/-- These are the only four stacks changed by the complete loop. -/
def loopTapes (tape : Fin 11 → K) (base : K → List Bool)
    (cursor output variableCounter clauses : List Bool) : K → List Bool :=
  Function.update (Function.update (Function.update (Function.update base
    (tape 0) cursor) (tape 8) output) (tape 9) variableCounter) (tape 10) clauses

theorem loopTapes_cursor (tape : Fin 11 → K) (distinct : Function.Injective tape)
    (base : K → List Bool) (cursor output variableCounter clauses : List Bool) :
    loopTapes tape base cursor output variableCounter clauses (tape 0) = cursor := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  simp [loopTapes, hd]

theorem loopTapes_output (tape : Fin 11 → K) (distinct : Function.Injective tape)
    (base : K → List Bool) (cursor output variableCounter clauses : List Bool) :
    loopTapes tape base cursor output variableCounter clauses (tape 8) = output := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  simp [loopTapes, hd]

theorem loopTapes_variables (tape : Fin 11 → K) (distinct : Function.Injective tape)
    (base : K → List Bool) (cursor output variableCounter clauses : List Bool) :
    loopTapes tape base cursor output variableCounter clauses (tape 9) = variableCounter := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  simp [loopTapes, hd]

theorem loopTapes_clauses (tape : Fin 11 → K)
    (base : K → List Bool) (cursor output variableCounter clauses : List Bool) :
    loopTapes tape base cursor output variableCounter clauses (tape 10) = clauses := by
  simp [loopTapes]

private theorem update_cursor_inline_MachineBinaryRenameLoop (tape : Fin 11 → K) (distinct : Function.Injective tape)
    (base : K → List Bool) (cursor output variableCounter clauses replacement : List Bool) :
    Function.update (loopTapes tape base cursor output variableCounter clauses) (tape 0) replacement =
      loopTapes tape base replacement output variableCounter clauses := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  funext k
  by_cases h : k = tape 0
  · subst k; simp [loopTapes, hd]
  · simp [loopTapes, h, Function.update_apply]

private theorem update_output_inline_MachineBinaryRenameLoop (tape : Fin 11 → K) (distinct : Function.Injective tape)
    (base : K → List Bool) (cursor output variableCounter clauses replacement : List Bool) :
    Function.update (loopTapes tape base cursor output variableCounter clauses) (tape 8) replacement =
      loopTapes tape base cursor replacement variableCounter clauses := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  funext k
  by_cases h : k = tape 8
  · subst k; simp [loopTapes, hd]
  · simp [loopTapes, h, Function.update_apply]

private theorem update_variables_inline_MachineBinaryRenameLoop (tape : Fin 11 → K) (distinct : Function.Injective tape)
    (base : K → List Bool) (cursor output variableCounter clauses replacement : List Bool) :
    Function.update (loopTapes tape base cursor output variableCounter clauses) (tape 9) replacement =
      loopTapes tape base cursor output replacement clauses := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  funext k
  by_cases h : k = tape 9
  · subst k; simp [loopTapes, hd]
  · simp [loopTapes, h, Function.update_apply]

private theorem update_clauses_inline_MachineBinaryRenameLoop (tape : Fin 11 → K)
    (base : K → List Bool) (cursor output variableCounter clauses replacement : List Bool) :
    Function.update (loopTapes tape base cursor output variableCounter clauses) (tape 10) replacement =
      loopTapes tape base cursor output variableCounter replacement := by
  simp [loopTapes]

theorem loopTapes_other (tape : Fin 11 → K) (base : K → List Bool)
    (cursor output variableCounter clauses : List Bool) (k : K)
    (h0 : k ≠ tape 0) (h8 : k ≠ tape 8) (h9 : k ≠ tape 9) (h10 : k ≠ tape 10) :
    loopTapes tape base cursor output variableCounter clauses k = base k := by
  simp [loopTapes, h0, h8, h9, h10]

@[simp] theorem stepAux_finish (exit : Option Λ) (state : State A) (base : K → List Bool) :
    TM2.stepAux (finish exit) state base =
      ⟨exit, clean state.1.1.1.1 state.1.1.1.2, base⟩ := by
  cases exit <;> rfl

private theorem joinTrace_inline_MachineBinaryRenameLoop {X : Type*} {f : X → X} {a b c : X} {n m : Nat}
    (first : f^[n] a = b) (second : f^[m] b = c) : f^[n + m] a = c := by
  rw [Nat.add_comm, Function.iterate_add_apply, first, second]

