reference stringlengths 7 774 ⌀ | aptamer_chemistry stringclasses 21
values | aptamer_name stringlengths 1 164 | target_name stringlengths 2 1.2k ⌀ | aptamer_sequence stringlengths 2 380 | origin stringclasses 6
values | target_chemistry stringclasses 11
values | external_id stringclasses 509
values | target_sequence stringclasses 357
values | new_affinity stringlengths 3 193 ⌀ |
|---|---|---|---|---|---|---|---|---|---|
https://pubmed.ncbi.nlm.nih.gov/18230760/ | ssRNA | C13.51 | G-protein-coupled receptor kinase 2 (GRK2) | GGUUCGGGUAGCACAGACCAUACGGGAGAGAAACUUGUGCAACCCGGGGCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 101.2 nM ± 7.2 nM, 101,2 |
https://pubmed.ncbi.nlm.nih.gov/18617415/ | ssDNA | T7 | Tetracycline (TET), oxytetracycline (OTC), doxycycline (DOX) | CGTACGGAATTCGCTAGCGGGCAGCGGTGGTGTGGCGGGATCTGGGGTTgtgcGGTGTGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 357.8 nM, 357,8 |
https://pubmed.ncbi.nlm.nih.gov/18617415/ | ssDNA | T15 | Tetracycline (TET), oxytetracycline (OTC), doxycycline (DOX) | CGTACGGAATTCGCTAGCGGAGGAACGGGTTCCAGTGTGGGGTCTATCGGGGCgtgcGGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 197 nM, 197 |
https://pubmed.ncbi.nlm.nih.gov/18617415/ | ssDNA | T19 | Tetracycline (TET), oxytetracycline (OTC), doxycycline (DOX) | CGTACGGAATTCGCTAGCCGGGAGGGCGGGGTGTGGTATGTATTGAGCGTGGTCCGTGGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 424.8 nM, 424,8 |
https://pubmed.ncbi.nlm.nih.gov/18617415/ | ssDNA | T20 | Tetracycline (TET), oxytetracycline (OTC), doxycycline (DOX) | CGTACGGAATTCGCTAGCCCCCCGGCAGGCCACGGCTTGGGTTGGTCCCACTGCGCGTGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 63.6 nM, 63,6 |
https://pubmed.ncbi.nlm.nih.gov/18617415/ | ssDNA | T22 | Tetracycline (TET), oxytetracycline (OTC), doxycycline (DOX) | CGTACGGAATTCGCTAGCGGGCGGACGCTAGGTGGTGATGCTgtgcTACACGTGTTGTGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 483.5 nM, 483,5 |
https://pubmed.ncbi.nlm.nih.gov/18617415/ | ssDNA | T23 | Tetracycline (TET), oxytetracycline (OTC), doxycycline (DOX) | CGTACGGAATTCGCTAGCGGGGGCACACATGTAGgtgcTGTCCAGGTGTGGTTGTGGTGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 100.6 nM, 100,6 |
https://pubmed.ncbi.nlm.nih.gov/18617415/ | ssDNA | T24 | Tetracycline (TET), oxytetracycline (OTC), doxycycline (DOX) | CGTACGGAATTCGCTAGCGGGCGGGGgtgcTGGGGGAATGGAgtgcTGCgtgcTGCGGGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 70.7 nM, 70,7 |
https://pubmed.ncbi.nlm.nih.gov/19061867/ | ssDNA | aptamer 6 | (1→3)-β-D-glucans | CGACTGACGCCTCCAAGCCACACGTGTGAGAAGGGTGTTATCATGTATTTCGTGTTCCTTTCGTCATTCCTTTGTCTGCATGCATCGCTACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.303 ± 0.067 μM, 303 |
https://pubmed.ncbi.nlm.nih.gov/19061867/ | ssDNA | aptamer 30 | (1→3)-β-D-glucans | CGACTGACGCCTCCAAGCACATAGACAGCCTATCCTCGATTAGTTGTTGTTATGGTCCTATTCTCTCCATTCCGCTGTGCATGCATCGCTACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.326 ± 0.089 μM, 326 |
https://pubmed.ncbi.nlm.nih.gov/18175068/ | ssDNA | VEa4 | Vascular endothelial growth factor 165 (VEGF165) | ATACCAGTCTATTCAATTGGGCGGGGACTGTCGGGATGTGTGTGGGCCAGATAGTATGTGCAATCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 500 nM, 500 |
