diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/logs/inference/results/scoring.log b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/logs/inference/results/scoring.log
new file mode 100644
index 0000000000000000000000000000000000000000..df8d2520de4e88db63e16749dd0863d58c02db57
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/logs/inference/results/scoring.log
@@ -0,0 +1,1148 @@
+WARNING:root:Invoking DockQ as script rather than binary. This will slow down computations.
+
  0%|          | 0/322 [00:00<?, ?it/s]
  0%|          | 1/322 [00:02<11:34,  2.16s/it]
  1%|          | 2/322 [00:02<06:18,  1.18s/it]
  1%|          | 3/322 [00:02<04:05,  1.30it/s]
  1%|          | 4/322 [00:03<03:40,  1.44it/s]
  2%|▏         | 6/322 [00:03<02:00,  2.62it/s]
  2%|▏         | 7/322 [00:03<01:37,  3.25it/s]
  2%|▏         | 8/322 [00:04<01:28,  3.53it/s]
  3%|▎         | 9/322 [00:05<02:41,  1.94it/s]
  3%|▎         | 10/322 [00:05<02:34,  2.02it/s]
  4%|▍         | 13/322 [00:06<02:06,  2.44it/s]
  5%|▍         | 15/322 [00:07<02:20,  2.18it/s]
  5%|▍         | 16/322 [00:09<03:14,  1.57it/s]
  5%|▌         | 17/322 [00:09<02:57,  1.72it/s]
  6%|▌         | 19/322 [00:09<02:06,  2.40it/s]
  7%|▋         | 21/322 [00:10<01:52,  2.69it/s]
  7%|▋         | 22/322 [00:10<01:59,  2.50it/s]
  7%|▋         | 23/322 [00:11<01:50,  2.70it/s]
  7%|▋         | 24/322 [00:11<02:14,  2.22it/s]
  8%|▊         | 25/322 [00:12<02:16,  2.18it/s]
  8%|▊         | 27/322 [00:12<01:29,  3.30it/s]
  9%|▊         | 28/322 [00:12<01:40,  2.93it/s]
  9%|▉         | 29/322 [00:14<02:51,  1.71it/s]
 11%|█         | 34/322 [00:16<02:07,  2.25it/s]
 11%|█         | 35/322 [00:16<02:15,  2.11it/s]
 11%|█         | 36/322 [00:17<02:47,  1.70it/s]
 11%|█▏        | 37/322 [00:18<02:44,  1.73it/s]
 12%|█▏        | 39/322 [00:18<02:04,  2.27it/s]
 13%|█▎        | 41/322 [00:19<01:36,  2.90it/s]
 13%|█▎        | 42/322 [00:19<01:41,  2.75it/s]
 14%|█▎        | 44/322 [00:20<01:38,  2.83it/s]
 14%|█▍        | 45/322 [00:20<01:42,  2.70it/s]
 14%|█▍        | 46/322 [00:21<01:53,  2.42it/s]
 15%|█▍        | 47/322 [00:21<01:41,  2.71it/s]
 15%|█▍        | 48/322 [00:23<03:08,  1.45it/s]
 16%|█▌        | 50/322 [00:23<02:07,  2.13it/s]
 16%|█▌        | 51/322 [00:24<02:58,  1.52it/s]
 16%|█▌        | 52/322 [00:26<04:22,  1.03it/s]
 16%|█▋        | 53/322 [00:28<05:30,  1.23s/it]
 17%|█▋        | 55/322 [00:28<03:21,  1.33it/s]
 17%|█▋        | 56/322 [00:29<03:05,  1.43it/s]
 18%|█▊        | 57/322 [00:29<03:01,  1.46it/s]
 18%|█▊        | 58/322 [00:30<03:10,  1.38it/s]
 18%|█▊        | 59/322 [00:31<03:14,  1.35it/s]
 19%|█▉        | 61/322 [00:32<02:32,  1.71it/s]
 19%|█▉        | 62/322 [00:32<02:32,  1.70it/s]
 20%|█▉        | 63/322 [00:33<02:11,  1.97it/s]
 20%|██        | 65/322 [00:33<01:21,  3.14it/s]
 20%|██        | 66/322 [00:34<01:45,  2.42it/s]
 21%|██        | 68/322 [00:34<01:15,  3.37it/s]
 21%|██▏       | 69/322 [00:34<01:07,  3.74it/s]
 22%|██▏       | 70/322 [00:35<01:23,  3.01it/s]
 22%|██▏       | 71/322 [00:36<02:32,  1.65it/s]
 22%|██▏       | 72/322 [00:37<03:00,  1.39it/s]
 23%|██▎       | 73/322 [00:37<02:46,  1.49it/s]
 23%|██▎       | 74/322 [00:39<03:39,  1.13it/s]
 23%|██▎       | 75/322 [00:40<03:21,  1.23it/s]
 24%|██▎       | 76/322 [00:40<02:46,  1.48it/s]
 24%|██▍       | 77/322 [00:41<03:44,  1.09it/s]
 25%|██▍       | 79/322 [00:43<03:31,  1.15it/s]
 25%|██▌       | 81/322 [00:44<02:42,  1.49it/s]
 26%|██▌       | 83/322 [00:45<02:27,  1.62it/s]
 26%|██▌       | 84/322 [00:45<02:18,  1.72it/s]
 26%|██▋       | 85/322 [00:46<02:14,  1.77it/s]
 27%|██▋       | 86/322 [00:46<01:49,  2.15it/s]
 27%|██▋       | 87/322 [00:47<02:50,  1.38it/s]
 28%|██▊       | 89/322 [00:48<01:53,  2.05it/s]
 28%|██▊       | 90/322 [00:48<01:44,  2.22it/s]
 29%|██▊       | 92/322 [00:49<02:05,  1.83it/s]
 29%|██▉       | 94/322 [00:50<01:27,  2.60it/s]
 30%|██▉       | 95/322 [00:51<02:35,  1.46it/s]
 30%|██▉       | 96/322 [00:52<02:27,  1.53it/s]
 30%|███       | 98/322 [00:52<01:42,  2.18it/s]
 31%|███       | 100/322 [00:53<01:37,  2.28it/s]
 31%|███▏      | 101/322 [00:53<01:24,  2.60it/s]
 32%|███▏      | 102/322 [00:54<01:33,  2.36it/s]
 32%|███▏      | 103/322 [00:54<01:42,  2.14it/s]
 33%|███▎      | 105/322 [00:57<02:53,  1.25it/s]
 33%|███▎      | 106/322 [00:59<03:37,  1.01s/it]
 33%|███▎      | 107/322 [01:00<04:07,  1.15s/it]
 34%|███▎      | 108/322 [01:02<04:23,  1.23s/it]
 34%|███▍      | 109/322 [01:02<03:33,  1.00s/it]
 34%|███▍      | 110/322 [01:03<03:35,  1.02s/it]
 34%|███▍      | 111/322 [01:04<02:54,  1.21it/s]
 35%|███▍      | 112/322 [01:04<02:52,  1.22it/s]
 35%|███▌      | 113/322 [01:05<02:49,  1.23it/s]
 35%|███▌      | 114/322 [01:07<04:19,  1.25s/it]
 36%|███▌      | 115/322 [01:08<03:15,  1.06it/s]
 36%|███▌      | 116/322 [01:08<02:33,  1.34it/s]
 36%|███▋      | 117/322 [01:09<02:21,  1.45it/s]
 37%|███▋      | 118/322 [01:09<02:14,  1.52it/s]
 37%|███▋      | 119/322 [01:10<01:59,  1.69it/s]
 38%|███▊      | 121/322 [01:10<01:21,  2.46it/s]
 38%|███▊      | 122/322 [01:10<01:17,  2.58it/s]
 38%|███▊      | 123/322 [01:11<01:29,  2.21it/s]
 39%|███▊      | 124/322 [01:11<01:19,  2.49it/s]
 39%|███▉      | 125/322 [01:12<01:24,  2.33it/s]
 39%|███▉      | 126/322 [01:12<01:22,  2.38it/s]
 39%|███▉      | 127/322 [01:14<02:25,  1.34it/s]
 40%|███▉      | 128/322 [01:14<01:54,  1.70it/s]
 40%|████      | 129/322 [01:15<02:04,  1.55it/s]
 40%|████      | 130/322 [01:15<01:56,  1.65it/s]
 41%|████      | 131/322 [01:16<02:28,  1.28it/s]
 41%|████      | 132/322 [01:17<02:09,  1.46it/s]
 41%|████▏     | 133/322 [01:17<01:58,  1.59it/s]
 42%|████▏     | 135/322 [01:18<01:21,  2.31it/s]
 42%|████▏     | 136/322 [01:18<01:12,  2.55it/s]
 43%|████▎     | 137/322 [01:18<01:20,  2.29it/s]
 43%|████▎     | 138/322 [01:19<01:32,  1.99it/s]
 43%|████▎     | 139/322 [01:20<01:43,  1.77it/s]
 43%|████▎     | 140/322 [01:20<01:44,  1.75it/s]
 44%|████▍     | 141/322 [01:21<01:44,  1.73it/s]
 45%|████▍     | 144/322 [01:21<00:58,  3.05it/s]
 45%|████▌     | 145/322 [01:22<01:11,  2.48it/s]
 46%|████▌     | 147/322 [01:23<01:08,  2.57it/s]
 46%|████▋     | 149/322 [01:23<00:58,  2.93it/s]
 47%|████▋     | 150/322 [01:24<00:53,  3.21it/s]
 47%|████▋     | 151/322 [01:24<00:47,  3.62it/s]
 47%|████▋     | 152/322 [01:24<00:57,  2.94it/s]
 48%|████▊     | 153/322 [01:25<01:31,  1.85it/s]
 48%|████▊     | 154/322 [01:26<01:37,  1.73it/s]
 48%|████▊     | 155/322 [01:27<01:33,  1.78it/s]
 48%|████▊     | 156/322 [01:28<02:27,  1.13it/s]
 49%|████▉     | 157/322 [01:29<02:37,  1.05it/s]
 49%|████▉     | 158/322 [01:31<03:21,  1.23s/it]
 49%|████▉     | 159/322 [01:34<04:14,  1.56s/it]
 50%|████▉     | 160/322 [01:34<03:11,  1.18s/it]
 50%|█████     | 161/322 [01:34<02:23,  1.12it/s]
 50%|█████     | 162/322 [01:35<02:36,  1.02it/s]
 51%|█████     | 163/322 [01:36<02:29,  1.06it/s]
 51%|█████     | 165/322 [01:40<03:43,  1.43s/it]
 52%|█████▏    | 166/322 [01:41<03:09,  1.21s/it]
 52%|█████▏    | 168/322 [01:43<02:51,  1.11s/it]
 52%|█████▏    | 169/322 [01:43<02:22,  1.07it/s]
 53%|█████▎    | 170/322 [01:45<03:05,  1.22s/it]
 53%|█████▎    | 171/322 [01:46<03:02,  1.21s/it]
 53%|█████▎    | 172/322 [01:48<03:14,  1.29s/it]
 54%|█████▎    | 173/322 [01:50<03:59,  1.61s/it]
 54%|█████▍    | 174/322 [01:51<03:25,  1.39s/it]
 54%|█████▍    | 175/322 [01:52<02:54,  1.19s/it]
 55%|█████▍    | 176/322 [01:52<02:10,  1.12it/s]
 55%|█████▍    | 177/322 [01:52<01:53,  1.28it/s]
 55%|█████▌    | 178/322 [01:54<02:18,  1.04it/s]
 56%|█████▌    | 179/322 [01:55<02:31,  1.06s/it]
 56%|█████▌    | 180/322 [01:57<03:05,  1.31s/it]
 56%|█████▌    | 181/322 [01:58<03:08,  1.34s/it]
 57%|█████▋    | 182/322 [02:00<02:56,  1.26s/it]
 57%|█████▋    | 183/322 [02:01<02:52,  1.24s/it]
 57%|█████▋    | 184/322 [02:02<02:42,  1.18s/it]
 57%|█████▋    | 185/322 [02:02<02:19,  1.02s/it]
 58%|█████▊    | 186/322 [02:03<01:51,  1.21it/s]
 58%|█████▊    | 187/322 [02:03<01:24,  1.60it/s]
 58%|█████▊    | 188/322 [02:04<01:33,  1.44it/s]
 59%|█████▊    | 189/322 [02:04<01:14,  1.79it/s]
 59%|█████▉    | 190/322 [02:05<01:24,  1.57it/s]
 59%|█████▉    | 191/322 [02:06<01:28,  1.48it/s]
 60%|█████▉    | 192/322 [02:06<01:36,  1.35it/s]
 60%|█████▉    | 193/322 [02:07<01:18,  1.64it/s]
 61%|██████    | 195/322 [02:07<00:50,  2.52it/s]
 61%|██████    | 196/322 [02:07<00:42,  2.97it/s]
 61%|██████    | 197/322 [02:08<00:59,  2.10it/s]
 61%|██████▏   | 198/322 [02:08<00:47,  2.63it/s]
 62%|██████▏   | 199/322 [02:08<00:38,  3.18it/s]
 62%|██████▏   | 200/322 [02:09<00:57,  2.12it/s]
 62%|██████▏   | 201/322 [02:10<00:53,  2.26it/s]
 63%|██████▎   | 202/322 [02:11<01:18,  1.53it/s]
 63%|██████▎   | 204/322 [02:12<01:06,  1.78it/s]
 64%|██████▎   | 205/322 [02:13<01:36,  1.21it/s]
 64%|██████▍   | 206/322 [02:14<01:20,  1.44it/s]
 64%|██████▍   | 207/322 [02:15<01:51,  1.03it/s]
 65%|██████▍   | 208/322 [02:16<01:38,  1.15it/s]
 65%|██████▍   | 209/322 [02:16<01:13,  1.53it/s]
 66%|██████▌   | 211/322 [02:17<01:08,  1.61it/s]
 66%|██████▌   | 213/322 [02:18<01:04,  1.70it/s]
 66%|██████▋   | 214/322 [02:19<01:03,  1.70it/s]
 67%|██████▋   | 215/322 [02:20<01:14,  1.44it/s]
 67%|██████▋   | 217/322 [02:20<00:49,  2.11it/s]
 68%|██████▊   | 218/322 [02:21<00:49,  2.10it/s]
 68%|██████▊   | 219/322 [02:22<01:17,  1.33it/s]
 69%|██████▊   | 221/322 [02:23<01:04,  1.56it/s]
 69%|██████▉   | 223/322 [02:25<01:02,  1.59it/s]
 70%|██████▉   | 224/322 [02:25<00:56,  1.74it/s]
 70%|██████▉   | 225/322 [02:26<00:57,  1.70it/s]
 70%|███████   | 226/322 [02:26<01:04,  1.49it/s]
 70%|███████   | 227/322 [02:27<00:55,  1.73it/s]
 71%|███████▏  | 230/322 [02:28<00:46,  1.98it/s]
 72%|███████▏  | 233/322 [02:28<00:27,  3.29it/s]
 73%|███████▎  | 234/322 [02:30<00:42,  2.07it/s]
 74%|███████▎  | 237/322 [02:30<00:27,  3.10it/s]
 74%|███████▍  | 238/322 [02:32<00:49,  1.70it/s]
 74%|███████▍  | 239/322 [02:32<00:50,  1.64it/s]
 75%|███████▍  | 240/322 [02:33<00:42,  1.93it/s]
 75%|███████▍  | 241/322 [02:33<00:38,  2.12it/s]
 75%|███████▌  | 242/322 [02:36<01:20,  1.00s/it]
 75%|███████▌  | 243/322 [02:37<01:25,  1.09s/it]
 76%|███████▌  | 244/322 [02:38<01:26,  1.11s/it]
 76%|███████▌  | 245/322 [02:38<01:04,  1.19it/s]
 76%|███████▋  | 246/322 [02:38<00:52,  1.45it/s]
 77%|███████▋  | 247/322 [02:39<00:39,  1.91it/s]
 77%|███████▋  | 248/322 [02:39<00:44,  1.65it/s]
 77%|███████▋  | 249/322 [02:42<01:16,  1.04s/it]
 78%|███████▊  | 250/322 [02:42<00:55,  1.30it/s]
 78%|███████▊  | 251/322 [02:42<00:54,  1.29it/s]
 79%|███████▊  | 253/322 [02:43<00:31,  2.19it/s]
 79%|███████▉  | 255/322 [02:43<00:30,  2.20it/s]
 80%|███████▉  | 256/322 [02:44<00:33,  1.95it/s]
 80%|███████▉  | 257/322 [02:45<00:35,  1.84it/s]
 80%|████████  | 258/322 [02:47<01:02,  1.02it/s]
 80%|████████  | 259/322 [02:48<01:01,  1.02it/s]
 81%|████████  | 260/322 [02:49<00:55,  1.11it/s]
 81%|████████  | 261/322 [02:51<01:14,  1.21s/it]
 82%|████████▏ | 263/322 [02:51<00:46,  1.28it/s]
 82%|████████▏ | 264/322 [02:52<00:38,  1.51it/s]
 82%|████████▏ | 265/322 [02:52<00:32,  1.77it/s]
 83%|████████▎ | 266/322 [02:53<00:44,  1.26it/s]
 83%|████████▎ | 267/322 [02:54<00:45,  1.21it/s]
 83%|████████▎ | 268/322 [02:55<00:41,  1.31it/s]
 84%|████████▎ | 269/322 [02:56<00:41,  1.27it/s]
 84%|████████▍ | 270/322 [02:57<00:47,  1.09it/s]
 84%|████████▍ | 271/322 [02:58<00:47,  1.07it/s]
 84%|████████▍ | 272/322 [02:58<00:39,  1.27it/s]
 85%|████████▍ | 273/322 [02:59<00:35,  1.38it/s]
 85%|████████▌ | 274/322 [02:59<00:27,  1.71it/s]
 85%|████████▌ | 275/322 [03:00<00:30,  1.56it/s]
 86%|████████▌ | 276/322 [03:01<00:30,  1.51it/s]
 86%|████████▌ | 277/322 [03:01<00:27,  1.61it/s]
 86%|████████▋ | 278/322 [03:02<00:30,  1.46it/s]
 87%|████████▋ | 279/322 [03:04<00:48,  1.12s/it]
 87%|████████▋ | 280/322 [03:04<00:35,  1.17it/s]
 87%|████████▋ | 281/322 [03:05<00:33,  1.21it/s]
 88%|████████▊ | 282/322 [03:07<00:44,  1.12s/it]
 88%|████████▊ | 284/322 [03:08<00:34,  1.11it/s]
 89%|████████▊ | 285/322 [03:09<00:37,  1.00s/it]
 89%|████████▉ | 286/322 [03:12<00:47,  1.31s/it]
 89%|████████▉ | 287/322 [03:12<00:38,  1.10s/it]
 89%|████████▉ | 288/322 [03:13<00:39,  1.15s/it]
 90%|████████▉ | 289/322 [03:14<00:33,  1.01s/it]
 90%|█████████ | 290/322 [03:17<00:50,  1.58s/it]
 90%|█████████ | 291/322 [03:19<00:55,  1.79s/it]
 91%|█████████ | 292/322 [03:20<00:39,  1.31s/it]
 91%|█████████▏| 294/322 [03:22<00:32,  1.18s/it]
 92%|█████████▏| 295/322 [03:22<00:25,  1.05it/s]
 92%|█████████▏| 296/322 [03:23<00:26,  1.03s/it]
 92%|█████████▏| 297/322 [03:24<00:24,  1.00it/s]
 93%|█████████▎| 299/322 [03:25<00:18,  1.25it/s]
 93%|█████████▎| 300/322 [03:30<00:38,  1.75s/it]
 93%|█████████▎| 301/322 [03:32<00:36,  1.74s/it]
 94%|█████████▍| 302/322 [03:35<00:45,  2.26s/it]
 94%|█████████▍| 303/322 [03:40<00:53,  2.84s/it]
 94%|█████████▍| 304/322 [03:42<00:48,  2.68s/it]
 95%|█████████▍| 305/322 [03:51<01:18,  4.60s/it]
 95%|█████████▌| 306/322 [03:52<00:55,  3.48s/it]
 95%|█████████▌| 307/322 [03:54<00:47,  3.16s/it]
 96%|█████████▌| 308/322 [04:12<01:43,  7.37s/it]
 96%|█████████▌| 309/322 [04:12<01:08,  5.29s/it]
 96%|█████████▋| 310/322 [04:24<01:26,  7.18s/it]
 97%|█████████▋| 311/322 [04:30<01:16,  6.98s/it]
 97%|█████████▋| 312/322 [04:43<01:25,  8.55s/it]
 97%|█████████▋| 313/322 [05:01<01:44, 11.60s/it]
 98%|█████████▊| 314/322 [05:12<01:31, 11.41s/it]
 98%|█████████▊| 315/322 [05:47<02:07, 18.23s/it]
 98%|█████████▊| 316/322 [06:07<01:52, 18.83s/it]
 98%|█████████▊| 317/322 [06:48<02:07, 25.41s/it]
 99%|█████████▉| 318/322 [06:51<01:14, 18.72s/it]
 99%|█████████▉| 319/322 [10:58<04:22, 87.44s/it]
 99%|█████████▉| 320/322 [13:50<03:45, 112.68s/it]
100%|█████████▉| 321/322 [14:09<01:24, 84.50s/it] 
100%|██████████| 322/322 [15:25<00:00, 82.11s/it]
100%|██████████| 322/322 [15:25<00:00,  2.88s/it]
+
  0%|          | 0/322 [00:00<?, ?it/s]
 84%|████████▎ | 269/322 [00:03<00:00, 87.78it/s]
 86%|████████▋ | 278/322 [00:24<00:04,  8.89it/s]
 86%|████████▋ | 278/322 [00:25<00:04,  8.89it/s]
 87%|████████▋ | 279/322 [00:28<00:06,  6.80it/s]
 88%|████████▊ | 283/322 [00:28<00:05,  6.96it/s]
 89%|████████▉ | 286/322 [00:38<00:09,  3.64it/s]
 89%|████████▉ | 287/322 [00:38<00:09,  3.62it/s]
 90%|████████▉ | 289/322 [00:38<00:08,  3.77it/s]
 90%|█████████ | 291/322 [00:45<00:12,  2.52it/s]
 91%|█████████ | 293/322 [00:46<00:14,  2.02it/s]
 91%|█████████▏| 294/322 [00:46<00:13,  2.12it/s]
 92%|█████████▏| 295/322 [00:47<00:13,  1.97it/s]
 92%|█████████▏| 296/322 [00:47<00:12,  2.01it/s]
 92%|█████████▏| 297/322 [00:47<00:11,  2.18it/s]
100%|██████████| 322/322 [00:48<00:00, 11.49it/s]
100%|██████████| 322/322 [00:48<00:00,  6.71it/s]
+Total results for monomer_protein: 322
+
  0%|          | 0/12 [00:00<?, ?it/s]
  8%|▊         | 1/12 [00:01<00:11,  1.06s/it]
 17%|█▋        | 2/12 [00:01<00:05,  1.72it/s]
 25%|██▌       | 3/12 [00:01<00:04,  2.19it/s]
 33%|███▎      | 4/12 [00:01<00:02,  2.81it/s]
 42%|████▏     | 5/12 [00:02<00:02,  3.37it/s]
 67%|██████▋   | 8/12 [00:02<00:00,  7.04it/s]
 67%|██████▋   | 8/12 [00:15<00:00,  7.04it/s]
 83%|████████▎ | 10/12 [00:19<00:06,  3.19s/it]
 92%|█████████▏| 11/12 [00:19<00:02,  2.60s/it]
100%|██████████| 12/12 [01:51<00:00, 22.96s/it]
100%|██████████| 12/12 [01:51<00:00,  9.26s/it]
+
  0%|          | 0/12 [00:00<?, ?it/s]
  8%|▊         | 1/12 [00:01<00:12,  1.12s/it]
 42%|████▏     | 5/12 [00:01<00:01,  4.53it/s]
 50%|█████     | 6/12 [00:01<00:01,  5.06it/s]
 83%|████████▎ | 10/12 [00:03<00:00,  2.39it/s]
100%|██████████| 12/12 [00:04<00:00,  2.71it/s]
100%|██████████| 12/12 [00:04<00:00,  2.78it/s]
+Total results for monomer_rna: 12
+
  0%|          | 0/12 [00:00<?, ?it/s]
  8%|▊         | 1/12 [00:00<00:05,  2.17it/s]
 17%|█▋        | 2/12 [00:00<00:03,  2.53it/s]
 33%|███▎      | 4/12 [00:01<00:01,  4.55it/s]
 42%|████▏     | 5/12 [00:01<00:01,  4.22it/s]
 50%|█████     | 6/12 [00:01<00:01,  3.37it/s]
 58%|█████▊    | 7/12 [00:01<00:01,  3.89it/s]
 67%|██████▋   | 8/12 [00:02<00:00,  4.01it/s]
 75%|███████▌  | 9/12 [00:02<00:00,  3.13it/s]
 83%|████████▎ | 10/12 [00:03<00:00,  2.50it/s]
 92%|█████████▏| 11/12 [00:06<00:01,  1.20s/it]
100%|██████████| 12/12 [00:40<00:00, 11.10s/it]
100%|██████████| 12/12 [00:40<00:00,  3.37s/it]
+
  0%|          | 0/12 [00:00<?, ?it/s]
 67%|██████▋   | 8/12 [00:00<00:00, 28.82it/s]
100%|██████████| 12/12 [00:00<00:00, 41.21it/s]
+Total results for monomer_dna: 12
+
  0%|          | 0/251 [00:00<?, ?it/s]
  1%|          | 3/251 [00:00<00:27,  8.87it/s]
  2%|▏         | 4/251 [00:00<00:44,  5.54it/s]
  2%|▏         | 5/251 [00:01<01:14,  3.32it/s]
  2%|▏         | 6/251 [00:01<01:07,  3.62it/s]
  3%|▎         | 7/251 [00:01<01:19,  3.08it/s]
  3%|▎         | 8/251 [00:02<01:58,  2.06it/s]
  4%|▎         | 9/251 [00:02<01:29,  2.70it/s]
  4%|▍         | 11/251 [00:04<01:58,  2.02it/s]
  5%|▍         | 12/251 [00:07<04:46,  1.20s/it]
  5%|▌         | 13/251 [00:07<03:45,  1.05it/s]
  6%|▌         | 14/251 [00:07<02:57,  1.34it/s]
  6%|▌         | 15/251 [00:08<03:13,  1.22it/s]
  6%|▋         | 16/251 [00:09<02:39,  1.47it/s]
  7%|▋         | 17/251 [00:09<02:02,  1.91it/s]
  7%|▋         | 18/251 [00:09<01:37,  2.38it/s]
  8%|▊         | 19/251 [00:10<02:00,  1.93it/s]
  8%|▊         | 21/251 [00:10<01:14,  3.08it/s]
  9%|▉         | 22/251 [00:10<01:16,  3.01it/s]
  9%|▉         | 23/251 [00:11<01:46,  2.14it/s]
 10%|▉         | 24/251 [00:11<01:32,  2.46it/s]
 10%|▉         | 25/251 [00:14<04:08,  1.10s/it]
 10%|█         | 26/251 [00:14<03:04,  1.22it/s]
 11%|█         | 27/251 [00:15<03:01,  1.24it/s]
 11%|█         | 28/251 [00:16<02:54,  1.28it/s]
 12%|█▏        | 29/251 [00:16<02:32,  1.45it/s]
 12%|█▏        | 30/251 [00:17<02:11,  1.68it/s]
 12%|█▏        | 31/251 [00:18<03:14,  1.13it/s]
 13%|█▎        | 32/251 [00:19<02:45,  1.32it/s]
 13%|█▎        | 33/251 [00:21<04:16,  1.18s/it]
 14%|█▎        | 34/251 [00:22<04:07,  1.14s/it]
 14%|█▍        | 35/251 [00:23<03:24,  1.05it/s]
 14%|█▍        | 36/251 [00:23<03:17,  1.09it/s]
 15%|█▍        | 37/251 [00:24<02:27,  1.45it/s]
 15%|█▌        | 38/251 [00:27<05:33,  1.56s/it]
 16%|█▌        | 39/251 [00:27<03:58,  1.13s/it]
 16%|█▋        | 41/251 [00:30<03:59,  1.14s/it]
 17%|█▋        | 42/251 [00:30<03:08,  1.11it/s]
 17%|█▋        | 43/251 [00:31<03:19,  1.04it/s]
 18%|█▊        | 44/251 [00:32<03:41,  1.07s/it]
 18%|█▊        | 45/251 [00:33<02:56,  1.16it/s]
 18%|█▊        | 46/251 [00:33<02:24,  1.42it/s]
 19%|█▉        | 48/251 [00:37<04:05,  1.21s/it]
 20%|█▉        | 49/251 [00:39<04:54,  1.46s/it]
 20%|█▉        | 50/251 [00:41<05:20,  1.59s/it]
 20%|██        | 51/251 [00:44<07:11,  2.16s/it]
 21%|██        | 52/251 [00:46<06:11,  1.87s/it]
 21%|██        | 53/251 [00:46<04:54,  1.49s/it]
 22%|██▏       | 54/251 [00:47<04:33,  1.39s/it]
 22%|██▏       | 55/251 [00:51<06:23,  1.96s/it]
 22%|██▏       | 56/251 [00:52<05:57,  1.83s/it]
 23%|██▎       | 57/251 [00:53<05:01,  1.56s/it]
 23%|██▎       | 58/251 [00:54<04:05,  1.27s/it]
 24%|██▎       | 59/251 [00:54<03:03,  1.05it/s]
 24%|██▍       | 60/251 [00:54<02:20,  1.36it/s]
 24%|██▍       | 61/251 [00:55<02:42,  1.17it/s]
 25%|██▍       | 62/251 [00:56<03:06,  1.01it/s]
 25%|██▌       | 63/251 [00:57<02:24,  1.30it/s]
 25%|██▌       | 64/251 [00:57<01:56,  1.61it/s]
 26%|██▌       | 65/251 [00:57<01:30,  2.06it/s]
 26%|██▋       | 66/251 [00:57<01:20,  2.31it/s]
 27%|██▋       | 67/251 [00:59<02:05,  1.47it/s]
 27%|██▋       | 68/251 [00:59<01:42,  1.79it/s]
 27%|██▋       | 69/251 [00:59<01:23,  2.19it/s]
 28%|██▊       | 70/251 [01:02<03:03,  1.01s/it]
 28%|██▊       | 71/251 [01:03<03:36,  1.20s/it]
 29%|██▊       | 72/251 [01:06<05:10,  1.73s/it]
 29%|██▉       | 73/251 [01:06<03:42,  1.25s/it]
 29%|██▉       | 74/251 [01:07<03:11,  1.08s/it]
 30%|██▉       | 75/251 [01:08<03:29,  1.19s/it]
 30%|███       | 76/251 [01:09<03:18,  1.13s/it]
 31%|███       | 77/251 [01:11<03:44,  1.29s/it]
 31%|███       | 78/251 [01:11<02:52,  1.00it/s]
 31%|███▏      | 79/251 [01:13<02:59,  1.04s/it]
 32%|███▏      | 80/251 [01:15<04:08,  1.45s/it]
 32%|███▏      | 81/251 [01:16<03:49,  1.35s/it]
 33%|███▎      | 82/251 [01:16<02:59,  1.06s/it]
 33%|███▎      | 83/251 [01:17<02:46,  1.01it/s]
 33%|███▎      | 84/251 [01:18<02:33,  1.09it/s]
 34%|███▍      | 85/251 [01:19<02:13,  1.25it/s]
 34%|███▍      | 86/251 [01:19<02:01,  1.36it/s]
 35%|███▍      | 87/251 [01:19<01:31,  1.79it/s]
 35%|███▌      | 88/251 [01:21<02:23,  1.14it/s]
 35%|███▌      | 89/251 [01:24<03:52,  1.43s/it]
 36%|███▌      | 90/251 [01:27<05:42,  2.13s/it]
 36%|███▋      | 91/251 [01:29<05:20,  2.01s/it]
 37%|███▋      | 93/251 [01:29<02:54,  1.11s/it]
 37%|███▋      | 94/251 [01:29<02:21,  1.11it/s]
 38%|███▊      | 95/251 [01:31<03:06,  1.20s/it]
 38%|███▊      | 96/251 [01:33<03:18,  1.28s/it]
 39%|███▊      | 97/251 [01:33<02:34,  1.00s/it]
 39%|███▉      | 98/251 [01:34<02:09,  1.18it/s]
 39%|███▉      | 99/251 [01:35<02:09,  1.17it/s]
 40%|███▉      | 100/251 [01:38<03:53,  1.54s/it]
 41%|████      | 102/251 [01:38<02:23,  1.04it/s]
 41%|████      | 103/251 [01:40<02:58,  1.21s/it]
 41%|████▏     | 104/251 [01:42<03:00,  1.23s/it]
 42%|████▏     | 105/251 [01:43<03:03,  1.26s/it]
 42%|████▏     | 106/251 [01:43<02:17,  1.05it/s]
 43%|████▎     | 108/251 [01:44<01:57,  1.22it/s]
 43%|████▎     | 109/251 [01:45<01:52,  1.26it/s]
 44%|████▍     | 110/251 [01:45<01:29,  1.57it/s]
 44%|████▍     | 111/251 [01:45<01:12,  1.93it/s]
 45%|████▍     | 112/251 [01:46<00:56,  2.48it/s]
 45%|████▌     | 113/251 [01:46<00:52,  2.63it/s]
 45%|████▌     | 114/251 [01:47<01:01,  2.22it/s]
 46%|████▌     | 116/251 [01:48<01:06,  2.02it/s]
 47%|████▋     | 117/251 [01:48<00:55,  2.43it/s]
 47%|████▋     | 118/251 [01:49<01:19,  1.68it/s]
 47%|████▋     | 119/251 [01:49<01:09,  1.91it/s]
 48%|████▊     | 120/251 [01:52<02:30,  1.15s/it]
 48%|████▊     | 121/251 [01:52<02:04,  1.04it/s]
 49%|████▊     | 122/251 [01:53<01:45,  1.23it/s]
 49%|████▉     | 123/251 [01:53<01:31,  1.40it/s]
 49%|████▉     | 124/251 [01:55<01:50,  1.15it/s]
 50%|████▉     | 125/251 [01:55<01:42,  1.23it/s]
 50%|█████     | 126/251 [01:56<01:19,  1.57it/s]
 51%|█████     | 127/251 [01:57<01:43,  1.19it/s]
 51%|█████     | 128/251 [01:58<01:41,  1.22it/s]
 51%|█████▏    | 129/251 [01:58<01:22,  1.48it/s]
 52%|█████▏    | 130/251 [02:00<01:52,  1.07it/s]
 52%|█████▏    | 131/251 [02:00<01:41,  1.18it/s]
 53%|█████▎    | 132/251 [02:00<01:19,  1.50it/s]
 53%|█████▎    | 133/251 [02:04<02:46,  1.41s/it]
 53%|█████▎    | 134/251 [02:04<02:16,  1.17s/it]
 54%|█████▍    | 135/251 [02:06<02:37,  1.36s/it]
 54%|█████▍    | 136/251 [02:07<02:15,  1.18s/it]
 55%|█████▍    | 137/251 [02:07<01:53,  1.01it/s]
 55%|█████▍    | 138/251 [02:07<01:24,  1.34it/s]
 55%|█████▌    | 139/251 [02:08<01:15,  1.48it/s]
 56%|█████▌    | 140/251 [02:09<01:40,  1.10it/s]
 57%|█████▋    | 143/251 [02:10<00:47,  2.29it/s]
 57%|█████▋    | 144/251 [02:10<00:40,  2.67it/s]
 58%|█████▊    | 145/251 [02:10<00:36,  2.93it/s]
 58%|█████▊    | 146/251 [02:10<00:31,  3.35it/s]
 59%|█████▊    | 147/251 [02:11<00:51,  2.03it/s]
 59%|█████▉    | 148/251 [02:16<02:46,  1.62s/it]
 59%|█████▉    | 149/251 [02:19<03:15,  1.92s/it]
 60%|█████▉    | 150/251 [02:20<03:00,  1.79s/it]
 60%|██████    | 151/251 [02:21<02:25,  1.46s/it]
 61%|██████    | 152/251 [02:22<02:16,  1.38s/it]
 61%|██████    | 153/251 [02:22<01:40,  1.02s/it]
 61%|██████▏   | 154/251 [02:22<01:18,  1.23it/s]
 62%|██████▏   | 155/251 [02:24<01:32,  1.04it/s]
 62%|██████▏   | 156/251 [02:24<01:10,  1.35it/s]
 63%|██████▎   | 157/251 [02:26<01:40,  1.07s/it]
 63%|██████▎   | 158/251 [02:27<01:52,  1.21s/it]
 63%|██████▎   | 159/251 [02:29<02:07,  1.38s/it]
 64%|██████▎   | 160/251 [02:30<01:50,  1.22s/it]
 64%|██████▍   | 161/251 [02:31<01:43,  1.15s/it]
 65%|██████▍   | 162/251 [02:31<01:18,  1.13it/s]
 65%|██████▍   | 163/251 [02:31<00:59,  1.47it/s]
 65%|██████▌   | 164/251 [02:32<00:49,  1.77it/s]
 66%|██████▌   | 165/251 [02:34<01:44,  1.21s/it]
 66%|██████▌   | 166/251 [02:34<01:15,  1.13it/s]
 67%|██████▋   | 167/251 [02:36<01:21,  1.02it/s]
 67%|██████▋   | 168/251 [02:36<01:03,  1.31it/s]
 67%|██████▋   | 169/251 [02:37<01:08,  1.19it/s]
 68%|██████▊   | 170/251 [02:40<02:02,  1.51s/it]
 68%|██████▊   | 171/251 [02:40<01:27,  1.09s/it]
 69%|██████▊   | 172/251 [02:41<01:10,  1.12it/s]
 69%|██████▉   | 173/251 [02:44<02:04,  1.60s/it]
 69%|██████▉   | 174/251 [02:45<02:00,  1.57s/it]
 70%|██████▉   | 175/251 [02:45<01:27,  1.16s/it]
 70%|███████   | 176/251 [02:46<01:10,  1.06it/s]
 71%|███████   | 177/251 [02:48<01:32,  1.25s/it]
 71%|███████   | 178/251 [02:50<01:44,  1.43s/it]
 71%|███████▏  | 179/251 [02:52<02:01,  1.69s/it]
 72%|███████▏  | 180/251 [02:57<03:05,  2.61s/it]
 72%|███████▏  | 181/251 [02:57<02:09,  1.86s/it]
 73%|███████▎  | 182/251 [02:58<01:42,  1.49s/it]
 73%|███████▎  | 183/251 [02:58<01:17,  1.14s/it]
 73%|███████▎  | 184/251 [03:00<01:33,  1.39s/it]
 74%|███████▎  | 185/251 [03:00<01:07,  1.02s/it]
 74%|███████▍  | 186/251 [03:01<01:07,  1.04s/it]
 75%|███████▍  | 187/251 [03:06<02:18,  2.17s/it]
 75%|███████▍  | 188/251 [03:06<01:40,  1.59s/it]
 75%|███████▌  | 189/251 [03:07<01:29,  1.45s/it]
 76%|███████▌  | 190/251 [03:09<01:34,  1.55s/it]
 76%|███████▌  | 191/251 [03:10<01:17,  1.29s/it]
 76%|███████▋  | 192/251 [03:10<01:06,  1.12s/it]
 77%|███████▋  | 193/251 [03:11<00:54,  1.05it/s]
 77%|███████▋  | 194/251 [03:11<00:42,  1.33it/s]
 78%|███████▊  | 195/251 [03:11<00:32,  1.72it/s]
 78%|███████▊  | 196/251 [03:12<00:27,  1.98it/s]
 78%|███████▊  | 197/251 [03:17<01:36,  1.79s/it]
 79%|███████▉  | 198/251 [03:18<01:27,  1.64s/it]
 80%|███████▉  | 200/251 [03:18<00:51,  1.01s/it]
 80%|████████  | 201/251 [03:19<00:47,  1.04it/s]
 80%|████████  | 202/251 [03:21<00:55,  1.12s/it]
 81%|████████  | 203/251 [03:24<01:15,  1.57s/it]
 81%|████████▏ | 204/251 [03:24<00:57,  1.23s/it]
 82%|████████▏ | 205/251 [03:31<02:07,  2.78s/it]
 82%|████████▏ | 206/251 [03:33<02:05,  2.78s/it]
 82%|████████▏ | 207/251 [03:34<01:34,  2.14s/it]
 83%|████████▎ | 208/251 [03:36<01:25,  1.99s/it]
 83%|████████▎ | 209/251 [03:39<01:38,  2.33s/it]
 84%|████████▎ | 210/251 [03:41<01:28,  2.16s/it]
 84%|████████▍ | 211/251 [03:41<01:04,  1.62s/it]
 84%|████████▍ | 212/251 [03:45<01:31,  2.33s/it]
 85%|████████▍ | 213/251 [03:57<03:16,  5.16s/it]
 85%|████████▌ | 214/251 [03:59<02:34,  4.18s/it]
 86%|████████▌ | 215/251 [03:59<01:49,  3.03s/it]
 86%|████████▌ | 216/251 [03:59<01:16,  2.19s/it]
 86%|████████▋ | 217/251 [04:01<01:07,  1.98s/it]
 87%|████████▋ | 218/251 [04:06<01:37,  2.96s/it]
 87%|████████▋ | 219/251 [04:08<01:31,  2.85s/it]
 88%|████████▊ | 220/251 [04:17<02:21,  4.57s/it]
 88%|████████▊ | 221/251 [04:27<03:02,  6.09s/it]
 88%|████████▊ | 222/251 [04:44<04:32,  9.41s/it]
 89%|████████▉ | 223/251 [04:58<05:03, 10.85s/it]
 89%|████████▉ | 224/251 [05:01<03:50,  8.54s/it]
 90%|████████▉ | 225/251 [05:07<03:17,  7.61s/it]
 90%|█████████ | 226/251 [05:19<03:46,  9.07s/it]
 90%|█████████ | 227/251 [05:25<03:12,  8.01s/it]
 91%|█████████ | 228/251 [05:34<03:13,  8.40s/it]
 91%|█████████ | 229/251 [05:37<02:29,  6.79s/it]
 92%|█████████▏| 230/251 [05:39<01:50,  5.24s/it]
 92%|█████████▏| 231/251 [05:47<02:02,  6.11s/it]
 92%|█████████▏| 232/251 [05:53<01:58,  6.23s/it]
 93%|█████████▎| 233/251 [06:00<01:57,  6.53s/it]
 93%|█████████▎| 234/251 [06:01<01:18,  4.64s/it]
 94%|█████████▎| 235/251 [06:11<01:41,  6.37s/it]
 94%|█████████▍| 236/251 [06:11<01:07,  4.53s/it]
 94%|█████████▍| 237/251 [06:50<03:26, 14.73s/it]
 95%|█████████▍| 238/251 [07:00<02:52, 13.30s/it]
 95%|█████████▌| 239/251 [07:08<02:22, 11.89s/it]
 96%|█████████▌| 240/251 [07:33<02:53, 15.78s/it]
 96%|█████████▌| 241/251 [08:01<03:14, 19.43s/it]
 96%|█████████▋| 242/251 [08:04<02:08, 14.32s/it]
 97%|█████████▋| 243/251 [08:43<02:54, 21.80s/it]
 97%|█████████▋| 244/251 [08:54<02:10, 18.70s/it]
 98%|█████████▊| 245/251 [08:58<01:24, 14.08s/it]
 98%|█████████▊| 246/251 [09:20<01:22, 16.57s/it]
 98%|█████████▊| 247/251 [09:36<01:05, 16.36s/it]
 99%|█████████▉| 248/251 [09:52<00:48, 16.22s/it]
 99%|█████████▉| 249/251 [10:15<00:36, 18.18s/it]
100%|█████████▉| 250/251 [13:47<01:16, 76.44s/it]
100%|██████████| 251/251 [16:38<00:00, 104.71s/it]
100%|██████████| 251/251 [16:38<00:00,  3.98s/it] 
+
  0%|          | 0/251 [00:00<?, ?it/s]
 79%|███████▉  | 199/251 [00:03<00:00, 54.07it/s]
 82%|████████▏ | 205/251 [00:04<00:01, 41.78it/s]
 83%|████████▎ | 208/251 [00:09<00:03, 14.18it/s]
 84%|████████▎ | 210/251 [00:13<00:05,  7.85it/s]
 84%|████████▍ | 211/251 [00:14<00:05,  7.41it/s]
 86%|████████▋ | 217/251 [00:20<00:08,  3.79it/s]
 88%|████████▊ | 220/251 [00:22<00:08,  3.63it/s]
 88%|████████▊ | 221/251 [00:42<00:25,  1.16it/s]
 88%|████████▊ | 222/251 [00:47<00:40,  1.41s/it]
 93%|█████████▎| 233/251 [00:55<00:19,  1.11s/it]
 93%|█████████▎| 234/251 [00:56<00:18,  1.06s/it]
 94%|█████████▍| 236/251 [01:01<00:19,  1.28s/it]
 94%|█████████▍| 237/251 [01:12<00:28,  2.07s/it]
 95%|█████████▍| 238/251 [01:14<00:28,  2.17s/it]
 95%|█████████▌| 239/251 [01:14<00:22,  1.88s/it]
 96%|█████████▌| 240/251 [01:14<00:17,  1.62s/it]
100%|██████████| 251/251 [01:14<00:00,  3.35it/s]
+Total results for interface_protein_protein: 251
+
  0%|          | 0/154 [00:00<?, ?it/s]
  1%|          | 1/154 [00:05<14:56,  5.86s/it]
  1%|▏         | 2/154 [00:14<19:08,  7.56s/it]
  2%|▏         | 3/154 [00:15<10:59,  4.37s/it]
  3%|▎         | 4/154 [00:17<09:15,  3.70s/it]
  3%|▎         | 5/154 [00:18<06:10,  2.49s/it]
  4%|▍         | 6/154 [00:21<06:42,  2.72s/it]
  5%|▍         | 7/154 [00:23<05:55,  2.42s/it]
  5%|▌         | 8/154 [00:24<04:40,  1.92s/it]
  6%|▌         | 9/154 [00:24<03:43,  1.54s/it]
  6%|▋         | 10/154 [00:25<03:28,  1.45s/it]
  7%|▋         | 11/154 [00:27<03:12,  1.35s/it]
  8%|▊         | 12/154 [00:28<03:34,  1.51s/it]
  8%|▊         | 13/154 [00:31<04:22,  1.86s/it]
  9%|▉         | 14/154 [00:32<03:24,  1.46s/it]
 10%|▉         | 15/154 [00:35<04:33,  1.96s/it]
 10%|█         | 16/154 [00:39<06:01,  2.62s/it]
 11%|█         | 17/154 [00:39<04:27,  1.95s/it]
 12%|█▏        | 18/154 [00:40<03:47,  1.67s/it]
 12%|█▏        | 19/154 [00:41<03:05,  1.38s/it]
 13%|█▎        | 20/154 [00:42<02:45,  1.24s/it]
 14%|█▎        | 21/154 [00:45<03:58,  1.79s/it]
 14%|█▍        | 22/154 [00:47<03:43,  1.69s/it]
 15%|█▍        | 23/154 [00:52<05:53,  2.70s/it]
 16%|█▌        | 24/154 [00:53<04:46,  2.21s/it]
 16%|█▌        | 25/154 [00:53<03:34,  1.66s/it]
 17%|█▋        | 26/154 [00:54<03:16,  1.54s/it]
 18%|█▊        | 27/154 [00:55<02:38,  1.25s/it]
 18%|█▊        | 28/154 [01:02<06:19,  3.01s/it]
 19%|█▉        | 29/154 [01:04<05:33,  2.67s/it]
 19%|█▉        | 30/154 [01:05<04:46,  2.31s/it]
 20%|██        | 31/154 [01:14<08:57,  4.37s/it]
 21%|██        | 32/154 [01:16<07:06,  3.50s/it]
 21%|██▏       | 33/154 [01:17<05:27,  2.71s/it]
 22%|██▏       | 34/154 [01:17<04:08,  2.07s/it]
 23%|██▎       | 35/154 [01:18<03:19,  1.68s/it]
 23%|██▎       | 36/154 [01:26<06:44,  3.43s/it]
 24%|██▍       | 37/154 [01:26<04:44,  2.44s/it]
 25%|██▍       | 38/154 [01:29<04:56,  2.55s/it]
 25%|██▌       | 39/154 [01:30<04:01,  2.10s/it]
 26%|██▌       | 40/154 [01:32<04:16,  2.25s/it]
 27%|██▋       | 41/154 [01:33<03:11,  1.69s/it]
 27%|██▋       | 42/154 [01:33<02:40,  1.43s/it]
 28%|██▊       | 43/154 [01:34<01:57,  1.06s/it]
 29%|██▊       | 44/154 [01:35<02:04,  1.13s/it]
 29%|██▉       | 45/154 [01:35<01:43,  1.06it/s]
 30%|██▉       | 46/154 [01:36<01:37,  1.11it/s]
 31%|███       | 47/154 [01:41<03:55,  2.20s/it]
 31%|███       | 48/154 [01:43<03:28,  1.96s/it]
 32%|███▏      | 49/154 [01:43<02:36,  1.50s/it]
 32%|███▏      | 50/154 [01:47<03:53,  2.25s/it]
 33%|███▎      | 51/154 [01:50<04:00,  2.34s/it]
 34%|███▍      | 52/154 [01:54<04:49,  2.84s/it]
 34%|███▍      | 53/154 [01:58<05:23,  3.20s/it]
 35%|███▌      | 54/154 [02:01<05:05,  3.05s/it]
 36%|███▌      | 55/154 [02:02<04:21,  2.64s/it]
 36%|███▋      | 56/154 [02:03<03:29,  2.14s/it]
 37%|███▋      | 57/154 [02:04<02:42,  1.68s/it]
 38%|███▊      | 58/154 [02:05<02:27,  1.54s/it]
 38%|███▊      | 59/154 [02:05<01:46,  1.12s/it]
 39%|███▉      | 60/154 [02:07<02:09,  1.38s/it]
 40%|███▉      | 61/154 [02:09<02:30,  1.61s/it]
 40%|████      | 62/154 [02:13<03:13,  2.10s/it]
 41%|████      | 63/154 [02:15<03:30,  2.31s/it]
 42%|████▏     | 64/154 [02:18<03:38,  2.42s/it]
 42%|████▏     | 65/154 [02:20<03:11,  2.15s/it]
 43%|████▎     | 66/154 [02:24<04:00,  2.73s/it]
 44%|████▎     | 67/154 [02:26<03:53,  2.68s/it]
 44%|████▍     | 68/154 [02:30<04:21,  3.04s/it]
 45%|████▍     | 69/154 [02:33<04:08,  2.92s/it]
 45%|████▌     | 70/154 [02:42<06:45,  4.82s/it]
 46%|████▌     | 71/154 [02:45<06:03,  4.38s/it]
 47%|████▋     | 72/154 [02:46<04:15,  3.12s/it]
 47%|████▋     | 73/154 [02:50<04:56,  3.66s/it]
 48%|████▊     | 74/154 [02:51<03:39,  2.74s/it]
 49%|████▊     | 75/154 [02:55<04:02,  3.07s/it]
 49%|████▉     | 76/154 [02:57<03:29,  2.68s/it]
 50%|█████     | 77/154 [02:58<02:49,  2.20s/it]
 51%|█████     | 78/154 [02:59<02:30,  1.98s/it]
 51%|█████▏    | 79/154 [03:00<01:55,  1.54s/it]
 52%|█████▏    | 80/154 [03:05<03:24,  2.77s/it]
 53%|█████▎    | 81/154 [03:14<05:28,  4.50s/it]
 53%|█████▎    | 82/154 [03:19<05:31,  4.60s/it]
 54%|█████▍    | 83/154 [03:20<04:19,  3.65s/it]
 55%|█████▍    | 84/154 [03:21<03:17,  2.82s/it]
 55%|█████▌    | 85/154 [03:22<02:37,  2.29s/it]
 56%|█████▌    | 86/154 [03:30<04:25,  3.90s/it]
 56%|█████▋    | 87/154 [03:35<04:48,  4.31s/it]
 57%|█████▋    | 88/154 [03:37<03:57,  3.60s/it]
 58%|█████▊    | 89/154 [03:42<04:31,  4.18s/it]
 58%|█████▊    | 90/154 [03:44<03:44,  3.50s/it]
 59%|█████▉    | 91/154 [03:45<02:36,  2.49s/it]
 60%|██████    | 93/154 [03:45<01:23,  1.37s/it]
 61%|██████    | 94/154 [03:45<01:07,  1.12s/it]
 62%|██████▏   | 95/154 [03:48<01:41,  1.72s/it]
 62%|██████▏   | 96/154 [03:52<02:04,  2.15s/it]
 63%|██████▎   | 97/154 [03:54<02:08,  2.26s/it]
 64%|██████▎   | 98/154 [04:02<03:30,  3.76s/it]
 64%|██████▍   | 99/154 [04:05<03:23,  3.70s/it]
 65%|██████▍   | 100/154 [04:08<03:03,  3.39s/it]
 66%|██████▌   | 101/154 [04:12<03:03,  3.46s/it]
 66%|██████▌   | 102/154 [04:13<02:29,  2.87s/it]
 67%|██████▋   | 103/154 [04:14<02:03,  2.42s/it]
 68%|██████▊   | 104/154 [04:18<02:13,  2.67s/it]
 68%|██████▊   | 105/154 [04:26<03:28,  4.25s/it]
 69%|██████▉   | 107/154 [04:29<02:20,  3.00s/it]
 70%|███████   | 108/154 [04:34<02:43,  3.56s/it]
 71%|███████   | 109/154 [04:34<02:02,  2.73s/it]
 71%|███████▏  | 110/154 [04:38<02:13,  3.04s/it]
 72%|███████▏  | 111/154 [04:41<02:08,  2.99s/it]