variable (tape : Fin 11 → K) (distinct : Function.Injective tape)
variable (labels : Label → Λ) (done malformed : Option Λ)
variable (program : Λ → TM2.Stmt (Alphabet (K := K)) Λ (State A))
variable (atLabels : ∀ l, program (labels l) = instruction tape labels done malformed l)
variable (base : K → List Bool) (ambient : A)

include distinct atLabels

theorem peekStep (slot : Fin 3) (head : Bool) (tail output variableCounter clauses : List Bool) :
    TM2.step program
      ⟨some (labels .entry), clean ambient slot,
        loopTapes tape base (head :: tail) output variableCounter clauses⟩ =
      some ⟨some (labels (.literal .readSign)), clean ambient slot,
        loopTapes tape base (head :: tail) output variableCounter clauses⟩ := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  change some (TM2.stepAux (program (labels .entry)) _ _) = _
  rw [atLabels .entry]
  simp [instruction, TM2.stepAux, clean, BinaryLiteralMachine.clean, BinaryNameCompare.clean,
    loopTapes_cursor tape distinct, update_cursor_inline_MachineBinaryRenameLoop tape distinct]

theorem emptyStep (slot : Fin 3) (output variableCounter clauses : List Bool) :
    TM2.step program
      ⟨some (labels .entry), clean ambient slot,
        loopTapes tape base [] output variableCounter clauses⟩ =
      some ⟨done, clean ambient slot, loopTapes tape base [] output variableCounter clauses⟩ := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  change some (TM2.stepAux (program (labels .entry)) _ _) = _
  rw [atLabels .entry]
  simp [instruction, TM2.stepAux, clean, BinaryLiteralMachine.clean, BinaryNameCompare.clean,
    loopTapes_cursor tape distinct, update_cursor_inline_MachineBinaryRenameLoop tape distinct]

theorem tallyStep (slot : Fin 3) (cursor output variableCounter clauses : List Bool) :
    TM2.step program
      ⟨some (labels .tally), clean ambient slot,
        loopTapes tape base cursor output variableCounter clauses⟩ =
      some ⟨some (labels .entry), clean ambient (nextSlot slot),
        loopTapes tape base cursor output (true :: variableCounter)
          (List.replicate (clauseIncrement slot) true ++ clauses)⟩ := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  change some (TM2.stepAux (program (labels .tally)) _ _) = _
  rw [atLabels .tally]
  fin_cases slot <;>
    simp [instruction, TM2.stepAux, clean, BinaryLiteralMachine.clean, BinaryNameCompare.clean,
      next, nextSlot, clauseIncrement, loopTapes_variables tape distinct, loopTapes_clauses,
      update_variables_inline_MachineBinaryRenameLoop tape distinct, update_clauses_inline_MachineBinaryRenameLoop]