https://pubmed.ncbi.nlm.nih.gov/18175068/ | ssDNA | VEa5 | Vascular endothelial growth factor 165 (VEGF165) | ATACCAGTCTATTCAATTGGGCCCGTCCGTATGGTGGGTGTGCTGGCCAGATAGTATGTGCAATCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 130 nM, 130 |
https://pubmed.ncbi.nlm.nih.gov/19137093/ | ssDNA | FMD 1F | VP1 structural polypeptide of O-serotype FMD | ATACGGGAGCCAACACCATTCTATCGTTCCGGACGCTTATGCCTTGCCATCTACAGAGCAGGTGTGACGGAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19137093/ | ssDNA | FMD 1R | VP1 structural polypeptide of O-serotype FMD | ATCCGTCACTCCTGCTCTGTAGATGGCAAGGCATAAGCGTCCGGAACGATAGAATGGTGTTGGCTCCCGTAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19137093/ | ssDNA | FMD 10F | VP1 structural polypeptide of O-serotype FMD | ATACGGGAGCCAACACCATGAATATCTCTTCTACCTCCTCTCCTCCCTTTACTTAGAGCAGGTGTGACGGAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/18311508/ | ssDNA | ACh 6R | Acetylcholine | ATCCGTCACACCTGCTCTAGGGGATCAAAGCTATGCGACCATGCGAGTGGATACTGGTGTTGGCTCCCGTAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/18078808/ | ssDNA | A05 | Recombinant HA1 proteins of the H5N1 influenza virus | GAATTCAGTCGGACAGCGGGGGGGAATTCTAGCAGTACACCTCGAGAATTATAGCCAGGATGGACGAATATCGTCTCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/18078808/ | ssDNA | A10 | Recombinant HA1 proteins of the H5N1 influenza virus | GAATTCAGTCGGACAGCGGGTTCCCATGCGGATGTTATAAAGCAGTCGCTTATAAGGGATGGACGAATATCGTCTCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/18557632/ | ssRNA | RNA 20 | Drosophila muscleblind protein (Mbl) | GGGAAUGGAUCCACAUCUACGAAUUCACCGUAGAUGAUGGAUGUGCGGUAGAGUCUUUCACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.23 nM ± 0.09, 0,23 |
https://pubmed.ncbi.nlm.nih.gov/20375565/ | ssDNA | M7-2 | Lipopolysaccharide (LPS) | CCGGATCCGTTGATATAAAATTCTCTGGCTAGGATAGGCAGGAGTTTCATTACTTGTATGTTTTTGATTGTGGTGTTGGCTCCCAAGCTTCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/20375565/ | ssDNA | M7-1 | Lipopolysaccharide (LPS) | CCGGATCCGTTGATATAAAATTCTCTGGCTAGGATAGGCAGGAGTTTCATTACTTATATGTTTTTGATTGTGGTGTTGGCTCCCAAGCTTCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/20375565/ | ssDNA | M7-3/M7-6 | Lipopolysaccharide (LPS) | CCGGATCCGTTGATATAAAATTCTCCGGCTAGGATAGGCAGGAGTTTCATTACTTGTATGTTTTTGATTGTGGTGTTGGCTCCCAAGCTTCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/20375565/ | ssDNA | M7-13 | Lipopolysaccharide (LPS) | CCGGATCCGTTGATATAAAATTCTCTGGCTAGGATAGGCAGGTGTTTCATTACTTGTATGTTTTTGATTGTGGTGTTGGCTCCCAAGCTTCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/20375565/ | ssDNA | M7-14 | Lipopolysaccharide (LPS) | CCGGATCCGTTGATATAAAATTCTCTGGCTAGGATAGGCAGGAGCTTCATTATTTGTATGTTTTTGATTGTGGTGTTGGCTCCCAAGCTTCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/20375565/ | ssDNA | M7-22 | Lipopolysaccharide (LPS) | CCGGATCCGTTGATATAAAATTCTCTGGCTAAGATAAACAAGGAGTTTCATTACTTGTATGTTTTTGATTGTGGTGTTGGCTCCCAAGCTTCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/20375565/ | ssDNA | M7-5 | Lipopolysaccharide (LPS) | CCGGATCCGTTGATATAAAATTCTAGTCAGGTGAAGTCCGCGGCTAACAATTCAGTAGGTTATTGATTGTGGTGTTGGCTCCCAAGCTTCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19098441/ | ssRNA | Apt #1 | Bovine Prion Protein (bPrP) | GGGAGGUGGAACUGAAGGAGACAAUCCAUUCAUCUCUCGAAUGAGGAAGUAGCCCAAGAGGAGGAGGAGGAUGAGCACUUCGCAAUCGCUCUACGCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 82 ± 21 nM, 82 |