 73%|███████▎  | 112/154 [04:42<01:37,  2.33s/it]
 74%|███████▍  | 114/154 [04:44<01:06,  1.67s/it]
 75%|███████▍  | 115/154 [04:46<01:11,  1.83s/it]
 75%|███████▌  | 116/154 [04:49<01:23,  2.18s/it]
 76%|███████▌  | 117/154 [04:50<01:13,  1.98s/it]
 77%|███████▋  | 118/154 [04:55<01:39,  2.75s/it]
 77%|███████▋  | 119/154 [04:56<01:16,  2.19s/it]
 78%|███████▊  | 120/154 [05:03<01:57,  3.45s/it]
 79%|███████▊  | 121/154 [05:12<02:54,  5.30s/it]
 79%|███████▉  | 122/154 [05:28<04:31,  8.49s/it]
 80%|███████▉  | 123/154 [05:34<03:59,  7.73s/it]
 81%|████████  | 124/154 [05:38<03:14,  6.47s/it]
 81%|████████  | 125/154 [05:41<02:42,  5.59s/it]
 82%|████████▏ | 126/154 [05:44<02:11,  4.70s/it]
 82%|████████▏ | 127/154 [06:01<03:47,  8.43s/it]
 83%|████████▎ | 128/154 [06:06<03:11,  7.37s/it]
 84%|████████▍ | 129/154 [06:10<02:41,  6.47s/it]
 84%|████████▍ | 130/154 [06:17<02:37,  6.57s/it]
 85%|████████▌ | 131/154 [06:20<02:03,  5.37s/it]
 86%|████████▌ | 132/154 [06:21<01:30,  4.11s/it]
 86%|████████▋ | 133/154 [06:24<01:20,  3.82s/it]
 87%|████████▋ | 134/154 [06:39<02:24,  7.23s/it]
 88%|████████▊ | 135/154 [06:47<02:20,  7.41s/it]
 88%|████████▊ | 136/154 [06:49<01:41,  5.66s/it]
 89%|████████▉ | 137/154 [07:00<02:05,  7.39s/it]
 90%|████████▉ | 138/154 [07:04<01:39,  6.25s/it]
 90%|█████████ | 139/154 [07:06<01:15,  5.02s/it]
 91%|█████████ | 140/154 [07:15<01:25,  6.12s/it]
 92%|█████████▏| 141/154 [07:38<02:27, 11.38s/it]
 92%|█████████▏| 142/154 [07:51<02:20, 11.70s/it]
 93%|█████████▎| 143/154 [07:58<01:54, 10.38s/it]
 94%|█████████▎| 144/154 [08:04<01:29,  8.98s/it]
 94%|█████████▍| 145/154 [08:56<03:16, 21.88s/it]
 95%|█████████▍| 146/154 [09:12<02:41, 20.20s/it]
 95%|█████████▌| 147/154 [09:52<03:03, 26.24s/it]
 96%|█████████▌| 148/154 [10:25<02:49, 28.33s/it]
 97%|█████████▋| 149/154 [11:33<03:20, 40.18s/it]
 97%|█████████▋| 150/154 [13:08<03:45, 56.42s/it]
 98%|█████████▊| 151/154 [13:37<02:24, 48.32s/it]
 99%|█████████▊| 152/154 [14:45<01:48, 54.08s/it]
 99%|█████████▉| 153/154 [15:25<00:49, 49.90s/it]
100%|██████████| 154/154 [29:24<00:00, 286.76s/it]
100%|██████████| 154/154 [29:24<00:00, 11.46s/it] 
+
  0%|          | 0/154 [00:00<?, ?it/s]
  1%|          | 1/154 [00:13<35:31, 13.93s/it]
  1%|▏         | 2/154 [01:16<1:48:23, 42.78s/it]
  2%|▏         | 3/154 [01:57<1:12:54, 28.97s/it]
  3%|▎         | 4/154 [03:31<2:27:56, 59.18s/it]
  3%|▎         | 5/154 [05:19<2:43:32, 65.86s/it]
  4%|▍         | 6/154 [05:19<2:26:52, 59.55s/it]
  5%|▍         | 7/154 [05:35<1:47:36, 43.92s/it]
  5%|▌         | 8/154 [06:57<1:32:16, 37.92s/it]
  6%|▌         | 9/154 [07:56<1:49:09, 45.17s/it]
  6%|▋         | 10/154 [07:56<1:58:28, 49.36s/it]
 66%|██████▌   | 101/154 [08:21<01:17,  1.47s/it] 
 66%|██████▌   | 102/154 [09:24<01:44,  2.01s/it]
 67%|██████▋   | 103/154 [09:35<02:19,  2.74s/it]
 68%|██████▊   | 104/154 [09:40<02:20,  2.81s/it]
 68%|██████▊   | 105/154 [09:53<02:24,  2.94s/it]
 69%|██████▉   | 106/154 [09:54<02:32,  3.18s/it]
100%|██████████| 154/154 [09:54<00:00,  3.86s/it]
+Total results for interface_antibody_antigen: 154
+
  0%|          | 0/41 [00:00<?, ?it/s]
 10%|▉         | 4/41 [00:00<00:06,  6.06it/s]
 12%|█▏        | 5/41 [00:03<00:28,  1.25it/s]
 15%|█▍        | 6/41 [00:13<02:00,  3.45s/it]
 17%|█▋        | 7/41 [00:14<01:35,  2.81s/it]
 20%|█▉        | 8/41 [00:15<01:08,  2.07s/it]
 22%|██▏       | 9/41 [00:16<01:00,  1.88s/it]
 24%|██▍       | 10/41 [00:16<00:42,  1.36s/it]
 27%|██▋       | 11/41 [00:23<01:31,  3.05s/it]
 29%|██▉       | 12/41 [00:24<01:07,  2.32s/it]
 32%|███▏      | 13/41 [00:26<01:05,  2.32s/it]
 34%|███▍      | 14/41 [00:31<01:19,  2.93s/it]
 37%|███▋      | 15/41 [00:33<01:11,  2.74s/it]
 39%|███▉      | 16/41 [00:35<01:06,  2.65s/it]
 41%|████▏     | 17/41 [00:37<00:55,  2.32s/it]
 44%|████▍     | 18/41 [00:43<01:22,  3.58s/it]
 46%|████▋     | 19/41 [00:54<02:03,  5.61s/it]
 49%|████▉     | 20/41 [01:04<02:30,  7.16s/it]
 51%|█████     | 21/41 [01:18<03:02,  9.14s/it]
 54%|█████▎    | 22/41 [01:24<02:32,  8.01s/it]
 56%|█████▌    | 23/41 [01:25<01:50,  6.15s/it]
 59%|█████▊    | 24/41 [02:05<04:35, 16.19s/it]
 61%|██████    | 25/41 [02:14<03:44, 14.01s/it]
 63%|██████▎   | 26/41 [02:27<03:23, 13.58s/it]
 66%|██████▌   | 27/41 [02:29<02:23, 10.28s/it]
 68%|██████▊   | 28/41 [02:39<02:13, 10.24s/it]
 71%|███████   | 29/41 [02:47<01:55,  9.59s/it]
 73%|███████▎  | 30/41 [02:50<01:21,  7.37s/it]
 76%|███████▌  | 31/41 [03:01<01:24,  8.49s/it]
 78%|███████▊  | 32/41 [03:28<02:06, 14.08s/it]
 80%|████████  | 33/41 [04:03<02:43, 20.38s/it]
 83%|████████▎ | 34/41 [04:21<02:18, 19.74s/it]
 85%|████████▌ | 35/41 [04:50<02:14, 22.46s/it]
 88%|████████▊ | 36/41 [04:59<01:32, 18.53s/it]
 90%|█████████ | 37/41 [05:31<01:29, 22.48s/it]
 93%|█████████▎| 38/41 [06:50<01:58, 39.58s/it]
 95%|█████████▌| 39/41 [06:51<00:55, 27.88s/it]
 98%|█████████▊| 40/41 [09:23<01:05, 65.25s/it]
100%|██████████| 41/41 [09:55<00:00, 55.22s/it]
100%|██████████| 41/41 [09:55<00:00, 14.53s/it]
+
  0%|          | 0/41 [00:00<?, ?it/s]
  5%|▍         | 2/41 [00:45<14:56, 22.98s/it]
 15%|█▍        | 6/41 [01:24<07:37, 13.06s/it]
 17%|█▋        | 7/41 [01:36<07:21, 12.98s/it]
 20%|█▉        | 8/41 [02:13<09:18, 16.94s/it]
 22%|██▏       | 9/41 [02:43<08:55, 16.74s/it]
 24%|██▍       | 10/41 [02:46<09:27, 18.30s/it]
100%|██████████| 41/41 [02:46<00:00,  4.05s/it]
+Total results for interface_protein_peptide: 41
+
  0%|          | 0/51 [00:00<?, ?it/s]
 12%|█▏        | 6/51 [00:00<00:00, 50.99it/s]
 24%|██▎       | 12/51 [00:06<00:23,  1.70it/s]
 29%|██▉       | 15/51 [00:16<00:50,  1.41s/it]
 33%|███▎      | 17/51 [00:20<00:52,  1.54s/it]
 37%|███▋      | 19/51 [00:22<00:48,  1.50s/it]
 39%|███▉      | 20/51 [00:24<00:49,  1.58s/it]
 41%|████      | 21/51 [00:27<00:50,  1.69s/it]
 43%|████▎     | 22/51 [00:35<01:28,  3.05s/it]
 45%|████▌     | 23/51 [00:39<01:32,  3.29s/it]
 47%|████▋     | 24/51 [00:40<01:13,  2.71s/it]
 49%|████▉     | 25/51 [00:41<00:54,  2.11s/it]
 51%|█████     | 26/51 [00:45<01:04,  2.60s/it]
 53%|█████▎    | 27/51 [00:47<01:02,  2.61s/it]
 55%|█████▍    | 28/51 [00:48<00:50,  2.20s/it]
 57%|█████▋    | 29/51 [00:51<00:51,  2.35s/it]
 59%|█████▉    | 30/51 [00:56<01:07,  3.22s/it]
 61%|██████    | 31/51 [01:14<02:27,  7.36s/it]
 63%|██████▎   | 32/51 [01:56<05:37, 17.74s/it]
 65%|██████▍   | 33/51 [02:10<04:55, 16.44s/it]
 67%|██████▋   | 34/51 [02:13<03:31, 12.47s/it]
 69%|██████▊   | 35/51 [02:17<02:39,  9.99s/it]
 71%|███████   | 36/51 [03:29<07:08, 28.58s/it]
 73%|███████▎  | 37/51 [03:54<06:26, 27.62s/it]
 75%|███████▍  | 38/51 [04:06<04:55, 22.77s/it]
 76%|███████▋  | 39/51 [04:40<05:13, 26.13s/it]
 78%|███████▊  | 40/51 [04:47<03:45, 20.51s/it]
 80%|████████  | 41/51 [05:36<04:50, 29.02s/it]
 82%|████████▏ | 42/51 [05:59<04:03, 27.08s/it]
 84%|████████▍ | 43/51 [07:55<07:10, 53.84s/it]
 86%|████████▋ | 44/51 [09:26<07:35, 65.06s/it]
 90%|█████████ | 46/51 [10:23<04:00, 48.20s/it]
 92%|█████████▏| 47/51 [11:20<03:21, 50.43s/it]
 94%|█████████▍| 48/51 [12:43<02:56, 58.94s/it]
 96%|█████████▌| 49/51 [13:14<01:42, 51.35s/it]
 98%|█████████▊| 50/51 [13:15<00:37, 37.07s/it]
100%|██████████| 51/51 [14:56<00:00, 55.46s/it]
100%|██████████| 51/51 [14:56<00:00, 17.58s/it]
+
  0%|          | 0/51 [00:00<?, ?it/s]
  2%|▏         | 1/51 [00:00<00:17,  2.90it/s]
  4%|▍         | 2/51 [00:03<01:51,  2.27s/it]
  6%|▌         | 3/51 [02:03<30:52, 38.60s/it]
  8%|▊         | 4/51 [02:09<31:58, 40.81s/it]
 10%|▉         | 5/51 [02:13<20:50, 27.19s/it]
 12%|█▏        | 6/51 [03:22<23:36, 31.48s/it]
 14%|█▎        | 7/51 [03:25<23:28, 32.01s/it]
 16%|█▌        | 8/51 [03:31<16:56, 23.63s/it]
 18%|█▊        | 9/51 [03:34<11:53, 16.99s/it]
 20%|█▉        | 10/51 [03:58<08:53, 13.02s/it]
 22%|██▏       | 11/51 [04:00<10:15, 15.39s/it]
 24%|██▎       | 12/51 [04:00<07:16, 11.19s/it]
100%|██████████| 51/51 [04:03<00:00,  1.43it/s]
100%|██████████| 51/51 [04:03<00:00,  4.78s/it]
+Total results for interface_protein_rna: 51
+
  0%|          | 0/51 [00:00<?, ?it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+
  2%|▏         | 1/51 [00:00<00:19,  2.56it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+
 10%|▉         | 5/51 [00:00<00:04, 10.74it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain B, native chain E1_3: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+
 22%|██▏       | 11/51 [00:00<00:01, 22.12it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain C, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain C, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+
 31%|███▏      | 16/51 [00:00<00:01, 26.64it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+
 39%|███▉      | 20/51 [00:00<00:01, 29.14it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain D, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 7 mismatches
+if they should be treated as homologous.
+
 47%|████▋     | 24/51 [00:01<00:01, 26.12it/s]
 55%|█████▍    | 28/51 [00:01<00:00, 26.33it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain F, native chain E2_1: 8 mismatches, Model chain F, native chain E2_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain F, native chain E2_1: 8 mismatches, Model chain F, native chain E2_2: 8 mismatches, Model chain D, native chain E3_1: 9 mismatches, Model chain D, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1: 8 mismatches, Model chain E, native chain E2: 6 mismatches, Model chain E, native chain E3: 5 mismatches, Model chain C, native chain E5: 1 mismatches, Model chain E, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain A, native chain E5: 1 mismatches, Model chain D, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain B, native chain E5: 1 mismatches, Model chain D, native chain E5: 1 mismatches
+if they should be treated as homologous.
+
 61%|██████    | 31/51 [00:01<00:01, 16.85it/s]
 69%|██████▊   | 35/51 [00:01<00:00, 19.59it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1: 7 mismatches, Model chain F, native chain E2: 6 mismatches, Model chain F, native chain E3: 5 mismatches, Model chain F, native chain E4_1: 2 mismatches, Model chain F, native chain E4_2: 2 mismatches, Model chain F, native chain E4_3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1: 7 mismatches, Model chain F, native chain E2: 6 mismatches, Model chain F, native chain E3: 5 mismatches, Model chain F, native chain E4_1: 2 mismatches, Model chain F, native chain E4_2: 2 mismatches, Model chain F, native chain E4_3: 2 mismatches, Model chain C, native chain E5: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 9 mismatches, Model chain B, native chain E1_2: 9 mismatches
+if they should be treated as homologous.
+
 75%|███████▍  | 38/51 [00:02<00:00, 14.17it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E3: 9 mismatches, Model chain B, native chain E3: 5 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain B, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E5: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E4: 7 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+
 78%|███████▊  | 40/51 [00:02<00:00, 12.62it/s]
 82%|████████▏ | 42/51 [00:02<00:00, 12.72it/s]
 86%|████████▋ | 44/51 [00:02<00:00, 13.64it/s]
 90%|█████████ | 46/51 [00:02<00:00, 13.27it/s]
 94%|█████████▍| 48/51 [00:03<00:00,  9.50it/s]
 98%|█████████▊| 50/51 [00:03<00:00,  6.58it/s]
100%|██████████| 51/51 [00:04<00:00,  3.15it/s]
100%|██████████| 51/51 [00:04<00:00, 10.46it/s]
+Total results for interface_protein_rna: 51
+
  0%|          | 0/311 [00:00<?, ?it/s]
  3%|▎         | 8/311 [00:02<01:16,  3.95it/s]
  3%|▎         | 9/311 [00:02<01:19,  3.80it/s]
  3%|▎         | 10/311 [00:02<01:29,  3.36it/s]
  4%|▎         | 11/311 [00:03<02:03,  2.43it/s]
  4%|▍         | 12/311 [00:03<01:55,  2.59it/s]
  4%|▍         | 13/311 [00:04<01:48,  2.75it/s]
  5%|▍         | 15/311 [00:06<03:00,  1.64it/s]
  5%|▌         | 17/311 [00:06<01:59,  2.45it/s]
  6%|▌         | 18/311 [00:06<01:42,  2.87it/s]
  6%|▋         | 20/311 [00:06<01:25,  3.41it/s]
  7%|▋         | 21/311 [00:07<02:11,  2.20it/s]
  7%|▋         | 23/311 [00:08<01:31,  3.14it/s]
  8%|▊         | 24/311 [00:08<01:19,  3.61it/s]
  8%|▊         | 25/311 [00:08<01:25,  3.35it/s]
  8%|▊         | 26/311 [00:10<03:48,  1.25it/s]
  9%|▊         | 27/311 [00:11<03:05,  1.53it/s]
  9%|▉         | 28/311 [00:11<02:23,  1.97it/s]
 10%|▉         | 30/311 [00:11<01:42,  2.73it/s]
 10%|▉         | 31/311 [00:13<03:12,  1.45it/s]
 10%|█         | 32/311 [00:13<02:56,  1.58it/s]
 11%|█         | 33/311 [00:14<02:33,  1.81it/s]
 11%|█         | 34/311 [00:15<03:26,  1.34it/s]
 11%|█▏        | 35/311 [00:15<02:41,  1.71it/s]
 12%|█▏        | 36/311 [00:18<05:41,  1.24s/it]
 12%|█▏        | 37/311 [00:19<04:47,  1.05s/it]
 12%|█▏        | 38/311 [00:19<03:43,  1.22it/s]
 13%|█▎        | 39/311 [00:19<03:32,  1.28it/s]
 13%|█▎        | 40/311 [00:20<03:28,  1.30it/s]
 13%|█▎        | 41/311 [00:23<06:15,  1.39s/it]
 14%|█▎        | 42/311 [00:24<05:43,  1.28s/it]
 14%|█▍        | 43/311 [00:24<04:10,  1.07it/s]
 14%|█▍        | 44/311 [00:26<05:30,  1.24s/it]
 14%|█▍        | 45/311 [00:29<07:51,  1.77s/it]
 15%|█▍        | 46/311 [00:30<06:27,  1.46s/it]
 15%|█▌        | 47/311 [00:31<05:36,  1.28s/it]
 15%|█▌        | 48/311 [00:31<04:53,  1.12s/it]
 16%|█▌        | 49/311 [00:33<05:43,  1.31s/it]
 16%|█▌        | 50/311 [00:34<04:44,  1.09s/it]
 16%|█▋        | 51/311 [00:39<10:28,  2.42s/it]
 17%|█▋        | 52/311 [00:43<12:00,  2.78s/it]
 17%|█▋        | 53/311 [00:46<12:34,  2.93s/it]
 17%|█▋        | 54/311 [00:46<08:55,  2.09s/it]
 18%|█▊        | 55/311 [00:47<06:36,  1.55s/it]
 18%|█▊        | 56/311 [00:47<05:36,  1.32s/it]
 18%|█▊        | 57/311 [00:48<04:04,  1.04it/s]
 19%|█▊        | 58/311 [00:48<03:01,  1.39it/s]
 19%|█▉        | 59/311 [00:48<03:01,  1.39it/s]
 19%|█▉        | 60/311 [00:52<07:00,  1.67s/it]
 20%|█▉        | 61/311 [00:53<05:23,  1.29s/it]
 20%|█▉        | 62/311 [00:54<05:41,  1.37s/it]
 20%|██        | 63/311 [00:54<04:07,  1.00it/s]
 21%|██        | 64/311 [00:55<03:40,  1.12it/s]
 21%|██        | 65/311 [00:55<02:54,  1.41it/s]
 21%|██        | 66/311 [00:58<04:47,  1.17s/it]
 22%|██▏       | 67/311 [00:59<04:30,  1.11s/it]
 22%|██▏       | 68/311 [00:59<03:17,  1.23it/s]
 23%|██▎       | 70/311 [01:00<02:50,  1.41it/s]
 23%|██▎       | 71/311 [01:00<02:44,  1.46it/s]
 23%|██▎       | 72/311 [01:01<02:42,  1.47it/s]
 23%|██▎       | 73/311 [01:03<03:28,  1.14it/s]
 24%|██▍       | 74/311 [01:03<02:56,  1.34it/s]
 24%|██▍       | 75/311 [01:04<03:24,  1.15it/s]
 24%|██▍       | 76/311 [01:04<02:43,  1.44it/s]
 25%|██▍       | 77/311 [01:05<02:14,  1.74it/s]
 25%|██▌       | 78/311 [01:05<02:04,  1.87it/s]
 25%|██▌       | 79/311 [01:05<01:50,  2.11it/s]
 26%|██▌       | 80/311 [01:06<01:39,  2.31it/s]
 26%|██▌       | 81/311 [01:07<02:58,  1.29it/s]
 26%|██▋       | 82/311 [01:11<06:33,  1.72s/it]
 27%|██▋       | 83/311 [01:12<05:21,  1.41s/it]
 27%|██▋       | 84/311 [01:17<09:22,  2.48s/it]
 27%|██▋       | 85/311 [01:21<10:33,  2.80s/it]
 28%|██▊       | 86/311 [01:22<08:58,  2.39s/it]
 28%|██▊       | 87/311 [01:23<07:01,  1.88s/it]
 28%|██▊       | 88/311 [01:23<05:03,  1.36s/it]
 29%|██▊       | 89/311 [01:23<03:39,  1.01it/s]
 29%|██▉       | 90/311 [01:25<04:21,  1.18s/it]
 29%|██▉       | 91/311 [01:25<04:01,  1.10s/it]
 30%|██▉       | 92/311 [01:27<04:24,  1.21s/it]
 30%|██▉       | 93/311 [01:34<11:19,  3.12s/it]
 30%|███       | 94/311 [01:39<12:20,  3.41s/it]
 31%|███       | 95/311 [01:39<09:13,  2.56s/it]
 31%|███       | 96/311 [01:39<06:37,  1.85s/it]
 31%|███       | 97/311 [01:40<05:48,  1.63s/it]
 32%|███▏      | 98/311 [01:49<12:57,  3.65s/it]
 32%|███▏      | 99/311 [01:50<09:50,  2.78s/it]
 32%|███▏      | 100/311 [01:51<08:46,  2.49s/it]
 32%|███▏      | 101/311 [01:53<07:59,  2.28s/it]
 33%|███▎      | 103/311 [01:56<06:44,  1.94s/it]
 33%|███▎      | 104/311 [01:59<07:17,  2.11s/it]
 34%|███▍      | 105/311 [01:59<05:47,  1.69s/it]
 34%|███▍      | 106/311 [02:07<11:29,  3.36s/it]
 34%|███▍      | 107/311 [02:13<13:44,  4.04s/it]
 35%|███▍      | 108/311 [02:15<11:28,  3.39s/it]
 35%|███▌      | 109/311 [02:16<09:34,  2.84s/it]
 35%|███▌      | 110/311 [02:23<13:04,  3.90s/it]
 36%|███▌      | 111/311 [02:24<10:41,  3.21s/it]
 36%|███▌      | 112/311 [02:33<15:52,  4.79s/it]
 36%|███▋      | 113/311 [02:33<11:13,  3.40s/it]
 37%|███▋      | 114/311 [02:37<11:23,  3.47s/it]
 37%|███▋      | 115/311 [02:47<17:40,  5.41s/it]
 37%|███▋      | 116/311 [02:52<18:03,  5.56s/it]
 38%|███▊      | 117/311 [02:53<13:19,  4.12s/it]
 38%|███▊      | 118/311 [02:56<12:12,  3.80s/it]
 38%|███▊      | 119/311 [02:59<11:26,  3.57s/it]
 39%|███▊      | 120/311 [03:03<11:12,  3.52s/it]
 40%|███▉      | 123/311 [03:03<05:02,  1.61s/it]
 40%|███▉      | 124/311 [03:06<06:00,  1.93s/it]
 41%|████      | 127/311 [03:07<03:31,  1.15s/it]
 41%|████      | 128/311 [03:08<03:23,  1.11s/it]
 41%|████▏     | 129/311 [03:16<07:27,  2.46s/it]
 42%|████▏     | 130/311 [03:17<06:23,  2.12s/it]
 42%|████▏     | 131/311 [03:17<05:15,  1.75s/it]
 42%|████▏     | 132/311 [03:19<05:25,  1.82s/it]
 43%|████▎     | 133/311 [03:22<05:47,  1.95s/it]
 43%|████▎     | 134/311 [03:35<15:33,  5.27s/it]
 43%|████▎     | 135/311 [03:36<11:48,  4.02s/it]
 44%|████▎     | 136/311 [03:41<12:25,  4.26s/it]
 44%|████▍     | 138/311 [03:47<10:40,  3.70s/it]
 45%|████▍     | 139/311 [03:49<09:08,  3.19s/it]
 45%|████▌     | 140/311 [03:51<08:40,  3.04s/it]
 45%|████▌     | 141/311 [03:53<07:35,  2.68s/it]
 46%|████▌     | 142/311 [03:54<06:13,  2.21s/it]
 46%|████▌     | 143/311 [03:56<05:53,  2.10s/it]
 46%|████▋     | 144/311 [03:56<04:15,  1.53s/it]
 47%|████▋     | 145/311 [03:57<04:10,  1.51s/it]
 47%|████▋     | 146/311 [04:01<05:41,  2.07s/it]
 47%|████▋     | 147/311 [04:02<04:52,  1.78s/it]
 48%|████▊     | 148/311 [04:02<03:30,  1.29s/it]
 48%|████▊     | 149/311 [04:05<05:09,  1.91s/it]
 48%|████▊     | 150/311 [04:06<03:41,  1.38s/it]
 49%|████▊     | 151/311 [04:07<03:46,  1.42s/it]
 49%|████▉     | 152/311 [04:08<03:05,  1.17s/it]
 49%|████▉     | 153/311 [04:08<02:19,  1.13it/s]
 50%|████▉     | 154/311 [04:08<01:55,  1.36it/s]
 50%|████▉     | 155/311 [04:09<01:35,  1.63it/s]
 50%|█████     | 156/311 [04:09<01:15,  2.04it/s]
 50%|█████     | 157/311 [04:09<01:04,  2.38it/s]
 51%|█████     | 158/311 [04:10<01:10,  2.17it/s]
 51%|█████     | 159/311 [04:11<01:57,  1.29it/s]
 51%|█████▏    | 160/311 [04:11<01:27,  1.73it/s]
 52%|█████▏    | 161/311 [04:13<01:57,  1.28it/s]
 52%|█████▏    | 162/311 [04:13<01:31,  1.64it/s]
 52%|█████▏    | 163/311 [04:15<02:23,  1.03it/s]
 53%|█████▎    | 164/311 [04:15<01:45,  1.39it/s]
 53%|█████▎    | 165/311 [04:22<06:48,  2.80s/it]
 53%|█████▎    | 166/311 [04:24<06:16,  2.59s/it]
 54%|█████▎    | 167/311 [04:25<04:26,  1.85s/it]
 54%|█████▍    | 168/311 [04:25<03:21,  1.41s/it]
 54%|█████▍    | 169/311 [04:26<03:20,  1.41s/it]
 57%|█████▋    | 176/311 [04:27<00:49,  2.73it/s]
 57%|█████▋    | 178/311 [04:27<00:46,  2.89it/s]
 58%|█████▊    | 180/311 [04:28<00:52,  2.49it/s]
 59%|█████▊    | 182/311 [04:30<01:11,  1.80it/s]
 59%|█████▉    | 183/311 [04:32<01:30,  1.41it/s]
 59%|█████▉    | 184/311 [04:32<01:16,  1.66it/s]
 59%|█████▉    | 185/311 [04:32<01:04,  1.96it/s]
 60%|█████▉    | 186/311 [04:32<01:03,  1.97it/s]
 60%|██████    | 187/311 [04:33<01:06,  1.87it/s]
 60%|██████    | 188/311 [04:37<02:53,  1.41s/it]
 61%|██████    | 189/311 [04:38<02:30,  1.23s/it]
 61%|██████    | 190/311 [04:40<03:11,  1.58s/it]
 61%|██████▏   | 191/311 [04:42<03:29,  1.75s/it]
 62%|██████▏   | 192/311 [04:43<02:57,  1.49s/it]
 62%|██████▏   | 193/311 [04:45<02:52,  1.47s/it]
 62%|██████▏   | 194/311 [04:46<02:33,  1.32s/it]
 63%|██████▎   | 195/311 [04:48<03:00,  1.56s/it]
 63%|██████▎   | 196/311 [04:48<02:10,  1.13s/it]
 63%|██████▎   | 197/311 [04:49<02:21,  1.24s/it]
 64%|██████▎   | 198/311 [04:51<02:17,  1.22s/it]
 64%|██████▍   | 199/311 [04:51<01:39,  1.12it/s]
 64%|██████▍   | 200/311 [04:51<01:13,  1.51it/s]
 65%|██████▍   | 201/311 [04:51<00:57,  1.92it/s]
 65%|██████▍   | 202/311 [04:53<01:49,  1.00s/it]
 65%|██████▌   | 203/311 [04:54<01:38,  1.09it/s]
 66%|██████▌   | 204/311 [04:59<04:02,  2.26s/it]
 66%|██████▌   | 205/311 [05:00<03:18,  1.87s/it]
 66%|██████▌   | 206/311 [05:05<05:03,  2.89s/it]
 67%|██████▋   | 208/311 [05:06<02:46,  1.61s/it]
 67%|██████▋   | 209/311 [05:06<02:09,  1.27s/it]
 68%|██████▊   | 210/311 [05:07<02:13,  1.32s/it]
 68%|██████▊   | 211/311 [05:08<01:47,  1.07s/it]
 68%|██████▊   | 212/311 [05:12<03:18,  2.01s/it]
 68%|██████▊   | 213/311 [05:17<04:32,  2.78s/it]
 69%|██████▉   | 215/311 [05:18<02:52,  1.80s/it]
 69%|██████▉   | 216/311 [05:23<03:58,  2.51s/it]
 70%|██████▉   | 217/311 [05:26<04:22,  2.79s/it]
 70%|███████   | 218/311 [05:27<03:25,  2.20s/it]
 70%|███████   | 219/311 [05:30<03:35,  2.34s/it]
 71%|███████   | 220/311 [05:30<02:42,  1.79s/it]
 71%|███████   | 221/311 [05:32<02:49,  1.89s/it]
 71%|███████▏  | 222/311 [05:33<02:17,  1.55s/it]
 72%|███████▏  | 223/311 [05:34<02:07,  1.45s/it]
 72%|███████▏  | 224/311 [05:34<01:31,  1.06s/it]
 72%|███████▏  | 225/311 [05:38<02:35,  1.81s/it]
 73%|███████▎  | 226/311 [05:43<03:59,  2.82s/it]
 73%|███████▎  | 227/311 [05:48<04:36,  3.30s/it]
 73%|███████▎  | 228/311 [05:48<03:21,  2.43s/it]
 74%|███████▎  | 229/311 [05:49<02:48,  2.05s/it]
 74%|███████▍  | 230/311 [05:51<02:45,  2.04s/it]
 74%|███████▍  | 231/311 [05:53<02:41,  2.01s/it]
 75%|███████▍  | 232/311 [05:54<02:14,  1.71s/it]
 75%|███████▍  | 233/311 [05:54<01:37,  1.25s/it]
 75%|███████▌  | 234/311 [05:57<02:03,  1.61s/it]
 76%|███████▌  | 235/311 [05:57<01:32,  1.22s/it]
 76%|███████▌  | 236/311 [05:59<01:53,  1.52s/it]
 77%|███████▋  | 238/311 [06:02<01:49,  1.50s/it]
 77%|███████▋  | 239/311 [06:03<01:33,  1.29s/it]
 77%|███████▋  | 240/311 [06:05<01:54,  1.61s/it]
 78%|███████▊  | 243/311 [06:06<00:53,  1.26it/s]
 78%|███████▊  | 244/311 [06:06<00:55,  1.21it/s]
 79%|███████▉  | 245/311 [06:07<00:44,  1.49it/s]
 79%|███████▉  | 246/311 [06:07<00:35,  1.85it/s]
 79%|███████▉  | 247/311 [06:07<00:29,  2.14it/s]
 80%|███████▉  | 248/311 [06:07<00:24,  2.57it/s]
 80%|████████  | 250/311 [06:08<00:25,  2.41it/s]
 81%|████████  | 251/311 [06:11<00:59,  1.00it/s]
 81%|████████  | 252/311 [06:14<01:25,  1.46s/it]
 81%|████████▏ | 253/311 [06:16<01:33,  1.61s/it]
 82%|████████▏ | 254/311 [06:16<01:12,  1.28s/it]
 82%|████████▏ | 255/311 [06:19<01:31,  1.64s/it]
 82%|████████▏ | 256/311 [06:19<01:15,  1.38s/it]
 83%|████████▎ | 257/311 [06:20<01:08,  1.27s/it]
 83%|████████▎ | 258/311 [06:22<01:16,  1.45s/it]
 83%|████████▎ | 259/311 [06:24<01:19,  1.54s/it]
 84%|████████▎ | 260/311 [06:27<01:43,  2.04s/it]
 84%|████████▍ | 261/311 [06:33<02:39,  3.20s/it]
 84%|████████▍ | 262/311 [06:35<02:09,  2.65s/it]
 85%|████████▍ | 263/311 [06:35<01:33,  1.94s/it]
 85%|████████▍ | 264/311 [06:37<01:35,  2.03s/it]
 86%|████████▌ | 266/311 [06:44<02:00,  2.69s/it]
 86%|████████▌ | 267/311 [06:44<01:32,  2.10s/it]
 86%|████████▌ | 268/311 [06:47<01:41,  2.36s/it]
 86%|████████▋ | 269/311 [06:51<01:55,  2.76s/it]
 87%|████████▋ | 270/311 [07:04<03:47,  5.56s/it]
 87%|████████▋ | 271/311 [07:05<02:51,  4.28s/it]
 87%|████████▋ | 272/311 [07:15<03:51,  5.93s/it]
 88%|████████▊ | 273/311 [07:23<04:01,  6.37s/it]
 88%|████████▊ | 274/311 [07:52<08:02, 13.04s/it]
 88%|████████▊ | 275/311 [07:53<05:47,  9.65s/it]
 89%|████████▊ | 276/311 [07:54<04:04,  6.97s/it]
 89%|████████▉ | 277/311 [07:55<03:02,  5.36s/it]
 89%|████████▉ | 278/311 [08:04<03:28,  6.31s/it]
 90%|████████▉ | 279/311 [08:05<02:34,  4.82s/it]
 90%|█████████ | 280/311 [09:00<10:16, 19.88s/it]
 90%|█████████ | 281/311 [09:03<07:20, 14.67s/it]
 91%|█████████ | 282/311 [09:12<06:20, 13.13s/it]
 91%|█████████ | 283/311 [09:14<04:28,  9.60s/it]
 91%|█████████▏| 284/311 [09:19<03:45,  8.35s/it]
 92%|█████████▏| 285/311 [10:09<09:02, 20.86s/it]
 92%|█████████▏| 286/311 [10:18<07:08, 17.13s/it]
 93%|█████████▎| 288/311 [10:18<03:36,  9.42s/it]
 93%|█████████▎| 289/311 [10:20<02:45,  7.54s/it]
 93%|█████████▎| 290/311 [10:27<02:35,  7.42s/it]
 94%|█████████▎| 291/311 [10:28<01:49,  5.50s/it]
 94%|█████████▍| 292/311 [10:29<01:22,  4.32s/it]
 94%|█████████▍| 293/311 [10:41<01:58,  6.60s/it]
 95%|█████████▍| 294/311 [11:17<04:15, 15.04s/it]
 95%|█████████▍| 295/311 [11:22<03:11, 11.99s/it]
 95%|█████████▌| 296/311 [11:23<02:14,  8.96s/it]
 96%|█████████▌| 298/311 [11:24<01:06,  5.11s/it]
 96%|█████████▌| 299/311 [12:14<03:12, 16.07s/it]
 96%|█████████▋| 300/311 [12:25<02:42, 14.73s/it]
 97%|█████████▋| 301/311 [12:47<02:48, 16.81s/it]
 97%|█████████▋| 302/311 [12:51<01:56, 12.99s/it]
 97%|█████████▋| 303/311 [12:51<01:14,  9.33s/it]
 98%|█████████▊| 304/311 [14:29<04:05, 35.10s/it]
 98%|█████████▊| 305/311 [14:41<02:50, 28.40s/it]
 99%|█████████▉| 308/311 [17:08<01:59, 39.72s/it]
 99%|█████████▉| 309/311 [19:57<02:13, 66.88s/it]
100%|█████████▉| 310/311 [20:02<00:52, 52.58s/it]
100%|██████████| 311/311 [20:04<00:00, 40.23s/it]
100%|██████████| 311/311 [20:04<00:00,  3.87s/it]
+
  0%|          | 0/311 [00:00<?, ?it/s]
  1%|          | 3/311 [00:35<1:01:10, 11.92s/it]
  2%|▏         | 6/311 [01:20<1:09:50, 13.74s/it]
  2%|▏         | 7/311 [01:20<54:30, 10.76s/it]  
  3%|▎         | 8/311 [01:25<46:22,  9.18s/it]
  3%|▎         | 9/311 [02:26<42:40,  8.48s/it]
  3%|▎         | 10/311 [02:48<2:01:24, 24.20s/it]
  4%|▎         | 11/311 [04:38<2:10:03, 26.01s/it]
  4%|▍         | 12/311 [04:39<3:39:05, 43.97s/it]
  4%|▍         | 13/311 [06:51<3:23:43, 41.02s/it]
  5%|▍         | 14/311 [09:42<6:33:40, 79.53s/it]
  5%|▍         | 15/311 [09:42<6:55:56, 84.31s/it]
  5%|▌         | 16/311 [11:27<6:08:07, 74.87s/it]
  5%|▌         | 17/311 [12:01<6:24:48, 78.53s/it]
  6%|▌         | 18/311 [12:19<4:32:00, 55.70s/it]
  6%|▌         | 19/311 [12:34<3:34:32, 44.08s/it]
  6%|▋         | 20/311 [13:36<3:02:48, 37.69s/it]
  7%|▋         | 21/311 [14:09<3:47:08, 47.00s/it]
  7%|▋         | 22/311 [14:25<3:27:05, 43.00s/it]
  7%|▋         | 23/311 [15:04<2:40:45, 33.49s/it]
  8%|▊         | 24/311 [15:13<2:38:01, 33.04s/it]
  8%|▊         | 25/311 [15:21<2:08:12, 26.90s/it]
  8%|▊         | 26/311 [15:41<1:35:06, 20.02s/it]
  9%|▊         | 27/311 [15:44<1:33:32, 19.76s/it]
  9%|▉         | 28/311 [15:45<1:06:50, 14.17s/it]
  9%|▉         | 29/311 [15:46<47:20, 10.07s/it]  
 10%|▉         | 30/311 [15:48<35:47,  7.64s/it]
100%|█████████▉| 310/311 [15:48<00:00, 15.45it/s]
100%|██████████| 311/311 [15:48<00:00,  3.05s/it]
+Total results for interface_protein_dna: 311
+
  0%|          | 0/311 [00:00<?, ?it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain B, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
  0%|          | 1/311 [00:00<01:13,  4.24it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain C, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain D, native chain E2: 9 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain C, native chain E1: 5 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 5 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 8 mismatches, Model chain B, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 3 mismatches, Model chain B, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8pw0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 201, in dockq
+    best_result, best_dockq = run_chain_map(best_mapping)
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 301, in calc_DockQ
+    aligned_sample_2, aligned_ref_2 = get_aligned_residues(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 124, in get_aligned_residues
+    rB = next(resB)
+StopIteration
+
+
  4%|▎         | 11/311 [00:00<00:12, 23.62it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 8 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 8 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+
  5%|▍         | 15/311 [00:00<00:10, 27.52it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 3 mismatches, Model chain C, native chain E4: 3 mismatches, Model chain C, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain B, native chain E2: 1 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+
  7%|▋         | 21/311 [00:00<00:08, 32.52it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 9 mismatches, Model chain A, native chain E2_2: 9 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 9 mismatches, Model chain F, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 9 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+
 10%|▉         | 30/311 [00:00<00:06, 41.87it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3_1: 7 mismatches, Model chain B, native chain E3_2: 7 mismatches, Model chain B, native chain E3_3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2_1: 7 mismatches, Model chain C, native chain E2_2: 7 mismatches, Model chain C, native chain E2_3: 7 mismatches
+if they should be treated as homologous.
+
 11%|█▏        | 35/311 [00:01<00:06, 41.74it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain C, native chain E1_3: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E1_1: 6 mismatches, Model chain C-2, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain C-2, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain C-2, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain D, native chain E1_3: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D-2, native chain E1_1: 3 mismatches, Model chain D-2, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain D-2, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain D-2, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain B, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+
 13%|█▎        | 40/311 [00:01<00:07, 35.07it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain D, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 4 mismatches, Model chain C, native chain E2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3_1: 8 mismatches, Model chain B, native chain E3_2: 8 mismatches, Model chain B, native chain E3_3: 8 mismatches, Model chain B, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+
 15%|█▌        | 48/311 [00:01<00:05, 44.45it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain C, native chain E3: 6 mismatches, Model chain C, native chain E4: 6 mismatches, Model chain E, native chain E4: 4 mismatches
+if they should be treated as homologous.
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 8 mismatches, Model chain D, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain D, native chain E2_2: 8 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8sv3-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 621, in run_on_all_native_interfaces
+    native_chains = tuple([native_structure[chain] for chain in chain_pair])
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 621, in <listcomp>
+    native_chains = tuple([native_structure[chain] for chain in chain_pair])
+  File "/opt/foldbench-env/lib/python3.9/site-packages/Bio/PDB/Entity.py", line 65, in __getitem__
+    return self.child_dict[id]
+KeyError: 'D'
+
+
 17%|█▋        | 53/311 [00:01<00:07, 35.25it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 4 mismatches, Model chain F, native chain E1_2: 4 mismatches, Model chain F, native chain E2_1: 6 mismatches, Model chain F, native chain E2_2: 6 mismatches, Model chain C, native chain E3: 6 mismatches, Model chain F, native chain E3: 4 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches, Model chain A, native chain E3_3: 9 mismatches, Model chain A, native chain E3_4: 9 mismatches, Model chain A, native chain E3_5: 9 mismatches, Model chain A, native chain E3_6: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches, Model chain B, native chain E3_3: 9 mismatches, Model chain B, native chain E3_4: 9 mismatches, Model chain B, native chain E3_5: 9 mismatches, Model chain B, native chain E3_6: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 8 mismatches, Model chain I, native chain E1_2: 8 mismatches, Model chain I, native chain E1_3: 8 mismatches, Model chain I, native chain E1_4: 8 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain I, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain I, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain I, native chain E2_3: 5 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain I, native chain E2_4: 5 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain D, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain I, native chain E1_1: 8 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain I, native chain E1_2: 8 mismatches, Model chain B, native chain E1_3: 2 mismatches, Model chain I, native chain E1_3: 8 mismatches, Model chain B, native chain E1_4: 2 mismatches, Model chain I, native chain E1_4: 8 mismatches, Model chain I, native chain E2_1: 5 mismatches, Model chain I, native chain E2_2: 5 mismatches, Model chain I, native chain E2_3: 5 mismatches, Model chain I, native chain E2_4: 5 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain B, native chain E3_2: 5 mismatches, Model chain B, native chain E3_3: 5 mismatches, Model chain B, native chain E3_4: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches
+if they should be treated as homologous.
+
 19%|█▊        | 58/311 [00:01<00:09, 27.16it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain B, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain B, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 4 mismatches, Model chain B, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain B, native chain E1_3: 6 mismatches, Model chain B, native chain E1_4: 6 mismatches, Model chain B, native chain E1_5: 6 mismatches, Model chain B, native chain E1_6: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E2_3: 6 mismatches, Model chain A, native chain E2_4: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain B, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain B, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain B, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches, Model chain B, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 8 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain C, native chain E1_3: 8 mismatches, Model chain C, native chain E1_4: 8 mismatches, Model chain C, native chain E1_5: 8 mismatches, Model chain C, native chain E1_6: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain C, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain C, native chain E2_2: 8 mismatches, Model chain A, native chain E2_3: 6 mismatches, Model chain C, native chain E2_3: 8 mismatches, Model chain A, native chain E2_4: 6 mismatches, Model chain C, native chain E2_4: 8 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain C, native chain E1_3: 4 mismatches, Model chain C, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain C, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain C, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain C, native chain E2_3: 1 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain C, native chain E2_4: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+