/-- Peek, execute the checked literal program, then update the two counters. -/
theorem bodyTrace (tokens : List Token) (token : Token) (slot : Fin 3)
    (suffix output variableCounter clauses : List Bool)
    (canonical : BinaryNameMachine.canonical token.2 = true)
    (tokensCanonical : ∀ t ∈ tokens, BinaryNameMachine.canonical t.2 = true)
    (present : token.2 ∈ BinaryNameSearch.payloads tokens)
    (permanent : base (tape 1) = BinaryNameSearch.stream tokens)
    (empty : ∀ i : Fin 11, 2 ≤ i.val → i.val ≤ 7 → base (tape i) = []) :
    (advance (TM2.step program))^[BinaryLiteralMachine.steps tokens token.2 + 2]
      (some ⟨some (labels .entry), clean ambient slot,
        loopTapes tape base (BinaryNameSearch.tokenBits token ++ suffix) output variableCounter clauses⟩) =
      some ⟨some (labels .entry), clean ambient (nextSlot slot),
        loopTapes tape base suffix
          ((BinaryLiteralMachine.outputWord tokens token.2 token.1).reverse ++ output)
          (true :: variableCounter) (List.replicate (clauseIncrement slot) true ++ clauses)⟩ := by
  have hd (i j : Fin 11) (hne : i ≠ j) : tape i ≠ tape j := fun h => hne (distinct h)
  let initial := loopTapes tape base (BinaryNameSearch.tokenBits token ++ suffix)
    output variableCounter clauses
  have first : (advance (TM2.step program))^[1]
      (some ⟨some (labels .entry), clean ambient slot, initial⟩) =
      some ⟨some (labels (.literal .readSign)), clean ambient slot, initial⟩ := by
    simpa only [Function.iterate_one, advance_some, initial,
      BinaryNameSearch.tokenBits, List.cons_append] using
      peekStep tape distinct labels done malformed program atLabels base ambient slot token.1
        (BinaryNameMachine.frame token.2 ++ suffix) output variableCounter clauses
  have workEmpty (i : Fin 11) (lo : 2 ≤ i.val) (hi : i.val ≤ 7) :
      initial (tape i) = [] := by
    have h0 : i ≠ 0 := by intro h; subst i; omega
    have h8 : i ≠ 8 := by intro h; subst i; omega
    have h9 : i ≠ 9 := by intro h; subst i; omega
    have h10 : i ≠ 10 := by intro h; subst i; omega
    simpa [initial, loopTapes, hd i 0 h0, hd i 8 h8, hd i 9 h9, hd i 10 h10]
      using empty i lo hi
  have literal := BinaryLiteralMachine.literalTrace (literalTapes tape)
    (literalTapes_injective tape distinct) (fun l => labels (.literal l))
    (some (labels .tally)) malformed program (fun l => atLabels (.literal l))
    initial tokens token.1 token.2 suffix canonical tokensCanonical present
    (by simp [initial, literalTapes, loopTapes, BinaryNameSearch.tokenBits, hd])
    (by simpa [initial, literalTapes, loopTapes, hd] using permanent)
    (fun i lo hi => workEmpty i.castSucc.castSucc lo hi) (ambient, slot)
  have finalTapes :
      Function.update (Function.update initial (literalTapes tape 0) suffix)
        (literalTapes tape 8)
        ((BinaryLiteralMachine.outputWord tokens token.2 token.1).reverse ++
          initial (literalTapes tape 8)) =
      loopTapes tape base suffix
        ((BinaryLiteralMachine.outputWord tokens token.2 token.1).reverse ++ output)
        variableCounter clauses := by
    have out : initial (literalTapes tape 8) = output := by
      simp [initial, literalTapes, loopTapes, hd]
    rw [out]
    change Function.update (Function.update
      (loopTapes tape base (BinaryNameSearch.tokenBits token ++ suffix) output variableCounter clauses)
      (tape 0) suffix) (tape 8) _ = _
    rw [update_cursor_inline_MachineBinaryRenameLoop tape distinct, update_output_inline_MachineBinaryRenameLoop tape distinct]
  rw [finalTapes] at literal
  have tally : (advance (TM2.step program))^[1]
      (some ⟨some (labels .tally), clean ambient slot,
        loopTapes tape base suffix
          ((BinaryLiteralMachine.outputWord tokens token.2 token.1).reverse ++ output)
          variableCounter clauses⟩) =
      some ⟨some (labels .entry), clean ambient (nextSlot slot),
        loopTapes tape base suffix
          ((BinaryLiteralMachine.outputWord tokens token.2 token.1).reverse ++ output)
          (true :: variableCounter) (List.replicate (clauseIncrement slot) true ++ clauses)⟩ := by
    simpa only [Function.iterate_one, advance_some] using
      tallyStep tape distinct labels done malformed program atLabels base ambient slot suffix
        ((BinaryLiteralMachine.outputWord tokens token.2 token.1).reverse ++ output)
        variableCounter clauses
  have full := joinTrace_inline_MachineBinaryRenameLoop (joinTrace_inline_MachineBinaryRenameLoop first literal) tally
  simpa only [show 1 + BinaryLiteralMachine.steps tokens token.2 + 1 =
    BinaryLiteralMachine.steps tokens token.2 + 2 by omega] using full

