reference stringlengths 7 774 ⌀ | aptamer_chemistry stringclasses 21
values | aptamer_name stringlengths 1 164 | target_name stringlengths 2 1.2k ⌀ | aptamer_sequence stringlengths 2 380 | origin stringclasses 6
values | target_chemistry stringclasses 11
values | external_id stringclasses 509
values | target_sequence stringclasses 357
values | new_affinity stringlengths 3 193 ⌀ |
|---|---|---|---|---|---|---|---|---|---|
null | null | 21412566-BHQ1-3 | Black Hole Quenchers | acguagucccuagauaaauucggagagagugaugugguagaauacguuggcuuuuguuu | https://github.com/micheldumontier/aptamerbase | null | null | null | 5.1000000000000005 |
null | null | 21412566-BHQ1-4 | Black Hole Quenchers | uuuauguccagcccuagauaaagucggagcuugguuccugugcacucagcgaaaguauua | https://github.com/micheldumontier/aptamerbase | null | null | null | 16.799999999999997 |
20335968.0 | null | 20335968-egg white lysozyme-1 | egg white lysozyme | GCAGCTAAGCAGGCGGCTCACAAAACCATTCGCATGCGGC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0061 |
null | null | 12692304-Ang2-1 | angiopoietin 2 | ACUAGCCUCAUCAGCUCAUGUGCCCCUCCGCCUGGAUCAC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0031 |
null | null | 10449422-yeast phenylalanine tRNA-2 | yeast phenylalanine tRNA | AAGCCUGUCGUGUGAACCUUGGUAGUCUUCAGAUACCAUUCUAGCCACGAGAGACUACGACACUGCUCCGUCGCCC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.026000000000000002 |
null | null | 12890540-PACs-4 | peptide-acridine conjugates (PACs) | ACAGUGGGCGUCGGCUUCAACCGCGAAUUC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 20071745-MBNL1-8 | Muscleblind-like 1 protein (MBNL1) | Gggaaauggauccacaucuacgaauccuguuccucgcuuuucgccuccgcuuccgccgcaagacucgauacgugacgaacc | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 20071745-MBNL1-9 | Muscleblind-like 1 protein (MBNL1) | Gggaaauggauccacaucuacgaauccccugcuucgcuucugcauuguucggccgguugaagacucgauacgugacgaacc | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 20071745-MBNL1-10 | Muscleblind-like 1 protein (MBNL1) | Gggaaauggauccacaucuacgaauccccgaucccgcuuaugccauccgcugcagucacaagacucgauacgugacgaacc | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.01 |
17030508.0 | null | 17030508-Bovine factor IX-1 | 17030508-Bovine factor IX-Ma-1 | GGGAGCUCAGCCUUCACUGCCUACGCGGGCGUUUACGUAACGGCUUAUGGGGAGCUGAGCGCUUGAUCGUGGUAGUGCGAAGCCAGUAAACGAGGGCACCACGGUCGGAUCCAC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.01 |
16893958.0 | null | 16893958-MBP-fused drosophila HSF-1 | 16893958-MBP-fused drosophila HSF-1 | GGGAGAAUUCAACUGCCAUCUAGGCAUCGCGAUACAAAAUUAAGUUGAACGCGAGUUCUCCAUCUAGUACUACAAGCUUCUGGACUCGAU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
17000903.0 | null | 17000903-dsRBD 2 of xlADAR1-1 | dsRBD 2 of xlADAR1 | GGAGCUCAGCCUUCACUGCUGAGAAGACGAUCGUGAUGCGACUCGAGGAGUCCUAGUGUCACUGGAACUAACCUUUUCGUUCCAUUGGUCCGCGGCACCACGGUCGGAUCC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-Ma-1 | null | GAGGACGAUGCGGACUAGCCUCAUCAGCUCAUGUGCCCCUC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 10449422-yeast phenylalanine tRNA-Ma-1 | null | GGGUGGUAGUCUUCAGAUACCA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 19520059-His-tag-Ma-2 | null | GGGUAUAUUGGCGCCUUCGUGGAAUGUCAGUGCCUGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 19520059-His-tag-Ma-1 | null | ggguacgcucagguauauuggcgccuucguggaaugucagugccuggacgugcagu | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 20071745-MBNL1-Ma-1 | null | uguuccucgcuuuucgccuccgcuuccgccgc | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 20071745-MBNL1-Ma-2 | null | ccugcuucgcuucugcauuguucggccgguug | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 20071745-MBNL1-Ma-3 | null | ccgaucccgcuuaugccauccgcugcagucac | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 18557632-Mbl-Ma-2 | null | GGGGCGGUAGAGUCUUUCACUGCAGACUUGACGAAGCUU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 18557632-Mbl-Ma-3 | null | Gggauccacaucuacgaauucaccguagaugauggaugugcgguagagucuuucacugcagacuugacgaagcuu | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 17030508-Bovine factor IX-Ma-1 | null | GGGAUCGUGGUAGUGCGAAGCCAGUAAACGAGGGCACCACGGUCC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 16893958-MBP-fused drosophila HSF-Ma-1 | null | AUUCAACUGCGCAUCGCGAUACAAAAUUAAGUUGAACGCGAGU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 17000903-dsRBD 2 of xlADAR1-Ma-1 | null | UCGUGAUGCGACUCGAGGAGUCCUAGUGUCACUGGAACUAACCUUUUCGUUCCAUUGGUCCGCGGCACCACGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12954786-TTF1-1 | thyroid transcription factor 1 | TCAAAAGGGGTGATTGCTTGCACAATGACAGGGTAGGACA | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.00336 |