https://pubmed.ncbi.nlm.nih.gov/19997645/ | ssDNA | ZE2 | Hepatitis C virus (HCV) envelope surface glycoprotein E2 | GCGGAATTCTAATACGACTCACTATAGGGAACAGTCCGAGCCGAATGAGGAATAATCTAGCTCCTTCGCTGAGGGTCAATGCGTCATA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd 1.05±1 nM, 1,05 |
https://pubmed.ncbi.nlm.nih.gov/19997645/ | ssDNA | ZE3 | Hepatitis C virus (HCV) envelope surface glycoprotein E3 | GCGGAATTCTAATACGACTCACTATAGGGAACAGTCCGAGCCCGCCGTATTAAGATTGGGAGACCTGGTAGAGGGTCAATGCGTCATA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd 3.22±0.7 nM, 3,22 |
https://pubmed.ncbi.nlm.nih.gov/19997645/ | ssDNA | ZE5 | Hepatitis C virus (HCV) envelope surface glycoprotein E4 | GCGGAATTCTAATACGACTCACTATAGGGAACAGTCCGAGCCTCCATTCATGTAACGAACATAGTTTTGGCAGGGTCAATGCGTCATA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd 4.29±0.6 nM, 4,29 |
https://pubmed.ncbi.nlm.nih.gov/19668864/ | ssRNA | N2 | Amyloid beta-peptide (Aβ) | GGGAUGUUCUAGGCGGUUGAUGAUAGCGUAUGCCACUCUCCUGGGACCCCCCGCCGGAUGGCCACAUCCAGAGUAGCAUAAUUGAUCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 21.6 μM, 21600 |
https://pubmed.ncbi.nlm.nih.gov/19668864/ | ssRNA | E2 | Amyloid beta-peptide (Aβ) | GGGAUGUUCUAGGCGGUUGAUGAUUUGGGGUGUCGGGCGAUUUUUAGGGUUGGGCCAGGCCGUCAUCCAGAGUAGCAUAAUUGAUCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10.9 μM, 10900 |
https://pubmed.ncbi.nlm.nih.gov/19246617/ | ssDNA | TV01 | Vaccinia virus–infected lung cancer A549 cells | ATCGTCTGCTCCGTCCAATAGTGCATTGAAACTTCTGCATCCTCGTTTGGTGTGAGGTCGTGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 7.3 ± 1.4 nM, 7,3 |
https://pubmed.ncbi.nlm.nih.gov/19246617/ | ssDNA | TV02 | Vaccinia virus–infected lung cancer A549 cells | ATCGTCTGCTCCGTCCAATACCTGCATATACACTTTGCATGTGGTTTGGTGTGAGGTCGTGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 3.6 ± 0.48 nM, 3,6 |
https://pubmed.ncbi.nlm.nih.gov/19246617/ | ssDNA | TV03 | Vaccinia virus–infected lung cancer A549 cells | ATCGTCTGCTCCGTCCAATAGCGTGCATTGGTTTACTGCATCCGTGAAACTGGGCTTTGGTGTGAGGTCGTGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 4.1 ± 0.59 nM, 4,1 |
https://pubmed.ncbi.nlm.nih.gov/19246617/ | ssDNA | TV04 | Vaccinia virus–infected lung cancer A549 cells | ATCGTCTGCTCCGTCCAATAAACCTGCATAATTTATAAGTCTAGACTGCTGCATTTGGTGTGAGGTCGTGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 6.5 ± 0.94 nM, 6,5 |
https://pubmed.ncbi.nlm.nih.gov/19246617/ | ssDNA | TV05 | Vaccinia virus–infected lung cancer A549 cells | ATCGTCTGCTCCGTCCAATAGCCTCACCCTGCATAATTTATAGACTACACTTAGGAATCGCTGCATTTGGTGTGAGGTCGTGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 4.1 ± 0.44 nM, 4,1 |
https://pubmed.ncbi.nlm.nih.gov/19246617/ | ssDNA | TV06 | Vaccinia virus–infected lung cancer A549 cells | ATCGTCTGCTCCGTCCAATAGGACCGATAGGAACCACGGACTGCATGTTTCTGCATTTGACGTGGTTTGGTGTGAGGTCGTGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 6.5 ± 1.3 nM, 6,5 |
https://pubmed.ncbi.nlm.nih.gov/19246617/ | ssDNA | TV07 | Vaccinia virus–infected lung cancer A549 cells | ATCGTCTGCTCCGTCCAATATCCGAGCAAGAACTCATATTGCATTATTTATAGCTACGCGCTGCATTTGGTGTGAGGTCGTGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 11.7 ± 2.9 nM, 11,9 |