 23%|██▎       | 70/311 [00:01<00:05, 43.16it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain C, native chain E1: 6 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches
+if they should be treated as homologous.
+
 24%|██▍       | 76/311 [00:02<00:05, 42.24it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 6 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain A, native chain E2_3: 8 mismatches, Model chain I, native chain E2_3: 8 mismatches, Model chain A, native chain E2_4: 8 mismatches, Model chain I, native chain E2_4: 8 mismatches, Model chain A, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 6 mismatches, Model chain A, native chain E3_3: 6 mismatches, Model chain A, native chain E3_4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 8 mismatches, Model chain I, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 8 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain B, native chain E1_3: 8 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain B, native chain E1_4: 8 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain I, native chain E2_3: 8 mismatches, Model chain I, native chain E2_4: 8 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 9 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain A, native chain E3: 9 mismatches
+if they should be treated as homologous.
+
 26%|██▋       | 82/311 [00:02<00:05, 39.20it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain C, native chain E1: 9 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain C, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8q43-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 305, in calc_DockQ
+    sample_res_distances = get_residue_distances(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 163, in get_residue_distances
+    model_res_distances = residue_distances(
+  File "/opt/foldbench/evaluation/DockQv2/operations_nocy.py", line 29, in residue_distances
+    atom_distances = get_distances_across_chains(atom_coordinates1, atom_coordinates2)
+  File "/opt/foldbench/evaluation/DockQv2/operations_nocy.py", line 6, in get_distances_across_chains
+    distances = ((model_A_atoms[:, None] - model_B_atoms[None, :]) ** 2).sum(-1)
+ValueError: operands could not be broadcast together with shapes (3390,1,3) (1,0) 
+
+
 28%|██▊       | 87/311 [00:02<00:06, 35.48it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain C, native chain E2_1: 6 mismatches, Model chain C, native chain E2_2: 6 mismatches
+if they should be treated as homologous.
+
 30%|██▉       | 93/311 [00:02<00:05, 39.39it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+
 32%|███▏      | 98/311 [00:02<00:06, 32.73it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 5 mismatches, Model chain C, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyn-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain D, native chain E1_3: 8 mismatches, Model chain A-2, native chain E2: 3 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A-2, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyp-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 5 mismatches, Model chain C, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain C, native chain E1_3: 3 mismatches, Model chain A-2, native chain E2: 3 mismatches, Model chain A-2, native chain E3: 8 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyo-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+
 33%|███▎      | 104/311 [00:02<00:05, 38.01it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyp-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyn-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E1_1: 5 mismatches, Model chain C-2, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain D, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain D, native chain E2_2: 8 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+
 35%|███▌      | 109/311 [00:03<00:06, 32.23it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 2 mismatches, Model chain D, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain D, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain D, native chain E5: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain C, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain C, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain C, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain F, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain F, native chain E3: 3 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain F, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches
+if they should be treated as homologous.
+
 37%|███▋      | 116/311 [00:03<00:05, 37.95it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain E, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain E, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain E, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 3 mismatches, Model chain A, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E1: 1 mismatches, Model chain C, native chain E1: 9 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 39%|███▉      | 121/311 [00:03<00:06, 28.19it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain C, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain C, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain D, native chain E2_1: 9 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain D, native chain E2_2: 9 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+
 40%|████      | 125/311 [00:03<00:07, 24.94it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
 42%|████▏     | 130/311 [00:03<00:06, 29.08it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain C, native chain E1_3: 1 mismatches, Model chain C, native chain E1_4: 1 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain C, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain C, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain C, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain C, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain B, native chain E1_3: 2 mismatches, Model chain B, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain B, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain B, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches, Model chain B, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
 43%|████▎     | 134/311 [00:04<00:08, 21.98it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain A, native chain E2_4: 4 mismatches
+if they should be treated as homologous.
+
 44%|████▍     | 138/311 [00:04<00:06, 24.80it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+
 46%|████▌     | 142/311 [00:04<00:09, 17.77it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 9 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
 48%|████▊     | 149/311 [00:04<00:06, 23.73it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 3 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain C, native chain E2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 3 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain B, native chain E3: 6 mismatches, Model chain D, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 5 mismatches, Model chain D, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 49%|████▉     | 153/311 [00:05<00:06, 23.94it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 2 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain C, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches, Model chain C, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 1 mismatches, Model chain E, native chain E1_2: 1 mismatches, Model chain E, native chain E2: 1 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain E, native chain E3: 1 mismatches, Model chain B, native chain E4: 1 mismatches, Model chain B, native chain E5: 2 mismatches, Model chain E, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain B, native chain E3: 6 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain D, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches, Model chain D, native chain E5: 2 mismatches
+if they should be treated as homologous.
+
 50%|█████     | 157/311 [00:05<00:06, 24.49it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain C, native chain E2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 5 mismatches, Model chain D, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 9 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain C, native chain E1_4: 9 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain C, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain C, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain F, native chain E3: 2 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain F, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches
+if they should be treated as homologous.
+
 51%|█████▏    | 160/311 [00:05<00:06, 24.48it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 5 mismatches, Model chain E, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+
 53%|█████▎    | 166/311 [00:05<00:04, 31.53it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain D, native chain E1_3: 6 mismatches, Model chain D, native chain E1_4: 6 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain D, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain D, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain E, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain E, native chain E1_2: 5 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain B, native chain E3_1: 6 mismatches, Model chain B, native chain E3_2: 6 mismatches
+if they should be treated as homologous.
+
 55%|█████▍    | 171/311 [00:05<00:04, 28.97it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 7 mismatches, Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain B, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches
+if they should be treated as homologous.
+
 58%|█████▊    | 180/311 [00:05<00:03, 39.76it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches
+if they should be treated as homologous.
+
 59%|█████▉    | 185/311 [00:05<00:03, 37.99it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain D, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain D, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain C, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain C, native chain E3_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain B, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+
 62%|██████▏   | 192/311 [00:06<00:02, 39.73it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain D, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain C, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+
 63%|██████▎   | 197/311 [00:06<00:03, 36.09it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 9 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain C, native chain E1_4: 9 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches, Model chain A, native chain E3_3: 9 mismatches, Model chain A, native chain E3_4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain C, native chain E1_1: 9 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain B, native chain E1_3: 3 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain B, native chain E1_4: 3 mismatches, Model chain C, native chain E1_4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E1_3: 4 mismatches, Model chain E, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain E, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain E, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain E, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 2 mismatches, Model chain E, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain D, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E1_3: 4 mismatches, Model chain E, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain E, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain E, native chain E3_2: 6 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain E, native chain E3_3: 6 mismatches, Model chain A, native chain E3_4: 2 mismatches, Model chain E, native chain E3_4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
 65%|██████▍   | 201/311 [00:06<00:03, 31.71it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain F, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain F, native chain E2_2: 6 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain F, native chain E2_3: 6 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain F, native chain E2_4: 6 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain A, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 7 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain D, native chain E3: 4 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain D, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 4 mismatches, Model chain C, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain F, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain F, native chain E2_2: 4 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain F, native chain E2_3: 4 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain F, native chain E2_4: 4 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain A, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain E, native chain E3: 4 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain E, native chain E4: 4 mismatches, Model chain E, native chain E6: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+
 67%|██████▋   | 208/311 [00:06<00:02, 35.34it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain D, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain D, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
 68%|██████▊   | 213/311 [00:06<00:02, 38.24it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 3 mismatches, Model chain E, native chain E1_2: 3 mismatches, Model chain E, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+
 71%|███████   | 220/311 [00:06<00:02, 42.39it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 8 mismatches, Model chain C, native chain E2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 2 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 3 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain C, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain C, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+
 72%|███████▏  | 225/311 [00:07<00:02, 34.09it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain F, native chain E1_5: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain F, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain F, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain F, native chain E2_3: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain F, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain F, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain F, native chain E3_3: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8rpx-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 301, in calc_DockQ
+    aligned_sample_2, aligned_ref_2 = get_aligned_residues(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 124, in get_aligned_residues
+    rB = next(resB)
+StopIteration
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 75%|███████▌  | 234/311 [00:07<00:01, 39.72it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 9 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 4 mismatches, Model chain G, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain G, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain G, native chain E2_3: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain F, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain F, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 3 mismatches, Model chain A, native chain E3_3: 3 mismatches, Model chain A, native chain E3_4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain F, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2_1: 3 mismatches, Model chain F, native chain E2_2: 3 mismatches, Model chain B, native chain E3_1: 2 mismatches, Model chain B, native chain E3_2: 2 mismatches, Model chain B, native chain E3_3: 2 mismatches, Model chain B, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 77%|███████▋  | 239/311 [00:07<00:02, 35.02it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 9 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 3 mismatches, Model chain E, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain E, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain E, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+
 79%|███████▉  | 246/311 [00:07<00:01, 39.65it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E1: 1 mismatches, Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain F, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2_1: 1 mismatches, Model chain F, native chain E2_2: 1 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain B, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+
 81%|████████  | 252/311 [00:07<00:01, 43.81it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 83%|████████▎ | 257/311 [00:07<00:01, 40.63it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 1 mismatches, Model chain D, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain B, native chain E1_3: 3 mismatches, Model chain B, native chain E1_4: 3 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 1 mismatches, Model chain A, native chain E2_4: 1 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain B, native chain E3_2: 5 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain B, native chain E3_3: 5 mismatches, Model chain A, native chain E3_4: 1 mismatches, Model chain B, native chain E3_4: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain C, native chain E1_3: 1 mismatches, Model chain C, native chain E1_4: 1 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain C, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain C, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 1 mismatches, Model chain C, native chain E2_3: 5 mismatches, Model chain A, native chain E2_4: 1 mismatches, Model chain C, native chain E2_4: 5 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 1 mismatches, Model chain E, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain E, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 3 mismatches, Model chain E, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain C, native chain E1: 8 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 8 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain C, native chain E1_1: 8 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain C, native chain E1_3: 8 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain C, native chain E1_4: 8 mismatches, Model chain C, native chain E2_1: 4 mismatches, Model chain C, native chain E2_2: 4 mismatches, Model chain C, native chain E2_3: 4 mismatches, Model chain C, native chain E2_4: 4 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+
 84%|████████▍ | 262/311 [00:07<00:01, 34.04it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain C, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 4 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
 87%|████████▋ | 272/311 [00:08<00:00, 46.73it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain D, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain D, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 9 mismatches, Model chain D, native chain E1_2: 9 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain C, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain C, native chain E1_3: 2 mismatches, Model chain C, native chain E1_4: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
 89%|████████▉ | 278/311 [00:08<00:00, 46.10it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain J, native chain E2_1: 4 mismatches, Model chain J, native chain E2_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E3_1: 4 mismatches, Model chain I, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain J, native chain E1_1: 9 mismatches, Model chain J, native chain E1_2: 9 mismatches, Model chain J, native chain E1_3: 9 mismatches, Model chain J, native chain E1_4: 9 mismatches, Model chain J, native chain E2_1: 8 mismatches, Model chain J, native chain E2_2: 8 mismatches, Model chain J, native chain E3: 5 mismatches, Model chain J, native chain E4: 9 mismatches, Model chain J, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain H, native chain E2_1: 8 mismatches, Model chain H, native chain E2_2: 8 mismatches, Model chain H, native chain E3: 7 mismatches, Model chain H, native chain E5: 8 mismatches, Model chain H, native chain E6: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain D, native chain E1_3: 4 mismatches, Model chain D, native chain E1_4: 4 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 8 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain G, native chain E1_1: 7 mismatches, Model chain G, native chain E1_2: 7 mismatches, Model chain G, native chain E1_3: 7 mismatches, Model chain G, native chain E1_4: 7 mismatches, Model chain G, native chain E2_1: 6 mismatches, Model chain G, native chain E2_2: 6 mismatches, Model chain G, native chain E4: 8 mismatches, Model chain G, native chain E5: 5 mismatches, Model chain G, native chain E6: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 6 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain I, native chain E3: 7 mismatches, Model chain I, native chain E4: 5 mismatches, Model chain I, native chain E6: 5 mismatches
+if they should be treated as homologous.
+
 92%|█████████▏| 286/311 [00:08<00:00, 51.10it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain C, native chain E1_3: 7 mismatches, Model chain C, native chain E1_4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B-2, native chain E3_1: 2 mismatches, Model chain B-2, native chain E3_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E2_1: 2 mismatches, Model chain C-2, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8cs0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+
 94%|█████████▍| 292/311 [00:08<00:00, 41.17it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8cs0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 97%|█████████▋| 303/311 [00:08<00:00, 44.07it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 99%|█████████▉| 308/311 [00:08<00:00, 39.04it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 3 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain A, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 9 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain A, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
100%|██████████| 311/311 [00:09<00:00, 31.67it/s]
+Total results for interface_protein_dna: 300
+
  0%|          | 0/531 [00:00<?, ?it/s]
 18%|█▊        | 98/531 [00:00<00:04, 101.43it/s]
 21%|██        | 109/531 [00:03<00:18, 22.77it/s]
 22%|██▏       | 116/531 [00:05<00:25, 16.16it/s]
 22%|██▏       | 119/531 [00:06<00:31, 13.12it/s]
 24%|██▎       | 125/531 [00:07<00:37, 10.92it/s]
 24%|██▍       | 127/531 [00:09<01:04,  6.30it/s]
 24%|██▍       | 128/531 [00:09<01:06,  6.05it/s]
 24%|██▍       | 129/531 [00:09<01:11,  5.60it/s]
 24%|██▍       | 130/531 [00:10<01:28,  4.52it/s]
 28%|██▊       | 147/531 [00:10<00:33, 11.49it/s]
 28%|██▊       | 149/531 [00:11<00:42,  8.97it/s]
 28%|██▊       | 151/531 [00:12<01:06,  5.70it/s]
 29%|██▉       | 153/531 [00:15<02:00,  3.13it/s]
 29%|██▉       | 154/531 [00:15<01:53,  3.32it/s]
 32%|███▏      | 170/531 [00:15<00:42,  8.58it/s]
 33%|███▎      | 176/531 [00:15<00:32, 10.90it/s]
 34%|███▎      | 179/531 [00:18<01:23,  4.21it/s]
 35%|███▍      | 184/531 [00:20<01:21,  4.24it/s]
 35%|███▌      | 186/531 [00:20<01:29,  3.87it/s]
 35%|███▌      | 187/531 [00:22<02:03,  2.78it/s]
 35%|███▌      | 188/531 [00:22<01:54,  3.00it/s]
 40%|███▉      | 210/531 [00:22<00:25, 12.60it/s]
 40%|████      | 215/531 [00:24<00:41,  7.65it/s]
 41%|████      | 219/531 [00:24<00:41,  7.53it/s]
 42%|████▏     | 223/531 [00:26<00:56,  5.48it/s]
 42%|████▏     | 225/531 [00:27<01:08,  4.47it/s]
 43%|████▎     | 227/531 [00:27<01:12,  4.17it/s]
 44%|████▍     | 234/531 [00:28<00:42,  6.98it/s]
 45%|████▍     | 238/531 [00:28<00:47,  6.16it/s]
 45%|████▌     | 241/531 [00:29<00:41,  7.02it/s]
 46%|████▌     | 243/531 [00:29<00:44,  6.44it/s]
 46%|████▋     | 246/531 [00:30<00:53,  5.36it/s]
 47%|████▋     | 252/531 [00:31<00:43,  6.40it/s]
 48%|████▊     | 253/531 [00:31<00:49,  5.66it/s]
 48%|████▊     | 254/531 [00:33<01:52,  2.46it/s]
 48%|████▊     | 255/531 [00:34<02:21,  1.95it/s]
 48%|████▊     | 256/531 [00:35<02:21,  1.95it/s]
 52%|█████▏    | 276/531 [00:35<00:27,  9.16it/s]
 52%|█████▏    | 278/531 [00:37<00:46,  5.47it/s]
 53%|█████▎    | 279/531 [00:38<00:55,  4.51it/s]
 53%|█████▎    | 280/531 [00:38<00:53,  4.66it/s]
 55%|█████▍    | 290/531 [00:38<00:25,  9.37it/s]
 55%|█████▍    | 292/531 [00:38<00:27,  8.79it/s]
 56%|█████▌    | 297/531 [00:39<00:21, 10.83it/s]
 56%|█████▋    | 299/531 [00:39<00:24,  9.50it/s]
 57%|█████▋    | 301/531 [00:39<00:26,  8.64it/s]
 57%|█████▋    | 303/531 [00:41<01:04,  3.54it/s]
 57%|█████▋    | 304/531 [00:42<01:25,  2.65it/s]
 57%|█████▋    | 305/531 [00:43<01:33,  2.41it/s]
 61%|██████    | 325/531 [00:43<00:16, 12.24it/s]
 63%|██████▎   | 337/531 [00:45<00:24,  8.03it/s]
 64%|██████▍   | 342/531 [00:46<00:27,  6.90it/s]
 65%|██████▍   | 345/531 [00:46<00:24,  7.67it/s]
 66%|██████▌   | 348/531 [00:47<00:22,  8.22it/s]
 66%|██████▌   | 351/531 [00:49<00:43,  4.19it/s]
 66%|██████▋   | 353/531 [00:50<00:53,  3.35it/s]
 69%|██████▊   | 364/531 [00:51<00:29,  5.57it/s]
 69%|██████▉   | 366/531 [00:52<00:35,  4.71it/s]
 71%|███████   | 376/531 [00:53<00:23,  6.73it/s]
 72%|███████▏  | 380/531 [00:53<00:22,  6.68it/s]
 72%|███████▏  | 381/531 [00:55<00:42,  3.51it/s]
 74%|███████▍  | 392/531 [00:56<00:22,  6.18it/s]
 75%|███████▍  | 397/531 [00:56<00:17,  7.69it/s]
 75%|███████▌  | 399/531 [00:56<00:17,  7.52it/s]
 76%|███████▌  | 401/531 [00:57<00:20,  6.44it/s]
 76%|███████▌  | 403/531 [00:59<00:40,  3.16it/s]
 76%|███████▌  | 404/531 [00:59<00:41,  3.03it/s]
 79%|███████▊  | 417/531 [01:02<00:30,  3.79it/s]
 79%|███████▊  | 418/531 [01:03<00:31,  3.58it/s]
 79%|███████▉  | 419/531 [01:05<00:46,  2.43it/s]
 79%|███████▉  | 420/531 [01:05<00:46,  2.38it/s]
 84%|████████▍ | 448/531 [01:05<00:06, 11.87it/s]
 85%|████████▌ | 452/531 [01:06<00:07, 10.72it/s]
 86%|████████▌ | 455/531 [01:07<00:07,  9.50it/s]
 86%|████████▋ | 459/531 [01:07<00:08,  8.35it/s]
 87%|████████▋ | 461/531 [01:08<00:09,  7.29it/s]
 87%|████████▋ | 464/531 [01:09<00:15,  4.41it/s]
 89%|████████▉ | 474/531 [01:10<00:06,  8.32it/s]
 90%|████████▉ | 477/531 [01:11<00:08,  6.41it/s]
 91%|█████████ | 484/531 [01:11<00:05,  9.00it/s]
 92%|█████████▏| 487/531 [01:11<00:04,  9.91it/s]
 92%|█████████▏| 490/531 [01:11<00:04,  9.25it/s]
 93%|█████████▎| 492/531 [01:12<00:03,  9.87it/s]
 93%|█████████▎| 494/531 [01:12<00:03, 10.72it/s]
 93%|█████████▎| 496/531 [01:12<00:04,  7.19it/s]
 94%|█████████▍| 498/531 [01:13<00:07,  4.55it/s]
 94%|█████████▍| 499/531 [01:14<00:07,  4.17it/s]
 94%|█████████▍| 500/531 [01:14<00:08,  3.46it/s]
 95%|█████████▍| 503/531 [01:15<00:06,  4.09it/s]
 95%|█████████▍| 504/531 [01:15<00:06,  4.40it/s]
 95%|█████████▌| 505/531 [01:15<00:05,  4.51it/s]
 95%|█████████▌| 506/531 [01:16<00:07,  3.37it/s]
 95%|█████████▌| 507/531 [01:16<00:08,  2.84it/s]
 96%|█████████▌| 508/531 [01:17<00:13,  1.68it/s]
 96%|█████████▌| 509/531 [01:18<00:14,  1.50it/s]
 96%|█████████▌| 510/531 [01:18<00:10,  1.93it/s]
 96%|█████████▋| 512/531 [01:19<00:08,  2.29it/s]
 97%|█████████▋| 513/531 [01:21<00:12,  1.43it/s]
 97%|█████████▋| 514/531 [01:22<00:13,  1.22it/s]
 97%|█████████▋| 515/531 [01:23<00:16,  1.06s/it]
 97%|█████████▋| 516/531 [01:25<00:17,  1.16s/it]
 97%|█████████▋| 517/531 [01:28<00:22,  1.64s/it]
 98%|█████████▊| 518/531 [01:30<00:22,  1.74s/it]
 98%|█████████▊| 519/531 [01:31<00:17,  1.47s/it]
 98%|█████████▊| 520/531 [01:38<00:34,  3.10s/it]
 98%|█████████▊| 521/531 [01:38<00:23,  2.38s/it]
 98%|█████████▊| 522/531 [01:40<00:20,  2.25s/it]
 98%|█████████▊| 523/531 [01:42<00:15,  1.97s/it]
 99%|█████████▊| 524/531 [01:43<00:13,  1.95s/it]
 99%|█████████▉| 525/531 [01:44<00:09,  1.50s/it]
 99%|█████████▉| 526/531 [01:52<00:16,  3.40s/it]
 99%|█████████▉| 527/531 [01:57<00:15,  3.91s/it]
 99%|█████████▉| 528/531 [02:06<00:16,  5.40s/it]
100%|█████████▉| 529/531 [02:14<00:12,  6.15s/it]
100%|█████████▉| 530/531 [02:20<00:06,  6.11s/it]
100%|██████████| 531/531 [02:31<00:00,  7.76s/it]
100%|██████████| 531/531 [02:31<00:00,  3.50it/s]
+
  0%|          | 0/531 [00:00<?, ?it/s]
100%|██████████| 531/531 [00:00<00:00, 9278.24it/s]
+Total results for interface_protein_ligand: 531
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/logs/inference/verifier.log b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/logs/inference/verifier.log
new file mode 100644
index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/report.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/report.json
new file mode 100644
index 0000000000000000000000000000000000000000..54aa7fdf9d13497fd01817294b765ceecdab9dbf
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/report.json
@@ -0,0 +1,69 @@
+{
+  "accepted_predictions": 1424,
+  "benchmark_visible_during_development": true,
+  "evaluation_mode": "model_replay",
+  "expected_predictions": 1448,
+  "invalid_predictions": [],
+  "label_isolated_sandbox": false,
+  "missing_or_invalid_predictions": 24,
+  "requests": 1448,
+  "reward": 0.008130081300813007,
+  "reward_definition": "unweighted mean of the per-track scores in reward.json",
+  "suite_manifest_sha256": "15ca32c737d8548f62cc7e6a237151ae6c15a079b6910e674c279f6d15bb6104",
+  "tracks": {
+    "interface_antibody_antigen": {
+      "finite_targets": 148,
+      "missing_or_invalid": 7,
+      "score": 0.0,
+      "targets": 155
+    },
+    "interface_protein_dna": {
+      "finite_targets": 300,
+      "missing_or_invalid": 11,
+      "score": 0.0,
+      "targets": 311
+    },
+    "interface_protein_ligand": {
+      "finite_targets": 478,
+      "missing_or_invalid": 70,
+      "score": 0.0,
+      "targets": 548
+    },
+    "interface_protein_peptide": {
+      "finite_targets": 35,
+      "missing_or_invalid": 6,
+      "score": 0.07317073170731707,
+      "targets": 41
+    },
+    "interface_protein_protein": {
+      "finite_targets": 233,
+      "missing_or_invalid": 28,
+      "score": 0.0,
+      "targets": 261
+    },
+    "interface_protein_rna": {
+      "finite_targets": 51,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 51
+    },
+    "monomer_dna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 12
+    },
+    "monomer_protein": {
+      "finite_targets": 322,
+      "missing_or_invalid": 2,
+      "score": 0.0,
+      "targets": 324
+    },
+    "monomer_rna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 12
+    }
+  }
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/reward.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/reward.json
new file mode 100644
index 0000000000000000000000000000000000000000..66212cdba7b25f0875a471e813b52512e44bc7c6
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/reward.json
@@ -0,0 +1,12 @@
+{
+  "interface_antibody_antigen": 0.0,
+  "interface_protein_dna": 0.0,
+  "interface_protein_ligand": 0.0,
+  "interface_protein_peptide": 0.07317073170731707,
+  "interface_protein_protein": 0.0,
+  "interface_protein_rna": 0.0,
+  "monomer_dna": 0.0,
+  "monomer_protein": 0.0,
+  "monomer_rna": 0.0,
+  "reward": 0.008130081300813007
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S003/report.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S003/report.json
new file mode 100644
index 0000000000000000000000000000000000000000..54aa7fdf9d13497fd01817294b765ceecdab9dbf
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S003/report.json
@@ -0,0 +1,69 @@
+{
+  "accepted_predictions": 1424,
+  "benchmark_visible_during_development": true,
+  "evaluation_mode": "model_replay",
+  "expected_predictions": 1448,
+  "invalid_predictions": [],
+  "label_isolated_sandbox": false,
+  "missing_or_invalid_predictions": 24,
+  "requests": 1448,
+  "reward": 0.008130081300813007,
+  "reward_definition": "unweighted mean of the per-track scores in reward.json",
+  "suite_manifest_sha256": "15ca32c737d8548f62cc7e6a237151ae6c15a079b6910e674c279f6d15bb6104",
+  "tracks": {
+    "interface_antibody_antigen": {
+      "finite_targets": 148,
+      "missing_or_invalid": 7,
+      "score": 0.0,
+      "targets": 155
+    },
+    "interface_protein_dna": {
+      "finite_targets": 300,
+      "missing_or_invalid": 11,
+      "score": 0.0,
+      "targets": 311
+    },
+    "interface_protein_ligand": {
+      "finite_targets": 478,
+      "missing_or_invalid": 70,
+      "score": 0.0,
+      "targets": 548
+    },
+    "interface_protein_peptide": {
+      "finite_targets": 35,
+      "missing_or_invalid": 6,
+      "score": 0.07317073170731707,
+      "targets": 41
+    },
+    "interface_protein_protein": {
+      "finite_targets": 233,
+      "missing_or_invalid": 28,
+      "score": 0.0,
+      "targets": 261
+    },
+    "interface_protein_rna": {
+      "finite_targets": 51,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 51
+    },
+    "monomer_dna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 12
+    },
+    "monomer_protein": {
+      "finite_targets": 322,
+      "missing_or_invalid": 2,
+      "score": 0.0,
+      "targets": 324
+    },
+    "monomer_rna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 12
+    }
+  }
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/logs/inference/results/scoring.log b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/logs/inference/results/scoring.log
new file mode 100644
index 0000000000000000000000000000000000000000..776e017793baa5c461c80316ebec4109835e5f95
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/logs/inference/results/scoring.log
@@ -0,0 +1,1148 @@
+WARNING:root:Invoking DockQ as script rather than binary. This will slow down computations.