null | null | 12954786-TTF1-4 | null | TTATGGGGATGAAAGTGGTGTTCGGGTTCGCCACTTCCAC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12954786-TTF1-2 | thyroid transcription factor 1 | GATACACGGGCGGAGGAGGTGGGGGGGGGTAGGTGGGTAT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12954786-TTF1-5 | null | TTGGGGTGGGAGGGCGGGTTAACAAAGATAGCGCAACAGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12954786-TTF1-3 | thyroid transcription factor 1 | TGGCTAGTGGGTAAGGGGCGGGAGGGTGACAGGGCGATCC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0325 |
null | null | 12692304-Ang2-10 | null | UAAGCUCUUUGGCUUAGCCCGACACGUUGAACUCCAGAGU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-13 | null | CACUCAGCGCCCUGCGAAACGUUGCCGCCUCCCAACGUCU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-12 | null | CAUGUCUACAACAAUCUCGCCCGUUGAGUCUCGUCGAAUU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-11 | null | CACGGUACCACCAAGUCACACGUUGAACUCCAUGCAGCUG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-3 | angiopoietin 2 | CACCAGACCGACAUCAGCUUAUGGCCCCUCACCCACACCG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-14 | null | CUCUUUUUGUCCCCGCACGUUGAACUCCUGUCCCUCUACU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-7 | null | ACUCACCAGUCACCAUCAGCUCAUGCGCCCCUCCCCCGAC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-9 | null | GGAGCGCAAUUCGCCUCGCAAGUUGAACUCCGCUGGCGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-6 | null | CACUACCACGCCAUAUCAGCUAAUGGCCCCUCCCUACGCA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-2 | angiopoietin 2 | UUAACCAUCAGCUCAUGGCCCCUGCCCUCUCAAGGACCAC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0021999999999999997 |
null | null | 12692304-Ang2-5 | null | CCAGACGUUCUCGCCCCGCCGAUCAUCAGCGCUGGCCCUAU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-4 | null | CCACCGAUCGCAUCAGCUCAUGGCCCCUCCCGACCCGCCA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12692304-Ang2-8 | null | UGACCAAGCCUCACGUUGAACCUGCCAGUAGACCCCGCCCA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-10 | null | GCTGGGGTGTTGGGTGTGGGGGTGA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-15 | null | TGGGTAGGTTCGAGGGGTGGGTGTG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-8 | null | AGGGGGGTTCGGCGGAGGTATCAG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-5 | null | GGGAGGTTGGGGTATCAGGGGGGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-11 | null | TGAGGGTCTAGGGTGGTGGGGTGGA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-14 | null | AGTCAGACAGGGGGGAGGATCCGT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-19 | null | GTGGACGCAGACTCAGCCGGATTGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-21 | null | GGGGGGGGATTTGGAGGTGTAGGT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-7 | null | GGGTGTGGGAGGTGATGGGGTAGGT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-4 | null | TATGGGGGTGGGTCAGGTTTCGGTA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-20 | null | GTGGAAGCCTCCTAAGCCGGTGTGT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-17 | null | GGTTGGATGTAAGGTTGGAGGGGGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-13 | null | GAGGAGGGAGAATAGGGGTGGGTGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
12668310.0 | null | 12668310-PC12-1 | PC12 cell line | TGGTTGGGGATAGAGGTGGGTGTTT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-9 | null | AGTGGGGGTAGGGGATAGGGTAGGC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-12 | null | GTGCGACATAGCTAAACCGGTTCGT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-16 | null | AGAGTGGGGGGGATGTAGGTGGGTT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-2 | null | TGAGGGTCTAGGGTGGTGGGGTGGA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-6 | null | AGGGGGGTTCGGCGGAGGTATCAG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-23 | null | GGGTGTGAGAGGTTGAGGGGGTTCG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-22 | null | TGGGTGAGTTCAATGGGGGTATGT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-18 | null | GTGTCCGTGGACTAAACCGGCCTGT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12668310-PC12-3 | null | TGATGGATGTGGGGATGCGGGGGCG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
9310370.0 | null | 9310370-NS3-1 | NS3 protein of hepatitis C virus | GGGAACUCGAUGAAGCGAAUUCUGUUGGCGAACUGUACGCAAGUACACUGGAUGACAGGCCUAUCUAUCGGAUCCACG | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.65 |
null | null | 1379730-HIV-1-RT-2 | null | GAAUAUCUUCCGAAGCCGAACGGGAAAACCGGCAUCU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