https://pubmed.ncbi.nlm.nih.gov/19246617/ | ssDNA | TV08 | Vaccinia virus–infected lung cancer A549 cells | ATCGTCTGCTCCGTCCAATATGATGACACCTGCATAATTTATAGTGAGTCTTGATTCACGCTGCATTTGGTGTGAGGTCGTGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.7 ± 6.2 nM, 2,7 |
https://pubmed.ncbi.nlm.nih.gov/19040357/ | 2'-fluoro-RNA | E21 | Histidine-tagged epidermal growth factor receptor variant III (EGFRvIII) ectodomain | GGGAGGACGAUGCGGUACCAAGAUCCCACAACUAGCCGACCACAAUUGCCGGCCACAGACGACUCGCUGAGGAUCCGAGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 33 nM, 33 |
https://pubmed.ncbi.nlm.nih.gov/19040357/ | 2'-fluoro-RNA | E17 | Histidine-tagged epidermal growth factor receptor variant III (EGFRvIII) ectodomain | GGGAGGACGAUGCGGACCAAAAUCAACGCAAAGAGCGCGCCUGCACGUCACCUCACAGACGACUCGCUGAGGAUCCGAGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 50 nM, 50 |
https://pubmed.ncbi.nlm.nih.gov/19151784/ | ssDNA | KH1C12 | Acute myeloid leukemia cells (HL60) | ATCCAGAGTGACGCAGCATGCCCTAGTTACTACTACTCTTTTTAGCAAACGCCCTCGCTTTGGACACGGTGGCTTAGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 4.5± 1.6 nM, 4,5 |
https://pubmed.ncbi.nlm.nih.gov/19151784/ | ssDNA | KHG11 | Acute myeloid leukemia cells (HL60) | ATCCAGAGTGACGCAGCATGCTCATCCACGATTCTGGCGAATTTAGTGCCTGTCTTTTTCTCTTGGACACGGTGGCTTAGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 6.1 + 2.1 nM, 6,1 |
https://pubmed.ncbi.nlm.nih.gov/19151784/ | ssDNA | KH2B05 | Acute myeloid leukemia cells (HL60) | ATCCAGAGTGACGCAGCACACACAACCTGCTCATAAACTTTACTCTGCTCGAACCATCTCTGGACACGGTGGCTTAGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 184.5 ± 20.2 nM, 184,6 |
https://pubmed.ncbi.nlm.nih.gov/19151784/ | ssDNA | KH1A02 | Acute myeloid leukemia cells (HL60) | ATCCAGAGTGACGCAGCAGGCATAGATGTGCAGCTCCAAGGAGAAGAAGGAGTTCTGTGTATTGGACACGGTGGCTTAGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 106.1 ± 15.4 nM, 106,1 |
https://pubmed.ncbi.nlm.nih.gov/19151784/ | ssDNA | KK1B10 | Acute myeloid leukemia cells (HL60) | ATCCAGAGTGACGCAGCAGATCAGTCTATCTTCTCCTGATGGGTTCCTATTTATAGGTGAAGCTGGACACGGTGGCTTAGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 256.0 ± 72.0 nM, 256 |
https://pubmed.ncbi.nlm.nih.gov/19151784/ | ssDNA | KK1D04 | Acute myeloid leukemia cells (HL60) | ATCCAGAGTGACGCAGCACAAAGTCTCTTCGGCGCGAATCAGTTCATCTTTCCCTGATGGGGGTGGACACGGTGGCTTAGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 204.6 ± 48.4 nM, 204,6 |
https://pubmed.ncbi.nlm.nih.gov/19284310/ | ssRNA | WT-15 | Serine protease inhibitor plasminogen activator inhibitor-1 (PAI-1) | GGGAGGACGAUGCGGAUCAACUCACCGUAGGUCUAGUGAGAACUUCAAGUCUACUCAGACGACUCGCUGAGGAUCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 177 pM, 0,177 |
https://pubmed.ncbi.nlm.nih.gov/19284310/ | ssRNA | SM-20 | Serine protease inhibitor plasminogen activator inhibitor-1 (PAI-1) | GGGAGGACGAUGCGGAGCGACUGACGAUCUUGAGUAAACCGCUCAUCCACGUAGUCAGACGACUCGCUGAGGAUCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 920 pM, 0,92 |
https://pubmed.ncbi.nlm.nih.gov/19291713/ | ssDNA | BC15 | Heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) | GCAATGGTACGGTACTTCCTGTGGCGAGGTAGGTGGGGTGTGTGTGTATCCAAAAGTGCACGCTACTTTGCTAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 111.0 ± 36.9 nM, 111 |