/-- Full loop execution, including the final empty-cursor test. -/
theorem loopTrace (tokens input : List Token) (slot : Fin 3)
    (output variableCounter clauses : List Bool)
    (tokensCanonical : ∀ t ∈ tokens, BinaryNameMachine.canonical t.2 = true)
    (included : ∀ t ∈ input, t ∈ tokens)
    (permanent : base (tape 1) = BinaryNameSearch.stream tokens)
    (empty : ∀ i : Fin 11, 2 ≤ i.val → i.val ≤ 7 → base (tape i) = []) :
    (advance (TM2.step program))^[steps tokens input]
      (some ⟨some (labels .entry), clean ambient slot,
        loopTapes tape base (BinaryNameSearch.stream input) output variableCounter clauses⟩) =
      some ⟨done, clean ambient (finalSlot input.length slot),
        loopTapes tape base [] ((outputBody tokens input).reverse ++ output)
          (List.replicate input.length true ++ variableCounter)
          (List.replicate (completedClauses input.length slot) true ++ clauses)⟩ := by
  induction input generalizing slot output variableCounter clauses with
  | nil =>
      simpa only [steps, Function.iterate_one, advance_some, BinaryNameSearch.stream_nil,
        List.length_nil, outputBody_nil, List.reverse_nil, List.nil_append,
        finalSlot, completedClauses, List.replicate_zero] using
        emptyStep tape distinct labels done malformed program atLabels base ambient
          slot output variableCounter clauses
  | cons token input ih =>
      have member := included token (by simp)
      have present : token.2 ∈ BinaryNameSearch.payloads tokens :=
        List.mem_map.mpr ⟨token, member, rfl⟩
      have first := bodyTrace tape distinct labels done malformed program atLabels base ambient
        tokens token slot (BinaryNameSearch.stream input) output variableCounter clauses
        (tokensCanonical token member) tokensCanonical present permanent empty
      have rest := ih (nextSlot slot)
        ((BinaryLiteralMachine.outputWord tokens token.2 token.1).reverse ++ output)
        (true :: variableCounter) (List.replicate (clauseIncrement slot) true ++ clauses)
        (fun t ht => included t (by simp [ht]))
      have full := joinTrace_inline_MachineBinaryRenameLoop first rest
      have variableEq : List.replicate input.length true ++ (true :: variableCounter) =
          List.replicate (input.length + 1) true ++ variableCounter := by
        rw [List.replicate_succ']
        simp only [List.append_assoc, List.singleton_append]
      have clauseEq : List.replicate (completedClauses input.length (nextSlot slot)) true ++
          (List.replicate (clauseIncrement slot) true ++ clauses) =
          List.replicate (completedClauses (input.length + 1) slot) true ++ clauses := by
        rw [← List.append_assoc, ← List.replicate_add]
        rfl
      simpa only [steps, BinaryNameSearch.stream_cons, List.length_cons, finalSlot,
        outputBody_cons, List.reverse_append, List.append_assoc, variableEq, clauseEq] using full

/-- On complete triples the finite slot is reset and the two counters are exact. -/
theorem triplesTrace (tokens input : List Token) (count : Nat)
    (length_eq : input.length = 3 * count) (output variableCounter clauses : List Bool)
    (tokensCanonical : ∀ t ∈ tokens, BinaryNameMachine.canonical t.2 = true)
    (included : ∀ t ∈ input, t ∈ tokens)
    (permanent : base (tape 1) = BinaryNameSearch.stream tokens)
    (empty : ∀ i : Fin 11, 2 ≤ i.val → i.val ≤ 7 → base (tape i) = []) :
    (advance (TM2.step program))^[steps tokens input]
      (some ⟨some (labels .entry), clean ambient 0,
        loopTapes tape base (BinaryNameSearch.stream input) output variableCounter clauses⟩) =
      some ⟨done, clean ambient 0,
        loopTapes tape base [] ((outputBody tokens input).reverse ++ output)
          (List.replicate (3 * count) true ++ variableCounter)
          (List.replicate count true ++ clauses)⟩ := by
  have h := loopTrace tape distinct labels done malformed program atLabels base ambient
    tokens input 0 output variableCounter clauses tokensCanonical included permanent empty
  simpa only [length_eq, finalSlot_triples, completedClauses_triples] using h

/-- The machine's bit-length bound includes every peek, literal run, and tally. -/
def triplesInTime (tokens input : List Token) (count : Nat)
    (length_eq : input.length = 3 * count) (output variableCounter clauses : List Bool)
    (tokensCanonical : ∀ t ∈ tokens, BinaryNameMachine.canonical t.2 = true)
    (included : ∀ t ∈ input, t ∈ tokens)
    (permanent : base (tape 1) = BinaryNameSearch.stream tokens)
    (empty : ∀ i : Fin 11, 2 ≤ i.val → i.val ≤ 7 → base (tape i) = []) :
    StateTransition.EvalsToInTime (TM2.step program)
      ⟨some (labels .entry), clean ambient 0,
        loopTapes tape base (BinaryNameSearch.stream input) output variableCounter clauses⟩
      (some ⟨done, clean ambient 0,
        loopTapes tape base [] ((outputBody tokens input).reverse ++ output)
          (List.replicate (3 * count) true ++ variableCounter)
          (List.replicate count true ++ clauses)⟩)
      (perLiteralBound (BinaryNameSearch.stream tokens).length * input.length + 1) where
  steps := steps tokens input
  evals_in_steps := triplesTrace tape distinct labels done malformed program atLabels base ambient
    tokens input count length_eq output variableCounter clauses tokensCanonical included permanent empty
  steps_le_m := steps_le tokens input included

end MaxCutGames.BinaryRenameLoop

/-!
An actual finite Boolean-stack machine which removes formula/clause markers
from valid ordinary-binary 3CNF encodings. Literal signs and every bit of each
framed binary name survive in their original occurrence order. The first pass
accumulates the output in reverse; the checked transfer routine restores order.