12927206.0 | null | 12927206-GST-FMRP-1 | fragile X mental retardation protein | UUUUUUUAAUUUUUGUUUAUUAAUCUUUAUGCUUUUUUCAUUUAUCUAUAAUUUUUAUU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
9184141.0 | null | 9184141-CCdApPuro-1 | 9184141-CCdApPuro-1 | gggagaggauacuacacguguacgaacuuacaggagcucuauccacuggaaauaacaggacccugcaaccccauugcauguagcagaagcuucc | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 9184141-CCdApPuro-2 | CCdApPuro | gggagaggauacuacacgugcgaggcauaacacugucuggcacgggaaauaacaggaccccacaauacccccauugcauguagcagaagcuuccg | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
11565747.0 | null | 11565747-KHO-3-1 | KHO-3 | UUUAAGUAUAGGUUAAGAAAAUAUAUAAU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 11565747-KHO-3-2 | KHO-3 | CGAGACUUUUGCUUUUCUUGCGUCUUUU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
11565747.0 | null | 11565747-KHO-3-3 | KHO-3 | UUUAAGCAUAGGUCAAGAAAAUAUAUAUAAU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
12890540.0 | null | 12890540-PACs-1 | 12890540-PACs-1 | GAGCAUGUACGUGCGGUAUGCCGAUUAUGC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
12890540.0 | null | 12890540-PACs-2 | peptide-acridine conjugates (PACs) | AAUGGCAUCUCGUCCUUAUUGGCGCAGUGA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 12890540-PACs-3 | peptide-acridine conjugates (PACs) | GUGUCGUCGUGUGAUCGUAACCGUACGCAU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7542922-HIV-1-RT-4 | HIV-1-RT | AGCCAGTCAAGTTAATGGGTGCCATGCAGAAGCA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7542922-HIV-1-RT-5 | HIV-1-RT | TATTTGCCCTTGCAGGCCGCAGGAGTGCTAGCAGT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7542922-HIV-1-RT-6 | HIV-1-RT | CGTATAGGTCCCCTGCCGCTAAACAGCGCCGCGGTA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7542922-HIV-1-RT-7 | HIV-1-RT | TACGTGAGCGTGCTGTCCCCTAAAGGTGATACGTC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7542922-HIV-1-RT-8 | HIV-1-RT | AAGCTCTTAGTTGATGCGCGGTCAAAATTTAAGCT | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
7542922.0 | null | 7542922-HIV-1-RT-1 | HIV-1-RT | CAGAAGGATAAACTGTCCAGAACTTGGAATATATC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7542922-HIV-1-RT-2 | HIV-1-RT | TTAGCAAAGTTGAAGCCGGACTAACAAGCTCTACG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7542922-HIV-1-RT-3 | HIV-1-RT | CAGGCGTTAGGGAAGGGCGTCGAAAGCAGGGTGGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
1651877.0 | null | 16518777A-Ricin-1 | Ricin | CCGTAGGTTCGGGGTCGGAGTGGTCCGGAAGGTGGCGTGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 16518777A-Ricin-2 | Ricin | GCAGCAGGGAGAGTTGTGTGAGGGAAGTGGTCGGTAGGTG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 16518777A-Ricin-3 | Ricin | TGGGGGTCGGGATACGGTCAGTGGTGGTGAGTGGTAACGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 16518777A-Ricin-4 | Ricin | GGGGGAGGACGCGTAGTGGGGGGCCCATGGTTGTGTGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
1651877.0 | null | 16518777B-Ricin-1 | Ricin | CCGTAGGTTCGGGGTCGGAGTGGTCCGGAAGATGGCGTGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 1651877B-Ricin-2 | null | CCGTAGGTTCGGGGCGGAGTGGTCCGGAAGGTGGCGTGG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 16518777B-Ricin-3 | Ricin | GGAGGCGCGATGTAGGTATGTGAGGGCGGCGCGGTGGGCG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7678562-E.Coli rho factor-23 | null | AGCAAGGGCCACUGCAAAGCACGCGAGCAU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7678562-E.Coli rho factor-24 | null | CACCGCAUUGAGCCCAGAGACGCCACAGAC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
7678562.0 | null | 7678562-E.Coli rho factor-1 | 7678562-E.Coli rho factor-2 | CCUGCCCUUUCCAACACCCGCCGAAACUCA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7678562-E.Coli rho factor-12 | null | AACAUAUCCCCAGCCAUGCAACGUGGCGAA | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7678562-E.Coli rho factor-4 | E.Coli rho factor | AAAACCUACAACACACCCCUCAACUUUCCC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7678562-E.Coli rho factor-3 | E.Coli rho factor | CGAAAGUCUCACUUCCUAAUCCCCUUCUUC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7678562-E.Coli rho factor-5 | E.Coli rho factor | ACCCACCUACACCCCUCACCACACUACCAC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7678562-E.Coli rho factor-6 | 7678562-E.Coli rho factor-23 | GCCCUCCAACCACACCCCGCCAACAACCCC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 7678562-E.Coli rho factor-13 | null | AGAAAAAAACAAUCCACAGAACAGCGCGUG | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
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