https://pubmed.ncbi.nlm.nih.gov/25799539/ | ssDNA | BC-15 | Circulating tumor cells (CTCs) | GCAATGGTACGGTACTTCCTGTGGCGAGGTAGGTGGGGTGTGTGTGTATCCAAAAGTGCACGCTACTTTGCTAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 111.0 ± 36.9 nM, 111 |
https://pubmed.ncbi.nlm.nih.gov/20022942/ | 2'-fluoro-RNA | RNA11F7t | Factor Xa | GAGAG2FC2FC2FC2FCAG2FCGAGA2FUAA2FUA2FC2FU2FUGG2FC2FC2FC2FCG2FC2FU2FC2FU2FUidU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.1 ± 0.2 nM, 1,1 |
https://pubmed.ncbi.nlm.nih.gov/19545545/ | ssDNA | 13.56 | Immunoglobulin E (IgE)-binding epitope of Asp f 1 allergen | TACTAACGGTACAAGCTACACACCCGCCCCGCTCCATCCGCCCATCGTCACCTACCCACCTCGTGATCCCCTTCCCCCAACGTTGACCTAGAAGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd 93.62 ± 21.84 nM, 93,62 |
https://pubmed.ncbi.nlm.nih.gov/19545545/ | ssDNA | 13.63 | Immunoglobulin E (IgE)-binding epitope of Asp f 1 allergen | TACTAACGGTACAAGCTAGCCCACCAGAACACCCCGTCCCATCGACCTCCCTCCTCATATCCCTGCCCCTCTGCCTCCAACGTTGACCTAGAAGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19545545/ | ssDNA | 13.78 | Immunoglobulin E (IgE)-binding epitope of Asp f 1 allergen | TACTAACGGTACAAGCTACAAACCCCAACGCACGTACACCTGTCTCCCGCACTAGTTCCCCCTCATGACTGCCCTCCCAACGTTGACCTAGAAGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19450981/ | ssDNA | No. 8 | 8-hydroxy-2′-deoxyguanosine (8-OHdG) | TAGGGAATTCGTCGACGGATCCCCCCTATAGTGAGTCGTATTAAATCCATATGACTAGTAGATCCTCTAGAGTCGACCTCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19450981/ | ssDNA | No. 11 | 8-hydroxy-2′-deoxyguanosine (8-OHdG) | TAGGGAATTCGTCGACGGATCCGCGTCGACCTGCAGACCCCCATATCATCAGTCCCACCCCCAGGCACAGAGCGCCGTACCCCCCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19450981/ | ssDNA | No. 22 | 8-hydroxy-2′-deoxyguanosine (8-OHdG) | TAGGGAATTCGTCGACGGATCCGCGGGCGATCGGCGGGGGGTGCGTGCGCTCTGTGCCAGGGGGTGGGACAGATCATATGGGGGTGCTCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.1 μmol/L, 1000 |
https://pubmed.ncbi.nlm.nih.gov/20000526/ | ssDNA | Ars-3 | Arsenate [(As(V)] | GGTAATACGACTCACTATAGGGAGATACCAGCTTATTCAATTTTACAGAACAACCAACGTCGTCTCCGGGTACTTCTTCATCGAGATAGTAAGTGCAATCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 4.95± 0.31 nM, 4,95 |
https://pubmed.ncbi.nlm.nih.gov/20000526/ | ssDNA | Ars-3 | Arsenite [As(III)] | GGTAATACGACTCACTATAGGGAGATACCAGCTTATTCAATTTTACAGAACAACCAACGTCGTCTCCGGGTACTTCTTCATCGAGATAGTAAGTGCAATCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 7.05 ± 0.91 nM , 7,05 |
https://pubmed.ncbi.nlm.nih.gov/19693540/ | 2'-fluoro-RNA | b02 | Plasmodium falciparum (P. falciparum) erythrocyte membrane protein 1 (PfEMP1) | CGACUGCAGAGCUUGCUACGUAGCUCACCACACCAGCAAUCAACGCGUUUUUUCAAACACUGGCACAUGAGGUACCGAGCUCGAAUUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19693540/ | 2'-fluoro-RNA | d12 | Plasmodium falciparum (P. falciparum) erythrocyte membrane protein 1 (PfEMP1) | CGACUGCAGAGCUUGCUACGAACAAUACGACUACACCAUCAAAAGUAUUAUCUUGCAUCGAAGGUUGGCAGGUACCGAGCUCGAAUUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19693540/ | 2'-fluoro-RNA | e05 | Plasmodium falciparum (P. falciparum) erythrocyte membrane protein 1 (PfEMP1) | CGACUGCAGAGCUUGCUACGGUGACCACGCGGAUAAAUGAAUCAAAAACAACAACCAGGGCCGUUCGACUACGCUAAUUAUCCCGGGUACCGAGCUCGAAUUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/19684916/ | ssRNA | aptamer 1 | SARS-CoV nucleocapsid (N) protein | GGGAGAGCGGAAGCGUGCUGGGCCUGUCGUUCGCUGUCUUGCUACGUUACGUUACACGGUUGGCAUAACCCAGAGGUCGAUGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.65 ± 0.41 nM, 1,65 |