The machine is specified on the semantic encoded-input domain. It does not
claim to reject every malformed or noncanonical input. In particular, the
name-copying loop does not check canonicality: valid input already supplies it.
All transitions inspect only finite control and one popped bit. No branch or
load computes a whole-list function or converts a binary name to unary.
-/

namespace MaxCutGames.BinaryTokenMachine

open Turing
open MaxCutGames.Foundations.Complexity
open MachineComposition
open MaxCutGames.Reduction.MachineTransfer
open BinaryFormula BinaryEncoding

abbrev Tape := Fin 3
abbrev Alphabet (_ : Tape) := Bool
abbrev State := Unit × Option Bool

inductive Label where
  | clause
  | sign (slot : Fin 3)
  | name (slot : Fin 3)
  | restore
  | accept
  | reject
  deriving DecidableEq, Fintype

def afterName (slot : Fin 3) : Label :=
  if slot = 0 then .sign 1 else if slot = 1 then .sign 2 else .clause

@[simp] theorem afterName_zero : afterName 0 = .sign 1 := rfl
@[simp] theorem afterName_one : afterName 1 = .sign 2 := rfl
@[simp] theorem afterName_two : afterName 2 = .clause := rfl

def jump (label : Label) : TM2.Stmt Alphabet Label State :=
  .load (fun _ => ((), none)) (.goto fun _ => label)

/-- Discard a clause marker, or finish at the final formula terminator. -/
def clauseInstruction : TM2.Stmt Alphabet Label State :=
  .pop 0 (fun state head => (state.1, head))
    (.branch (fun state => state.2.isNone)
      (jump .reject)
      (.branch (fun state => state.2.getD false)
        (jump (.sign 0)) (jump .restore)))

def signInstruction (slot : Fin 3) : TM2.Stmt Alphabet Label State :=
  .pop 0 (fun state head => (state.1, head))
    (.branch (fun state => state.2.isSome)
      (.push 1 (fun state => state.2.getD false) (jump (.name slot)))
      (jump .reject))

/-- Copy both symbols of a payload pair, or copy the name terminator. -/
def nameInstruction (slot : Fin 3) : TM2.Stmt Alphabet Label State :=
  .pop 0 (fun state head => (state.1, head))
    (.branch (fun state => state.2.isNone)
      (jump .reject)
      (.branch (fun state => state.2.getD false)
        (.push 1 (fun _ => true)
          (.pop 0 (fun state head => (state.1, head))
            (.branch (fun state => state.2.isSome)
              (.push 1 (fun state => state.2.getD false) (jump (.name slot)))
              (jump .reject))))
        (.push 1 (fun _ => false) (jump (afterName slot)))))

def program : Label → TM2.Stmt Alphabet Label State
  | .clause => clauseInstruction
  | .sign slot => signInstruction slot
  | .name slot => nameInstruction slot
  | .restore => loopAt 1 2 id false .restore (some .accept)
  | .accept => .halt
  | .reject => .halt

abbrev machine : FinTM2 where
  K := Tape
  k₀ := 0
  k₁ := 2
  Γ := Alphabet
  Λ := Label
  main := .clause
  σ := State
  initialState := ((), none)
  m := program

def tapes (input reversed output : List Bool) : Tape → List Bool :=
  fun k => if k = 0 then input else if k = 1 then reversed else output

def cfg (label : Option Label) (input reversed output : List Bool)
    (register : Option Bool := none) : machine.Cfg :=
  ⟨label, ((), register), tapes input reversed output⟩

@[simp] private theorem tapes_zero (input reversed output : List Bool) :
    tapes input reversed output 0 = input := rfl

@[simp] private theorem tapes_one (input reversed output : List Bool) :
    tapes input reversed output 1 = reversed := rfl

@[simp] private theorem tapes_two (input reversed output : List Bool) :
    tapes input reversed output 2 = output := rfl

private theorem update_zero_inline_MachineBinaryTokenMachine (input reversed output replacement : List Bool) :
    Function.update (tapes input reversed output) 0 replacement =
      tapes replacement reversed output := by
  funext k
  fin_cases k <;> simp [tapes]

private theorem update_one_inline_MachineBinaryTokenMachine (input reversed output replacement : List Bool) :
    Function.update (tapes input reversed output) 1 replacement =
      tapes input replacement output := by
  funext k
  fin_cases k <;> simp [tapes]