+
  0%|          | 0/322 [00:00<?, ?it/s]
  0%|          | 1/322 [00:01<08:32,  1.60s/it]
  1%|          | 2/322 [00:02<05:24,  1.01s/it]
  2%|▏         | 5/322 [00:02<01:40,  3.16it/s]
  2%|▏         | 8/322 [00:02<00:55,  5.68it/s]
  4%|▍         | 13/322 [00:02<00:28, 10.98it/s]
  5%|▌         | 17/322 [00:02<00:22, 13.44it/s]
  7%|▋         | 23/322 [00:02<00:14, 20.43it/s]
  8%|▊         | 27/322 [00:03<00:15, 19.63it/s]
 10%|▉         | 31/322 [00:03<00:29,  9.85it/s]
 11%|█         | 34/322 [00:04<00:26, 10.87it/s]
 11%|█▏        | 37/322 [00:04<00:22, 12.94it/s]
 12%|█▏        | 40/322 [00:04<00:21, 12.90it/s]
 13%|█▎        | 42/322 [00:04<00:25, 10.87it/s]
 14%|█▎        | 44/322 [00:04<00:26, 10.66it/s]
 14%|█▍        | 46/322 [00:05<00:26, 10.35it/s]
 15%|█▌        | 49/322 [00:05<00:22, 12.38it/s]
 16%|█▌        | 52/322 [00:05<00:20, 13.21it/s]
 17%|█▋        | 54/322 [00:05<00:21, 12.23it/s]
 18%|█▊        | 59/322 [00:05<00:14, 18.29it/s]
 19%|█▉        | 62/322 [00:06<00:17, 14.54it/s]
 20%|█▉        | 64/322 [00:06<00:19, 13.44it/s]
 20%|██        | 66/322 [00:06<00:20, 12.43it/s]
 21%|██        | 68/322 [00:06<00:18, 13.53it/s]
 22%|██▏       | 70/322 [00:06<00:22, 11.29it/s]
 22%|██▏       | 72/322 [00:07<00:19, 12.63it/s]
 23%|██▎       | 74/322 [00:07<00:34,  7.24it/s]
 24%|██▎       | 76/322 [00:07<00:31,  7.72it/s]
 25%|██▍       | 80/322 [00:07<00:20, 12.05it/s]
 26%|██▋       | 85/322 [00:08<00:13, 17.48it/s]
 27%|██▋       | 88/322 [00:08<00:13, 17.15it/s]
 29%|██▉       | 93/322 [00:08<00:09, 23.16it/s]
 30%|███       | 97/322 [00:09<00:20, 10.86it/s]
 31%|███       | 100/322 [00:09<00:20, 10.82it/s]
 32%|███▏      | 103/322 [00:09<00:18, 12.04it/s]
 33%|███▎      | 105/322 [00:09<00:17, 12.21it/s]
 33%|███▎      | 107/322 [00:09<00:16, 12.70it/s]
 35%|███▍      | 112/322 [00:10<00:12, 16.57it/s]
 35%|███▌      | 114/322 [00:10<00:13, 15.06it/s]
 36%|███▌      | 116/322 [00:10<00:13, 15.39it/s]
 37%|███▋      | 118/322 [00:10<00:18, 11.29it/s]
 37%|███▋      | 120/322 [00:10<00:16, 12.55it/s]
 38%|███▊      | 122/322 [00:11<00:18, 10.67it/s]
 39%|███▊      | 124/322 [00:11<00:16, 12.06it/s]
 39%|███▉      | 127/322 [00:11<00:13, 14.17it/s]
 40%|████      | 129/322 [00:11<00:19,  9.92it/s]
 41%|████      | 131/322 [00:11<00:18, 10.23it/s]
 41%|████▏     | 133/322 [00:12<00:17, 10.87it/s]
 43%|████▎     | 137/322 [00:12<00:12, 14.63it/s]
 45%|████▍     | 144/322 [00:12<00:08, 20.45it/s]
 46%|████▌     | 147/322 [00:12<00:15, 11.62it/s]
 47%|████▋     | 151/322 [00:13<00:12, 14.03it/s]
 48%|████▊     | 153/322 [00:13<00:13, 12.86it/s]
 48%|████▊     | 156/322 [00:13<00:11, 13.84it/s]
 49%|████▉     | 159/322 [00:14<00:17,  9.45it/s]
 50%|█████     | 162/322 [00:14<00:14, 11.24it/s]
 51%|█████     | 164/322 [00:14<00:14, 10.77it/s]
 53%|█████▎    | 170/322 [00:14<00:08, 17.80it/s]
 54%|█████▎    | 173/322 [00:14<00:09, 15.06it/s]
 55%|█████▍    | 176/322 [00:15<00:10, 14.06it/s]
 55%|█████▌    | 178/322 [00:15<00:10, 14.01it/s]
 56%|█████▌    | 180/322 [00:15<00:09, 14.26it/s]
 57%|█████▋    | 182/322 [00:15<00:12, 11.26it/s]
 57%|█████▋    | 184/322 [00:16<00:20,  6.72it/s]
 59%|█████▊    | 189/322 [00:16<00:11, 11.20it/s]
 60%|█████▉    | 193/322 [00:16<00:08, 14.94it/s]
 61%|██████    | 196/322 [00:16<00:09, 13.92it/s]
 62%|██████▏   | 199/322 [00:17<00:12,  9.87it/s]
 62%|██████▏   | 201/322 [00:17<00:13,  8.91it/s]
 63%|██████▎   | 204/322 [00:17<00:11, 10.63it/s]
 64%|██████▍   | 206/322 [00:17<00:11, 10.49it/s]
 66%|██████▌   | 211/322 [00:18<00:07, 14.58it/s]
 66%|██████▌   | 213/322 [00:18<00:07, 15.10it/s]
 67%|██████▋   | 215/322 [00:18<00:11,  8.96it/s]
 68%|██████▊   | 220/322 [00:18<00:07, 13.67it/s]
 69%|██████▉   | 223/322 [00:19<00:07, 12.60it/s]
 70%|██████▉   | 225/322 [00:19<00:09, 10.77it/s]
 70%|███████   | 227/322 [00:19<00:08, 11.43it/s]
 71%|███████   | 229/322 [00:19<00:09, 10.14it/s]
 72%|███████▏  | 231/322 [00:20<00:08, 10.93it/s]
 73%|███████▎  | 234/322 [00:20<00:07, 11.73it/s]
 74%|███████▎  | 237/322 [00:20<00:05, 14.76it/s]
 74%|███████▍  | 239/322 [00:20<00:05, 14.05it/s]
 76%|███████▌  | 245/322 [00:20<00:03, 20.87it/s]
 77%|███████▋  | 248/322 [00:20<00:03, 19.10it/s]
 78%|███████▊  | 251/322 [00:21<00:03, 18.60it/s]
 79%|███████▊  | 253/322 [00:21<00:06, 10.68it/s]
 79%|███████▉  | 255/322 [00:21<00:07,  9.07it/s]
 80%|████████  | 258/322 [00:22<00:06, 10.07it/s]
 81%|████████  | 260/322 [00:22<00:05, 10.53it/s]
 82%|████████▏ | 263/322 [00:22<00:05, 11.22it/s]
 83%|████████▎ | 267/322 [00:22<00:04, 13.24it/s]
 84%|████████▍ | 270/322 [00:22<00:03, 14.09it/s]
 85%|████████▌ | 274/322 [00:23<00:02, 17.20it/s]
 88%|████████▊ | 282/322 [00:23<00:01, 26.85it/s]
 89%|████████▉ | 286/322 [00:23<00:01, 26.59it/s]
 90%|████████▉ | 289/322 [00:23<00:01, 26.48it/s]
 91%|█████████ | 292/322 [00:23<00:01, 20.97it/s]
 92%|█████████▏| 296/322 [00:23<00:01, 23.47it/s]
 93%|█████████▎| 300/322 [00:24<00:01, 19.26it/s]
 94%|█████████▍| 303/322 [00:24<00:00, 19.53it/s]
 95%|█████████▌| 306/322 [00:24<00:01, 11.91it/s]
 96%|█████████▌| 308/322 [00:25<00:01, 10.63it/s]
 96%|█████████▋| 310/322 [00:25<00:01, 11.22it/s]
 97%|█████████▋| 312/322 [00:25<00:00, 12.25it/s]
 98%|█████████▊| 314/322 [00:25<00:00, 10.43it/s]
 98%|█████████▊| 316/322 [00:26<00:00,  7.41it/s]
 99%|█████████▉| 318/322 [00:26<00:00,  6.55it/s]
 99%|█████████▉| 319/322 [00:26<00:00,  6.40it/s]
 99%|█████████▉| 320/322 [00:27<00:00,  3.67it/s]
100%|█████████▉| 321/322 [00:29<00:00,  1.53it/s]
100%|██████████| 322/322 [00:54<00:00,  6.35s/it]
100%|██████████| 322/322 [00:54<00:00,  5.91it/s]
+
  0%|          | 0/322 [00:00<?, ?it/s]
100%|██████████| 322/322 [00:00<00:00, 11367.83it/s]
+Total results for monomer_protein: 322
+
  0%|          | 0/12 [00:00<?, ?it/s]
  8%|▊         | 1/12 [00:00<00:08,  1.36it/s]
 25%|██▌       | 3/12 [00:00<00:02,  3.86it/s]
 83%|████████▎ | 10/12 [00:01<00:00, 11.06it/s]
100%|██████████| 12/12 [00:03<00:00,  3.03it/s]
100%|██████████| 12/12 [00:03<00:00,  3.55it/s]
+
  0%|          | 0/12 [00:00<?, ?it/s]
100%|██████████| 12/12 [00:00<00:00, 1407.45it/s]
+Total results for monomer_rna: 12
+
  0%|          | 0/12 [00:00<?, ?it/s]
  8%|▊         | 1/12 [00:00<00:08,  1.30it/s]
 50%|█████     | 6/12 [00:00<00:00,  8.20it/s]
100%|██████████| 12/12 [00:01<00:00, 13.22it/s]
100%|██████████| 12/12 [00:01<00:00, 10.05it/s]
+
  0%|          | 0/12 [00:00<?, ?it/s]
100%|██████████| 12/12 [00:00<00:00, 5294.72it/s]
+Total results for monomer_dna: 12
+
  0%|          | 0/251 [00:00<?, ?it/s]
  0%|          | 1/251 [00:01<08:18,  1.99s/it]
  3%|▎         | 7/251 [00:02<00:56,  4.33it/s]
  4%|▍         | 10/251 [00:02<00:56,  4.30it/s]
  5%|▍         | 12/251 [00:03<00:53,  4.49it/s]
  6%|▌         | 14/251 [00:03<00:42,  5.62it/s]
  6%|▋         | 16/251 [00:03<00:42,  5.55it/s]
  7%|▋         | 18/251 [00:03<00:36,  6.46it/s]
  8%|▊         | 20/251 [00:04<00:35,  6.53it/s]
  8%|▊         | 21/251 [00:04<00:44,  5.17it/s]
  9%|▉         | 22/251 [00:04<00:44,  5.12it/s]
 10%|▉         | 24/251 [00:04<00:32,  6.90it/s]
 10%|▉         | 25/251 [00:05<00:55,  4.09it/s]
 11%|█         | 28/251 [00:05<00:33,  6.68it/s]
 13%|█▎        | 32/251 [00:05<00:23,  9.45it/s]
 14%|█▎        | 34/251 [00:06<00:22,  9.45it/s]
 15%|█▍        | 37/251 [00:06<00:19, 10.82it/s]
 16%|█▌        | 40/251 [00:06<00:17, 12.12it/s]
 17%|█▋        | 42/251 [00:06<00:21,  9.68it/s]
 18%|█▊        | 45/251 [00:07<00:22,  8.97it/s]
 19%|█▉        | 48/251 [00:07<00:24,  8.31it/s]
 20%|█▉        | 49/251 [00:07<00:23,  8.48it/s]
 20%|█▉        | 50/251 [00:07<00:23,  8.69it/s]
 21%|██        | 52/251 [00:07<00:19, 10.06it/s]
 22%|██▏       | 54/251 [00:08<00:22,  8.57it/s]
 22%|██▏       | 56/251 [00:08<00:19,  9.93it/s]
 23%|██▎       | 58/251 [00:08<00:23,  8.39it/s]
 24%|██▎       | 59/251 [00:08<00:24,  7.88it/s]
 25%|██▍       | 62/251 [00:09<00:19,  9.57it/s]
 25%|██▌       | 64/251 [00:09<00:17, 10.98it/s]
 26%|██▋       | 66/251 [00:09<00:22,  8.23it/s]
 27%|██▋       | 68/251 [00:10<00:28,  6.43it/s]
 29%|██▊       | 72/251 [00:10<00:18,  9.68it/s]
 29%|██▉       | 74/251 [00:10<00:17, 10.09it/s]
 30%|███       | 76/251 [00:10<00:15, 11.39it/s]
 31%|███       | 78/251 [00:11<00:28,  6.13it/s]
 32%|███▏      | 80/251 [00:11<00:30,  5.66it/s]
 32%|███▏      | 81/251 [00:11<00:28,  5.96it/s]
 33%|███▎      | 84/251 [00:12<00:20,  8.15it/s]
 35%|███▍      | 87/251 [00:12<00:17,  9.50it/s]
 35%|███▌      | 89/251 [00:12<00:18,  8.53it/s]
 37%|███▋      | 93/251 [00:13<00:20,  7.90it/s]
 38%|███▊      | 96/251 [00:13<00:15,  9.82it/s]
 39%|███▉      | 98/251 [00:13<00:19,  8.03it/s]
 40%|███▉      | 100/251 [00:13<00:17,  8.50it/s]
 41%|████      | 102/251 [00:14<00:17,  8.62it/s]
 42%|████▏     | 105/251 [00:14<00:12, 11.31it/s]
 43%|████▎     | 108/251 [00:14<00:11, 12.13it/s]
 44%|████▍     | 110/251 [00:14<00:13, 10.43it/s]
 45%|████▍     | 112/251 [00:14<00:13, 10.25it/s]
 45%|████▌     | 114/251 [00:15<00:15,  8.68it/s]
 46%|████▌     | 115/251 [00:15<00:18,  7.43it/s]
 46%|████▌     | 116/251 [00:15<00:17,  7.75it/s]
 47%|████▋     | 118/251 [00:15<00:14,  9.37it/s]
 49%|████▊     | 122/251 [00:15<00:08, 14.39it/s]
 49%|████▉     | 124/251 [00:15<00:09, 13.22it/s]
 51%|█████     | 127/251 [00:16<00:08, 13.95it/s]
 52%|█████▏    | 130/251 [00:16<00:12,  9.91it/s]
 53%|█████▎    | 132/251 [00:17<00:14,  8.07it/s]
 53%|█████▎    | 134/251 [00:17<00:14,  8.14it/s]
 54%|█████▍    | 136/251 [00:17<00:12,  9.48it/s]
 55%|█████▍    | 138/251 [00:17<00:15,  7.51it/s]
 56%|█████▌    | 140/251 [00:18<00:17,  6.19it/s]
 58%|█████▊    | 145/251 [00:18<00:11,  9.50it/s]
 59%|█████▊    | 147/251 [00:18<00:11,  9.04it/s]
 59%|█████▉    | 149/251 [00:19<00:14,  6.92it/s]
 61%|██████    | 152/251 [00:19<00:12,  8.24it/s]
 61%|██████▏   | 154/251 [00:19<00:11,  8.79it/s]
 63%|██████▎   | 157/251 [00:19<00:08, 10.86it/s]
 63%|██████▎   | 159/251 [00:20<00:13,  6.90it/s]
 64%|██████▍   | 161/251 [00:20<00:11,  7.98it/s]
 65%|██████▍   | 163/251 [00:20<00:10,  8.52it/s]
 66%|██████▌   | 165/251 [00:20<00:09,  9.30it/s]
 67%|██████▋   | 167/251 [00:21<00:11,  7.54it/s]
 68%|██████▊   | 170/251 [00:21<00:08,  9.61it/s]
 69%|██████▊   | 172/251 [00:21<00:10,  7.87it/s]
 69%|██████▉   | 173/251 [00:22<00:09,  7.90it/s]
 70%|███████   | 176/251 [00:22<00:07,  9.48it/s]
 71%|███████   | 178/251 [00:22<00:07,  9.34it/s]
 72%|███████▏  | 181/251 [00:22<00:05, 12.29it/s]
 73%|███████▎  | 183/251 [00:22<00:06, 11.05it/s]
 74%|███████▎  | 185/251 [00:22<00:05, 12.26it/s]
 75%|███████▍  | 188/251 [00:23<00:04, 15.58it/s]
 76%|███████▌  | 190/251 [00:23<00:06,  8.97it/s]
 76%|███████▋  | 192/251 [00:23<00:05,  9.84it/s]
 77%|███████▋  | 194/251 [00:23<00:05, 10.07it/s]
 78%|███████▊  | 197/251 [00:24<00:04, 11.65it/s]
 80%|████████  | 201/251 [00:24<00:03, 14.24it/s]
 81%|████████▏ | 204/251 [00:24<00:03, 15.36it/s]
 84%|████████▎ | 210/251 [00:24<00:01, 23.09it/s]
 85%|████████▍ | 213/251 [00:24<00:01, 21.37it/s]
 86%|████████▌ | 216/251 [00:24<00:01, 20.60it/s]
 87%|████████▋ | 219/251 [00:25<00:01, 19.67it/s]
 88%|████████▊ | 222/251 [00:25<00:01, 17.39it/s]
 89%|████████▉ | 224/251 [00:25<00:01, 14.36it/s]
 90%|█████████ | 226/251 [00:25<00:02,  9.81it/s]
 91%|█████████ | 228/251 [00:26<00:02, 10.32it/s]
 92%|█████████▏| 230/251 [00:26<00:02,  9.52it/s]
 92%|█████████▏| 232/251 [00:27<00:03,  5.24it/s]
 93%|█████████▎| 233/251 [00:27<00:03,  5.44it/s]
 94%|█████████▎| 235/251 [00:27<00:03,  4.85it/s]
 94%|█████████▍| 237/251 [00:28<00:02,  5.54it/s]
 95%|█████████▍| 238/251 [00:28<00:02,  4.76it/s]
 95%|█████████▌| 239/251 [00:28<00:02,  4.85it/s]
 96%|█████████▌| 241/251 [00:30<00:04,  2.31it/s]
 96%|█████████▋| 242/251 [00:31<00:05,  1.79it/s]
 97%|█████████▋| 243/251 [00:32<00:05,  1.49it/s]
 97%|█████████▋| 244/251 [00:32<00:04,  1.74it/s]
 98%|█████████▊| 245/251 [00:33<00:03,  1.75it/s]
 98%|█████████▊| 246/251 [00:33<00:02,  2.09it/s]
 98%|█████████▊| 247/251 [00:34<00:02,  1.46it/s]
 99%|█████████▉| 248/251 [00:34<00:01,  1.82it/s]
 99%|█████████▉| 249/251 [00:35<00:01,  1.65it/s]
100%|█████████▉| 250/251 [00:35<00:00,  2.06it/s]
100%|██████████| 251/251 [00:47<00:00,  3.85s/it]
100%|██████████| 251/251 [00:47<00:00,  5.27it/s]
+
  0%|          | 0/251 [00:00<?, ?it/s]
100%|██████████| 251/251 [00:00<00:00, 4771.98it/s]
+Total results for interface_protein_protein: 251
+
  0%|          | 0/154 [00:00<?, ?it/s]
  1%|          | 1/154 [00:03<07:50,  3.07s/it]
  2%|▏         | 3/154 [00:03<02:37,  1.04s/it]
  3%|▎         | 4/154 [00:04<02:04,  1.21it/s]
  3%|▎         | 5/154 [00:04<01:35,  1.56it/s]
  4%|▍         | 6/154 [00:04<01:15,  1.95it/s]
  5%|▍         | 7/154 [00:04<01:01,  2.41it/s]
  5%|▌         | 8/154 [00:05<00:49,  2.97it/s]
  6%|▋         | 10/154 [00:05<00:41,  3.47it/s]
  9%|▉         | 14/154 [00:05<00:21,  6.42it/s]
 10%|█         | 16/154 [00:05<00:19,  7.07it/s]
 12%|█▏        | 19/154 [00:06<00:13,  9.95it/s]
 14%|█▎        | 21/154 [00:06<00:12, 10.87it/s]
 16%|█▌        | 24/154 [00:06<00:16,  8.10it/s]
 17%|█▋        | 26/154 [00:06<00:16,  7.90it/s]
 18%|█▊        | 28/154 [00:07<00:13,  9.36it/s]
 19%|█▉        | 30/154 [00:07<00:12, 10.17it/s]
 21%|██        | 32/154 [00:07<00:12, 10.07it/s]
 22%|██▏       | 34/154 [00:08<00:18,  6.50it/s]
 24%|██▍       | 37/154 [00:08<00:12,  9.13it/s]
 25%|██▌       | 39/154 [00:08<00:11, 10.04it/s]
 27%|██▋       | 42/154 [00:08<00:09, 11.73it/s]
 29%|██▊       | 44/154 [00:08<00:10, 10.85it/s]
 32%|███▏      | 49/154 [00:08<00:06, 17.29it/s]
 34%|███▍      | 52/154 [00:09<00:16,  6.34it/s]
 35%|███▌      | 54/154 [00:10<00:15,  6.65it/s]
 36%|███▋      | 56/154 [00:10<00:15,  6.13it/s]
 38%|███▊      | 58/154 [00:11<00:16,  5.94it/s]
 38%|███▊      | 59/154 [00:11<00:18,  5.05it/s]
 40%|████      | 62/154 [00:11<00:12,  7.46it/s]
 42%|████▏     | 64/154 [00:11<00:10,  8.99it/s]
 43%|████▎     | 66/154 [00:11<00:10,  8.02it/s]
 44%|████▍     | 68/154 [00:12<00:09,  8.90it/s]
 45%|████▌     | 70/154 [00:12<00:15,  5.40it/s]
 47%|████▋     | 73/154 [00:13<00:12,  6.48it/s]
 48%|████▊     | 74/154 [00:13<00:15,  5.30it/s]
 49%|████▊     | 75/154 [00:13<00:17,  4.61it/s]
 50%|█████     | 77/154 [00:14<00:13,  5.72it/s]
 52%|█████▏    | 80/154 [00:14<00:10,  7.36it/s]
 55%|█████▍    | 84/154 [00:14<00:06, 10.97it/s]
 56%|█████▌    | 86/154 [00:14<00:05, 11.70it/s]
 57%|█████▋    | 88/154 [00:15<00:09,  6.85it/s]
 58%|█████▊    | 90/154 [00:15<00:09,  6.49it/s]
 60%|█████▉    | 92/154 [00:15<00:07,  7.86it/s]
 61%|██████    | 94/154 [00:16<00:10,  5.81it/s]
 62%|██████▏   | 95/154 [00:16<00:09,  6.02it/s]
 63%|██████▎   | 97/154 [00:16<00:07,  7.53it/s]
 64%|██████▍   | 99/154 [00:16<00:05,  9.26it/s]
 66%|██████▌   | 101/154 [00:16<00:05,  8.96it/s]
 67%|██████▋   | 103/154 [00:17<00:06,  7.60it/s]
 68%|██████▊   | 104/154 [00:17<00:06,  7.63it/s]
 70%|███████   | 108/154 [00:17<00:04,  9.92it/s]
 71%|███████▏  | 110/154 [00:17<00:04, 10.19it/s]
 73%|███████▎  | 112/154 [00:18<00:04,  8.70it/s]
 73%|███████▎  | 113/154 [00:18<00:04,  8.88it/s]
 74%|███████▍  | 114/154 [00:18<00:04,  8.11it/s]
 75%|███████▍  | 115/154 [00:18<00:04,  7.86it/s]
 75%|███████▌  | 116/154 [00:18<00:04,  7.71it/s]
 78%|███████▊  | 120/154 [00:18<00:02, 13.62it/s]
 79%|███████▉  | 122/154 [00:18<00:02, 12.26it/s]
 82%|████████▏ | 126/154 [00:19<00:01, 16.28it/s]
 84%|████████▍ | 129/154 [00:19<00:01, 18.72it/s]
 86%|████████▌ | 132/154 [00:19<00:02, 10.05it/s]
 88%|████████▊ | 135/154 [00:19<00:01, 12.69it/s]
 90%|████████▉ | 138/154 [00:20<00:02,  7.75it/s]
 92%|█████████▏| 142/154 [00:20<00:01,  9.92it/s]
 94%|█████████▎| 144/154 [00:21<00:01,  6.85it/s]
 95%|█████████▍| 146/154 [00:22<00:01,  5.04it/s]
 95%|█████████▌| 147/154 [00:22<00:01,  4.37it/s]
 96%|█████████▌| 148/154 [00:22<00:01,  4.70it/s]
 97%|█████████▋| 149/154 [00:22<00:01,  4.98it/s]
 97%|█████████▋| 150/154 [00:23<00:00,  4.09it/s]
 98%|█████████▊| 151/154 [00:26<00:02,  1.17it/s]
 99%|█████████▊| 152/154 [00:26<00:01,  1.40it/s]
 99%|█████████▉| 153/154 [00:27<00:00,  1.39it/s]
100%|██████████| 154/154 [00:27<00:00,  1.76it/s]
100%|██████████| 154/154 [00:27<00:00,  5.62it/s]
+
  0%|          | 0/154 [00:00<?, ?it/s]
 97%|█████████▋| 149/154 [00:00<00:00, 1475.34it/s]
100%|██████████| 154/154 [00:00<00:00, 1485.08it/s]
+Total results for interface_antibody_antigen: 154
+
  0%|          | 0/41 [00:00<?, ?it/s]
 10%|▉         | 4/41 [00:01<00:14,  2.60it/s]
 12%|█▏        | 5/41 [00:02<00:14,  2.46it/s]
 15%|█▍        | 6/41 [00:02<00:11,  3.00it/s]
 17%|█▋        | 7/41 [00:02<00:10,  3.38it/s]
 22%|██▏       | 9/41 [00:02<00:07,  4.35it/s]
 24%|██▍       | 10/41 [00:02<00:06,  4.80it/s]
 27%|██▋       | 11/41 [00:03<00:10,  2.89it/s]
 29%|██▉       | 12/41 [00:03<00:08,  3.32it/s]
 34%|███▍      | 14/41 [00:03<00:05,  5.12it/s]
 37%|███▋      | 15/41 [00:04<00:05,  4.99it/s]
 39%|███▉      | 16/41 [00:04<00:04,  5.47it/s]
 46%|████▋     | 19/41 [00:04<00:03,  6.05it/s]
 51%|█████     | 21/41 [00:04<00:02,  7.29it/s]
 54%|█████▎    | 22/41 [00:05<00:04,  4.54it/s]
 56%|█████▌    | 23/41 [00:05<00:04,  3.65it/s]
 59%|█████▊    | 24/41 [00:06<00:05,  3.22it/s]
 61%|██████    | 25/41 [00:06<00:04,  3.23it/s]
 63%|██████▎   | 26/41 [00:07<00:05,  2.80it/s]
 71%|███████   | 29/41 [00:07<00:02,  4.32it/s]
 73%|███████▎  | 30/41 [00:07<00:02,  3.93it/s]
 76%|███████▌  | 31/41 [00:07<00:02,  4.26it/s]
 78%|███████▊  | 32/41 [00:08<00:02,  4.49it/s]
 80%|████████  | 33/41 [00:08<00:01,  5.05it/s]
 88%|████████▊ | 36/41 [00:08<00:00,  6.19it/s]
 93%|█████████▎| 38/41 [00:08<00:00,  6.31it/s]
 95%|█████████▌| 39/41 [00:14<00:02,  1.20s/it]
 98%|█████████▊| 40/41 [00:14<00:00,  1.01it/s]
100%|██████████| 41/41 [00:15<00:00,  1.01it/s]
100%|██████████| 41/41 [00:15<00:00,  2.61it/s]
+
  0%|          | 0/41 [00:00<?, ?it/s]
100%|██████████| 41/41 [00:00<00:00, 525.39it/s]
+Total results for interface_protein_peptide: 41
+
  0%|          | 0/51 [00:00<?, ?it/s]
  6%|▌         | 3/51 [00:01<00:25,  1.91it/s]
  8%|▊         | 4/51 [00:01<00:18,  2.56it/s]
 14%|█▎        | 7/51 [00:01<00:08,  5.00it/s]
 18%|█▊        | 9/51 [00:02<00:06,  6.57it/s]
 22%|██▏       | 11/51 [00:02<00:05,  6.85it/s]
 29%|██▉       | 15/51 [00:02<00:05,  6.81it/s]
 31%|███▏      | 16/51 [00:03<00:06,  5.63it/s]
 35%|███▌      | 18/51 [00:03<00:06,  5.27it/s]
 39%|███▉      | 20/51 [00:03<00:04,  6.74it/s]
 43%|████▎     | 22/51 [00:04<00:04,  6.61it/s]
 45%|████▌     | 23/51 [00:04<00:05,  4.71it/s]
 47%|████▋     | 24/51 [00:05<00:07,  3.71it/s]
 51%|█████     | 26/51 [00:05<00:04,  5.13it/s]
 53%|█████▎    | 27/51 [00:05<00:04,  5.43it/s]
 57%|█████▋    | 29/51 [00:05<00:03,  6.61it/s]
 61%|██████    | 31/51 [00:05<00:02,  7.17it/s]
 65%|██████▍   | 33/51 [00:05<00:02,  8.15it/s]
 67%|██████▋   | 34/51 [00:06<00:02,  7.68it/s]
 69%|██████▊   | 35/51 [00:06<00:02,  6.36it/s]
 73%|███████▎  | 37/51 [00:07<00:04,  2.91it/s]
 75%|███████▍  | 38/51 [00:08<00:05,  2.46it/s]
 76%|███████▋  | 39/51 [00:09<00:06,  1.98it/s]
 78%|███████▊  | 40/51 [00:09<00:04,  2.38it/s]
 80%|████████  | 41/51 [00:09<00:03,  2.89it/s]
 82%|████████▏ | 42/51 [00:10<00:04,  1.88it/s]
 84%|████████▍ | 43/51 [00:10<00:03,  2.35it/s]
 86%|████████▋ | 44/51 [00:11<00:03,  2.31it/s]
 88%|████████▊ | 45/51 [00:11<00:02,  2.06it/s]
 90%|█████████ | 46/51 [00:13<00:03,  1.34it/s]
 92%|█████████▏| 47/51 [00:13<00:02,  1.72it/s]
 94%|█████████▍| 48/51 [00:14<00:02,  1.41it/s]
 96%|█████████▌| 49/51 [00:18<00:03,  1.88s/it]
 98%|█████████▊| 50/51 [00:19<00:01,  1.46s/it]
100%|██████████| 51/51 [00:19<00:00,  1.11s/it]
100%|██████████| 51/51 [00:19<00:00,  2.60it/s]
+
  0%|          | 0/51 [00:00<?, ?it/s]
100%|██████████| 51/51 [00:00<00:00, 577.71it/s]
+Total results for interface_protein_rna: 51
+
  0%|          | 0/51 [00:00<?, ?it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+
  2%|▏         | 1/51 [00:00<00:08,  6.22it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches
+if they should be treated as homologous.
+
 10%|▉         | 5/51 [00:00<00:02, 20.60it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+
 22%|██▏       | 11/51 [00:00<00:01, 32.67it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain B, native chain E1_3: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 29%|██▉       | 15/51 [00:00<00:01, 29.04it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+
 37%|███▋      | 19/51 [00:00<00:01, 31.02it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain C, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain C, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 7 mismatches
+if they should be treated as homologous.
+
 45%|████▌     | 23/51 [00:00<00:00, 29.89it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain D, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+
 53%|█████▎    | 27/51 [00:01<00:01, 22.89it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain F, native chain E2_1: 8 mismatches, Model chain F, native chain E2_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain F, native chain E2_1: 8 mismatches, Model chain F, native chain E2_2: 8 mismatches, Model chain D, native chain E3_1: 9 mismatches, Model chain D, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+
 59%|█████▉    | 30/51 [00:01<00:00, 21.79it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1: 8 mismatches, Model chain E, native chain E2: 6 mismatches, Model chain E, native chain E3: 5 mismatches, Model chain C, native chain E5: 1 mismatches, Model chain E, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain A, native chain E5: 1 mismatches, Model chain D, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain B, native chain E5: 1 mismatches, Model chain D, native chain E5: 1 mismatches
+if they should be treated as homologous.
+
 65%|██████▍   | 33/51 [00:01<00:00, 18.56it/s]
 71%|███████   | 36/51 [00:01<00:00, 17.48it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 9 mismatches, Model chain B, native chain E1_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1: 7 mismatches, Model chain F, native chain E2: 6 mismatches, Model chain F, native chain E3: 5 mismatches, Model chain F, native chain E4_1: 2 mismatches, Model chain F, native chain E4_2: 2 mismatches, Model chain F, native chain E4_3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1: 7 mismatches, Model chain F, native chain E2: 6 mismatches, Model chain F, native chain E3: 5 mismatches, Model chain F, native chain E4_1: 2 mismatches, Model chain F, native chain E4_2: 2 mismatches, Model chain F, native chain E4_3: 2 mismatches, Model chain C, native chain E5: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E3: 9 mismatches, Model chain B, native chain E3: 5 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain B, native chain E4: 3 mismatches
+if they should be treated as homologous.