https://pubmed.ncbi.nlm.nih.gov/19604698/ | ssDNA | D10/DA24 | Diclofenac (DCF) | ATACCAGCTTATTCAATTACACACCGAGACCGCACTTGTACTCCCTAGCCGCCTCCGTAGATAGTAAGTGCAATCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 100.64 nM, 100,64 |
https://pubmed.ncbi.nlm.nih.gov/19604698/ | ssDNA | D22 | Diclofenac (DCF) | ATACCAGCTTATTCAATTGGCAGTAGGTGTACATGCAAAGCCAGTGTGGGTCCCTGTGTAGATAGTAAGTGCAATCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 166.34 nM, 166,34 |
https://pubmed.ncbi.nlm.nih.gov/19604698/ | ssDNA | D16 | Diclofenac (DCF) | ATACCAGCTTATTCAATTGCCCGGCAACAGGTTGTGACATGCCAGTGCGAGACCGCCCGAGATAGTAAGTGCAATCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 148.73 nM, 148,73 |
https://pubmed.ncbi.nlm.nih.gov/19604698/ | ssDNA | D3 | Diclofenac (DCF) | ATACCAGCTTATTCAATTGCAACGTGGCGGTCAGTCAGCGGGTGGTGGGTTCGGTCCAGATAGTAAGTGCAATCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 42.7 nM, 42,7 |
https://pubmed.ncbi.nlm.nih.gov/19352549/ | ssDNA | Aptamer 32, 34 | Streptavidin | TAATACGACTCACTATAGCAATGGTACGGTACTTCCTATAACGCCCGTGTTGCTCGGTTATCAAAAGTGCACGCTACTTTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 69.277 ± 4.323 nM, 69,277 |
https://pubmed.ncbi.nlm.nih.gov/19352549/ | ssDNA | Aptamer 29 | Streptavidin | TAATACGACTCACTATAGCAATGGTACGGTACTTCCAGATACGCtCGTGTTGCTCGATAGCCAAAAGTGCACGCTACTTTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 94.228 ± 5.443 nM, 94,228 |
https://pubmed.ncbi.nlm.nih.gov/19352549/ | ssDNA | Aptamer 30 | Streptavidin | TAATACGACTCACTATAGCAATGGTACGGTACTTCCCGACGCACCGATCGCAGGTTCGGGACAAAAGTGCACGCTACTTTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 104.265 ± 5.688 nM, 104,265 |
https://pubmed.ncbi.nlm.nih.gov/20624933/ | ssDNA | MT32 | Virus coat protein of two apple stem pitting virus (ASPV) isolates: MT32 and PSA‐H | AGCCTCGTCTGTTCTCCCGGGGTGGTGGGTTCTTTTTGTGGTATTGGTGTGGGGGGCAGGGAAGACAAGCAGACGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 55 nM for MT32 protein & 83 nM for PSA‐H protein, both via SPR, 55 |
https://pubmed.ncbi.nlm.nih.gov/20624933/ | ssDNA | PSA‐H | Virus coat protein of two apple stem pitting virus (ASPV) isolates: MT32 and PSA‐H | AGCCTCGTCTGTTCTCCCAGCAAGGTTTGGTGTTGGTTGGTTGCTGGTTTTGGTTTCGGGAAGACAAGCAGACGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 8.0 nM for PSA‐H protein & 290 nM for MT32 protein, both via SPR, 8 |
https://pubmed.ncbi.nlm.nih.gov/25465478/ | ssDNA | Apta 5A | 17 beta-Estradiol (17β-Estradiol) (E2） | AGCAGCACAGAGGTCAGTTCGTCCATTATTCTGGTAGCGTTGAACAACATTCAACACGCCCCTATGCGTGCTACCGTGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 27 μM, 27000 |
https://pubmed.ncbi.nlm.nih.gov/25465478/ | ssDNA | Apta 6A | 17 beta-Estradiol (17β-Estradiol) (E2） | AGCAGCACAGAGGTCAGTTCGTCGAATCAGCACCTCTGCATAGGTTACGTTTATACTGCGCCTATGCGTGCTACCGTGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 36 μM, 36000 |