theorem clauseStep (input reversed output : List Bool) (register : Option Bool) :
    machine.step (cfg (some .clause) (true :: input) reversed output register) =
      some (cfg (some (.sign 0)) input reversed output) := by
  change some (TM2.stepAux (program .clause) _ _) = _
  simp [program, clauseInstruction, jump, cfg, TM2.stepAux, update_zero_inline_MachineBinaryTokenMachine]
  rfl

theorem finalStep (input reversed output : List Bool) (register : Option Bool) :
    machine.step (cfg (some .clause) (false :: input) reversed output register) =
      some (cfg (some .restore) input reversed output) := by
  change some (TM2.stepAux (program .clause) _ _) = _
  simp [program, clauseInstruction, jump, cfg, TM2.stepAux, update_zero_inline_MachineBinaryTokenMachine]
  rfl

theorem signStep (slot : Fin 3) (bit : Bool) (input reversed output : List Bool)
    (register : Option Bool) :
    machine.step (cfg (some (.sign slot)) (bit :: input) reversed output register) =
      some (cfg (some (.name slot)) input (bit :: reversed) output) := by
  change some (TM2.stepAux (program (.sign slot)) _ _) = _
  simp [program, signInstruction, jump, cfg, TM2.stepAux, update_zero_inline_MachineBinaryTokenMachine, update_one_inline_MachineBinaryTokenMachine]
  rfl

theorem nameEndStep (slot : Fin 3) (input reversed output : List Bool)
    (register : Option Bool) :
    machine.step (cfg (some (.name slot)) (false :: input) reversed output register) =
      some (cfg (some (afterName slot)) input (false :: reversed) output) := by
  change some (TM2.stepAux (program (.name slot)) _ _) = _
  simp [program, nameInstruction, jump, cfg, TM2.stepAux, update_zero_inline_MachineBinaryTokenMachine, update_one_inline_MachineBinaryTokenMachine]
  rfl

theorem nameDigitStep (slot : Fin 3) (bit : Bool) (input reversed output : List Bool)
    (register : Option Bool) :
    machine.step
      (cfg (some (.name slot)) (true :: bit :: input) reversed output register) =
      some (cfg (some (.name slot)) input (bit :: true :: reversed) output) := by
  change some (TM2.stepAux (program (.name slot)) _ _) = _
  simp [program, nameInstruction, jump, cfg, TM2.stepAux, update_zero_inline_MachineBinaryTokenMachine, update_one_inline_MachineBinaryTokenMachine]
  rfl

theorem nameTrace (slot : Fin 3) (bits suffix reversed output : List Bool)
    (register : Option Bool) :
    (advance machine.step)^[bits.length + 1]
      (some (cfg (some (.name slot)) (frame bits ++ suffix) reversed output register)) =
      some (cfg (some (afterName slot)) suffix ((frame bits).reverse ++ reversed) output) := by
  induction bits generalizing reversed register with
  | nil =>
      simpa only [List.length_nil, Nat.zero_add, Function.iterate_one, advance_some,
        frame, List.singleton_append, List.reverse_singleton] using
        nameEndStep slot suffix reversed output register
  | cons bit bits ih =>
      rw [List.length_cons, Function.iterate_succ_apply]
      simp only [frame, List.cons_append, advance_some]
      rw [nameDigitStep, ih]
      simp only [List.reverse_cons, List.append_assoc,
        List.cons_append, List.nil_append]

theorem literalTrace (slot : Fin 3) (literal : Literal)
    (suffix reversed output : List Bool) (register : Option Bool) :
    (advance machine.step)^[literal.name.size + 2]
      (some (cfg (some (.sign slot)) (literalBits literal ++ suffix) reversed output register)) =
      some (cfg (some (afterName slot)) suffix
        ((literalBits literal).reverse ++ reversed) output) := by
  rw [show literal.name.size + 2 = (literal.name.bits.length + 1) + 1 by
    rw [Nat.size_eq_bits_len]]
  rw [Function.iterate_succ_apply]
  simp only [literalBits, List.cons_append, advance_some]
  rw [signStep]
  change (advance machine.step)^[literal.name.bits.length + 1]
    (some (cfg (some (.name slot)) (frame literal.name.bits ++ suffix)
      (literal.positive :: reversed) output)) = _
  rw [nameTrace]
  simp only [nameBits, List.reverse_cons, List.append_assoc, List.singleton_append]

private theorem joinTrace_inline_MachineBinaryTokenMachine {X : Type*} {f : X → X} {a b c : X} {n m : Nat}
    (first : f^[n] a = b) (second : f^[m] b = c) : f^[n + m] a = c := by
  rw [Nat.add_comm, Function.iterate_add_apply, first, second]