+
 75%|███████▍  | 38/51 [00:02<00:01, 12.25it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E5: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E4: 7 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+
 80%|████████  | 41/51 [00:02<00:00, 14.50it/s]
 86%|████████▋ | 44/51 [00:02<00:00, 13.93it/s]
 90%|█████████ | 46/51 [00:02<00:00, 13.79it/s]
 94%|█████████▍| 48/51 [00:02<00:00, 11.46it/s]
 98%|█████████▊| 50/51 [00:03<00:00,  7.73it/s]
100%|██████████| 51/51 [00:04<00:00, 11.37it/s]
+Total results for interface_protein_rna: 51
+
  0%|          | 0/311 [00:00<?, ?it/s]
  2%|▏         | 6/311 [00:01<01:19,  3.82it/s]
  3%|▎         | 8/311 [00:01<01:08,  4.45it/s]
  4%|▍         | 13/311 [00:02<00:43,  6.87it/s]
  6%|▌         | 18/311 [00:02<00:27, 10.70it/s]
  7%|▋         | 21/311 [00:02<00:24, 11.61it/s]
  8%|▊         | 25/311 [00:02<00:18, 15.15it/s]
  9%|▉         | 28/311 [00:02<00:16, 17.41it/s]
 11%|█         | 33/311 [00:03<00:17, 15.74it/s]
 12%|█▏        | 36/311 [00:04<00:33,  8.23it/s]
 12%|█▏        | 38/311 [00:04<00:34,  7.88it/s]
 13%|█▎        | 41/311 [00:04<00:27,  9.78it/s]
 14%|█▍        | 43/311 [00:04<00:25, 10.64it/s]
 14%|█▍        | 45/311 [00:04<00:23, 11.50it/s]
 15%|█▌        | 47/311 [00:05<00:33,  7.99it/s]
 16%|█▌        | 49/311 [00:05<00:29,  8.96it/s]
 16%|█▋        | 51/311 [00:05<00:38,  6.71it/s]
 17%|█▋        | 53/311 [00:06<00:33,  7.62it/s]
 18%|█▊        | 55/311 [00:06<00:31,  8.08it/s]
 18%|█▊        | 57/311 [00:06<00:30,  8.41it/s]
 19%|█▊        | 58/311 [00:06<00:37,  6.80it/s]
 20%|█▉        | 61/311 [00:06<00:26,  9.35it/s]
 20%|██        | 63/311 [00:07<00:26,  9.36it/s]
 21%|██        | 65/311 [00:07<00:27,  8.91it/s]
 22%|██▏       | 67/311 [00:07<00:23, 10.44it/s]
 22%|██▏       | 69/311 [00:07<00:24,  9.83it/s]
 23%|██▎       | 71/311 [00:07<00:23, 10.38it/s]
 23%|██▎       | 73/311 [00:08<00:23, 10.33it/s]
 24%|██▍       | 75/311 [00:08<00:24,  9.61it/s]
 25%|██▍       | 77/311 [00:08<00:32,  7.23it/s]
 25%|██▌       | 78/311 [00:08<00:32,  7.18it/s]
 26%|██▌       | 80/311 [00:09<00:35,  6.55it/s]
 26%|██▌       | 81/311 [00:09<00:33,  6.80it/s]
 27%|██▋       | 83/311 [00:09<00:27,  8.18it/s]
 27%|██▋       | 84/311 [00:09<00:26,  8.42it/s]
 28%|██▊       | 87/311 [00:09<00:19, 11.34it/s]
 29%|██▊       | 89/311 [00:10<00:47,  4.65it/s]
 30%|██▉       | 93/311 [00:10<00:29,  7.47it/s]
 31%|███       | 95/311 [00:11<00:36,  5.93it/s]
 31%|███       | 97/311 [00:11<00:32,  6.58it/s]
 32%|███▏      | 99/311 [00:11<00:27,  7.61it/s]
 32%|███▏      | 101/311 [00:12<00:32,  6.48it/s]
 33%|███▎      | 103/311 [00:12<00:26,  7.94it/s]
 34%|███▍      | 105/311 [00:12<00:28,  7.16it/s]
 34%|███▍      | 107/311 [00:13<00:29,  6.84it/s]
 35%|███▍      | 108/311 [00:13<00:49,  4.11it/s]
 35%|███▌      | 110/311 [00:13<00:38,  5.18it/s]
 36%|███▌      | 112/311 [00:14<00:44,  4.45it/s]
 37%|███▋      | 114/311 [00:14<00:40,  4.86it/s]
 38%|███▊      | 117/311 [00:15<00:28,  6.84it/s]
 38%|███▊      | 118/311 [00:15<00:27,  7.12it/s]
 38%|███▊      | 119/311 [00:15<00:37,  5.18it/s]
 39%|███▊      | 120/311 [00:15<00:35,  5.44it/s]
 40%|███▉      | 124/311 [00:15<00:18, 10.14it/s]
 41%|████      | 128/311 [00:16<00:15, 11.68it/s]
 42%|████▏     | 130/311 [00:16<00:14, 12.37it/s]
 42%|████▏     | 132/311 [00:16<00:16, 10.81it/s]
 43%|████▎     | 134/311 [00:17<00:29,  6.00it/s]
 44%|████▍     | 137/311 [00:17<00:22,  7.88it/s]
 45%|████▌     | 140/311 [00:17<00:16, 10.32it/s]
 46%|████▌     | 142/311 [00:17<00:21,  7.75it/s]
 46%|████▋     | 144/311 [00:18<00:23,  7.01it/s]
 47%|████▋     | 146/311 [00:18<00:24,  6.70it/s]
 48%|████▊     | 148/311 [00:18<00:20,  7.85it/s]
 48%|████▊     | 150/311 [00:19<00:20,  7.78it/s]
 49%|████▉     | 153/311 [00:19<00:16,  9.31it/s]
 50%|█████     | 157/311 [00:19<00:16,  9.07it/s]
 51%|█████     | 159/311 [00:20<00:20,  7.47it/s]
 51%|█████▏    | 160/311 [00:20<00:21,  7.13it/s]
 52%|█████▏    | 162/311 [00:20<00:24,  6.15it/s]
 52%|█████▏    | 163/311 [00:21<00:27,  5.38it/s]
 53%|█████▎    | 164/311 [00:21<00:31,  4.65it/s]
 54%|█████▍    | 169/311 [00:21<00:16,  8.81it/s]
 57%|█████▋    | 176/311 [00:22<00:12, 10.71it/s]
 57%|█████▋    | 178/311 [00:22<00:11, 11.22it/s]
 58%|█████▊    | 180/311 [00:22<00:12, 10.35it/s]
 59%|█████▊    | 182/311 [00:23<00:20,  6.37it/s]
 59%|█████▉    | 183/311 [00:23<00:23,  5.43it/s]
 59%|█████▉    | 185/311 [00:23<00:23,  5.47it/s]
 61%|██████▏   | 191/311 [00:24<00:11, 10.41it/s]
 62%|██████▏   | 194/311 [00:24<00:09, 12.32it/s]
 63%|██████▎   | 196/311 [00:24<00:10, 10.47it/s]
 64%|██████▎   | 198/311 [00:24<00:10, 10.99it/s]
 64%|██████▍   | 200/311 [00:25<00:12,  8.74it/s]
 65%|██████▌   | 203/311 [00:25<00:11,  9.23it/s]
 66%|██████▌   | 205/311 [00:25<00:10, 10.14it/s]
 67%|██████▋   | 207/311 [00:25<00:09, 11.49it/s]
 67%|██████▋   | 209/311 [00:25<00:10,  9.65it/s]
 68%|██████▊   | 212/311 [00:26<00:07, 12.83it/s]
 69%|██████▉   | 215/311 [00:26<00:07, 12.57it/s]
 70%|██████▉   | 217/311 [00:26<00:09,  9.80it/s]
 70%|███████   | 219/311 [00:26<00:10,  8.66it/s]
 71%|███████   | 221/311 [00:27<00:10,  8.90it/s]
 72%|███████▏  | 224/311 [00:27<00:07, 11.21it/s]
 73%|███████▎  | 226/311 [00:27<00:07, 12.10it/s]
 73%|███████▎  | 228/311 [00:27<00:10,  8.02it/s]
 74%|███████▍  | 230/311 [00:28<00:10,  7.91it/s]
 75%|███████▍  | 232/311 [00:28<00:09,  8.26it/s]
 75%|███████▍  | 233/311 [00:28<00:09,  7.90it/s]
 76%|███████▌  | 235/311 [00:28<00:10,  7.09it/s]
 76%|███████▌  | 236/311 [00:29<00:14,  5.33it/s]
 77%|███████▋  | 240/311 [00:29<00:07,  9.38it/s]
 78%|███████▊  | 244/311 [00:29<00:04, 13.81it/s]
 79%|███████▉  | 247/311 [00:29<00:04, 13.67it/s]
 80%|████████  | 249/311 [00:29<00:05, 12.24it/s]
 81%|████████  | 251/311 [00:30<00:04, 13.52it/s]
 82%|████████▏ | 254/311 [00:30<00:04, 13.98it/s]
 83%|████████▎ | 257/311 [00:30<00:03, 16.51it/s]
 83%|████████▎ | 259/311 [00:30<00:04, 12.44it/s]
 85%|████████▍ | 263/311 [00:30<00:03, 14.94it/s]
 85%|████████▌ | 265/311 [00:30<00:02, 15.48it/s]
 86%|████████▌ | 267/311 [00:31<00:04,  9.46it/s]
 86%|████████▋ | 269/311 [00:31<00:06,  6.89it/s]
 88%|████████▊ | 273/311 [00:32<00:03, 10.59it/s]
 88%|████████▊ | 275/311 [00:32<00:03, 11.19it/s]
 89%|████████▉ | 278/311 [00:32<00:02, 14.01it/s]
 90%|█████████ | 281/311 [00:32<00:01, 16.51it/s]
 91%|█████████▏| 284/311 [00:32<00:01, 16.86it/s]
 92%|█████████▏| 287/311 [00:32<00:01, 14.06it/s]
 93%|█████████▎| 289/311 [00:32<00:01, 14.66it/s]
 94%|█████████▎| 291/311 [00:33<00:01, 13.39it/s]
 95%|█████████▍| 295/311 [00:33<00:00, 16.57it/s]
 95%|█████████▌| 297/311 [00:33<00:00, 16.61it/s]
 96%|█████████▋| 300/311 [00:33<00:00, 15.48it/s]
 97%|█████████▋| 302/311 [00:33<00:00, 15.93it/s]
 98%|█████████▊| 304/311 [00:34<00:01,  6.96it/s]
 98%|█████████▊| 306/311 [00:34<00:00,  6.51it/s]
 99%|█████████▉| 308/311 [00:35<00:00,  4.26it/s]
 99%|█████████▉| 309/311 [00:36<00:00,  4.08it/s]
100%|█████████▉| 310/311 [00:36<00:00,  3.48it/s]
100%|██████████| 311/311 [00:37<00:00,  2.57it/s]
100%|██████████| 311/311 [00:37<00:00,  8.34it/s]
+
  0%|          | 0/311 [00:00<?, ?it/s]
100%|██████████| 311/311 [00:00<00:00, 77423.35it/s]
+Total results for interface_protein_dna: 311
+
  0%|          | 0/311 [00:00<?, ?it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain B, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
  0%|          | 1/311 [00:00<01:14,  4.17it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain C, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain D, native chain E2: 9 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 5 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain C, native chain E1: 5 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 3 mismatches, Model chain B, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 8 mismatches, Model chain B, native chain E2: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8pw0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 201, in dockq
+    best_result, best_dockq = run_chain_map(best_mapping)
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 301, in calc_DockQ
+    aligned_sample_2, aligned_ref_2 = get_aligned_residues(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 124, in get_aligned_residues
+    rB = next(resB)
+StopIteration
+
+
  4%|▎         | 11/311 [00:00<00:10, 27.50it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 8 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 8 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 3 mismatches, Model chain C, native chain E4: 3 mismatches, Model chain C, native chain E5: 2 mismatches
+if they should be treated as homologous.
+
  6%|▋         | 20/311 [00:00<00:08, 36.17it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain B, native chain E2: 1 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 6 mismatches
+if they should be treated as homologous.
+
  9%|▉         | 28/311 [00:00<00:06, 44.27it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 9 mismatches, Model chain A, native chain E2_2: 9 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 9 mismatches, Model chain F, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 9 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3_1: 7 mismatches, Model chain B, native chain E3_2: 7 mismatches, Model chain B, native chain E3_3: 7 mismatches
+if they should be treated as homologous.
+
 11%|█         | 34/311 [00:00<00:06, 42.58it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2_1: 7 mismatches, Model chain C, native chain E2_2: 7 mismatches, Model chain C, native chain E2_3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E1_1: 6 mismatches, Model chain C-2, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain C-2, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain C-2, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain C, native chain E1_3: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain D, native chain E1_3: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D-2, native chain E1_1: 3 mismatches, Model chain D-2, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain D-2, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain D-2, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+
 13%|█▎        | 39/311 [00:01<00:07, 37.56it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 4 mismatches, Model chain C, native chain E2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3_1: 8 mismatches, Model chain B, native chain E3_2: 8 mismatches, Model chain B, native chain E3_3: 8 mismatches, Model chain B, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain B, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain D, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 15%|█▌        | 47/311 [00:01<00:05, 45.27it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches
+if they should be treated as homologous.
+
 17%|█▋        | 52/311 [00:01<00:06, 41.40it/s]ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 8 mismatches, Model chain D, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain D, native chain E2_2: 8 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8sv3-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 621, in run_on_all_native_interfaces
+    native_chains = tuple([native_structure[chain] for chain in chain_pair])
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 621, in <listcomp>
+    native_chains = tuple([native_structure[chain] for chain in chain_pair])
+  File "/opt/foldbench-env/lib/python3.9/site-packages/Bio/PDB/Entity.py", line 65, in __getitem__
+    return self.child_dict[id]
+KeyError: 'D'
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 4 mismatches, Model chain F, native chain E1_2: 4 mismatches, Model chain F, native chain E2_1: 6 mismatches, Model chain F, native chain E2_2: 6 mismatches, Model chain C, native chain E3: 6 mismatches, Model chain F, native chain E3: 4 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain C, native chain E3: 6 mismatches, Model chain C, native chain E4: 6 mismatches, Model chain E, native chain E4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches, Model chain A, native chain E3_3: 9 mismatches, Model chain A, native chain E3_4: 9 mismatches, Model chain A, native chain E3_5: 9 mismatches, Model chain A, native chain E3_6: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches, Model chain B, native chain E3_3: 9 mismatches, Model chain B, native chain E3_4: 9 mismatches, Model chain B, native chain E3_5: 9 mismatches, Model chain B, native chain E3_6: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain D, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 8 mismatches, Model chain I, native chain E1_2: 8 mismatches, Model chain I, native chain E1_3: 8 mismatches, Model chain I, native chain E1_4: 8 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain I, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain I, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain I, native chain E2_3: 5 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain I, native chain E2_4: 5 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain I, native chain E1_1: 8 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain I, native chain E1_2: 8 mismatches, Model chain B, native chain E1_3: 2 mismatches, Model chain I, native chain E1_3: 8 mismatches, Model chain B, native chain E1_4: 2 mismatches, Model chain I, native chain E1_4: 8 mismatches, Model chain I, native chain E2_1: 5 mismatches, Model chain I, native chain E2_2: 5 mismatches, Model chain I, native chain E2_3: 5 mismatches, Model chain I, native chain E2_4: 5 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain B, native chain E3_2: 5 mismatches, Model chain B, native chain E3_3: 5 mismatches, Model chain B, native chain E3_4: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain B, native chain E1_3: 6 mismatches, Model chain B, native chain E1_4: 6 mismatches, Model chain B, native chain E1_5: 6 mismatches, Model chain B, native chain E1_6: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E2_3: 6 mismatches, Model chain A, native chain E2_4: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain B, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain B, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain B, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches, Model chain B, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 8 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain C, native chain E1_3: 8 mismatches, Model chain C, native chain E1_4: 8 mismatches, Model chain C, native chain E1_5: 8 mismatches, Model chain C, native chain E1_6: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain C, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain C, native chain E2_2: 8 mismatches, Model chain A, native chain E2_3: 6 mismatches, Model chain C, native chain E2_3: 8 mismatches, Model chain A, native chain E2_4: 6 mismatches, Model chain C, native chain E2_4: 8 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+
 18%|█▊        | 57/311 [00:01<00:09, 27.69it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain C, native chain E1_3: 4 mismatches, Model chain C, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain C, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain C, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain C, native chain E2_3: 1 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain C, native chain E2_4: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain B, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain B, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 4 mismatches, Model chain B, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+
 22%|██▏       | 69/311 [00:01<00:05, 43.52it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain C, native chain E1: 6 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches
+if they should be treated as homologous.
+
 24%|██▍       | 76/311 [00:02<00:05, 41.12it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 6 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain A, native chain E2_3: 8 mismatches, Model chain I, native chain E2_3: 8 mismatches, Model chain A, native chain E2_4: 8 mismatches, Model chain I, native chain E2_4: 8 mismatches, Model chain A, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 6 mismatches, Model chain A, native chain E3_3: 6 mismatches, Model chain A, native chain E3_4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 8 mismatches, Model chain I, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 8 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain B, native chain E1_3: 8 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain B, native chain E1_4: 8 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain I, native chain E2_3: 8 mismatches, Model chain I, native chain E2_4: 8 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 9 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain A, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain C, native chain E1: 9 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3: 8 mismatches
+if they should be treated as homologous.
+
 26%|██▋       | 82/311 [00:02<00:05, 39.91it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain C, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8q43-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 305, in calc_DockQ
+    sample_res_distances = get_residue_distances(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 163, in get_residue_distances
+    model_res_distances = residue_distances(
+  File "/opt/foldbench/evaluation/DockQv2/operations_nocy.py", line 29, in residue_distances
+    atom_distances = get_distances_across_chains(atom_coordinates1, atom_coordinates2)
+  File "/opt/foldbench/evaluation/DockQv2/operations_nocy.py", line 6, in get_distances_across_chains
+    distances = ((model_A_atoms[:, None] - model_B_atoms[None, :]) ** 2).sum(-1)
+ValueError: operands could not be broadcast together with shapes (3390,1,3) (1,0) 
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 28%|██▊       | 87/311 [00:02<00:05, 37.79it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain C, native chain E2_1: 6 mismatches, Model chain C, native chain E2_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 1 mismatches
+if they should be treated as homologous.
+
 30%|██▉       | 93/311 [00:02<00:05, 41.88it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 5 mismatches, Model chain C, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyp-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+
 32%|███▏      | 98/311 [00:02<00:05, 36.09it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyp-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyn-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 5 mismatches, Model chain C, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyn-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain C, native chain E1_3: 3 mismatches, Model chain A-2, native chain E2: 3 mismatches, Model chain A-2, native chain E3: 8 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyo-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain D, native chain E1_3: 8 mismatches, Model chain A-2, native chain E2: 3 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A-2, native chain E3: 8 mismatches
+if they should be treated as homologous.
+
 34%|███▍      | 107/311 [00:02<00:04, 45.46it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E1_1: 5 mismatches, Model chain C-2, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+
 36%|███▋      | 113/311 [00:02<00:05, 39.60it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 2 mismatches, Model chain D, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain D, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain D, native chain E5: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain E, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain E, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain E, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain F, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain F, native chain E3: 3 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain F, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain C, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain C, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain C, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain D, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain D, native chain E2_2: 8 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 3 mismatches, Model chain A, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E1: 1 mismatches, Model chain C, native chain E1: 9 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 38%|███▊      | 118/311 [00:03<00:07, 26.98it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 39%|███▉      | 122/311 [00:03<00:06, 27.32it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain D, native chain E2_1: 9 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain D, native chain E2_2: 9 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain C, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain C, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
 41%|████      | 128/311 [00:03<00:05, 32.13it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain C, native chain E1_3: 1 mismatches, Model chain C, native chain E1_4: 1 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain C, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain C, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain C, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain C, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain B, native chain E1_3: 2 mismatches, Model chain B, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain B, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain B, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches, Model chain B, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+
 43%|████▎     | 133/311 [00:03<00:06, 26.26it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain A, native chain E2_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 3 mismatches
+if they should be treated as homologous.
+
 44%|████▍     | 137/311 [00:04<00:06, 26.02it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+
 45%|████▌     | 141/311 [00:04<00:06, 25.07it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+
 46%|████▋     | 144/311 [00:04<00:06, 24.60it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain B, native chain E3: 6 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+
 47%|████▋     | 147/311 [00:04<00:07, 22.48it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 9 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain C, native chain E2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 3 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
 49%|████▊     | 151/311 [00:04<00:06, 24.86it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 3 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain B, native chain E3: 6 mismatches, Model chain D, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain C, native chain E2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
 50%|████▉     | 155/311 [00:04<00:06, 25.88it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain F, native chain E3: 2 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain F, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 2 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain C, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches, Model chain C, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain D, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches, Model chain D, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 1 mismatches, Model chain E, native chain E1_2: 1 mismatches, Model chain E, native chain E2: 1 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain E, native chain E3: 1 mismatches, Model chain B, native chain E4: 1 mismatches, Model chain B, native chain E5: 2 mismatches, Model chain E, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 5 mismatches, Model chain D, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain D, native chain E1_3: 6 mismatches, Model chain D, native chain E1_4: 6 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain D, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain D, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 5 mismatches, Model chain D, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 51%|█████▏    | 160/311 [00:04<00:05, 25.96it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 9 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain C, native chain E1_4: 9 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain C, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain C, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+
 53%|█████▎    | 164/311 [00:05<00:05, 28.60it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 5 mismatches, Model chain E, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain E, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain E, native chain E1_2: 5 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain B, native chain E3_1: 6 mismatches, Model chain B, native chain E3_2: 6 mismatches
+if they should be treated as homologous.
+
 55%|█████▌    | 172/311 [00:05<00:03, 38.05it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 7 mismatches, Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain B, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches
+if they should be treated as homologous.
+
 57%|█████▋    | 177/311 [00:05<00:03, 36.28it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+
 60%|██████    | 187/311 [00:05<00:02, 50.17it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain B, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain D, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain D, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain C, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain C, native chain E3_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches
+if they should be treated as homologous.
+
 62%|██████▏   | 193/311 [00:05<00:03, 38.80it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain C, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain D, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 9 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain C, native chain E1_4: 9 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches, Model chain A, native chain E3_3: 9 mismatches, Model chain A, native chain E3_4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain C, native chain E1_1: 9 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain B, native chain E1_3: 3 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain B, native chain E1_4: 3 mismatches, Model chain C, native chain E1_4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain D, native chain E3: 1 mismatches
+if they should be treated as homologous.
+
 64%|██████▎   | 198/311 [00:05<00:03, 35.63it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E1_3: 4 mismatches, Model chain E, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain E, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain E, native chain E3_2: 6 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain E, native chain E3_3: 6 mismatches, Model chain A, native chain E3_4: 2 mismatches, Model chain E, native chain E3_4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 4 mismatches, Model chain C, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 7 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain D, native chain E3: 4 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain D, native chain E5: 4 mismatches
+if they should be treated as homologous.
+
 66%|██████▌   | 204/311 [00:05<00:02, 39.23it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain F, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain F, native chain E2_2: 6 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain F, native chain E2_3: 6 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain F, native chain E2_4: 6 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain A, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain F, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain F, native chain E2_2: 4 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain F, native chain E2_3: 4 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain F, native chain E2_4: 4 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain A, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E1_3: 4 mismatches, Model chain E, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain E, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain E, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain E, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 2 mismatches, Model chain E, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain D, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 67%|██████▋   | 209/311 [00:06<00:02, 35.39it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain D, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain E, native chain E3: 4 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain E, native chain E4: 4 mismatches, Model chain E, native chain E6: 1 mismatches
+if they should be treated as homologous.
+
 69%|██████▉   | 216/311 [00:06<00:02, 41.23it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 3 mismatches, Model chain E, native chain E1_2: 3 mismatches, Model chain E, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain C, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain C, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+
 71%|███████   | 221/311 [00:06<00:02, 37.00it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 73%|███████▎  | 226/311 [00:06<00:02, 38.05it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 8 mismatches, Model chain C, native chain E2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 4 mismatches, Model chain G, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain G, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain G, native chain E2_3: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 2 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 3 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain F, native chain E1_5: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain F, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain F, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain F, native chain E2_3: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain F, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain F, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain F, native chain E3_3: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8rpx-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 301, in calc_DockQ
+    aligned_sample_2, aligned_ref_2 = get_aligned_residues(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 124, in get_aligned_residues
+    rB = next(resB)
+StopIteration
+
+
 74%|███████▍  | 231/311 [00:06<00:02, 38.83it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 9 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 9 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+
 76%|███████▌  | 236/311 [00:06<00:02, 35.86it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain F, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain F, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 3 mismatches, Model chain A, native chain E3_3: 3 mismatches, Model chain A, native chain E3_4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 3 mismatches, Model chain E, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain E, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain E, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain F, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2_1: 3 mismatches, Model chain F, native chain E2_2: 3 mismatches, Model chain B, native chain E3_1: 2 mismatches, Model chain B, native chain E3_2: 2 mismatches, Model chain B, native chain E3_3: 2 mismatches, Model chain B, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain F, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2_1: 1 mismatches, Model chain F, native chain E2_2: 1 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain B, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+
 78%|███████▊  | 244/311 [00:06<00:01, 45.12it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+
 80%|████████  | 249/311 [00:07<00:01, 45.17it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E1: 1 mismatches, Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E4: 7 mismatches
+if they should be treated as homologous.
+
 82%|████████▏ | 254/311 [00:07<00:01, 46.32it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 1 mismatches, Model chain D, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain C, native chain E1: 8 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain B, native chain E1_3: 3 mismatches, Model chain B, native chain E1_4: 3 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 1 mismatches, Model chain A, native chain E2_4: 1 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain B, native chain E3_2: 5 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain B, native chain E3_3: 5 mismatches, Model chain A, native chain E3_4: 1 mismatches, Model chain B, native chain E3_4: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 1 mismatches, Model chain E, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain E, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 3 mismatches, Model chain E, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain C, native chain E1_3: 1 mismatches, Model chain C, native chain E1_4: 1 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain C, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain C, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 1 mismatches, Model chain C, native chain E2_3: 5 mismatches, Model chain A, native chain E2_4: 1 mismatches, Model chain C, native chain E2_4: 5 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 8 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain C, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain C, native chain E1_1: 8 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain C, native chain E1_3: 8 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain C, native chain E1_4: 8 mismatches, Model chain C, native chain E2_1: 4 mismatches, Model chain C, native chain E2_2: 4 mismatches, Model chain C, native chain E2_3: 4 mismatches, Model chain C, native chain E2_4: 4 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+
 84%|████████▎ | 260/311 [00:07<00:01, 37.27it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 86%|████████▌ | 266/311 [00:07<00:01, 41.51it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain C, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 9 mismatches, Model chain D, native chain E1_2: 9 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 8 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+
 89%|████████▉ | 277/311 [00:07<00:00, 54.73it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain D, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain D, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain C, native chain E1_3: 2 mismatches, Model chain C, native chain E1_4: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain D, native chain E1_3: 4 mismatches, Model chain D, native chain E1_4: 4 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E3_1: 4 mismatches, Model chain I, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 4 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain J, native chain E2_1: 4 mismatches, Model chain J, native chain E2_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 6 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain I, native chain E3: 7 mismatches, Model chain I, native chain E4: 5 mismatches, Model chain I, native chain E6: 5 mismatches
+if they should be treated as homologous.
+
 92%|█████████▏| 285/311 [00:07<00:00, 60.53it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain J, native chain E1_1: 9 mismatches, Model chain J, native chain E1_2: 9 mismatches, Model chain J, native chain E1_3: 9 mismatches, Model chain J, native chain E1_4: 9 mismatches, Model chain J, native chain E2_1: 8 mismatches, Model chain J, native chain E2_2: 8 mismatches, Model chain J, native chain E3: 5 mismatches, Model chain J, native chain E4: 9 mismatches, Model chain J, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain G, native chain E1_1: 7 mismatches, Model chain G, native chain E1_2: 7 mismatches, Model chain G, native chain E1_3: 7 mismatches, Model chain G, native chain E1_4: 7 mismatches, Model chain G, native chain E2_1: 6 mismatches, Model chain G, native chain E2_2: 6 mismatches, Model chain G, native chain E4: 8 mismatches, Model chain G, native chain E5: 5 mismatches, Model chain G, native chain E6: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain H, native chain E2_1: 8 mismatches, Model chain H, native chain E2_2: 8 mismatches, Model chain H, native chain E3: 7 mismatches, Model chain H, native chain E5: 8 mismatches, Model chain H, native chain E6: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain C, native chain E1_3: 7 mismatches, Model chain C, native chain E1_4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E2_1: 2 mismatches, Model chain C-2, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B-2, native chain E3_1: 2 mismatches, Model chain B-2, native chain E3_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8cs0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+
 94%|█████████▍| 292/311 [00:07<00:00, 44.78it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8cs0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+
 97%|█████████▋| 301/311 [00:08<00:00, 53.24it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 99%|█████████▉| 308/311 [00:08<00:00, 40.27it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 3 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain A, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 9 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain A, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
100%|██████████| 311/311 [00:09<00:00, 33.83it/s]
+Total results for interface_protein_dna: 300
+
  0%|          | 0/531 [00:00<?, ?it/s]
  0%|          | 1/531 [00:01<15:00,  1.70s/it]
  0%|          | 2/531 [00:01<07:17,  1.21it/s]
  1%|          | 3/531 [00:02<05:02,  1.75it/s]
  2%|▏         | 8/531 [00:02<01:20,  6.49it/s]
  2%|▏         | 11/531 [00:02<00:56,  9.21it/s]
  3%|▎         | 14/531 [00:02<00:43, 11.84it/s]
  3%|▎         | 17/531 [00:02<00:43, 11.72it/s]
  4%|▍         | 21/531 [00:03<00:36, 13.99it/s]
  4%|▍         | 23/531 [00:03<00:39, 12.95it/s]
  5%|▍         | 25/531 [00:03<00:36, 13.99it/s]
  5%|▌         | 27/531 [00:03<00:35, 14.06it/s]
  5%|▌         | 29/531 [00:03<00:52,  9.61it/s]
  6%|▌         | 31/531 [00:04<00:52,  9.61it/s]
  6%|▌         | 33/531 [00:04<01:01,  8.07it/s]
  7%|▋         | 35/531 [00:04<00:58,  8.50it/s]
  7%|▋         | 39/531 [00:04<00:41, 11.74it/s]
  8%|▊         | 41/531 [00:05<01:05,  7.43it/s]
  8%|▊         | 43/531 [00:05<00:57,  8.51it/s]
  8%|▊         | 45/531 [00:05<00:55,  8.75it/s]
  9%|▉         | 47/531 [00:05<00:53,  8.96it/s]
  9%|▉         | 50/531 [00:06<00:42, 11.20it/s]
 10%|▉         | 52/531 [00:06<00:42, 11.27it/s]
 10%|█         | 54/531 [00:06<00:50,  9.52it/s]
 11%|█         | 56/531 [00:06<00:53,  8.91it/s]
 11%|█         | 57/531 [00:07<01:09,  6.80it/s]
 11%|█▏        | 60/531 [00:07<00:47,  9.97it/s]
 12%|█▏        | 63/531 [00:07<00:40, 11.44it/s]
 12%|█▏        | 66/531 [00:07<00:32, 14.29it/s]
 13%|█▎        | 68/531 [00:07<00:47,  9.73it/s]
 13%|█▎        | 71/531 [00:08<00:36, 12.60it/s]
 14%|█▍        | 75/531 [00:08<00:37, 12.31it/s]
 15%|█▍        | 78/531 [00:08<00:31, 14.40it/s]
 15%|█▌        | 80/531 [00:08<00:34, 13.02it/s]
 15%|█▌        | 82/531 [00:09<01:05,  6.90it/s]
 16%|█▌        | 84/531 [00:09<00:58,  7.64it/s]
 17%|█▋        | 88/531 [00:09<00:40, 10.98it/s]
 17%|█▋        | 90/531 [00:09<00:36, 12.14it/s]
 18%|█▊        | 93/531 [00:10<00:30, 14.59it/s]
 18%|█▊        | 98/531 [00:10<00:29, 14.80it/s]
 19%|█▉        | 100/531 [00:10<00:35, 12.03it/s]
 19%|█▉        | 102/531 [00:10<00:34, 12.44it/s]
 20%|█▉        | 104/531 [00:10<00:33, 12.90it/s]
 20%|█▉        | 106/531 [00:11<00:46,  9.16it/s]
 20%|██        | 108/531 [00:11<00:42,  9.90it/s]
 21%|██        | 110/531 [00:11<00:37, 11.23it/s]
 21%|██        | 112/531 [00:11<00:42,  9.84it/s]
 21%|██▏       | 114/531 [00:12<00:46,  8.91it/s]
 22%|██▏       | 116/531 [00:12<00:40, 10.27it/s]
 22%|██▏       | 118/531 [00:12<00:42,  9.62it/s]
 23%|██▎       | 120/531 [00:12<00:40, 10.04it/s]
 23%|██▎       | 123/531 [00:12<00:41,  9.81it/s]
 24%|██▎       | 126/531 [00:13<00:32, 12.60it/s]
 24%|██▍       | 128/531 [00:13<00:39, 10.15it/s]
 24%|██▍       | 130/531 [00:13<00:39, 10.24it/s]
 25%|██▍       | 132/531 [00:13<00:35, 11.32it/s]
 25%|██▌       | 134/531 [00:13<00:36, 11.00it/s]
 26%|██▌       | 136/531 [00:14<00:33, 11.80it/s]
 26%|██▌       | 138/531 [00:14<00:33, 11.60it/s]
 27%|██▋       | 142/531 [00:14<00:35, 10.91it/s]
 27%|██▋       | 144/531 [00:14<00:38,  9.94it/s]
 28%|██▊       | 148/531 [00:15<00:52,  7.26it/s]
 28%|██▊       | 150/531 [00:15<00:45,  8.32it/s]
 29%|██▊       | 152/531 [00:15<00:44,  8.51it/s]
 29%|██▉       | 154/531 [00:16<00:38,  9.70it/s]
 29%|██▉       | 156/531 [00:16<00:35, 10.50it/s]
 30%|██▉       | 159/531 [00:16<00:32, 11.28it/s]
 31%|███       | 162/531 [00:16<00:26, 13.96it/s]
 31%|███       | 164/531 [00:16<00:28, 12.78it/s]
 31%|███▏      | 166/531 [00:17<00:33, 10.75it/s]
 32%|███▏      | 168/531 [00:17<00:42,  8.61it/s]
 32%|███▏      | 170/531 [00:17<00:47,  7.53it/s]
 32%|███▏      | 172/531 [00:17<00:44,  8.08it/s]
 33%|███▎      | 174/531 [00:18<00:37,  9.63it/s]
 33%|███▎      | 176/531 [00:18<00:39,  9.05it/s]
 34%|███▎      | 178/531 [00:18<00:38,  9.06it/s]
 34%|███▍      | 180/531 [00:18<00:34, 10.20it/s]
 34%|███▍      | 182/531 [00:18<00:33, 10.51it/s]
 35%|███▍      | 184/531 [00:19<00:35,  9.72it/s]
 35%|███▌      | 188/531 [00:19<00:24, 14.28it/s]
 36%|███▌      | 190/531 [00:19<00:29, 11.37it/s]
 36%|███▌      | 192/531 [00:19<00:41,  8.26it/s]
 37%|███▋      | 194/531 [00:20<00:35,  9.46it/s]
 37%|███▋      | 197/531 [00:20<00:28, 11.72it/s]
 37%|███▋      | 199/531 [00:20<00:34,  9.75it/s]
 38%|███▊      | 201/531 [00:20<00:30, 10.71it/s]
 38%|███▊      | 203/531 [00:20<00:34,  9.51it/s]
 39%|███▊      | 205/531 [00:21<00:42,  7.59it/s]
 39%|███▉      | 208/531 [00:21<00:31, 10.12it/s]
 40%|███▉      | 210/531 [00:21<00:31, 10.09it/s]
 40%|████      | 213/531 [00:21<00:27, 11.53it/s]
 40%|████      | 215/531 [00:22<00:40,  7.87it/s]
 41%|████      | 218/531 [00:22<00:30, 10.27it/s]
 41%|████▏     | 220/531 [00:22<00:35,  8.80it/s]
 42%|████▏     | 222/531 [00:22<00:30, 10.08it/s]
 42%|████▏     | 224/531 [00:23<00:26, 11.57it/s]
 43%|████▎     | 228/531 [00:23<00:19, 15.50it/s]
 43%|████▎     | 230/531 [00:23<00:26, 11.56it/s]
 44%|████▍     | 234/531 [00:23<00:20, 14.29it/s]
 44%|████▍     | 236/531 [00:23<00:21, 13.90it/s]
 45%|████▌     | 239/531 [00:24<00:25, 11.45it/s]
 45%|████▌     | 241/531 [00:24<00:31,  9.17it/s]
 46%|████▌     | 244/531 [00:24<00:28, 10.15it/s]
 46%|████▋     | 246/531 [00:25<00:31,  9.03it/s]
 47%|████▋     | 248/531 [00:25<00:30,  9.15it/s]
 47%|████▋     | 251/531 [00:25<00:30,  9.32it/s]
 48%|████▊     | 253/531 [00:25<00:25, 10.75it/s]
 48%|████▊     | 256/531 [00:25<00:20, 13.55it/s]
 49%|████▊     | 258/531 [00:25<00:20, 13.25it/s]
 49%|████▉     | 260/531 [00:26<00:21, 12.64it/s]
 49%|████▉     | 262/531 [00:26<00:27,  9.95it/s]
 50%|████▉     | 264/531 [00:26<00:29,  8.96it/s]
 50%|█████     | 266/531 [00:26<00:26, 10.17it/s]
 51%|█████     | 269/531 [00:27<00:20, 12.95it/s]
 51%|█████     | 271/531 [00:27<00:25, 10.26it/s]
 51%|█████▏    | 273/531 [00:27<00:32,  8.02it/s]
 52%|█████▏    | 275/531 [00:27<00:31,  8.01it/s]
 52%|█████▏    | 276/531 [00:28<00:35,  7.15it/s]
 52%|█████▏    | 278/531 [00:28<00:28,  8.93it/s]
 53%|█████▎    | 280/531 [00:28<00:25,  9.70it/s]
 53%|█████▎    | 282/531 [00:28<00:25,  9.93it/s]
 53%|█████▎    | 284/531 [00:29<00:30,  8.16it/s]
 54%|█████▎    | 285/531 [00:29<00:31,  7.73it/s]
 54%|█████▍    | 288/531 [00:29<00:23, 10.28it/s]
 55%|█████▍    | 290/531 [00:29<00:21, 10.97it/s]
 55%|█████▍    | 292/531 [00:29<00:25,  9.26it/s]
 55%|█████▌    | 294/531 [00:29<00:23, 10.17it/s]
 56%|█████▌    | 298/531 [00:30<00:19, 12.23it/s]
 56%|█████▋    | 300/531 [00:30<00:19, 11.77it/s]
 57%|█████▋    | 302/531 [00:31<00:35,  6.37it/s]
 57%|█████▋    | 305/531 [00:31<00:25,  8.70it/s]
 58%|█████▊    | 307/531 [00:31<00:25,  8.82it/s]
 58%|█████▊    | 309/531 [00:31<00:22,  9.72it/s]
 59%|█████▊    | 311/531 [00:31<00:23,  9.54it/s]
 59%|█████▉    | 314/531 [00:31<00:17, 12.40it/s]
 60%|█████▉    | 316/531 [00:32<00:19, 10.95it/s]
 61%|██████    | 324/531 [00:32<00:09, 21.84it/s]
 62%|██████▏   | 327/531 [00:32<00:12, 16.80it/s]
 62%|██████▏   | 330/531 [00:33<00:23,  8.74it/s]
 63%|██████▎   | 333/531 [00:33<00:21,  9.04it/s]
 63%|██████▎   | 335/531 [00:33<00:20,  9.43it/s]
 63%|██████▎   | 337/531 [00:34<00:19, 10.03it/s]
 64%|██████▍   | 339/531 [00:34<00:19, 10.03it/s]
 64%|██████▍   | 341/531 [00:34<00:18, 10.30it/s]
 65%|██████▍   | 343/531 [00:34<00:19,  9.60it/s]
 65%|██████▍   | 345/531 [00:34<00:18,  9.81it/s]
 65%|██████▌   | 347/531 [00:35<00:18,  9.97it/s]
 66%|██████▌   | 349/531 [00:35<00:22,  8.23it/s]
 66%|██████▌   | 351/531 [00:35<00:18,  9.71it/s]
 66%|██████▋   | 353/531 [00:35<00:18,  9.86it/s]
 67%|██████▋   | 355/531 [00:35<00:15, 11.47it/s]
 67%|██████▋   | 357/531 [00:35<00:14, 12.36it/s]
 68%|██████▊   | 360/531 [00:36<00:11, 15.22it/s]
 68%|██████▊   | 362/531 [00:36<00:17,  9.61it/s]
 69%|██████▊   | 364/531 [00:36<00:16,  9.96it/s]
 69%|██████▉   | 366/531 [00:37<00:27,  5.89it/s]
 69%|██████▉   | 368/531 [00:37<00:22,  7.22it/s]
 70%|██████▉   | 371/531 [00:37<00:15, 10.18it/s]
 70%|███████   | 374/531 [00:37<00:15, 10.30it/s]
 71%|███████   | 376/531 [00:38<00:17,  8.67it/s]
 71%|███████   | 378/531 [00:38<00:16,  9.23it/s]
 72%|███████▏  | 380/531 [00:38<00:21,  7.16it/s]
 72%|███████▏  | 382/531 [00:39<00:18,  8.01it/s]
 72%|███████▏  | 384/531 [00:39<00:16,  8.71it/s]
 73%|███████▎  | 386/531 [00:39<00:15,  9.58it/s]
 73%|███████▎  | 389/531 [00:39<00:14,  9.53it/s]
 74%|███████▎  | 391/531 [00:39<00:16,  8.68it/s]
 74%|███████▍  | 395/531 [00:40<00:11, 11.76it/s]
 75%|███████▍  | 397/531 [00:40<00:10, 12.41it/s]
 75%|███████▌  | 399/531 [00:40<00:12, 10.29it/s]
 76%|███████▌  | 401/531 [00:40<00:11, 10.86it/s]
 76%|███████▌  | 403/531 [00:40<00:13,  9.70it/s]
 76%|███████▋  | 405/531 [00:41<00:12,  9.74it/s]
 77%|███████▋  | 407/531 [00:41<00:13,  9.13it/s]
 77%|███████▋  | 410/531 [00:41<00:09, 12.22it/s]
 78%|███████▊  | 412/531 [00:41<00:12,  9.45it/s]
 78%|███████▊  | 415/531 [00:42<00:11, 10.34it/s]
 79%|███████▊  | 417/531 [00:42<00:12,  8.81it/s]
 79%|███████▉  | 419/531 [00:42<00:12,  8.62it/s]
 79%|███████▉  | 422/531 [00:42<00:10, 10.73it/s]
 80%|███████▉  | 424/531 [00:42<00:08, 12.11it/s]
 80%|████████  | 426/531 [00:43<00:09, 11.55it/s]
 81%|████████  | 429/531 [00:43<00:10, 10.19it/s]
 82%|████████▏ | 433/531 [00:43<00:06, 14.19it/s]
 82%|████████▏ | 435/531 [00:44<00:12,  7.89it/s]
 82%|████████▏ | 437/531 [00:44<00:13,  6.90it/s]
 83%|████████▎ | 439/531 [00:44<00:12,  7.19it/s]
 83%|████████▎ | 441/531 [00:45<00:11,  7.83it/s]
 84%|████████▎ | 444/531 [00:45<00:08, 10.33it/s]
 84%|████████▍ | 447/531 [00:45<00:07, 11.79it/s]
 85%|████████▍ | 450/531 [00:45<00:07, 11.24it/s]
 85%|████████▌ | 452/531 [00:46<00:08,  9.32it/s]
 85%|████████▌ | 454/531 [00:46<00:07, 10.27it/s]
 86%|████████▌ | 456/531 [00:46<00:07, 10.49it/s]
 86%|████████▋ | 458/531 [00:46<00:06, 10.68it/s]
 87%|████████▋ | 460/531 [00:47<00:11,  5.93it/s]
 87%|████████▋ | 462/531 [00:47<00:11,  6.27it/s]
 87%|████████▋ | 463/531 [00:47<00:12,  5.45it/s]
 88%|████████▊ | 466/531 [00:47<00:08,  7.75it/s]
 89%|████████▊ | 471/531 [00:48<00:04, 12.45it/s]
 89%|████████▉ | 473/531 [00:48<00:05, 11.43it/s]
 89%|████████▉ | 475/531 [00:48<00:06,  8.94it/s]
 90%|████████▉ | 477/531 [00:49<00:06,  8.70it/s]
 91%|█████████ | 482/531 [00:49<00:03, 13.10it/s]
 91%|█████████▏| 485/531 [00:49<00:02, 15.65it/s]
 92%|█████████▏| 488/531 [00:49<00:04, 10.33it/s]
 92%|█████████▏| 490/531 [00:50<00:05,  8.16it/s]
 93%|█████████▎| 493/531 [00:50<00:04,  8.84it/s]
 93%|█████████▎| 495/531 [00:50<00:04,  8.16it/s]
 94%|█████████▍| 498/531 [00:51<00:03,  8.91it/s]
 94%|█████████▍| 500/531 [00:51<00:05,  5.70it/s]
 94%|█████████▍| 501/531 [00:52<00:05,  5.75it/s]
 95%|█████████▍| 502/531 [00:52<00:05,  4.99it/s]
 95%|█████████▍| 503/531 [00:52<00:07,  3.94it/s]
 95%|█████████▌| 505/531 [00:53<00:06,  4.28it/s]
 95%|█████████▌| 507/531 [00:55<00:11,  2.15it/s]
 96%|█████████▌| 509/531 [00:55<00:07,  2.82it/s]
 96%|█████████▌| 511/531 [00:55<00:06,  2.96it/s]
 96%|█████████▋| 512/531 [00:56<00:07,  2.70it/s]
 97%|█████████▋| 513/531 [00:59<00:16,  1.12it/s]
 97%|█████████▋| 514/531 [00:59<00:13,  1.22it/s]
 97%|█████████▋| 515/531 [01:00<00:11,  1.38it/s]
 97%|█████████▋| 516/531 [01:00<00:09,  1.52it/s]
 97%|█████████▋| 517/531 [01:01<00:09,  1.49it/s]
 98%|█████████▊| 518/531 [01:04<00:17,  1.38s/it]
 98%|█████████▊| 519/531 [01:05<00:13,  1.14s/it]
 98%|█████████▊| 520/531 [01:05<00:10,  1.02it/s]
 98%|█████████▊| 521/531 [01:06<00:07,  1.32it/s]
 98%|█████████▊| 522/531 [01:07<00:09,  1.08s/it]
 98%|█████████▊| 523/531 [01:10<00:12,  1.59s/it]
 99%|█████████▊| 524/531 [01:10<00:08,  1.16s/it]
 99%|█████████▉| 525/531 [01:18<00:18,  3.12s/it]
 99%|█████████▉| 526/531 [01:20<00:14,  2.85s/it]
 99%|█████████▉| 527/531 [01:28<00:16,  4.24s/it]
 99%|█████████▉| 528/531 [01:29<00:10,  3.35s/it]
100%|█████████▉| 529/531 [01:47<00:15,  7.74s/it]
100%|█████████▉| 530/531 [01:50<00:06,  6.44s/it]
100%|██████████| 531/531 [01:54<00:00,  5.57s/it]
100%|██████████| 531/531 [01:54<00:00,  4.64it/s]
+
  0%|          | 0/531 [00:00<?, ?it/s]
100%|██████████| 531/531 [00:00<00:00, 12000.58it/s]
+Total results for interface_protein_ligand: 531
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/logs/inference/verifier.log b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/logs/inference/verifier.log
new file mode 100644
index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/report.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/report.json
new file mode 100644
index 0000000000000000000000000000000000000000..09fe7d4fb41bd82929bef364eba10944736670ff
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/report.json
@@ -0,0 +1,69 @@
+{
+  "accepted_predictions": 1424,
+  "benchmark_visible_during_development": true,
+  "evaluation_mode": "model_replay",
+  "expected_predictions": 1448,
+  "invalid_predictions": [],
+  "label_isolated_sandbox": false,
+  "missing_or_invalid_predictions": 24,
+  "requests": 1448,
+  "reward": 0.011987119006992543,
+  "reward_definition": "unweighted mean of the per-track scores in reward.json",
+  "suite_manifest_sha256": "15ca32c737d8548f62cc7e6a237151ae6c15a079b6910e674c279f6d15bb6104",
+  "tracks": {
+    "interface_antibody_antigen": {
+      "finite_targets": 147,
+      "missing_or_invalid": 8,
+      "score": 0.0,
+      "targets": 155
+    },
+    "interface_protein_dna": {
+      "finite_targets": 300,
+      "missing_or_invalid": 11,
+      "score": 0.0,
+      "targets": 311
+    },
+    "interface_protein_ligand": {
+      "finite_targets": 483,
+      "missing_or_invalid": 65,
+      "score": 0.0,
+      "targets": 548
+    },
+    "interface_protein_peptide": {
+      "finite_targets": 35,
+      "missing_or_invalid": 6,
+      "score": 0.024390243902439025,
+      "targets": 41
+    },
+    "interface_protein_protein": {
+      "finite_targets": 236,
+      "missing_or_invalid": 25,
+      "score": 0.0,
+      "targets": 261
+    },
+    "interface_protein_rna": {
+      "finite_targets": 51,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 51
+    },
+    "monomer_dna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.0014166666666666668,
+      "targets": 12
+    },
+    "monomer_protein": {
+      "finite_targets": 322,
+      "missing_or_invalid": 2,
+      "score": 0.07941049382716052,
+      "targets": 324
+    },
+    "monomer_rna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.0026666666666666666,
+      "targets": 12
+    }
+  }
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/reward.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/reward.json
new file mode 100644
index 0000000000000000000000000000000000000000..744e528ab871bc3212e7e1360362574c4e832d6b
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/reward.json
@@ -0,0 +1,12 @@
+{
+  "interface_antibody_antigen": 0.0,
+  "interface_protein_dna": 0.0,
+  "interface_protein_ligand": 0.0,
+  "interface_protein_peptide": 0.024390243902439025,
+  "interface_protein_protein": 0.0,
+  "interface_protein_rna": 0.0,
+  "monomer_dna": 0.0014166666666666668,
+  "monomer_protein": 0.07941049382716052,
+  "monomer_rna": 0.0026666666666666666,
+  "reward": 0.011987119006992543
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/logs/inference/results/scoring.log b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/logs/inference/results/scoring.log
new file mode 100644
index 0000000000000000000000000000000000000000..416a8c05532dd7464b171eb22f56875d5ee1abdf
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/logs/inference/results/scoring.log
@@ -0,0 +1,1148 @@
+WARNING:root:Invoking DockQ as script rather than binary. This will slow down computations.