https://pubmed.ncbi.nlm.nih.gov/25465478/ | ssDNA | Apta 8A | 17 beta-Estradiol (17β-Estradiol) (E2） | AGCAGCACAGAGGTCAGTTCAGCGTCCTCTGCATAGTGATTTACGCTATGTGTACAGTGCCCTATGCGTGCTACCGTGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 124 μM, 124000 |
https://pubmed.ncbi.nlm.nih.gov/25465478/ | ssDNA | Apta 9A | 17 beta-Estradiol (17β-Estradiol) (E2） | AGCAGCACAGAGGTCAGTTCCATGACTCTGCATAGGTCTAATGAAACTAGTTCTTATTTACCTATGCGTGCTACCGTGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 52 μM, 52000 |
https://pubmed.ncbi.nlm.nih.gov/25465478/ | ssDNA | Apta 11A | 17 beta-Estradiol (17β-Estradiol) (E2） | AGCAGCACAGAGGTCAGTTCCAAGTCGTACGACACAGGGTAATCCTGTTTGGTAAAACGACCTATGCGTGCTACCGTGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 51 μM, 51000 |
https://pubmed.ncbi.nlm.nih.gov/25465478/ | ssDNA | Apta 13A | 17 beta-Estradiol (17β-Estradiol) (E2） | AGCAGCACAGAGGTCAGTTCTTATGTCGAACTAAATTTGGCCTGACCAAGCCGAATTTGACCTATGCGTGCTACCGTGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 63 μM, 63000 |
https://pubmed.ncbi.nlm.nih.gov/25465478/ | ssDNA | Apta 1B | 17 beta-Estradiol (17β-Estradiol) (E2） | TGTGTGTGAGACTTCGTTCCGGCGATGGGGTAGGGGGTGTGGAGGGGCCGGACGGAGGGGCAGCAAGGCATCAGAGGTAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.9 μM, 900 |
https://pubmed.ncbi.nlm.nih.gov/25465478/ | ssDNA | Apta 19B | 17 beta-Estradiol (17β-Estradiol) (E2） | TGTGTGTGAGACTTCGTTCCCCCGGTCGGTGGGGTAGGGGGCGTGGAGTCACCGGGGGGGCAGCAAGGCATCAGAGGTAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 6 μM, 6000 |
https://pubmed.ncbi.nlm.nih.gov/20809562/ | ssRNA | Apt10L | Sulforhodamine analogue (ASR) fluorogen | GAAGCUUGGGAAUUCGAGCUCCUGACAGCAGGACCCUCACCUCGGUGAUGAUGGAGGGGCGCAAGGUUAACCGCCUCAGGGUCCUCGAUUCGAAGACGUCCAGCUGAUCUAGAUUCUAUAGUGUCACCUAAAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 39.1 ± 7.6 μM (if purified with a G-25 column without denaturing and renaturing subsequent to in vitro transcription), 3.5 ± 1.5 μM (if purified using 6% polyacrylamide-7M urea gel) , 39100 |
https://pubmed.ncbi.nlm.nih.gov/20809562/ | ssRNA | Apt10T3 (88mer) | Sulforhodamine analogue (ASR) fluorogen | GGACAGCAGGACCCUCACCUCGGUGAUGAUGGAGGGGCGCAAGGUUAACCGCCUCAGGGUCCUCGACUCGAAGACGUCCAGCUGAUCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 26.9 ± 2.2 uM, 26900 |
https://pubmed.ncbi.nlm.nih.gov/20971648/ | ssDNA | aptamer 807 | Recombinant human erythropoietin-alpha (rHuEPO-α) | CTTCTGCCCGCCTCCTTCCGATTGAAAGGTCTGTTTTTGGGGTTGGTTTGGGTCAATAGGAGACGAGATAGGCGGACACT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 82 ± 32 nM, 82 |
https://pubmed.ncbi.nlm.nih.gov/20572251/ | ssRNA | C13 | Protein tyrosine phosphatase 1B (PTP1B) | GGGAAUGGAUCCACAUCUACUGUGAUCAAUUUGGCAAUCCGCCACACGAGACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 200 pM, nan |