/-- Three literal subroutines return to the next clause boundary. -/
theorem clauseTrace (clause : Clause) (suffix reversed output : List Bool)
    (register : Option Bool) :
    (advance machine.step)^[clauseNameSize clause + 6]
      (some (cfg (some (.sign 0)) (clauseBits clause ++ suffix) reversed output register)) =
      some (cfg (some .clause) suffix ((clauseBits clause).reverse ++ reversed) output) := by
  have first := literalTrace 0 clause[0]
    (literalBits clause[1] ++ literalBits clause[2] ++ suffix) reversed output register
  have second := literalTrace 1 clause[1] (literalBits clause[2] ++ suffix)
    ((literalBits clause[0]).reverse ++ reversed) output none
  have third := literalTrace 2 clause[2] suffix
    ((literalBits clause[1]).reverse ++ ((literalBits clause[0]).reverse ++ reversed)) output none
  simp only [afterName_zero, afterName_one, afterName_two, List.append_assoc]
    at first second third
  have full := joinTrace_inline_MachineBinaryTokenMachine (joinTrace_inline_MachineBinaryTokenMachine first second) third
  have htime : (clause[0].name.size + 2 + (clause[1].name.size + 2)) +
      (clause[2].name.size + 2) = clauseNameSize clause + 6 := by
    simp [clauseNameSize, clauseNames]
    omega
  rw [htime] at full
  simpa only [clauseBits, List.append_assoc, List.reverse_append] using full

def tokens (clauses : List Clause) : List Bool := clauses.flatMap clauseBits

@[simp] theorem tokens_nil : tokens [] = [] := rfl

@[simp] theorem tokens_cons (clause : Clause) (clauses : List Clause) :
    tokens (clause :: clauses) = clauseBits clause ++ tokens clauses := by
  simp [tokens]

@[simp] theorem tokens_length (clauses : List Clause) :
    (tokens clauses).length = 6 * clauses.length + 2 * namesBitSize clauses := by
  induction clauses with
  | nil => rfl
  | cons clause clauses ih =>
      simp only [tokens_cons, List.length_append, clauseBits_length, ih,
        List.length_cons, namesBitSize_cons]
      omega

/-- Exact first-pass run, retaining the unread suffix and ambient output. -/
theorem stripTrace (clauses : List Clause) (suffix reversed output : List Bool)
    (register : Option Bool) :
    (advance machine.step)^[7 * clauses.length + namesBitSize clauses + 1]
      (some (cfg (some .clause) (clausesBits clauses ++ suffix) reversed output register)) =
      some (cfg (some .restore) suffix ((tokens clauses).reverse ++ reversed) output) := by
  induction clauses generalizing reversed register with
  | nil =>
      simpa only [List.length_nil, Nat.mul_zero, namesBitSize_nil, Nat.add_zero,
        Nat.zero_add, Function.iterate_one, advance_some, clausesBits,
        List.singleton_append, tokens_nil, List.reverse_nil, List.nil_append] using
        finalStep suffix reversed output register
  | cons clause clauses ih =>
      have first : (advance machine.step)^[1]
          (some (cfg (some .clause)
            (true :: (clauseBits clause ++ (clausesBits clauses ++ suffix)))
            reversed output register)) =
          some (cfg (some (.sign 0))
            (clauseBits clause ++ (clausesBits clauses ++ suffix)) reversed output) := by
        simpa only [Function.iterate_one, advance_some] using
          clauseStep (clauseBits clause ++ (clausesBits clauses ++ suffix)) reversed output register
      have second := clauseTrace clause (clausesBits clauses ++ suffix) reversed output none
      have third := ih ((clauseBits clause).reverse ++ reversed) none
      have full := joinTrace_inline_MachineBinaryTokenMachine (joinTrace_inline_MachineBinaryTokenMachine first second) third
      have htime : (1 + (clauseNameSize clause + 6)) +
          (7 * clauses.length + namesBitSize clauses + 1) =
          7 * (clause :: clauses).length + namesBitSize (clause :: clauses) + 1 := by
        simp only [List.length_cons, namesBitSize_cons]
        omega
      rw [htime] at full
      simpa only [clausesBits, List.cons_append, List.append_assoc,
        tokens_cons, List.reverse_append] using full