+
  0%|          | 0/322 [00:00<?, ?it/s]
  0%|          | 1/322 [00:02<10:42,  2.00s/it]
  1%|          | 2/322 [00:02<05:15,  1.01it/s]
  1%|          | 4/322 [00:02<02:14,  2.37it/s]
  3%|▎         | 9/322 [00:02<00:45,  6.92it/s]
  4%|▍         | 13/322 [00:02<00:28, 10.74it/s]
  5%|▌         | 17/322 [00:02<00:21, 14.16it/s]
  7%|▋         | 22/322 [00:02<00:15, 19.38it/s]
  8%|▊         | 26/322 [00:03<00:21, 13.69it/s]
  9%|▉         | 29/322 [00:04<00:34,  8.58it/s]
 10%|▉         | 31/322 [00:04<00:33,  8.77it/s]
 11%|█         | 35/322 [00:04<00:23, 11.96it/s]
 12%|█▏        | 38/322 [00:04<00:20, 14.10it/s]
 13%|█▎        | 42/322 [00:04<00:16, 16.85it/s]
 14%|█▍        | 45/322 [00:04<00:15, 18.32it/s]
 15%|█▍        | 48/322 [00:05<00:21, 12.67it/s]
 16%|█▌        | 50/322 [00:05<00:23, 11.43it/s]
 16%|█▌        | 52/322 [00:05<00:25, 10.70it/s]
 18%|█▊        | 57/322 [00:05<00:18, 14.22it/s]
 19%|█▊        | 60/322 [00:06<00:15, 16.65it/s]
 20%|█▉        | 63/322 [00:06<00:14, 18.29it/s]
 20%|██        | 66/322 [00:06<00:14, 18.19it/s]
 21%|██▏       | 69/322 [00:06<00:15, 16.23it/s]
 22%|██▏       | 71/322 [00:06<00:21, 11.77it/s]
 23%|██▎       | 73/322 [00:07<00:37,  6.62it/s]
 24%|██▍       | 78/322 [00:07<00:22, 10.96it/s]
 26%|██▌       | 83/322 [00:07<00:15, 15.05it/s]
 27%|██▋       | 86/322 [00:08<00:14, 15.84it/s]
 28%|██▊       | 90/322 [00:08<00:12, 18.94it/s]
 30%|███       | 97/322 [00:08<00:08, 25.59it/s]
 31%|███▏      | 101/322 [00:09<00:16, 13.45it/s]
 32%|███▏      | 104/322 [00:09<00:17, 12.14it/s]
 33%|███▎      | 107/322 [00:09<00:16, 13.17it/s]
 34%|███▍      | 109/322 [00:09<00:18, 11.71it/s]
 34%|███▍      | 111/322 [00:09<00:19, 11.03it/s]
 35%|███▌      | 113/322 [00:10<00:24,  8.49it/s]
 36%|███▌      | 115/322 [00:10<00:20,  9.89it/s]
 37%|███▋      | 120/322 [00:10<00:13, 14.99it/s]
 38%|███▊      | 123/322 [00:10<00:13, 14.96it/s]
 39%|███▉      | 125/322 [00:10<00:13, 14.93it/s]
 39%|███▉      | 127/322 [00:11<00:16, 12.17it/s]
 40%|████      | 130/322 [00:11<00:15, 12.59it/s]
 41%|████      | 132/322 [00:11<00:16, 11.20it/s]
 42%|████▏     | 134/322 [00:11<00:17, 10.89it/s]
 42%|████▏     | 136/322 [00:12<00:15, 11.77it/s]
 43%|████▎     | 140/322 [00:12<00:11, 15.41it/s]
 44%|████▍     | 142/322 [00:12<00:13, 13.68it/s]
 45%|████▍     | 144/322 [00:12<00:15, 11.58it/s]
 46%|████▌     | 147/322 [00:12<00:12, 13.64it/s]
 47%|████▋     | 151/322 [00:12<00:09, 18.46it/s]
 48%|████▊     | 154/322 [00:13<00:09, 16.89it/s]
 49%|████▉     | 157/322 [00:13<00:08, 19.14it/s]
 50%|████▉     | 160/322 [00:13<00:12, 12.74it/s]
 50%|█████     | 162/322 [00:13<00:12, 13.28it/s]
 51%|█████     | 164/322 [00:14<00:14, 10.64it/s]
 52%|█████▏    | 167/322 [00:14<00:12, 12.91it/s]
 52%|█████▏    | 169/322 [00:14<00:11, 13.14it/s]
 53%|█████▎    | 171/322 [00:14<00:13, 11.44it/s]
 54%|█████▍    | 175/322 [00:14<00:09, 15.29it/s]
 55%|█████▍    | 177/322 [00:14<00:09, 15.16it/s]
 56%|█████▌    | 179/322 [00:15<00:09, 14.67it/s]
 56%|█████▌    | 181/322 [00:15<00:12, 10.85it/s]
 57%|█████▋    | 183/322 [00:15<00:14,  9.30it/s]
 57%|█████▋    | 185/322 [00:15<00:13, 10.19it/s]
 58%|█████▊    | 187/322 [00:15<00:13, 10.00it/s]
 59%|█████▊    | 189/322 [00:16<00:12, 10.32it/s]
 60%|██████    | 194/322 [00:16<00:08, 15.42it/s]
 61%|██████    | 196/322 [00:16<00:09, 13.01it/s]
 62%|██████▏   | 200/322 [00:16<00:07, 15.97it/s]
 63%|██████▎   | 203/322 [00:16<00:06, 17.97it/s]
 64%|██████▎   | 205/322 [00:16<00:06, 17.80it/s]
 64%|██████▍   | 207/322 [00:17<00:13,  8.75it/s]
 65%|██████▌   | 210/322 [00:17<00:11,  9.88it/s]
 66%|██████▌   | 212/322 [00:18<00:15,  7.11it/s]
 66%|██████▋   | 214/322 [00:18<00:13,  8.21it/s]
 68%|██████▊   | 220/322 [00:18<00:07, 14.25it/s]
 70%|███████   | 226/322 [00:18<00:05, 17.35it/s]
 71%|███████   | 229/322 [00:19<00:06, 14.76it/s]
 73%|███████▎  | 235/322 [00:19<00:04, 20.86it/s]
 74%|███████▍  | 238/322 [00:19<00:04, 19.60it/s]
 75%|███████▍  | 241/322 [00:20<00:07, 11.04it/s]
 75%|███████▌  | 243/322 [00:20<00:07, 11.10it/s]
 76%|███████▌  | 245/322 [00:20<00:07, 10.12it/s]
 77%|███████▋  | 248/322 [00:20<00:06, 11.09it/s]
 78%|███████▊  | 252/322 [00:20<00:04, 14.31it/s]
 79%|███████▉  | 255/322 [00:20<00:04, 16.30it/s]
 80%|████████  | 259/322 [00:21<00:03, 19.95it/s]
 81%|████████▏ | 262/322 [00:21<00:03, 16.56it/s]
 82%|████████▏ | 265/322 [00:21<00:03, 16.00it/s]
 83%|████████▎ | 268/322 [00:21<00:03, 15.46it/s]
 85%|████████▌ | 274/322 [00:22<00:02, 17.80it/s]
 86%|████████▌ | 277/322 [00:22<00:02, 16.62it/s]
 87%|████████▋ | 281/322 [00:22<00:02, 18.55it/s]
 89%|████████▊ | 285/322 [00:22<00:01, 22.19it/s]
 89%|████████▉ | 288/322 [00:22<00:01, 22.23it/s]
 91%|█████████ | 292/322 [00:22<00:01, 25.82it/s]
 92%|█████████▏| 295/322 [00:22<00:01, 23.61it/s]
 93%|█████████▎| 300/322 [00:23<00:00, 26.85it/s]
 94%|█████████▍| 304/322 [00:23<00:00, 29.37it/s]
 96%|█████████▌| 308/322 [00:23<00:00, 20.41it/s]
 97%|█████████▋| 311/322 [00:24<00:01,  8.86it/s]
 97%|█████████▋| 313/322 [00:24<00:01,  8.75it/s]
 98%|█████████▊| 315/322 [00:25<00:00,  7.78it/s]
 98%|█████████▊| 317/322 [00:25<00:00,  5.91it/s]
 99%|█████████▉| 318/322 [00:25<00:00,  5.45it/s]
 99%|█████████▉| 319/322 [00:26<00:00,  3.29it/s]
100%|█████████▉| 321/322 [00:29<00:00,  1.62it/s]
100%|██████████| 322/322 [00:51<00:00,  4.68s/it]
100%|██████████| 322/322 [00:51<00:00,  6.25it/s]
+
  0%|          | 0/322 [00:00<?, ?it/s]
100%|██████████| 322/322 [00:00<00:00, 21092.05it/s]
+Total results for monomer_protein: 322
+
  0%|          | 0/12 [00:00<?, ?it/s]
  8%|▊         | 1/12 [00:00<00:08,  1.35it/s]
 25%|██▌       | 3/12 [00:00<00:02,  4.35it/s]
 67%|██████▋   | 8/12 [00:00<00:00, 11.66it/s]
 92%|█████████▏| 11/12 [00:01<00:00,  5.92it/s]
100%|██████████| 12/12 [00:02<00:00,  4.03it/s]
+
  0%|          | 0/12 [00:00<?, ?it/s]
100%|██████████| 12/12 [00:00<00:00, 1004.10it/s]
+Total results for monomer_rna: 12
+
  0%|          | 0/12 [00:00<?, ?it/s]
  8%|▊         | 1/12 [00:00<00:07,  1.42it/s]
 50%|█████     | 6/12 [00:00<00:00,  9.03it/s]
100%|██████████| 12/12 [00:01<00:00, 14.55it/s]
100%|██████████| 12/12 [00:01<00:00, 11.04it/s]
+
  0%|          | 0/12 [00:00<?, ?it/s]
100%|██████████| 12/12 [00:00<00:00, 7169.75it/s]
+Total results for monomer_dna: 12
+
  0%|          | 0/251 [00:00<?, ?it/s]
  0%|          | 1/251 [00:02<08:26,  2.03s/it]
  1%|          | 3/251 [00:02<02:20,  1.76it/s]
  2%|▏         | 6/251 [00:02<00:58,  4.17it/s]
  3%|▎         | 8/251 [00:02<00:42,  5.72it/s]
  4%|▍         | 10/251 [00:02<00:37,  6.49it/s]
  5%|▍         | 12/251 [00:03<00:46,  5.16it/s]
  6%|▌         | 14/251 [00:03<00:50,  4.70it/s]
  6%|▋         | 16/251 [00:03<00:46,  5.01it/s]
  7%|▋         | 18/251 [00:04<00:36,  6.39it/s]
  8%|▊         | 21/251 [00:04<00:37,  6.20it/s]
  9%|▉         | 23/251 [00:04<00:32,  7.10it/s]
 10%|▉         | 24/251 [00:04<00:31,  7.28it/s]
 10%|▉         | 25/251 [00:05<00:29,  7.60it/s]
 11%|█         | 27/251 [00:05<00:29,  7.55it/s]
 12%|█▏        | 29/251 [00:05<00:23,  9.33it/s]
 12%|█▏        | 31/251 [00:05<00:33,  6.48it/s]
 14%|█▎        | 34/251 [00:06<00:25,  8.59it/s]
 14%|█▍        | 36/251 [00:06<00:22,  9.35it/s]
 16%|█▌        | 39/251 [00:06<00:27,  7.71it/s]
 17%|█▋        | 42/251 [00:06<00:23,  9.08it/s]
 18%|█▊        | 44/251 [00:07<00:21,  9.47it/s]
 18%|█▊        | 46/251 [00:07<00:19, 10.76it/s]
 19%|█▉        | 48/251 [00:07<00:22,  9.21it/s]
 20%|█▉        | 50/251 [00:07<00:26,  7.58it/s]
 21%|██        | 52/251 [00:08<00:22,  8.90it/s]
 22%|██▏       | 54/251 [00:08<00:20,  9.52it/s]
 22%|██▏       | 56/251 [00:08<00:26,  7.48it/s]
 24%|██▎       | 59/251 [00:08<00:23,  8.12it/s]
 24%|██▍       | 61/251 [00:09<00:19,  9.53it/s]
 25%|██▌       | 63/251 [00:09<00:17, 10.73it/s]
 26%|██▌       | 65/251 [00:09<00:24,  7.68it/s]
 27%|██▋       | 67/251 [00:10<00:26,  6.84it/s]
 28%|██▊       | 70/251 [00:10<00:23,  7.77it/s]
 28%|██▊       | 71/251 [00:10<00:25,  7.09it/s]
 29%|██▊       | 72/251 [00:10<00:26,  6.76it/s]
 30%|██▉       | 75/251 [00:10<00:19,  8.89it/s]
 30%|███       | 76/251 [00:11<00:22,  7.75it/s]
 31%|███▏      | 79/251 [00:11<00:17, 10.06it/s]
 32%|███▏      | 81/251 [00:11<00:14, 11.35it/s]
 33%|███▎      | 83/251 [00:11<00:20,  8.18it/s]
 34%|███▍      | 85/251 [00:12<00:20,  8.01it/s]
 35%|███▍      | 87/251 [00:12<00:21,  7.58it/s]
 36%|███▌      | 90/251 [00:12<00:15, 10.09it/s]
 37%|███▋      | 92/251 [00:12<00:15, 10.47it/s]
 37%|███▋      | 94/251 [00:13<00:21,  7.20it/s]
 38%|███▊      | 95/251 [00:13<00:21,  7.10it/s]
 39%|███▉      | 99/251 [00:13<00:15, 10.13it/s]
 41%|████      | 102/251 [00:14<00:17,  8.45it/s]
 41%|████▏     | 104/251 [00:14<00:16,  9.09it/s]
 42%|████▏     | 106/251 [00:14<00:16,  8.97it/s]
 43%|████▎     | 109/251 [00:14<00:17,  8.29it/s]
 44%|████▍     | 111/251 [00:15<00:14,  9.38it/s]
 45%|████▌     | 114/251 [00:15<00:12, 11.11it/s]
 46%|████▌     | 116/251 [00:15<00:13, 10.03it/s]
 47%|████▋     | 118/251 [00:15<00:17,  7.59it/s]
 47%|████▋     | 119/251 [00:16<00:17,  7.45it/s]
 48%|████▊     | 121/251 [00:16<00:14,  8.75it/s]
 50%|████▉     | 125/251 [00:16<00:11, 10.77it/s]
 51%|█████     | 127/251 [00:16<00:13,  8.89it/s]
 51%|█████▏    | 129/251 [00:16<00:12,  9.82it/s]
 52%|█████▏    | 131/251 [00:17<00:14,  8.41it/s]
 53%|█████▎    | 133/251 [00:17<00:12,  9.14it/s]
 54%|█████▍    | 135/251 [00:17<00:11,  9.98it/s]
 55%|█████▍    | 137/251 [00:17<00:09, 11.59it/s]
 55%|█████▌    | 139/251 [00:18<00:20,  5.40it/s]
 57%|█████▋    | 144/251 [00:18<00:12,  8.84it/s]
 58%|█████▊    | 146/251 [00:19<00:13,  7.55it/s]
 61%|██████    | 152/251 [00:19<00:09, 10.99it/s]
 61%|██████▏   | 154/251 [00:19<00:08, 11.28it/s]
 62%|██████▏   | 156/251 [00:19<00:09, 10.36it/s]
 63%|██████▎   | 158/251 [00:20<00:13,  6.95it/s]
 64%|██████▍   | 161/251 [00:20<00:09,  9.09it/s]
 65%|██████▍   | 163/251 [00:20<00:08, 10.11it/s]
 66%|██████▌   | 165/251 [00:21<00:09,  8.82it/s]
 67%|██████▋   | 167/251 [00:21<00:11,  7.63it/s]
 67%|██████▋   | 169/251 [00:21<00:10,  7.69it/s]
 69%|██████▊   | 172/251 [00:21<00:08,  8.80it/s]
 69%|██████▉   | 174/251 [00:22<00:09,  8.38it/s]
 71%|███████   | 178/251 [00:22<00:05, 12.34it/s]
 73%|███████▎  | 182/251 [00:22<00:04, 14.05it/s]
 73%|███████▎  | 184/251 [00:22<00:05, 12.77it/s]
 74%|███████▍  | 186/251 [00:23<00:06, 10.23it/s]
 75%|███████▌  | 189/251 [00:23<00:05, 11.36it/s]
 77%|███████▋  | 193/251 [00:23<00:04, 12.11it/s]
 78%|███████▊  | 195/251 [00:23<00:04, 11.55it/s]
 78%|███████▊  | 197/251 [00:23<00:04, 11.12it/s]
 79%|███████▉  | 199/251 [00:24<00:04, 12.52it/s]
 80%|████████  | 202/251 [00:24<00:03, 15.15it/s]
 82%|████████▏ | 205/251 [00:24<00:03, 12.89it/s]
 82%|████████▏ | 207/251 [00:24<00:03, 13.78it/s]
 85%|████████▍ | 213/251 [00:24<00:01, 20.89it/s]
 86%|████████▌ | 216/251 [00:25<00:02, 14.97it/s]
 88%|████████▊ | 220/251 [00:25<00:01, 16.92it/s]
 89%|████████▉ | 223/251 [00:25<00:02, 12.83it/s]
 90%|████████▉ | 225/251 [00:26<00:03,  8.19it/s]
 90%|█████████ | 227/251 [00:26<00:02,  8.37it/s]
 91%|█████████ | 229/251 [00:26<00:02,  8.26it/s]
 92%|█████████▏| 231/251 [00:27<00:02,  7.37it/s]
 93%|█████████▎| 234/251 [00:27<00:02,  6.14it/s]
 94%|█████████▍| 236/251 [00:28<00:03,  4.33it/s]
 94%|█████████▍| 237/251 [00:28<00:03,  4.61it/s]
 95%|█████████▍| 238/251 [00:29<00:05,  2.53it/s]
 95%|█████████▌| 239/251 [00:30<00:04,  2.88it/s]
 96%|█████████▌| 240/251 [00:30<00:04,  2.63it/s]
 96%|█████████▌| 241/251 [00:31<00:05,  1.87it/s]
 96%|█████████▋| 242/251 [00:31<00:03,  2.29it/s]
 97%|█████████▋| 243/251 [00:32<00:03,  2.53it/s]
 97%|█████████▋| 244/251 [00:33<00:04,  1.56it/s]
 98%|█████████▊| 245/251 [00:33<00:03,  1.87it/s]
 98%|█████████▊| 246/251 [00:34<00:03,  1.44it/s]
 98%|█████████▊| 247/251 [00:38<00:05,  1.48s/it]
 99%|█████████▉| 248/251 [00:38<00:03,  1.27s/it]
100%|█████████▉| 250/251 [00:50<00:03,  3.30s/it]
100%|██████████| 251/251 [00:57<00:00,  4.15s/it]
100%|██████████| 251/251 [00:57<00:00,  4.40it/s]
+
  0%|          | 0/251 [00:00<?, ?it/s]
100%|██████████| 251/251 [00:00<00:00, 10280.96it/s]
+Total results for interface_protein_protein: 251
+
  0%|          | 0/154 [00:00<?, ?it/s]
  1%|          | 1/154 [00:02<06:15,  2.45s/it]
  1%|▏         | 2/154 [00:02<03:01,  1.19s/it]
  2%|▏         | 3/154 [00:03<02:25,  1.04it/s]
  3%|▎         | 5/154 [00:03<01:24,  1.77it/s]
  4%|▍         | 6/154 [00:04<01:03,  2.31it/s]
  5%|▍         | 7/154 [00:04<01:12,  2.01it/s]
  6%|▌         | 9/154 [00:04<00:45,  3.17it/s]
  8%|▊         | 13/154 [00:05<00:23,  5.93it/s]
  9%|▉         | 14/154 [00:05<00:23,  6.03it/s]
 10%|▉         | 15/154 [00:05<00:23,  5.86it/s]
 11%|█         | 17/154 [00:06<00:28,  4.85it/s]
 12%|█▏        | 19/154 [00:06<00:20,  6.49it/s]
 14%|█▎        | 21/154 [00:06<00:17,  7.73it/s]
 15%|█▍        | 23/154 [00:06<00:15,  8.20it/s]
 16%|█▌        | 25/154 [00:06<00:14,  8.63it/s]
 18%|█▊        | 27/154 [00:06<00:14,  8.83it/s]
 19%|█▉        | 29/154 [00:07<00:12,  9.94it/s]
 21%|██        | 32/154 [00:07<00:12,  9.97it/s]
 22%|██▏       | 34/154 [00:07<00:14,  8.51it/s]
 23%|██▎       | 36/154 [00:07<00:12,  9.42it/s]
 25%|██▍       | 38/154 [00:08<00:12,  9.43it/s]
 26%|██▌       | 40/154 [00:08<00:11, 10.22it/s]
 28%|██▊       | 43/154 [00:08<00:10, 10.24it/s]
 30%|██▉       | 46/154 [00:08<00:08, 12.64it/s]
 31%|███       | 48/154 [00:09<00:14,  7.32it/s]
 33%|███▎      | 51/154 [00:09<00:11,  8.98it/s]
 34%|███▍      | 53/154 [00:09<00:10,  9.92it/s]
 36%|███▋      | 56/154 [00:09<00:09, 10.87it/s]
 38%|███▊      | 58/154 [00:09<00:08, 11.42it/s]
 39%|███▉      | 60/154 [00:10<00:15,  5.91it/s]
 40%|████      | 62/154 [00:11<00:14,  6.17it/s]
 41%|████      | 63/154 [00:11<00:20,  4.54it/s]
 42%|████▏     | 65/154 [00:11<00:16,  5.42it/s]
 44%|████▎     | 67/154 [00:11<00:13,  6.40it/s]
 44%|████▍     | 68/154 [00:12<00:12,  6.74it/s]
 45%|████▍     | 69/154 [00:12<00:12,  6.62it/s]
 45%|████▌     | 70/154 [00:12<00:14,  5.81it/s]
 47%|████▋     | 73/154 [00:12<00:10,  7.37it/s]
 49%|████▊     | 75/154 [00:13<00:11,  6.65it/s]
 49%|████▉     | 76/154 [00:13<00:12,  6.28it/s]
 51%|█████▏    | 79/154 [00:13<00:12,  6.22it/s]
 53%|█████▎    | 81/154 [00:13<00:09,  7.68it/s]
 53%|█████▎    | 82/154 [00:14<00:09,  7.20it/s]
 54%|█████▍    | 83/154 [00:14<00:11,  5.94it/s]
 55%|█████▍    | 84/154 [00:14<00:13,  5.19it/s]
 56%|█████▋    | 87/154 [00:14<00:08,  8.17it/s]
 58%|█████▊    | 89/154 [00:15<00:13,  4.84it/s]
 58%|█████▊    | 90/154 [00:15<00:14,  4.38it/s]
 60%|█████▉    | 92/154 [00:16<00:10,  5.67it/s]
 60%|██████    | 93/154 [00:16<00:10,  5.93it/s]
 62%|██████▏   | 95/154 [00:16<00:09,  6.24it/s]
 64%|██████▎   | 98/154 [00:16<00:05,  9.52it/s]
 65%|██████▍   | 100/154 [00:16<00:05,  9.70it/s]
 67%|██████▋   | 103/154 [00:16<00:04, 11.53it/s]
 68%|██████▊   | 105/154 [00:17<00:04, 12.20it/s]
 70%|███████   | 108/154 [00:17<00:03, 13.26it/s]
 71%|███████▏  | 110/154 [00:17<00:03, 11.80it/s]
 73%|███████▎  | 112/154 [00:18<00:05,  7.04it/s]
 74%|███████▍  | 114/154 [00:18<00:05,  6.79it/s]
 76%|███████▌  | 117/154 [00:18<00:04,  7.49it/s]
 78%|███████▊  | 120/154 [00:18<00:03,  9.14it/s]
 79%|███████▉  | 122/154 [00:19<00:03, 10.44it/s]
 81%|████████  | 124/154 [00:19<00:03,  8.98it/s]
 82%|████████▏ | 127/154 [00:19<00:02, 11.03it/s]
 84%|████████▍ | 129/154 [00:19<00:02, 12.28it/s]
 85%|████████▌ | 131/154 [00:19<00:01, 13.39it/s]
 86%|████████▋ | 133/154 [00:20<00:01, 11.46it/s]
 88%|████████▊ | 135/154 [00:20<00:01, 10.78it/s]
 90%|████████▉ | 138/154 [00:20<00:01,  9.39it/s]
 92%|█████████▏| 141/154 [00:21<00:01,  8.55it/s]
 92%|█████████▏| 142/154 [00:21<00:01,  8.29it/s]
 93%|█████████▎| 143/154 [00:21<00:01,  8.27it/s]
 94%|█████████▎| 144/154 [00:21<00:01,  7.10it/s]
 94%|█████████▍| 145/154 [00:21<00:01,  5.37it/s]
 95%|█████████▌| 147/154 [00:22<00:01,  5.20it/s]
 96%|█████████▌| 148/154 [00:22<00:01,  4.86it/s]
 97%|█████████▋| 149/154 [00:22<00:01,  4.62it/s]
 97%|█████████▋| 150/154 [00:23<00:01,  3.02it/s]
 98%|█████████▊| 151/154 [00:25<00:02,  1.23it/s]
 99%|█████████▊| 152/154 [00:26<00:01,  1.29it/s]
 99%|█████████▉| 153/154 [00:26<00:00,  1.46it/s]
100%|██████████| 154/154 [00:27<00:00,  1.70it/s]
100%|██████████| 154/154 [00:27<00:00,  5.68it/s]
+
  0%|          | 0/154 [00:00<?, ?it/s]
100%|██████████| 154/154 [00:00<00:00, 9902.39it/s]
+Total results for interface_antibody_antigen: 154
+
  0%|          | 0/41 [00:00<?, ?it/s]
 10%|▉         | 4/41 [00:01<00:14,  2.49it/s]
 12%|█▏        | 5/41 [00:02<00:16,  2.22it/s]
 17%|█▋        | 7/41 [00:02<00:10,  3.30it/s]
 20%|█▉        | 8/41 [00:02<00:09,  3.66it/s]
 22%|██▏       | 9/41 [00:02<00:08,  3.82it/s]
 24%|██▍       | 10/41 [00:03<00:11,  2.80it/s]
 29%|██▉       | 12/41 [00:03<00:09,  3.18it/s]
 37%|███▋      | 15/41 [00:04<00:04,  5.53it/s]
 41%|████▏     | 17/41 [00:04<00:03,  6.40it/s]
 46%|████▋     | 19/41 [00:04<00:03,  6.62it/s]
 54%|█████▎    | 22/41 [00:04<00:02,  9.49it/s]
 59%|█████▊    | 24/41 [00:05<00:02,  6.30it/s]
 63%|██████▎   | 26/41 [00:06<00:03,  4.26it/s]
 66%|██████▌   | 27/41 [00:06<00:03,  3.68it/s]
 68%|██████▊   | 28/41 [00:07<00:04,  2.61it/s]
 71%|███████   | 29/41 [00:07<00:04,  2.82it/s]
 73%|███████▎  | 30/41 [00:08<00:04,  2.46it/s]
 76%|███████▌  | 31/41 [00:08<00:03,  2.87it/s]
 78%|███████▊  | 32/41 [00:08<00:02,  3.53it/s]
 80%|████████  | 33/41 [00:08<00:02,  3.63it/s]
 88%|████████▊ | 36/41 [00:08<00:00,  6.61it/s]
 93%|█████████▎| 38/41 [00:09<00:00,  5.90it/s]
 95%|█████████▌| 39/41 [00:14<00:02,  1.09s/it]
 98%|█████████▊| 40/41 [00:14<00:00,  1.12it/s]
100%|██████████| 41/41 [00:15<00:00,  1.16it/s]
100%|██████████| 41/41 [00:15<00:00,  2.71it/s]
+
  0%|          | 0/41 [00:00<?, ?it/s]
100%|██████████| 41/41 [00:00<00:00, 3103.75it/s]
+Total results for interface_protein_peptide: 41
+
  0%|          | 0/51 [00:00<?, ?it/s]
  6%|▌         | 3/51 [00:02<00:32,  1.46it/s]
  8%|▊         | 4/51 [00:02<00:23,  2.01it/s]
 18%|█▊        | 9/51 [00:02<00:07,  5.63it/s]
 22%|██▏       | 11/51 [00:02<00:06,  6.44it/s]
 25%|██▌       | 13/51 [00:02<00:05,  6.56it/s]
 29%|██▉       | 15/51 [00:03<00:06,  5.33it/s]
 35%|███▌      | 18/51 [00:03<00:06,  5.28it/s]
 37%|███▋      | 19/51 [00:04<00:05,  5.62it/s]
 41%|████      | 21/51 [00:04<00:04,  6.60it/s]
 43%|████▎     | 22/51 [00:04<00:04,  6.15it/s]
 47%|████▋     | 24/51 [00:04<00:03,  7.53it/s]
 49%|████▉     | 25/51 [00:04<00:04,  6.00it/s]
 51%|█████     | 26/51 [00:05<00:04,  5.43it/s]
 53%|█████▎    | 27/51 [00:05<00:04,  5.98it/s]
 55%|█████▍    | 28/51 [00:05<00:03,  6.52it/s]
 61%|██████    | 31/51 [00:05<00:02,  8.80it/s]
 63%|██████▎   | 32/51 [00:05<00:02,  7.09it/s]
 65%|██████▍   | 33/51 [00:06<00:02,  6.20it/s]
 67%|██████▋   | 34/51 [00:06<00:02,  5.86it/s]
 69%|██████▊   | 35/51 [00:06<00:04,  3.55it/s]
 71%|███████   | 36/51 [00:07<00:06,  2.41it/s]
 73%|███████▎  | 37/51 [00:07<00:04,  2.85it/s]
 75%|███████▍  | 38/51 [00:08<00:03,  3.35it/s]
 76%|███████▋  | 39/51 [00:08<00:02,  4.11it/s]
 78%|███████▊  | 40/51 [00:08<00:02,  4.88it/s]
 80%|████████  | 41/51 [00:08<00:02,  3.95it/s]
 82%|████████▏ | 42/51 [00:10<00:07,  1.16it/s]
 86%|████████▋ | 44/51 [00:11<00:03,  2.00it/s]
 90%|█████████ | 46/51 [00:12<00:02,  1.68it/s]
 92%|█████████▏| 47/51 [00:13<00:02,  1.59it/s]
 96%|█████████▌| 49/51 [00:18<00:02,  1.31s/it]
 98%|█████████▊| 50/51 [00:18<00:01,  1.05s/it]
100%|██████████| 51/51 [00:18<00:00,  1.08it/s]
100%|██████████| 51/51 [00:18<00:00,  2.72it/s]
+
  0%|          | 0/51 [00:00<?, ?it/s]
100%|██████████| 51/51 [00:00<00:00, 2067.04it/s]
+Total results for interface_protein_rna: 51
+
  0%|          | 0/51 [00:00<?, ?it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+
  2%|▏         | 1/51 [00:00<00:06,  7.51it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches
+if they should be treated as homologous.
+
 10%|▉         | 5/51 [00:00<00:02, 19.97it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+
 22%|██▏       | 11/51 [00:00<00:01, 32.63it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain B, native chain E1_3: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+
 29%|██▉       | 15/51 [00:00<00:01, 30.08it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 37%|███▋      | 19/51 [00:00<00:01, 30.71it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain C, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain C, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 7 mismatches
+if they should be treated as homologous.