https://pubmed.ncbi.nlm.nih.gov/20572251/ | ssRNA | C13M21 | Protein tyrosine phosphatase 1B (PTP1B) | mGAAUUCUGUGAUCAAUUUGGCAAUCCGCCACACGAGUmUsC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 166 nM and 168 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/20572251/ | ssRNA | C9 | Protein tyrosine phosphatase 1B (PTP1B) | GGGAAUGGAUCCACAUCUACUGUGAUUAAUUUGGCAAUCCGCCACACUAGACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 250 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/21067135/ | ssDNA | selected aptamer | Immunoglobulin G (IgG) Fc fragment, Mouse | CCACTCCTCCACCTTTGACATGTGTCTGCGGCGTTTTATCATTGGCTACAGCAACAGGGTTAATACGACTCACTATAGCAATGGTACGGTACTTCCAAGCTAACCCTCATCTGCGCGCTCCCAAAAGTGCACGCTACTTTGCTAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Reported through qualitiative analysis, nan |
https://pubmed.ncbi.nlm.nih.gov/20729797/ | ssRNA | C1 | Sphingosylphosphorylcholine (SPC) | GGGAAUGGAUCCACAUCUACGAAUUCUACCGUUAUUGGUGUCACCGAAGAUGUUAUUCACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 20.9 ± 0.19 nM, 20,9 |
https://pubmed.ncbi.nlm.nih.gov/20729797/ | ssRNA | C2 | Sphingosylphosphorylcholine (SPC) | GGGAAUGGAUCCACAUCUACGAAUUCUUCCGUUAUUGGAGCCAAGUCGUAUCCCGAUUCACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 33.2 ± 0.19 nM, 33,2 |
https://pubmed.ncbi.nlm.nih.gov/20729797/ | ssRNA | C8 | Sphingosylphosphorylcholine (SPC) | GGAAUGGAUCCACAUCUACGAAUUCGCAUUGUCCGCACGCAAAGCAUUAUUGUGAUUCACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 90.4 ± 2.35 nM, 90,4 |
https://pubmed.ncbi.nlm.nih.gov/20729797/ | ssRNA | m009 | Sphingosylphosphorylcholine (SPC) | GGGAUCCACAUCUACGAAUUCUACCGUUAUUGGUGUCACCGAAGAUGUUAUUCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 186 ± 5.05 nM, 186 |
https://pubmed.ncbi.nlm.nih.gov/20729797/ | ssRNA | m010 | Sphingosylphosphorylcholine (SPC) | GGAUCUACGAAUUCUACCGUUAUUGGUGUCACCGAAGAUCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 252 ± 7.04 nM, 252 |
https://pubmed.ncbi.nlm.nih.gov/20729797/ | ssRNA | m011 | Sphingosylphosphorylcholine (SPC) | GGGAUCCACAUCUACGAAUUCUUCCGUUAUUGGAGCCAAGUCGUAUCCCGAUUCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 221 ± 4.84 nM, 221 |
https://pubmed.ncbi.nlm.nih.gov/20729797/ | ssRNA | m012 | Sphingosylphosphorylcholine (SPC) | GGCGAAUUCUUCCGUUAUUGGAGCCAAGUCGCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 196 ± 2.98 nM, 196 |
https://pubmed.ncbi.nlm.nih.gov/20452328/ | 2'-fluoro-RNA | S132B-C22 | Light chain of type A botulinum neurotoxin (BoNT/A) (LCA) | GGGAGGAGGAGAGAUGUGAACUUGACAGCGUGCCUAGAAGUCCAAGCUUAAAUAACCACGCUCGACAAGCAGAAACUCUACACUGGACUGGCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 87 ± 20 nM, 87 |
https://pubmed.ncbi.nlm.nih.gov/20452328/ | 2'-fluoro-RNA | S132B-C12 | Light chain of type A botulinum neurotoxin (BoNT/A) (LCA) | GGGAGGAGGAGAGAUGUGAACUUACAACCCGGAACAACGUCUAACAGUGUACCAUAACCCGGCAUUCAAGAAACUCUACACUGGACUGGCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 111 ± 21 nM, 111 |
https://pubmed.ncbi.nlm.nih.gov/20452328/ | 2'-fluoro-RNA | S132B-C11 | Light chain of type A botulinum neurotoxin (BoNT/A) (LCA) | GGGAGGAGGAGAGAUGUGAACUUAUUCGGGCCCAGGAACCAACUAUAUAAAUGUCCCGAAUGCUUCGACGAGAAACUCUACACUGGACUGGCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 186 ± 18 nM, 186 |
https://pubmed.ncbi.nlm.nih.gov/20110884/ | ssDNA | Vap7 | Receptor-binding domain (RBD) of vascular endothelial growth factor 121 (VEGF121) | ATACCAGTCTATTCAATTGCACTCTGTGGGGGTGGACGGGCCGGGTAGATAGTATGTGCAATCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.0 nM, 1 |
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