theorem restoreTrace (input unread output : List Bool) (register : Option Bool) :
    (advance machine.step)^[input.length + 1]
      (some (cfg (some .restore) unread input.reverse output register)) =
      some (cfg (some .accept) unread [] (input ++ output)) := by
  have h := transferAt_fromTapes (Γ := Alphabet) (σ := Unit) 1 2 (by decide)
    id false .restore (some .accept) program rfl
    (tapes unread input.reverse output) () register
  have ht : tapesAt 1 2 (tapes unread input.reverse output) [] (input ++ output) =
      tapes unread [] (input ++ output) := by
    funext k
    fin_cases k <;> simp [tapesAt, tapes]
  change (nextAt 2 program)^[input.length + 1]
    (some (cfg (some .restore) unread input.reverse output register)) = _
  simpa only [tapes_one, tapes_two, List.length_reverse, List.reverse_reverse,
    List.map_id_fun, id_eq, ht, nextAt, advance, cfg] using! h

theorem initList_eq (input : List Bool) :
    initList machine input = cfg (some .clause) input [] [] := by
  unfold initList cfg
  congr 1
  funext k
  fin_cases k <;> simp [tapes, machine]

theorem haltList_eq (output : List Bool) :
    haltList machine output = cfg none [] [] output := by
  unfold haltList cfg
  congr 1
  funext k
  fin_cases k <;> simp [tapes, machine]

theorem acceptTrace (formula : Formula) :
    (advance machine.step)^[13 * formula.clauses.length +
        3 * namesBitSize formula.clauses + 2]
      (some (initList machine (formulaBits formula))) =
      some (cfg (some .accept) [] [] (tokens formula.clauses)) := by
  have first := stripTrace formula.clauses [] [] [] none
  simp only [List.append_nil] at first
  have second := restoreTrace (tokens formula.clauses) [] [] none
  simp only [List.append_nil] at second
  have full := joinTrace_inline_MachineBinaryTokenMachine first second
  have htime : (7 * formula.clauses.length + namesBitSize formula.clauses + 1) +
      ((tokens formula.clauses).length + 1) =
      13 * formula.clauses.length + 3 * namesBitSize formula.clauses + 2 := by
    rw [tokens_length]
    omega
  rw [htime] at full
  simpa only [initList_eq, BinaryEncoding.formulaBits] using full

theorem haltStep (output : List Bool) :
    machine.step (cfg (some .accept) [] [] output) = some (cfg none [] [] output) := by
  change some (TM2.stepAux (program .accept) _ _) = _
  rfl

/-- Exact transition count for the complete finite-machine computation. -/
theorem tokenTrace (formula : Formula) :
    (advance machine.step)^[13 * formula.clauses.length +
        3 * namesBitSize formula.clauses + 3]
      (some (initList machine (formulaBits formula))) =
      some (haltList machine (tokens formula.clauses)) := by
  rw [show 13 * formula.clauses.length + 3 * namesBitSize formula.clauses + 3 =
    (13 * formula.clauses.length + 3 * namesBitSize formula.clauses + 2) + 1 by omega,
    Function.iterate_succ_apply', acceptTrace, advance_some, haltStep, haltList_eq]

theorem tokenSteps_le (formula : Formula) :
    13 * formula.clauses.length + 3 * namesBitSize formula.clauses + 3 ≤
      3 * (formulaBits formula).length + 3 := by
  rw [BinaryEncoding.formulaBits_length]
  omega

def outputsInTime (formula : Formula) :
    TM2OutputsInTime machine (formulaBits formula) (some (tokens formula.clauses))
      (3 * (formulaBits formula).length + 3) where
  steps := 13 * formula.clauses.length + 3 * namesBitSize formula.clauses + 3
  evals_in_steps := tokenTrace formula
  steps_le_m := tokenSteps_le formula

/-- A displayed finite machine and linear polynomial in the ordinary input
bit length, proved by the transitions above rather than assumed by a caller. -/
noncomputable def computableInPolyTime :
    TM2ComputableInPolyTime BinaryEncoding.formulaBits (id : List Bool → List Bool)
      (fun formula => tokens formula.clauses) where
  tm := machine
  inputAlphabet := Equiv.refl Bool
  outputAlphabet := Equiv.refl Bool
  time := Polynomial.C 3 * Polynomial.X + Polynomial.C 3
  outputsFun formula := by
    change TM2OutputsInTime machine ((formulaBits formula).map id)
      (some ((tokens formula.clauses).map id))
      ((Polynomial.C 3 * Polynomial.X + Polynomial.C 3 : Polynomial Nat).eval
        (formulaBits formula).length)
    simpa only [List.map_id_fun, id_eq, Polynomial.eval_add, Polynomial.eval_mul,
      Polynomial.eval_C, Polynomial.eval_X] using outputsInTime formula

theorem machine_finiteAlphabet (k : machine.K) : Finite (machine.Γ k) := by
  change Finite Bool
  infer_instance

end MaxCutGames.BinaryTokenMachine

end OAI