+
 45%|████▌     | 23/51 [00:00<00:00, 30.57it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain D, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+
 53%|█████▎    | 27/51 [00:01<00:01, 22.87it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain F, native chain E2_1: 8 mismatches, Model chain F, native chain E2_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain F, native chain E2_1: 8 mismatches, Model chain F, native chain E2_2: 8 mismatches, Model chain D, native chain E3_1: 9 mismatches, Model chain D, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+
 59%|█████▉    | 30/51 [00:01<00:00, 21.90it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1: 8 mismatches, Model chain E, native chain E2: 6 mismatches, Model chain E, native chain E3: 5 mismatches, Model chain C, native chain E5: 1 mismatches, Model chain E, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain B, native chain E5: 1 mismatches, Model chain D, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain A, native chain E5: 1 mismatches, Model chain D, native chain E5: 1 mismatches
+if they should be treated as homologous.
+
 65%|██████▍   | 33/51 [00:01<00:00, 18.23it/s]
 71%|███████   | 36/51 [00:01<00:00, 17.59it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 9 mismatches, Model chain B, native chain E1_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1: 7 mismatches, Model chain F, native chain E2: 6 mismatches, Model chain F, native chain E3: 5 mismatches, Model chain F, native chain E4_1: 2 mismatches, Model chain F, native chain E4_2: 2 mismatches, Model chain F, native chain E4_3: 2 mismatches, Model chain C, native chain E5: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1: 7 mismatches, Model chain F, native chain E2: 6 mismatches, Model chain F, native chain E3: 5 mismatches, Model chain F, native chain E4_1: 2 mismatches, Model chain F, native chain E4_2: 2 mismatches, Model chain F, native chain E4_3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E3: 9 mismatches, Model chain B, native chain E3: 5 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain B, native chain E4: 3 mismatches
+if they should be treated as homologous.
+
 75%|███████▍  | 38/51 [00:01<00:01, 12.75it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E5: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E4: 7 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+
 80%|████████  | 41/51 [00:02<00:00, 14.83it/s]
 86%|████████▋ | 44/51 [00:02<00:00, 14.28it/s]
 90%|█████████ | 46/51 [00:02<00:00, 13.76it/s]
 94%|█████████▍| 48/51 [00:02<00:00, 11.63it/s]
 98%|█████████▊| 50/51 [00:03<00:00,  7.83it/s]
100%|██████████| 51/51 [00:04<00:00, 11.59it/s]
+Total results for interface_protein_rna: 51
+
  0%|          | 0/311 [00:00<?, ?it/s]
  2%|▏         | 6/311 [00:01<00:50,  5.99it/s]
  2%|▏         | 7/311 [00:01<00:54,  5.57it/s]
  3%|▎         | 10/311 [00:02<01:11,  4.20it/s]
  4%|▍         | 13/311 [00:02<00:47,  6.21it/s]
  6%|▋         | 20/311 [00:02<00:23, 12.21it/s]
  7%|▋         | 23/311 [00:03<00:33,  8.56it/s]
  8%|▊         | 26/311 [00:03<00:27, 10.46it/s]
 10%|▉         | 30/311 [00:03<00:20, 13.64it/s]
 11%|█         | 33/311 [00:03<00:19, 14.02it/s]
 12%|█▏        | 38/311 [00:03<00:20, 13.32it/s]
 13%|█▎        | 40/311 [00:04<00:35,  7.58it/s]
 14%|█▍        | 43/311 [00:04<00:29,  8.97it/s]
 15%|█▍        | 46/311 [00:05<00:27,  9.77it/s]
 15%|█▌        | 48/311 [00:05<00:37,  6.92it/s]
 16%|█▌        | 50/311 [00:05<00:32,  8.13it/s]
 17%|█▋        | 52/311 [00:05<00:27,  9.48it/s]
 18%|█▊        | 55/311 [00:06<00:24, 10.31it/s]
 19%|█▊        | 58/311 [00:06<00:21, 12.04it/s]
 19%|█▉        | 60/311 [00:06<00:24, 10.42it/s]
 20%|█▉        | 62/311 [00:06<00:26,  9.31it/s]
 21%|██        | 64/311 [00:07<00:41,  5.95it/s]
 21%|██        | 66/311 [00:07<00:34,  7.14it/s]
 22%|██▏       | 68/311 [00:07<00:28,  8.46it/s]
 23%|██▎       | 70/311 [00:08<00:32,  7.50it/s]
 23%|██▎       | 73/311 [00:08<00:25,  9.18it/s]
 24%|██▍       | 75/311 [00:08<00:24,  9.49it/s]
 25%|██▍       | 77/311 [00:08<00:29,  7.88it/s]
 25%|██▌       | 79/311 [00:09<00:25,  9.07it/s]
 26%|██▌       | 81/311 [00:09<00:23,  9.83it/s]
 27%|██▋       | 83/311 [00:09<00:26,  8.73it/s]
 27%|██▋       | 85/311 [00:09<00:33,  6.71it/s]
 28%|██▊       | 87/311 [00:10<00:38,  5.80it/s]
 28%|██▊       | 88/311 [00:10<00:38,  5.85it/s]
 29%|██▊       | 89/311 [00:11<00:48,  4.54it/s]
 29%|██▉       | 90/311 [00:11<00:49,  4.42it/s]
 30%|██▉       | 93/311 [00:11<00:32,  6.74it/s]
 31%|███       | 95/311 [00:11<00:27,  7.81it/s]
 31%|███       | 97/311 [00:11<00:23,  9.24it/s]
 32%|███▏      | 99/311 [00:12<00:28,  7.35it/s]
 32%|███▏      | 100/311 [00:12<00:36,  5.83it/s]
 33%|███▎      | 103/311 [00:12<00:33,  6.21it/s]
 34%|███▍      | 106/311 [00:13<00:29,  6.90it/s]
 34%|███▍      | 107/311 [00:13<00:37,  5.42it/s]
 35%|███▌      | 109/311 [00:13<00:35,  5.74it/s]
 35%|███▌      | 110/311 [00:14<00:33,  6.04it/s]
 36%|███▌      | 111/311 [00:14<00:34,  5.82it/s]
 36%|███▌      | 112/311 [00:14<00:33,  5.98it/s]
 37%|███▋      | 115/311 [00:14<00:23,  8.50it/s]
 38%|███▊      | 117/311 [00:14<00:21,  9.04it/s]
 38%|███▊      | 119/311 [00:14<00:18, 10.65it/s]
 40%|███▉      | 123/311 [00:15<00:16, 11.63it/s]
 41%|████      | 127/311 [00:15<00:11, 15.44it/s]
 41%|████▏     | 129/311 [00:15<00:18, 10.01it/s]
 42%|████▏     | 132/311 [00:16<00:15, 11.61it/s]
 43%|████▎     | 134/311 [00:16<00:15, 11.39it/s]
 44%|████▎     | 136/311 [00:16<00:17,  9.88it/s]
 44%|████▍     | 138/311 [00:16<00:20,  8.46it/s]
 45%|████▍     | 139/311 [00:16<00:20,  8.31it/s]
 46%|████▌     | 142/311 [00:17<00:15, 10.63it/s]
 47%|████▋     | 145/311 [00:17<00:12, 13.66it/s]
 47%|████▋     | 147/311 [00:17<00:19,  8.21it/s]
 48%|████▊     | 149/311 [00:18<00:19,  8.18it/s]
 49%|████▊     | 151/311 [00:18<00:24,  6.49it/s]
 50%|████▉     | 155/311 [00:18<00:16,  9.47it/s]
 51%|█████     | 159/311 [00:18<00:12, 12.33it/s]
 52%|█████▏    | 161/311 [00:19<00:13, 11.04it/s]
 52%|█████▏    | 163/311 [00:20<00:31,  4.70it/s]
 53%|█████▎    | 166/311 [00:20<00:22,  6.50it/s]
 57%|█████▋    | 178/311 [00:20<00:10, 12.38it/s]
 58%|█████▊    | 180/311 [00:21<00:15,  8.56it/s]
 59%|█████▊    | 182/311 [00:22<00:17,  7.27it/s]
 59%|█████▉    | 184/311 [00:22<00:16,  7.83it/s]
 60%|█████▉    | 186/311 [00:22<00:18,  6.87it/s]
 60%|██████    | 187/311 [00:22<00:17,  7.14it/s]
 61%|██████    | 189/311 [00:22<00:14,  8.33it/s]
 61%|██████▏   | 191/311 [00:23<00:18,  6.47it/s]
 63%|██████▎   | 195/311 [00:23<00:12,  9.48it/s]
 63%|██████▎   | 197/311 [00:23<00:12,  9.14it/s]
 64%|██████▍   | 199/311 [00:24<00:11,  9.41it/s]
 65%|██████▍   | 201/311 [00:24<00:11,  9.55it/s]
 65%|██████▌   | 203/311 [00:24<00:13,  8.08it/s]
 66%|██████▌   | 204/311 [00:24<00:13,  7.93it/s]
 66%|██████▌   | 206/311 [00:24<00:10,  9.58it/s]
 67%|██████▋   | 209/311 [00:25<00:09, 10.33it/s]
 68%|██████▊   | 211/311 [00:25<00:13,  7.57it/s]
 68%|██████▊   | 212/311 [00:25<00:14,  6.92it/s]
 68%|██████▊   | 213/311 [00:25<00:14,  6.79it/s]
 70%|██████▉   | 217/311 [00:26<00:07, 11.95it/s]
 71%|███████   | 220/311 [00:26<00:07, 11.99it/s]
 72%|███████▏  | 225/311 [00:26<00:04, 17.95it/s]
 73%|███████▎  | 228/311 [00:26<00:04, 19.63it/s]
 74%|███████▍  | 231/311 [00:27<00:11,  7.02it/s]
 75%|███████▌  | 234/311 [00:27<00:08,  8.91it/s]
 77%|███████▋  | 238/311 [00:27<00:06, 12.11it/s]
 77%|███████▋  | 241/311 [00:28<00:05, 12.10it/s]
 79%|███████▉  | 245/311 [00:28<00:04, 13.28it/s]
 79%|███████▉  | 247/311 [00:28<00:05, 12.45it/s]
 80%|████████  | 250/311 [00:28<00:06,  9.92it/s]
 81%|████████  | 252/311 [00:29<00:05, 10.52it/s]
 82%|████████▏ | 254/311 [00:29<00:05, 10.45it/s]
 82%|████████▏ | 256/311 [00:29<00:04, 11.33it/s]
 83%|████████▎ | 259/311 [00:29<00:04, 12.35it/s]
 84%|████████▍ | 262/311 [00:29<00:03, 14.29it/s]
 85%|████████▍ | 264/311 [00:29<00:03, 14.85it/s]
 86%|████████▌ | 266/311 [00:30<00:03, 11.85it/s]
 86%|████████▌ | 268/311 [00:30<00:03, 12.31it/s]
 87%|████████▋ | 270/311 [00:30<00:05,  7.50it/s]
 88%|████████▊ | 275/311 [00:31<00:03, 11.12it/s]
 89%|████████▉ | 278/311 [00:31<00:02, 12.42it/s]
 91%|█████████ | 282/311 [00:31<00:01, 15.92it/s]
 92%|█████████▏| 285/311 [00:31<00:02, 12.57it/s]
 93%|█████████▎| 288/311 [00:31<00:01, 15.04it/s]
 94%|█████████▎| 291/311 [00:32<00:01, 14.42it/s]
 94%|█████████▍| 293/311 [00:32<00:01, 12.05it/s]
 95%|█████████▍| 295/311 [00:32<00:01, 11.86it/s]
 95%|█████████▌| 297/311 [00:32<00:01, 12.45it/s]
 97%|█████████▋| 303/311 [00:32<00:00, 19.68it/s]
 98%|█████████▊| 306/311 [00:33<00:00, 12.57it/s]
 99%|█████████▉| 308/311 [00:34<00:00,  7.15it/s]
100%|█████████▉| 310/311 [00:34<00:00,  7.36it/s]
100%|██████████| 311/311 [00:34<00:00,  8.97it/s]
+
  0%|          | 0/311 [00:00<?, ?it/s]
100%|██████████| 311/311 [00:00<00:00, 18825.10it/s]
+Total results for interface_protein_dna: 311
+
  0%|          | 0/311 [00:00<?, ?it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain B, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
  0%|          | 1/311 [00:00<01:15,  4.10it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain D, native chain E2: 9 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain C, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 5 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain C, native chain E1: 5 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 3 mismatches, Model chain B, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 8 mismatches, Model chain B, native chain E2: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8pw0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 201, in dockq
+    best_result, best_dockq = run_chain_map(best_mapping)
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 301, in calc_DockQ
+    aligned_sample_2, aligned_ref_2 = get_aligned_residues(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 124, in get_aligned_residues
+    rB = next(resB)
+StopIteration
+
+
  4%|▎         | 11/311 [00:00<00:11, 27.10it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 8 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 8 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 3 mismatches, Model chain C, native chain E4: 3 mismatches, Model chain C, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain B, native chain E2: 1 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 6 mismatches
+if they should be treated as homologous.
+
  6%|▋         | 20/311 [00:00<00:08, 35.66it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 6 mismatches
+if they should be treated as homologous.
+
  9%|▉         | 28/311 [00:00<00:06, 45.25it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 9 mismatches, Model chain A, native chain E2_2: 9 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 9 mismatches, Model chain F, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 9 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3_1: 7 mismatches, Model chain B, native chain E3_2: 7 mismatches, Model chain B, native chain E3_3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2_1: 7 mismatches, Model chain C, native chain E2_2: 7 mismatches, Model chain C, native chain E2_3: 7 mismatches
+if they should be treated as homologous.
+
 11%|█         | 34/311 [00:00<00:06, 42.24it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E1_1: 6 mismatches, Model chain C-2, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain C-2, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain C-2, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain C, native chain E1_3: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D-2, native chain E1_1: 3 mismatches, Model chain D-2, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain D-2, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain D-2, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain D, native chain E1_3: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+
 13%|█▎        | 39/311 [00:01<00:07, 38.20it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 4 mismatches, Model chain C, native chain E2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3_1: 8 mismatches, Model chain B, native chain E3_2: 8 mismatches, Model chain B, native chain E3_3: 8 mismatches, Model chain B, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain B, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain D, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 15%|█▌        | 47/311 [00:01<00:05, 45.11it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches
+if they should be treated as homologous.
+
 17%|█▋        | 52/311 [00:01<00:06, 39.78it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain C, native chain E3: 6 mismatches, Model chain C, native chain E4: 6 mismatches, Model chain E, native chain E4: 4 mismatches
+if they should be treated as homologous.
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 8 mismatches, Model chain D, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain D, native chain E2_2: 8 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8sv3-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 621, in run_on_all_native_interfaces
+    native_chains = tuple([native_structure[chain] for chain in chain_pair])
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 621, in <listcomp>
+    native_chains = tuple([native_structure[chain] for chain in chain_pair])
+  File "/opt/foldbench-env/lib/python3.9/site-packages/Bio/PDB/Entity.py", line 65, in __getitem__
+    return self.child_dict[id]
+KeyError: 'D'
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 4 mismatches, Model chain F, native chain E1_2: 4 mismatches, Model chain F, native chain E2_1: 6 mismatches, Model chain F, native chain E2_2: 6 mismatches, Model chain C, native chain E3: 6 mismatches, Model chain F, native chain E3: 4 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches, Model chain A, native chain E3_3: 9 mismatches, Model chain A, native chain E3_4: 9 mismatches, Model chain A, native chain E3_5: 9 mismatches, Model chain A, native chain E3_6: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches, Model chain B, native chain E3_3: 9 mismatches, Model chain B, native chain E3_4: 9 mismatches, Model chain B, native chain E3_5: 9 mismatches, Model chain B, native chain E3_6: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain D, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 8 mismatches, Model chain I, native chain E1_2: 8 mismatches, Model chain I, native chain E1_3: 8 mismatches, Model chain I, native chain E1_4: 8 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain I, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain I, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain I, native chain E2_3: 5 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain I, native chain E2_4: 5 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain I, native chain E1_1: 8 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain I, native chain E1_2: 8 mismatches, Model chain B, native chain E1_3: 2 mismatches, Model chain I, native chain E1_3: 8 mismatches, Model chain B, native chain E1_4: 2 mismatches, Model chain I, native chain E1_4: 8 mismatches, Model chain I, native chain E2_1: 5 mismatches, Model chain I, native chain E2_2: 5 mismatches, Model chain I, native chain E2_3: 5 mismatches, Model chain I, native chain E2_4: 5 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain B, native chain E3_2: 5 mismatches, Model chain B, native chain E3_3: 5 mismatches, Model chain B, native chain E3_4: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain B, native chain E1_3: 6 mismatches, Model chain B, native chain E1_4: 6 mismatches, Model chain B, native chain E1_5: 6 mismatches, Model chain B, native chain E1_6: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E2_3: 6 mismatches, Model chain A, native chain E2_4: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain B, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain B, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain B, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches, Model chain B, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain B, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain B, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 4 mismatches, Model chain B, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 8 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain C, native chain E1_3: 8 mismatches, Model chain C, native chain E1_4: 8 mismatches, Model chain C, native chain E1_5: 8 mismatches, Model chain C, native chain E1_6: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain C, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain C, native chain E2_2: 8 mismatches, Model chain A, native chain E2_3: 6 mismatches, Model chain C, native chain E2_3: 8 mismatches, Model chain A, native chain E2_4: 6 mismatches, Model chain C, native chain E2_4: 8 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain C, native chain E1_3: 4 mismatches, Model chain C, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain C, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain C, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain C, native chain E2_3: 1 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain C, native chain E2_4: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+
 18%|█▊        | 57/311 [00:01<00:09, 28.16it/s]
 22%|██▏       | 68/311 [00:01<00:05, 42.44it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain C, native chain E1: 6 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+
 24%|██▍       | 74/311 [00:01<00:05, 45.16it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 8 mismatches, Model chain I, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 8 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain B, native chain E1_3: 8 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain B, native chain E1_4: 8 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain I, native chain E2_3: 8 mismatches, Model chain I, native chain E2_4: 8 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 6 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain A, native chain E2_3: 8 mismatches, Model chain I, native chain E2_3: 8 mismatches, Model chain A, native chain E2_4: 8 mismatches, Model chain I, native chain E2_4: 8 mismatches, Model chain A, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 6 mismatches, Model chain A, native chain E3_3: 6 mismatches, Model chain A, native chain E3_4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+
 26%|██▌       | 80/311 [00:02<00:05, 39.95it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 9 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain A, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain C, native chain E1: 9 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain C, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8q43-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 305, in calc_DockQ
+    sample_res_distances = get_residue_distances(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 163, in get_residue_distances
+    model_res_distances = residue_distances(
+  File "/opt/foldbench/evaluation/DockQv2/operations_nocy.py", line 29, in residue_distances
+    atom_distances = get_distances_across_chains(atom_coordinates1, atom_coordinates2)
+  File "/opt/foldbench/evaluation/DockQv2/operations_nocy.py", line 6, in get_distances_across_chains
+    distances = ((model_A_atoms[:, None] - model_B_atoms[None, :]) ** 2).sum(-1)
+ValueError: operands could not be broadcast together with shapes (3390,1,3) (1,0) 
+
+
 27%|██▋       | 85/311 [00:02<00:05, 39.29it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain C, native chain E2_1: 6 mismatches, Model chain C, native chain E2_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+
 29%|██▉       | 90/311 [00:02<00:05, 39.56it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 1 mismatches
+if they should be treated as homologous.
+
 31%|███       | 96/311 [00:02<00:04, 43.34it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 5 mismatches, Model chain C, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 5 mismatches, Model chain C, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+
 32%|███▏      | 101/311 [00:02<00:05, 37.91it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyp-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyp-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain C, native chain E1_3: 3 mismatches, Model chain A-2, native chain E2: 3 mismatches, Model chain A-2, native chain E3: 8 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyn-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyn-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyo-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain D, native chain E1_3: 8 mismatches, Model chain A-2, native chain E2: 3 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A-2, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E1_1: 5 mismatches, Model chain C-2, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+
 35%|███▌      | 109/311 [00:02<00:05, 36.66it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain E, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain E, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain E, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain F, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain F, native chain E3: 3 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain F, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 2 mismatches, Model chain D, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain D, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain D, native chain E5: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain D, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain D, native chain E2_2: 8 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain C, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain C, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain C, native chain E5: 2 mismatches
+if they should be treated as homologous.
+
 37%|███▋      | 115/311 [00:03<00:04, 39.23it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 3 mismatches, Model chain A, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E1: 1 mismatches, Model chain C, native chain E1: 9 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 39%|███▊      | 120/311 [00:03<00:06, 28.51it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain C, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain C, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+
 40%|███▉      | 124/311 [00:03<00:06, 30.06it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain D, native chain E2_1: 9 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain D, native chain E2_2: 9 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
 41%|████      | 128/311 [00:03<00:06, 29.90it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain C, native chain E1_3: 1 mismatches, Model chain C, native chain E1_4: 1 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain C, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain C, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain C, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain C, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain B, native chain E1_3: 2 mismatches, Model chain B, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain B, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain B, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches, Model chain B, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches
+if they should be treated as homologous.
+
 43%|████▎     | 133/311 [00:03<00:06, 25.64it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain A, native chain E2_4: 4 mismatches
+if they should be treated as homologous.
+
 44%|████▎     | 136/311 [00:03<00:06, 25.62it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches
+if they should be treated as homologous.
+
 45%|████▍     | 139/311 [00:04<00:06, 24.88it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+
 46%|████▌     | 142/311 [00:04<00:07, 21.74it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E2: 5 mismatches
+if they should be treated as homologous.
+
 47%|████▋     | 147/311 [00:04<00:06, 25.26it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain B, native chain E3: 6 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 2 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain C, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches, Model chain C, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 9 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 3 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain C, native chain E2: 9 mismatches
+if they should be treated as homologous.
+
 49%|████▊     | 151/311 [00:04<00:06, 26.57it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 3 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain B, native chain E3: 6 mismatches, Model chain D, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 5 mismatches, Model chain D, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 50%|████▉     | 155/311 [00:04<00:05, 26.60it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain C, native chain E2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain D, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches, Model chain D, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain F, native chain E3: 2 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain F, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 9 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain C, native chain E1_4: 9 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain C, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain C, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+
 51%|█████     | 158/311 [00:04<00:06, 25.32it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 1 mismatches, Model chain E, native chain E1_2: 1 mismatches, Model chain E, native chain E2: 1 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain E, native chain E3: 1 mismatches, Model chain B, native chain E4: 1 mismatches, Model chain B, native chain E5: 2 mismatches, Model chain E, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 5 mismatches, Model chain D, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain D, native chain E1_3: 6 mismatches, Model chain D, native chain E1_4: 6 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain D, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain D, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+
 52%|█████▏    | 163/311 [00:04<00:05, 28.72it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 5 mismatches, Model chain E, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain E, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain E, native chain E1_2: 5 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain B, native chain E3_1: 6 mismatches, Model chain B, native chain E3_2: 6 mismatches
+if they should be treated as homologous.
+
 55%|█████▍    | 170/311 [00:05<00:03, 37.85it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 7 mismatches, Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain B, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+
 56%|█████▋    | 175/311 [00:05<00:03, 34.31it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain B, native chain E3: 9 mismatches
+if they should be treated as homologous.
+
 59%|█████▉    | 183/311 [00:05<00:02, 43.96it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches
+if they should be treated as homologous.
+
 61%|██████    | 190/311 [00:05<00:02, 49.71it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain C, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain C, native chain E3_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain D, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain D, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain C, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain D, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 63%|██████▎   | 196/311 [00:05<00:02, 42.07it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain D, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E1_3: 4 mismatches, Model chain E, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain E, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain E, native chain E3_2: 6 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain E, native chain E3_3: 6 mismatches, Model chain A, native chain E3_4: 2 mismatches, Model chain E, native chain E3_4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain C, native chain E1_1: 9 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain B, native chain E1_3: 3 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain B, native chain E1_4: 3 mismatches, Model chain C, native chain E1_4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E1_3: 4 mismatches, Model chain E, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain E, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain E, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain E, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 2 mismatches, Model chain E, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
 65%|██████▍   | 201/311 [00:05<00:02, 38.02it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain F, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain F, native chain E2_2: 4 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain F, native chain E2_3: 4 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain F, native chain E2_4: 4 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain A, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 9 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain C, native chain E1_4: 9 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches, Model chain A, native chain E3_3: 9 mismatches, Model chain A, native chain E3_4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain F, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain F, native chain E2_2: 6 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain F, native chain E2_3: 6 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain F, native chain E2_4: 6 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain A, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 4 mismatches, Model chain C, native chain E5: 4 mismatches
+if they should be treated as homologous.
+
 66%|██████▌   | 206/311 [00:05<00:02, 38.05it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 7 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain D, native chain E3: 4 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain D, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain D, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain E, native chain E3: 4 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain E, native chain E4: 4 mismatches, Model chain E, native chain E6: 1 mismatches
+if they should be treated as homologous.
+
 68%|██████▊   | 211/311 [00:06<00:02, 36.20it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain D, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 3 mismatches, Model chain E, native chain E1_2: 3 mismatches, Model chain E, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches
+if they should be treated as homologous.
+
 70%|███████   | 218/311 [00:06<00:02, 40.32it/s]
 72%|███████▏  | 223/311 [00:06<00:02, 42.12it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain C, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain C, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain F, native chain E1_5: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain F, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain F, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain F, native chain E2_3: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain F, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain F, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain F, native chain E3_3: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8rpx-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 301, in calc_DockQ
+    aligned_sample_2, aligned_ref_2 = get_aligned_residues(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 124, in get_aligned_residues
+    rB = next(resB)
+StopIteration
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 8 mismatches, Model chain C, native chain E2: 7 mismatches
+if they should be treated as homologous.
+
 73%|███████▎  | 228/311 [00:06<00:02, 35.56it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 4 mismatches, Model chain G, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain G, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain G, native chain E2_3: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 2 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 3 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 75%|███████▍  | 233/311 [00:06<00:02, 37.78it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 9 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 77%|███████▋  | 239/311 [00:06<00:01, 42.71it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 9 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain F, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain F, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 3 mismatches, Model chain A, native chain E3_3: 3 mismatches, Model chain A, native chain E3_4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 3 mismatches, Model chain E, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain E, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain E, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+
 78%|███████▊  | 244/311 [00:06<00:01, 39.81it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain F, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2_1: 1 mismatches, Model chain F, native chain E2_2: 1 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain B, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain F, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2_1: 3 mismatches, Model chain F, native chain E2_2: 3 mismatches, Model chain B, native chain E3_1: 2 mismatches, Model chain B, native chain E3_2: 2 mismatches, Model chain B, native chain E3_3: 2 mismatches, Model chain B, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 1 mismatches, Model chain D, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+
 81%|████████  | 251/311 [00:07<00:01, 42.27it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E1: 1 mismatches, Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain C, native chain E1_3: 1 mismatches, Model chain C, native chain E1_4: 1 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain C, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain C, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 1 mismatches, Model chain C, native chain E2_3: 5 mismatches, Model chain A, native chain E2_4: 1 mismatches, Model chain C, native chain E2_4: 5 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain C, native chain E1: 8 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+
 83%|████████▎ | 258/311 [00:07<00:01, 48.36it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain B, native chain E1_3: 3 mismatches, Model chain B, native chain E1_4: 3 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 1 mismatches, Model chain A, native chain E2_4: 1 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain B, native chain E3_2: 5 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain B, native chain E3_3: 5 mismatches, Model chain A, native chain E3_4: 1 mismatches, Model chain B, native chain E3_4: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 1 mismatches, Model chain E, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain E, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 3 mismatches, Model chain E, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain C, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 8 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain C, native chain E1_1: 8 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain C, native chain E1_3: 8 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain C, native chain E1_4: 8 mismatches, Model chain C, native chain E2_1: 4 mismatches, Model chain C, native chain E2_2: 4 mismatches, Model chain C, native chain E2_3: 4 mismatches, Model chain C, native chain E2_4: 4 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+
 85%|████████▍ | 264/311 [00:07<00:01, 40.35it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 4 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain D, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain D, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 8 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 9 mismatches, Model chain D, native chain E1_2: 9 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 9 mismatches
+if they should be treated as homologous.
+
 88%|████████▊ | 274/311 [00:07<00:00, 47.87it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain C, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain C, native chain E1_3: 2 mismatches, Model chain C, native chain E1_4: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain D, native chain E1_3: 4 mismatches, Model chain D, native chain E1_4: 4 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain H, native chain E2_1: 8 mismatches, Model chain H, native chain E2_2: 8 mismatches, Model chain H, native chain E3: 7 mismatches, Model chain H, native chain E5: 8 mismatches, Model chain H, native chain E6: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E3_1: 4 mismatches, Model chain I, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+
 91%|█████████▏| 284/311 [00:07<00:00, 58.92it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain J, native chain E2_1: 4 mismatches, Model chain J, native chain E2_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain J, native chain E1_1: 9 mismatches, Model chain J, native chain E1_2: 9 mismatches, Model chain J, native chain E1_3: 9 mismatches, Model chain J, native chain E1_4: 9 mismatches, Model chain J, native chain E2_1: 8 mismatches, Model chain J, native chain E2_2: 8 mismatches, Model chain J, native chain E3: 5 mismatches, Model chain J, native chain E4: 9 mismatches, Model chain J, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain C, native chain E1_3: 7 mismatches, Model chain C, native chain E1_4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain G, native chain E1_1: 7 mismatches, Model chain G, native chain E1_2: 7 mismatches, Model chain G, native chain E1_3: 7 mismatches, Model chain G, native chain E1_4: 7 mismatches, Model chain G, native chain E2_1: 6 mismatches, Model chain G, native chain E2_2: 6 mismatches, Model chain G, native chain E4: 8 mismatches, Model chain G, native chain E5: 5 mismatches, Model chain G, native chain E6: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 6 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain I, native chain E3: 7 mismatches, Model chain I, native chain E4: 5 mismatches, Model chain I, native chain E6: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B-2, native chain E3_1: 2 mismatches, Model chain B-2, native chain E3_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E2_1: 2 mismatches, Model chain C-2, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+
 94%|█████████▎| 291/311 [00:07<00:00, 42.77it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8cs0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8cs0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+
 97%|█████████▋| 301/311 [00:08<00:00, 51.83it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 99%|█████████▉| 308/311 [00:08<00:00, 44.63it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 9 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain A, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 3 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain A, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
100%|██████████| 311/311 [00:09<00:00, 34.14it/s]
+Total results for interface_protein_dna: 300
+
  0%|          | 0/531 [00:00<?, ?it/s]
  0%|          | 1/531 [00:02<19:27,  2.20s/it]
  1%|          | 3/531 [00:02<05:24,  1.63it/s]
  1%|          | 5/531 [00:02<02:56,  2.98it/s]
  2%|▏         | 9/531 [00:02<01:20,  6.46it/s]
  2%|▏         | 11/531 [00:02<01:04,  8.04it/s]
  3%|▎         | 17/531 [00:02<00:35, 14.46it/s]
  4%|▍         | 20/531 [00:03<00:45, 11.14it/s]
  5%|▍         | 24/531 [00:03<00:41, 12.13it/s]
  5%|▍         | 26/531 [00:03<00:39, 12.82it/s]
  5%|▌         | 29/531 [00:03<00:33, 14.87it/s]
  6%|▌         | 31/531 [00:04<00:43, 11.37it/s]
  6%|▋         | 34/531 [00:04<00:42, 11.66it/s]
  7%|▋         | 36/531 [00:04<00:53,  9.32it/s]
  7%|▋         | 38/531 [00:04<00:46, 10.51it/s]
  8%|▊         | 40/531 [00:05<00:50,  9.66it/s]
  8%|▊         | 42/531 [00:05<00:47, 10.22it/s]
  8%|▊         | 44/531 [00:05<00:42, 11.41it/s]
  9%|▊         | 46/531 [00:05<00:43, 11.15it/s]
  9%|▉         | 49/531 [00:05<00:40, 11.97it/s]
 10%|▉         | 52/531 [00:06<00:40, 11.70it/s]
 10%|█         | 54/531 [00:06<00:43, 10.97it/s]
 11%|█         | 56/531 [00:06<00:45, 10.34it/s]
 11%|█         | 58/531 [00:06<00:47, 10.04it/s]
 11%|█▏        | 60/531 [00:07<01:00,  7.76it/s]
 12%|█▏        | 62/531 [00:07<00:51,  9.14it/s]
 12%|█▏        | 64/531 [00:07<00:43, 10.84it/s]
 12%|█▏        | 66/531 [00:07<00:40, 11.59it/s]
 13%|█▎        | 69/531 [00:07<00:30, 15.07it/s]
 14%|█▎        | 73/531 [00:07<00:23, 19.70it/s]
 14%|█▍        | 76/531 [00:07<00:22, 20.12it/s]
 15%|█▍        | 79/531 [00:08<00:36, 12.41it/s]
 15%|█▌        | 81/531 [00:08<00:33, 13.52it/s]
 16%|█▌        | 83/531 [00:09<01:08,  6.58it/s]
 16%|█▌        | 85/531 [00:09<00:57,  7.75it/s]
 17%|█▋        | 89/531 [00:09<00:41, 10.56it/s]
 18%|█▊        | 96/531 [00:09<00:25, 17.08it/s]
 19%|█▊        | 99/531 [00:09<00:25, 17.18it/s]
 19%|█▉        | 102/531 [00:10<00:35, 12.14it/s]
 20%|█▉        | 104/531 [00:10<00:34, 12.55it/s]
 20%|█▉        | 106/531 [00:10<00:35, 12.01it/s]
 20%|██        | 108/531 [00:10<00:39, 10.59it/s]
 21%|██        | 110/531 [00:11<00:48,  8.74it/s]
 21%|██        | 112/531 [00:11<00:47,  8.90it/s]
 22%|██▏       | 115/531 [00:11<00:40, 10.19it/s]
 22%|██▏       | 117/531 [00:11<00:40, 10.31it/s]
 22%|██▏       | 119/531 [00:12<00:37, 10.88it/s]
 23%|██▎       | 121/531 [00:12<00:42,  9.59it/s]
 24%|██▎       | 125/531 [00:12<00:42,  9.63it/s]
 24%|██▍       | 127/531 [00:13<00:47,  8.59it/s]
 24%|██▍       | 128/531 [00:13<00:49,  8.12it/s]
 24%|██▍       | 130/531 [00:13<00:41,  9.61it/s]
 25%|██▍       | 132/531 [00:13<00:36, 10.95it/s]
 26%|██▌       | 136/531 [00:13<00:27, 14.34it/s]
 26%|██▌       | 138/531 [00:13<00:30, 13.01it/s]
 26%|██▋       | 140/531 [00:13<00:31, 12.44it/s]
 27%|██▋       | 142/531 [00:14<00:35, 11.09it/s]
 27%|██▋       | 144/531 [00:14<00:37, 10.20it/s]
 27%|██▋       | 146/531 [00:14<00:35, 10.92it/s]
 28%|██▊       | 148/531 [00:14<00:34, 11.13it/s]
 28%|██▊       | 150/531 [00:14<00:35, 10.77it/s]
 29%|██▉       | 153/531 [00:15<00:30, 12.45it/s]
 29%|██▉       | 156/531 [00:15<00:33, 11.10it/s]
 30%|██▉       | 158/531 [00:15<00:35, 10.63it/s]
 30%|███       | 160/531 [00:15<00:33, 11.01it/s]
 31%|███       | 162/531 [00:16<00:43,  8.53it/s]
 31%|███       | 163/531 [00:16<00:43,  8.42it/s]
 31%|███▏      | 167/531 [00:16<00:27, 13.44it/s]
 32%|███▏      | 170/531 [00:16<00:23, 15.70it/s]
 32%|███▏      | 172/531 [00:16<00:30, 11.83it/s]
 33%|███▎      | 174/531 [00:16<00:27, 12.99it/s]
 33%|███▎      | 176/531 [00:17<00:36,  9.71it/s]
 34%|███▎      | 178/531 [00:17<00:37,  9.31it/s]
 34%|███▍      | 181/531 [00:17<00:30, 11.66it/s]
 34%|███▍      | 183/531 [00:18<00:40,  8.69it/s]
 35%|███▌      | 186/531 [00:18<00:31, 10.80it/s]
 35%|███▌      | 188/531 [00:18<00:29, 11.53it/s]
 36%|███▌      | 190/531 [00:18<00:31, 10.94it/s]
 37%|███▋      | 194/531 [00:18<00:21, 15.46it/s]
 37%|███▋      | 196/531 [00:18<00:24, 13.54it/s]
 37%|███▋      | 198/531 [00:19<00:33,  9.91it/s]
 38%|███▊      | 200/531 [00:19<00:32, 10.31it/s]
 38%|███▊      | 202/531 [00:19<00:32, 10.25it/s]
 38%|███▊      | 204/531 [00:19<00:34,  9.35it/s]
 39%|███▉      | 208/531 [00:20<00:28, 11.47it/s]
 40%|███▉      | 210/531 [00:20<00:29, 10.94it/s]
 40%|███▉      | 212/531 [00:20<00:27, 11.65it/s]
 40%|████      | 214/531 [00:20<00:24, 12.83it/s]
 41%|████      | 216/531 [00:20<00:23, 13.27it/s]
 41%|████▏     | 220/531 [00:21<00:27, 11.32it/s]
 42%|████▏     | 224/531 [00:21<00:20, 14.78it/s]
 43%|████▎     | 226/531 [00:21<00:24, 12.33it/s]
 43%|████▎     | 228/531 [00:21<00:28, 10.64it/s]
 44%|████▍     | 234/531 [00:21<00:16, 17.91it/s]
 45%|████▍     | 237/531 [00:22<00:27, 10.63it/s]
 45%|████▌     | 239/531 [00:22<00:28, 10.33it/s]
 46%|████▌     | 242/531 [00:23<00:30,  9.48it/s]
 46%|████▌     | 244/531 [00:23<00:26, 10.66it/s]
 46%|████▋     | 246/531 [00:23<00:23, 11.92it/s]
 47%|████▋     | 248/531 [00:23<00:23, 12.30it/s]
 47%|████▋     | 251/531 [00:23<00:18, 15.15it/s]
 48%|████▊     | 253/531 [00:24<00:31,  8.95it/s]
 48%|████▊     | 255/531 [00:24<00:30,  8.95it/s]
 48%|████▊     | 257/531 [00:24<00:26, 10.16it/s]
 49%|████▉     | 261/531 [00:24<00:24, 11.22it/s]
 50%|████▉     | 263/531 [00:24<00:22, 12.11it/s]
 50%|████▉     | 265/531 [00:25<00:24, 10.98it/s]
 50%|█████     | 267/531 [00:25<00:25, 10.23it/s]
 51%|█████     | 270/531 [00:25<00:23, 11.14it/s]
 51%|█████     | 272/531 [00:25<00:23, 11.14it/s]
 52%|█████▏    | 274/531 [00:26<00:29,  8.61it/s]
 52%|█████▏    | 278/531 [00:26<00:20, 12.20it/s]
 53%|█████▎    | 280/531 [00:26<00:20, 12.30it/s]
 53%|█████▎    | 282/531 [00:26<00:30,  8.17it/s]
 53%|█████▎    | 284/531 [00:27<00:29,  8.37it/s]
 54%|█████▍    | 286/531 [00:27<00:26,  9.17it/s]
 54%|█████▍    | 289/531 [00:27<00:20, 11.61it/s]
 55%|█████▍    | 291/531 [00:27<00:22, 10.59it/s]
 55%|█████▌    | 293/531 [00:27<00:19, 12.03it/s]
 56%|█████▌    | 295/531 [00:27<00:17, 13.34it/s]
 56%|█████▌    | 297/531 [00:28<00:19, 11.96it/s]
 57%|█████▋    | 302/531 [00:28<00:17, 12.73it/s]
 57%|█████▋    | 304/531 [00:28<00:24,  9.25it/s]
 58%|█████▊    | 306/531 [00:29<00:21, 10.34it/s]
 58%|█████▊    | 308/531 [00:29<00:24,  9.17it/s]
 59%|█████▊    | 311/531 [00:29<00:20, 10.63it/s]
 59%|█████▉    | 313/531 [00:29<00:19, 11.47it/s]
 59%|█████▉    | 315/531 [00:29<00:17, 12.49it/s]
 60%|█████▉    | 317/531 [00:29<00:15, 13.90it/s]
 60%|██████    | 320/531 [00:30<00:15, 13.38it/s]
 61%|██████    | 323/531 [00:30<00:13, 15.22it/s]
 61%|██████    | 325/531 [00:30<00:17, 12.09it/s]
 62%|██████▏   | 327/531 [00:30<00:21,  9.46it/s]
 62%|██████▏   | 329/531 [00:31<00:30,  6.73it/s]
 63%|██████▎   | 332/531 [00:31<00:22,  8.87it/s]
 63%|██████▎   | 334/531 [00:31<00:19, 10.12it/s]
 63%|██████▎   | 336/531 [00:31<00:18, 10.40it/s]
 64%|██████▎   | 338/531 [00:32<00:20,  9.47it/s]
 64%|██████▍   | 340/531 [00:32<00:17, 10.85it/s]
 64%|██████▍   | 342/531 [00:32<00:16, 11.55it/s]
 65%|██████▍   | 344/531 [00:32<00:16, 11.66it/s]
 65%|██████▌   | 346/531 [00:33<00:27,  6.76it/s]
 66%|██████▌   | 350/531 [00:33<00:22,  8.22it/s]
 66%|██████▋   | 353/531 [00:33<00:19,  9.16it/s]
 67%|██████▋   | 356/531 [00:33<00:16, 10.61it/s]
 68%|██████▊   | 359/531 [00:34<00:14, 11.84it/s]
 68%|██████▊   | 361/531 [00:34<00:17,  9.86it/s]
 68%|██████▊   | 363/531 [00:34<00:15, 10.85it/s]
 69%|██████▊   | 365/531 [00:35<00:26,  6.28it/s]
 69%|██████▉   | 367/531 [00:35<00:21,  7.65it/s]
 69%|██████▉   | 369/531 [00:35<00:20,  8.08it/s]
 70%|██████▉   | 371/531 [00:35<00:18,  8.88it/s]
 70%|███████   | 373/531 [00:35<00:15,  9.97it/s]
 71%|███████   | 375/531 [00:36<00:13, 11.17it/s]
 71%|███████   | 377/531 [00:36<00:18,  8.53it/s]
 72%|███████▏  | 380/531 [00:36<00:14, 10.23it/s]
 72%|███████▏  | 382/531 [00:36<00:14, 10.03it/s]
 72%|███████▏  | 384/531 [00:37<00:16,  8.66it/s]
 73%|███████▎  | 386/531 [00:37<00:14,  9.78it/s]
 73%|███████▎  | 388/531 [00:37<00:13, 10.74it/s]
 73%|███████▎  | 390/531 [00:37<00:15,  9.35it/s]
 74%|███████▍  | 392/531 [00:37<00:14,  9.68it/s]
 74%|███████▍  | 395/531 [00:38<00:14,  9.68it/s]
 75%|███████▍  | 397/531 [00:38<00:13,  9.94it/s]
 75%|███████▌  | 399/531 [00:38<00:14,  8.80it/s]
 76%|███████▌  | 401/531 [00:38<00:13,  9.68it/s]
 76%|███████▋  | 405/531 [00:39<00:13,  9.66it/s]
 77%|███████▋  | 407/531 [00:39<00:12, 10.17it/s]
 77%|███████▋  | 410/531 [00:39<00:13,  9.30it/s]
 77%|███████▋  | 411/531 [00:39<00:12,  9.29it/s]
 78%|███████▊  | 414/531 [00:40<00:15,  7.62it/s]
 79%|███████▊  | 417/531 [00:40<00:11, 10.01it/s]
 79%|███████▉  | 419/531 [00:40<00:12,  9.22it/s]
 80%|███████▉  | 423/531 [00:40<00:08, 12.44it/s]
 80%|████████  | 425/531 [00:41<00:08, 12.47it/s]
 81%|████████  | 429/531 [00:41<00:08, 11.84it/s]
 81%|████████  | 431/531 [00:41<00:07, 12.66it/s]
 82%|████████▏ | 433/531 [00:41<00:07, 13.00it/s]
 82%|████████▏ | 435/531 [00:42<00:10,  9.45it/s]
 82%|████████▏ | 437/531 [00:42<00:10,  9.27it/s]
 83%|████████▎ | 440/531 [00:42<00:10,  9.07it/s]
 83%|████████▎ | 442/531 [00:43<00:11,  7.84it/s]
 84%|████████▎ | 444/531 [00:43<00:09,  8.92it/s]
 84%|████████▍ | 446/531 [00:43<00:09,  9.09it/s]
 85%|████████▍ | 449/531 [00:43<00:07, 11.32it/s]
 85%|████████▍ | 451/531 [00:43<00:08,  9.49it/s]
 86%|████████▌ | 456/531 [00:44<00:04, 15.03it/s]
 86%|████████▋ | 458/531 [00:44<00:05, 14.18it/s]
 87%|████████▋ | 460/531 [00:44<00:07,  9.68it/s]
 87%|████████▋ | 462/531 [00:45<00:12,  5.63it/s]
 87%|████████▋ | 464/531 [00:45<00:10,  6.32it/s]
 88%|████████▊ | 468/531 [00:45<00:06,  9.46it/s]
 89%|████████▊ | 470/531 [00:45<00:05, 10.57it/s]
 89%|████████▉ | 472/531 [00:46<00:05, 11.27it/s]
 90%|████████▉ | 476/531 [00:46<00:04, 13.15it/s]
 90%|█████████ | 478/531 [00:46<00:05, 10.60it/s]
 90%|█████████ | 480/531 [00:46<00:05,  9.99it/s]
 91%|█████████▏| 485/531 [00:46<00:02, 15.71it/s]
 92%|█████████▏| 488/531 [00:47<00:02, 17.05it/s]
 92%|█████████▏| 491/531 [00:47<00:03, 10.78it/s]
 93%|█████████▎| 494/531 [00:47<00:02, 12.96it/s]
 93%|█████████▎| 496/531 [00:47<00:02, 13.06it/s]
 94%|█████████▍| 498/531 [00:47<00:02, 13.58it/s]
 94%|█████████▍| 500/531 [00:48<00:02, 11.10it/s]
 95%|█████████▍| 502/531 [00:48<00:03,  9.02it/s]
 95%|█████████▍| 504/531 [00:48<00:03,  8.55it/s]
 95%|█████████▌| 506/531 [00:49<00:04,  5.82it/s]
 95%|█████████▌| 507/531 [00:50<00:07,  3.40it/s]
 96%|█████████▌| 508/531 [00:51<00:09,  2.36it/s]
 96%|█████████▌| 509/531 [00:52<00:12,  1.82it/s]
 96%|█████████▌| 511/531 [00:52<00:07,  2.55it/s]
 96%|█████████▋| 512/531 [00:52<00:06,  2.77it/s]
 97%|█████████▋| 513/531 [00:53<00:05,  3.05it/s]
 97%|█████████▋| 514/531 [00:54<00:08,  2.03it/s]
 97%|█████████▋| 515/531 [00:56<00:17,  1.09s/it]
 97%|█████████▋| 517/531 [00:57<00:10,  1.37it/s]
 98%|█████████▊| 518/531 [00:57<00:08,  1.58it/s]
 98%|█████████▊| 519/531 [00:59<00:10,  1.10it/s]
 98%|█████████▊| 520/531 [00:59<00:08,  1.29it/s]
 98%|█████████▊| 521/531 [01:01<00:10,  1.01s/it]
 98%|█████████▊| 522/531 [01:02<00:09,  1.09s/it]
 98%|█████████▊| 523/531 [01:03<00:06,  1.15it/s]
 99%|█████████▊| 524/531 [01:03<00:05,  1.25it/s]
 99%|█████████▉| 525/531 [01:04<00:05,  1.04it/s]
 99%|█████████▉| 526/531 [01:05<00:04,  1.23it/s]
 99%|█████████▉| 527/531 [01:23<00:23,  5.83s/it]
 99%|█████████▉| 528/531 [01:25<00:13,  4.66s/it]
100%|█████████▉| 529/531 [01:37<00:14,  7.05s/it]
100%|█████████▉| 530/531 [01:43<00:06,  6.59s/it]
100%|██████████| 531/531 [01:48<00:00,  6.29s/it]
100%|██████████| 531/531 [01:48<00:00,  4.88it/s]
+
  0%|          | 0/531 [00:00<?, ?it/s]
100%|██████████| 531/531 [00:00<00:00, 12411.47it/s]
+Total results for interface_protein_ligand: 531
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/logs/inference/verifier.log b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/logs/inference/verifier.log
new file mode 100644
index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/report.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/report.json
new file mode 100644
index 0000000000000000000000000000000000000000..e38aed036deeafc38bb982252534ffc769ec9787
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/report.json
@@ -0,0 +1,69 @@
+{
+  "accepted_predictions": 1424,
+  "benchmark_visible_during_development": true,
+  "evaluation_mode": "model_replay",
+  "expected_predictions": 1448,
+  "invalid_predictions": [],
+  "label_isolated_sandbox": false,
+  "missing_or_invalid_predictions": 24,
+  "requests": 1448,
+  "reward": 0.04600966332016402,
+  "reward_definition": "unweighted mean of the per-track scores in reward.json",
+  "suite_manifest_sha256": "15ca32c737d8548f62cc7e6a237151ae6c15a079b6910e674c279f6d15bb6104",
+  "tracks": {
+    "interface_antibody_antigen": {
+      "finite_targets": 147,
+      "missing_or_invalid": 8,
+      "score": 0.0,
+      "targets": 155
+    },
+    "interface_protein_dna": {
+      "finite_targets": 300,
+      "missing_or_invalid": 11,
+      "score": 0.006430868167202572,
+      "targets": 311
+    },
+    "interface_protein_ligand": {
+      "finite_targets": 484,
+      "missing_or_invalid": 64,
+      "score": 0.0,
+      "targets": 548
+    },
+    "interface_protein_peptide": {
+      "finite_targets": 34,
+      "missing_or_invalid": 7,
+      "score": 0.024390243902439025,
+      "targets": 41
+    },
+    "interface_protein_protein": {
+      "finite_targets": 236,
+      "missing_or_invalid": 25,
+      "score": 0.011494252873563218,
+      "targets": 261
+    },
+    "interface_protein_rna": {
+      "finite_targets": 51,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 51
+    },
+    "monomer_dna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.03233333333333333,
+      "targets": 12
+    },
+    "monomer_protein": {
+      "finite_targets": 322,
+      "missing_or_invalid": 2,
+      "score": 0.3278549382716047,
+      "targets": 324
+    },
+    "monomer_rna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.011583333333333334,
+      "targets": 12
+    }
+  }
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/reward.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/reward.json
new file mode 100644
index 0000000000000000000000000000000000000000..1b2dd41a618cf6e008ddafe633d60b819576156a
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/reward.json
@@ -0,0 +1,12 @@
+{
+  "interface_antibody_antigen": 0.0,
+  "interface_protein_dna": 0.006430868167202572,
+  "interface_protein_ligand": 0.0,
+  "interface_protein_peptide": 0.024390243902439025,
+  "interface_protein_protein": 0.011494252873563218,
+  "interface_protein_rna": 0.0,
+  "monomer_dna": 0.03233333333333333,
+  "monomer_protein": 0.3278549382716047,
+  "monomer_rna": 0.011583333333333334,
+  "reward": 0.04600966332016402
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/report.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/report.json
new file mode 100644
index 0000000000000000000000000000000000000000..49bde1fe193f9b6b755c647e060c5e7b0e33dc29
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/report.json
@@ -0,0 +1,69 @@
+{
+  "accepted_predictions": 1424,
+  "benchmark_visible_during_development": true,
+  "evaluation_mode": "model_replay",
+  "expected_predictions": 1448,
+  "invalid_predictions": [],
+  "label_isolated_sandbox": false,
+  "missing_or_invalid_predictions": 24,
+  "requests": 1448,
+  "reward": 0.07645278939104297,
+  "reward_definition": "unweighted mean of the per-track scores in reward.json",
+  "suite_manifest_sha256": "15ca32c737d8548f62cc7e6a237151ae6c15a079b6910e674c279f6d15bb6104",
+  "tracks": {
+    "interface_antibody_antigen": {
+      "finite_targets": 147,
+      "missing_or_invalid": 8,
+      "score": 0.0,
+      "targets": 155
+    },
+    "interface_protein_dna": {
+      "finite_targets": 300,
+      "missing_or_invalid": 11,
+      "score": 0.003215434083601286,
+      "targets": 311
+    },
+    "interface_protein_ligand": {
+      "finite_targets": 483,
+      "missing_or_invalid": 65,
+      "score": 0.0,
+      "targets": 548
+    },
+    "interface_protein_peptide": {
+      "finite_targets": 35,
+      "missing_or_invalid": 6,
+      "score": 0.04878048780487805,
+      "targets": 41
+    },
+    "interface_protein_protein": {
+      "finite_targets": 234,
+      "missing_or_invalid": 27,
+      "score": 0.02681992337164751,
+      "targets": 261
+    },
+    "interface_protein_rna": {
+      "finite_targets": 51,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 51
+    },
+    "monomer_dna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.08908333333333335,
+      "targets": 12
+    },
+    "monomer_protein": {
+      "finite_targets": 322,
+      "missing_or_invalid": 2,
+      "score": 0.40309259259259306,
+      "targets": 324
+    },
+    "monomer_rna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.11708333333333333,
+      "targets": 12
+    }
+  }
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/reward.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/reward.json
new file mode 100644
index 0000000000000000000000000000000000000000..aab52ee60318e12457029920268218fafadd4507
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/reward.json
@@ -0,0 +1,12 @@
+{
+  "interface_antibody_antigen": 0.0,
+  "interface_protein_dna": 0.003215434083601286,
+  "interface_protein_ligand": 0.0,
+  "interface_protein_peptide": 0.04878048780487805,
+  "interface_protein_protein": 0.02681992337164751,
+  "interface_protein_rna": 0.0,
+  "monomer_dna": 0.08908333333333335,
+  "monomer_protein": 0.40309259259259306,
+  "monomer_rna": 0.11708333333333333,
+  "reward": 0.07645278939104297
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/logs/inference/results/scoring.log b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/logs/inference/results/scoring.log
new file mode 100644
index 0000000000000000000000000000000000000000..09f3e3f1b125fd326e00b3c3d640e813bc9e79b0
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/logs/inference/results/scoring.log
@@ -0,0 +1,1148 @@
+WARNING:root:Invoking DockQ as script rather than binary. This will slow down computations.
+
  0%|          | 0/322 [00:00<?, ?it/s]
  0%|          | 1/322 [00:02<11:22,  2.13s/it]
  1%|          | 2/322 [00:02<05:02,  1.06it/s]
  2%|▏         | 6/322 [00:02<01:16,  4.14it/s]
  3%|▎         | 11/322 [00:02<00:39,  7.84it/s]
  4%|▍         | 13/322 [00:02<00:36,  8.40it/s]
  5%|▍         | 15/322 [00:02<00:32,  9.47it/s]
  6%|▌         | 18/322 [00:03<00:32,  9.45it/s]
  6%|▌         | 20/322 [00:03<00:28, 10.65it/s]
  7%|▋         | 22/322 [00:03<00:25, 11.84it/s]
  8%|▊         | 25/322 [00:03<00:21, 13.52it/s]
  8%|▊         | 27/322 [00:03<00:20, 14.75it/s]
  9%|▉         | 29/322 [00:03<00:19, 15.42it/s]
 10%|▉         | 31/322 [00:04<00:22, 12.88it/s]
 10%|█         | 33/322 [00:04<00:24, 12.00it/s]
 11%|█         | 36/322 [00:04<00:19, 14.51it/s]
 12%|█▏        | 38/322 [00:04<00:20, 14.15it/s]
 12%|█▏        | 40/322 [00:04<00:21, 13.19it/s]
 13%|█▎        | 43/322 [00:04<00:20, 13.57it/s]
 14%|█▍        | 45/322 [00:05<00:25, 10.66it/s]
 15%|█▍        | 47/322 [00:05<00:23, 11.89it/s]
 15%|█▌        | 49/322 [00:05<00:22, 12.24it/s]
 16%|█▌        | 51/322 [00:05<00:20, 13.06it/s]
 16%|█▋        | 53/322 [00:05<00:22, 11.95it/s]
 17%|█▋        | 55/322 [00:06<00:25, 10.29it/s]
 19%|█▊        | 60/322 [00:06<00:15, 16.54it/s]
 19%|█▉        | 62/322 [00:06<00:16, 15.51it/s]
 20%|██        | 66/322 [00:06<00:15, 16.27it/s]
 21%|██        | 68/322 [00:06<00:15, 16.74it/s]
 22%|██▏       | 70/322 [00:06<00:15, 16.22it/s]
 23%|██▎       | 73/322 [00:06<00:13, 18.08it/s]
 24%|██▎       | 76/322 [00:07<00:12, 19.68it/s]
 25%|██▍       | 79/322 [00:07<00:24, 10.11it/s]
 25%|██▌       | 81/322 [00:07<00:22, 10.81it/s]
 27%|██▋       | 86/322 [00:08<00:15, 15.32it/s]
 27%|██▋       | 88/322 [00:08<00:14, 15.78it/s]
 28%|██▊       | 91/322 [00:08<00:12, 18.09it/s]
 29%|██▉       | 94/322 [00:08<00:15, 14.31it/s]
 30%|██▉       | 96/322 [00:08<00:20, 11.03it/s]
 31%|███       | 100/322 [00:09<00:14, 14.94it/s]
 32%|███▏      | 103/322 [00:09<00:20, 10.51it/s]
 33%|███▎      | 105/322 [00:09<00:23,  9.25it/s]
 34%|███▍      | 111/322 [00:09<00:13, 15.42it/s]
 35%|███▌      | 114/322 [00:10<00:13, 14.93it/s]
 36%|███▋      | 117/322 [00:10<00:12, 17.04it/s]
 37%|███▋      | 120/322 [00:10<00:21,  9.19it/s]
 38%|███▊      | 123/322 [00:11<00:19, 10.24it/s]
 39%|███▉      | 125/322 [00:11<00:17, 11.38it/s]
 39%|███▉      | 127/322 [00:11<00:15, 12.33it/s]
 40%|████      | 129/322 [00:11<00:16, 11.52it/s]
 41%|████▏     | 133/322 [00:11<00:13, 14.28it/s]
 42%|████▏     | 135/322 [00:11<00:13, 13.60it/s]
 43%|████▎     | 137/322 [00:12<00:13, 13.23it/s]
 44%|████▍     | 141/322 [00:12<00:11, 15.38it/s]
 44%|████▍     | 143/322 [00:12<00:11, 15.25it/s]
 45%|████▌     | 145/322 [00:12<00:14, 11.94it/s]
 46%|████▌     | 147/322 [00:12<00:13, 13.30it/s]
 46%|████▋     | 149/322 [00:13<00:17,  9.95it/s]
 47%|████▋     | 151/322 [00:13<00:16, 10.19it/s]
 48%|████▊     | 155/322 [00:13<00:13, 12.77it/s]
 49%|████▉     | 159/322 [00:13<00:09, 17.25it/s]
 51%|█████     | 164/322 [00:14<00:11, 13.20it/s]
 52%|█████▏    | 166/322 [00:14<00:12, 12.80it/s]
 52%|█████▏    | 169/322 [00:14<00:13, 11.09it/s]
 53%|█████▎    | 172/322 [00:15<00:14, 10.21it/s]
 54%|█████▍    | 175/322 [00:15<00:12, 11.87it/s]
 55%|█████▌    | 178/322 [00:15<00:11, 12.62it/s]
 57%|█████▋    | 182/322 [00:15<00:08, 16.59it/s]
 58%|█████▊    | 186/322 [00:15<00:09, 14.64it/s]
 58%|█████▊    | 188/322 [00:16<00:13, 10.01it/s]
 59%|█████▉    | 191/322 [00:16<00:10, 11.93it/s]
 60%|█████▉    | 193/322 [00:16<00:13,  9.68it/s]
 61%|██████    | 196/322 [00:17<00:12,  9.93it/s]
 62%|██████▏   | 201/322 [00:17<00:08, 15.11it/s]
 63%|██████▎   | 204/322 [00:17<00:07, 15.17it/s]
 64%|██████▍   | 207/322 [00:17<00:08, 13.87it/s]
 65%|██████▍   | 209/322 [00:17<00:08, 12.60it/s]
 66%|██████▌   | 213/322 [00:18<00:06, 15.74it/s]
 67%|██████▋   | 216/322 [00:18<00:06, 16.19it/s]
 68%|██████▊   | 218/322 [00:18<00:07, 13.87it/s]
 68%|██████▊   | 220/322 [00:18<00:07, 13.06it/s]
 69%|██████▉   | 222/322 [00:18<00:08, 11.33it/s]
 70%|██████▉   | 224/322 [00:19<00:08, 11.41it/s]
 71%|███████   | 229/322 [00:19<00:05, 16.79it/s]
 72%|███████▏  | 231/322 [00:19<00:06, 14.21it/s]
 72%|███████▏  | 233/322 [00:19<00:09,  9.31it/s]
 73%|███████▎  | 235/322 [00:20<00:09,  9.14it/s]
 74%|███████▍  | 238/322 [00:20<00:07, 11.04it/s]
 75%|███████▍  | 240/322 [00:20<00:06, 11.85it/s]
 75%|███████▌  | 243/322 [00:20<00:05, 14.55it/s]
 76%|███████▌  | 245/322 [00:20<00:06, 12.56it/s]
 77%|███████▋  | 248/322 [00:20<00:05, 14.76it/s]
 78%|███████▊  | 250/322 [00:21<00:05, 13.02it/s]
 79%|███████▉  | 254/322 [00:21<00:04, 16.03it/s]
 80%|███████▉  | 257/322 [00:21<00:03, 16.64it/s]
 80%|████████  | 259/322 [00:21<00:05, 11.62it/s]
 81%|████████  | 261/322 [00:21<00:04, 12.71it/s]
 82%|████████▏ | 264/322 [00:21<00:03, 15.00it/s]
 83%|████████▎ | 266/322 [00:22<00:04, 13.57it/s]
 84%|████████▍ | 270/322 [00:22<00:03, 16.37it/s]
 85%|████████▍ | 273/322 [00:22<00:02, 17.63it/s]
 86%|████████▌ | 277/322 [00:22<00:02, 19.32it/s]
 88%|████████▊ | 282/322 [00:22<00:01, 24.62it/s]
 89%|████████▊ | 285/322 [00:22<00:01, 23.08it/s]
 90%|████████▉ | 289/322 [00:23<00:01, 25.10it/s]
 91%|█████████ | 292/322 [00:23<00:01, 21.65it/s]
 92%|█████████▏| 295/322 [00:23<00:01, 23.27it/s]
 93%|█████████▎| 298/322 [00:23<00:01, 23.22it/s]
 93%|█████████▎| 301/322 [00:23<00:01, 19.69it/s]
 94%|█████████▍| 304/322 [00:23<00:00, 21.81it/s]
 95%|█████████▌| 307/322 [00:24<00:01, 14.82it/s]
 96%|█████████▋| 310/322 [00:24<00:00, 16.02it/s]
 97%|█████████▋| 312/322 [00:24<00:01,  8.46it/s]
 98%|█████████▊| 314/322 [00:25<00:00,  8.59it/s]
 98%|█████████▊| 316/322 [00:25<00:00,  7.49it/s]
 99%|█████████▉| 318/322 [00:26<00:00,  5.17it/s]
 99%|█████████▉| 320/322 [00:26<00:00,  4.29it/s]
100%|█████████▉| 321/322 [00:29<00:00,  1.51it/s]
100%|██████████| 322/322 [00:53<00:00,  4.99s/it]
100%|██████████| 322/322 [00:53<00:00,  6.05it/s]
+
  0%|          | 0/322 [00:00<?, ?it/s]
100%|██████████| 322/322 [00:00<00:00, 25311.40it/s]
+Total results for monomer_protein: 322
+
  0%|          | 0/12 [00:00<?, ?it/s]
  8%|▊         | 1/12 [00:00<00:09,  1.14it/s]
 58%|█████▊    | 7/12 [00:00<00:00,  9.24it/s]
 92%|█████████▏| 11/12 [00:01<00:00,  5.88it/s]
100%|██████████| 12/12 [00:03<00:00,  3.87it/s]
+
  0%|          | 0/12 [00:00<?, ?it/s]
100%|██████████| 12/12 [00:00<00:00, 4094.67it/s]
+Total results for monomer_rna: 12
+
  0%|          | 0/12 [00:00<?, ?it/s]
  8%|▊         | 1/12 [00:00<00:08,  1.30it/s]
 67%|██████▋   | 8/12 [00:00<00:00, 11.70it/s]
100%|██████████| 12/12 [00:01<00:00, 13.08it/s]
100%|██████████| 12/12 [00:01<00:00, 10.48it/s]
+
  0%|          | 0/12 [00:00<?, ?it/s]
100%|██████████| 12/12 [00:00<00:00, 9301.73it/s]
+Total results for monomer_dna: 12
+
  0%|          | 0/251 [00:00<?, ?it/s]
  0%|          | 1/251 [00:02<08:51,  2.13s/it]
  2%|▏         | 6/251 [00:02<01:09,  3.51it/s]
  4%|▎         | 9/251 [00:02<00:47,  5.06it/s]
  4%|▍         | 11/251 [00:03<01:01,  3.90it/s]
  5%|▌         | 13/251 [00:03<00:54,  4.33it/s]
  6%|▌         | 15/251 [00:04<00:57,  4.07it/s]
  8%|▊         | 21/251 [00:04<00:27,  8.28it/s]
  9%|▉         | 23/251 [00:04<00:36,  6.31it/s]
 10%|▉         | 25/251 [00:05<00:30,  7.37it/s]
 11%|█         | 27/251 [00:05<00:31,  7.08it/s]
 12%|█▏        | 29/251 [00:05<00:28,  7.88it/s]
 12%|█▏        | 31/251 [00:05<00:29,  7.44it/s]
 13%|█▎        | 33/251 [00:05<00:24,  8.76it/s]
 15%|█▌        | 38/251 [00:06<00:17, 12.12it/s]
 16%|█▌        | 40/251 [00:06<00:24,  8.48it/s]
 17%|█▋        | 42/251 [00:06<00:22,  9.14it/s]
 18%|█▊        | 44/251 [00:07<00:22,  9.28it/s]
 18%|█▊        | 46/251 [00:07<00:24,  8.29it/s]
 20%|█▉        | 49/251 [00:07<00:19, 10.44it/s]
 20%|██        | 51/251 [00:07<00:19, 10.33it/s]
 21%|██        | 53/251 [00:08<00:26,  7.41it/s]
 22%|██▏       | 55/251 [00:08<00:23,  8.35it/s]
 23%|██▎       | 58/251 [00:08<00:20,  9.30it/s]
 24%|██▍       | 60/251 [00:08<00:18, 10.13it/s]
 25%|██▍       | 62/251 [00:09<00:19,  9.78it/s]
 25%|██▌       | 64/251 [00:09<00:24,  7.50it/s]
 26%|██▋       | 66/251 [00:09<00:28,  6.43it/s]
 27%|██▋       | 68/251 [00:09<00:23,  7.83it/s]
 28%|██▊       | 70/251 [00:10<00:21,  8.62it/s]
 29%|██▊       | 72/251 [00:10<00:26,  6.82it/s]
 29%|██▉       | 73/251 [00:10<00:29,  6.04it/s]
 30%|███       | 76/251 [00:11<00:23,  7.50it/s]
 31%|███       | 78/251 [00:11<00:21,  8.13it/s]
 32%|███▏      | 80/251 [00:11<00:20,  8.15it/s]
 32%|███▏      | 81/251 [00:11<00:22,  7.65it/s]
 33%|███▎      | 82/251 [00:11<00:25,  6.60it/s]
 34%|███▍      | 85/251 [00:12<00:19,  8.70it/s]
 34%|███▍      | 86/251 [00:12<00:18,  8.90it/s]
 35%|███▌      | 88/251 [00:12<00:22,  7.34it/s]
 36%|███▌      | 90/251 [00:12<00:21,  7.35it/s]
 36%|███▋      | 91/251 [00:13<00:27,  5.84it/s]
 37%|███▋      | 92/251 [00:13<00:25,  6.25it/s]
 37%|███▋      | 93/251 [00:13<00:23,  6.66it/s]
 38%|███▊      | 95/251 [00:13<00:17,  8.86it/s]
 39%|███▊      | 97/251 [00:13<00:14, 10.30it/s]
 39%|███▉      | 99/251 [00:14<00:17,  8.68it/s]
 40%|████      | 101/251 [00:14<00:15,  9.64it/s]
 41%|████      | 103/251 [00:14<00:13, 11.36it/s]
 42%|████▏     | 105/251 [00:14<00:12, 12.08it/s]
 43%|████▎     | 107/251 [00:14<00:17,  8.45it/s]
 44%|████▍     | 110/251 [00:15<00:14,  9.71it/s]
 45%|████▍     | 112/251 [00:15<00:13, 10.06it/s]
 45%|████▌     | 114/251 [00:15<00:17,  7.87it/s]
 46%|████▌     | 116/251 [00:15<00:16,  8.26it/s]
 48%|████▊     | 120/251 [00:15<00:10, 12.59it/s]
 49%|████▊     | 122/251 [00:16<00:10, 12.42it/s]
 50%|████▉     | 125/251 [00:16<00:08, 14.73it/s]
 51%|█████     | 127/251 [00:16<00:10, 11.71it/s]
 51%|█████▏    | 129/251 [00:17<00:17,  6.93it/s]
 52%|█████▏    | 131/251 [00:17<00:14,  8.27it/s]
 53%|█████▎    | 133/251 [00:17<00:14,  8.08it/s]
 54%|█████▍    | 135/251 [00:17<00:15,  7.68it/s]
 55%|█████▍    | 137/251 [00:18<00:16,  6.91it/s]
 55%|█████▍    | 138/251 [00:18<00:16,  6.92it/s]
 57%|█████▋    | 144/251 [00:18<00:10, 10.32it/s]
 59%|█████▊    | 147/251 [00:18<00:08, 11.63it/s]
 59%|█████▉    | 149/251 [00:19<00:11,  9.20it/s]
 60%|██████    | 151/251 [00:19<00:14,  6.80it/s]
 61%|██████    | 153/251 [00:19<00:12,  7.80it/s]
 62%|██████▏   | 155/251 [00:20<00:14,  6.79it/s]
 62%|██████▏   | 156/251 [00:20<00:13,  7.01it/s]
 63%|██████▎   | 157/251 [00:20<00:15,  6.23it/s]
 64%|██████▍   | 161/251 [00:21<00:12,  7.26it/s]
 65%|██████▍   | 162/251 [00:21<00:13,  6.84it/s]
 66%|██████▌   | 165/251 [00:21<00:09,  9.35it/s]
 67%|██████▋   | 167/251 [00:21<00:09,  8.94it/s]
 69%|██████▊   | 172/251 [00:22<00:06, 11.67it/s]
 69%|██████▉   | 174/251 [00:22<00:06, 11.24it/s]
 70%|███████   | 176/251 [00:22<00:06, 11.29it/s]
 72%|███████▏  | 180/251 [00:22<00:05, 11.94it/s]
 73%|███████▎  | 182/251 [00:23<00:06, 10.72it/s]
 73%|███████▎  | 184/251 [00:23<00:06, 10.17it/s]
 75%|███████▍  | 188/251 [00:23<00:05, 11.50it/s]
 76%|███████▌  | 190/251 [00:23<00:05, 10.67it/s]
 76%|███████▋  | 192/251 [00:23<00:05, 11.10it/s]
 77%|███████▋  | 194/251 [00:24<00:05, 10.67it/s]
 78%|███████▊  | 196/251 [00:24<00:04, 12.06it/s]
 79%|███████▉  | 198/251 [00:24<00:03, 13.39it/s]
 80%|███████▉  | 200/251 [00:24<00:03, 14.46it/s]
 80%|████████  | 202/251 [00:24<00:04, 10.51it/s]
 82%|████████▏ | 205/251 [00:24<00:03, 12.87it/s]
 83%|████████▎ | 208/251 [00:25<00:02, 15.10it/s]
 84%|████████▎ | 210/251 [00:25<00:02, 15.04it/s]
 84%|████████▍ | 212/251 [00:25<00:02, 14.02it/s]
 85%|████████▌ | 214/251 [00:25<00:02, 12.47it/s]
 86%|████████▌ | 216/251 [00:25<00:02, 12.48it/s]
 87%|████████▋ | 218/251 [00:26<00:03, 10.62it/s]
 88%|████████▊ | 220/251 [00:26<00:03,  9.33it/s]
 88%|████████▊ | 222/251 [00:26<00:02, 10.45it/s]
 89%|████████▉ | 224/251 [00:26<00:02,  9.91it/s]
 90%|█████████ | 226/251 [00:26<00:02,  9.09it/s]
 90%|█████████ | 227/251 [00:27<00:02,  8.74it/s]
 91%|█████████ | 228/251 [00:27<00:02,  8.85it/s]
 92%|█████████▏| 230/251 [00:27<00:03,  5.55it/s]
 92%|█████████▏| 232/251 [00:27<00:02,  7.32it/s]
 93%|█████████▎| 234/251 [00:28<00:02,  6.03it/s]
 94%|█████████▎| 235/251 [00:28<00:03,  4.61it/s]
 94%|█████████▍| 236/251 [00:29<00:04,  3.10it/s]
 95%|█████████▍| 238/251 [00:30<00:06,  2.03it/s]
 96%|█████████▌| 240/251 [00:32<00:05,  1.99it/s]
 96%|█████████▌| 241/251 [00:32<00:04,  2.26it/s]
 96%|█████████▋| 242/251 [00:32<00:03,  2.50it/s]
 97%|█████████▋| 243/251 [00:33<00:04,  1.68it/s]
 97%|█████████▋| 244/251 [00:34<00:03,  1.86it/s]
 98%|█████████▊| 245/251 [00:35<00:03,  1.54it/s]
 98%|█████████▊| 246/251 [00:35<00:02,  1.88it/s]
 98%|█████████▊| 247/251 [00:38<00:04,  1.23s/it]
 99%|█████████▉| 249/251 [00:38<00:01,  1.24it/s]
100%|█████████▉| 250/251 [00:41<00:01,  1.20s/it]
100%|██████████| 251/251 [00:49<00:00,  3.06s/it]
100%|██████████| 251/251 [00:49<00:00,  5.05it/s]
+
  0%|          | 0/251 [00:00<?, ?it/s]
100%|██████████| 251/251 [00:00<00:00, 9339.20it/s]
+Total results for interface_protein_protein: 251
+
  0%|          | 0/154 [00:00<?, ?it/s]
  1%|          | 1/154 [00:02<07:35,  2.97s/it]
  1%|▏         | 2/154 [00:03<03:22,  1.33s/it]
  2%|▏         | 3/154 [00:03<02:06,  1.20it/s]
  3%|▎         | 5/154 [00:04<01:34,  1.58it/s]
  5%|▍         | 7/154 [00:05<01:17,  1.89it/s]
  5%|▌         | 8/154 [00:05<01:06,  2.21it/s]
  6%|▌         | 9/154 [00:05<00:53,  2.71it/s]
  6%|▋         | 10/154 [00:05<00:45,  3.19it/s]
  9%|▉         | 14/154 [00:06<00:25,  5.55it/s]
 10%|▉         | 15/154 [00:06<00:25,  5.53it/s]
 10%|█         | 16/154 [00:06<00:24,  5.53it/s]
 12%|█▏        | 19/154 [00:06<00:15,  8.69it/s]
 14%|█▍        | 22/154 [00:06<00:15,  8.55it/s]
 16%|█▌        | 24/154 [00:07<00:16,  7.79it/s]
 16%|█▌        | 25/154 [00:07<00:17,  7.54it/s]
 18%|█▊        | 28/154 [00:07<00:13,  9.60it/s]
 20%|██        | 31/154 [00:07<00:10, 11.84it/s]
 21%|██▏       | 33/154 [00:08<00:14,  8.17it/s]
 23%|██▎       | 35/154 [00:08<00:17,  6.69it/s]
 25%|██▌       | 39/154 [00:08<00:12,  8.96it/s]
 29%|██▊       | 44/154 [00:09<00:09, 11.61it/s]
 30%|██▉       | 46/154 [00:09<00:11,  9.06it/s]
 31%|███       | 48/154 [00:09<00:11,  9.09it/s]
 33%|███▎      | 51/154 [00:09<00:09, 10.81it/s]
 34%|███▍      | 53/154 [00:10<00:08, 12.06it/s]
 36%|███▌      | 55/154 [00:10<00:11,  8.73it/s]
 37%|███▋      | 57/154 [00:10<00:10,  9.25it/s]
 38%|███▊      | 59/154 [00:10<00:10,  8.94it/s]
 40%|███▉      | 61/154 [00:11<00:17,  5.17it/s]
 40%|████      | 62/154 [00:11<00:17,  5.38it/s]
 41%|████      | 63/154 [00:12<00:25,  3.61it/s]
 42%|████▏     | 64/154 [00:12<00:23,  3.78it/s]
 44%|████▍     | 68/154 [00:13<00:14,  5.98it/s]
 45%|████▌     | 70/154 [00:13<00:12,  6.81it/s]
 46%|████▌     | 71/154 [00:13<00:14,  5.84it/s]
 47%|████▋     | 72/154 [00:13<00:13,  6.20it/s]
 49%|████▉     | 76/154 [00:13<00:08,  9.52it/s]
 51%|█████     | 78/154 [00:14<00:10,  7.25it/s]
 52%|█████▏    | 80/154 [00:14<00:09,  7.75it/s]
 53%|█████▎    | 81/154 [00:14<00:10,  7.28it/s]
 53%|█████▎    | 82/154 [00:15<00:15,  4.53it/s]
 55%|█████▍    | 84/154 [00:15<00:12,  5.82it/s]
 56%|█████▌    | 86/154 [00:15<00:10,  6.40it/s]
 56%|█████▋    | 87/154 [00:15<00:11,  5.68it/s]
 57%|█████▋    | 88/154 [00:16<00:11,  5.61it/s]
 58%|█████▊    | 89/154 [00:16<00:11,  5.49it/s]
 58%|█████▊    | 90/154 [00:16<00:14,  4.54it/s]
 60%|██████    | 93/154 [00:16<00:09,  6.78it/s]
 61%|██████    | 94/154 [00:17<00:10,  5.91it/s]
 62%|██████▏   | 96/154 [00:17<00:07,  7.87it/s]
 64%|██████▎   | 98/154 [00:17<00:07,  7.66it/s]
 64%|██████▍   | 99/154 [00:17<00:08,  6.30it/s]
 66%|██████▌   | 102/154 [00:17<00:05,  8.90it/s]
 68%|██████▊   | 104/154 [00:18<00:05,  9.96it/s]
 69%|██████▉   | 106/154 [00:18<00:08,  5.47it/s]
 70%|███████   | 108/154 [00:18<00:06,  6.90it/s]
 73%|███████▎  | 113/154 [00:19<00:05,  7.97it/s]
 75%|███████▍  | 115/154 [00:19<00:04,  9.19it/s]
 77%|███████▋  | 118/154 [00:19<00:03,  9.69it/s]
 78%|███████▊  | 120/154 [00:20<00:03, 10.20it/s]
 79%|███████▉  | 122/154 [00:20<00:02, 10.98it/s]
 81%|████████  | 124/154 [00:20<00:02, 12.35it/s]
 83%|████████▎ | 128/154 [00:20<00:01, 15.87it/s]
 84%|████████▍ | 130/154 [00:20<00:02, 11.97it/s]
 86%|████████▌ | 132/154 [00:21<00:02,  8.66it/s]
 87%|████████▋ | 134/154 [00:21<00:02,  7.07it/s]
 88%|████████▊ | 135/154 [00:21<00:03,  5.68it/s]
 90%|█████████ | 139/154 [00:22<00:01,  9.12it/s]
 92%|█████████▏| 141/154 [00:22<00:01,  9.58it/s]
 93%|█████████▎| 143/154 [00:22<00:01,  9.07it/s]
 94%|█████████▍| 145/154 [00:23<00:01,  4.66it/s]
 95%|█████████▍| 146/154 [00:24<00:02,  2.99it/s]
 96%|█████████▌| 148/154 [00:24<00:01,  3.73it/s]
 97%|█████████▋| 149/154 [00:24<00:01,  3.89it/s]
 97%|█████████▋| 150/154 [00:25<00:01,  3.11it/s]
 98%|█████████▊| 151/154 [00:26<00:01,  2.66it/s]
 99%|█████████▊| 152/154 [00:27<00:01,  1.60it/s]
 99%|█████████▉| 153/154 [00:29<00:01,  1.11s/it]
100%|██████████| 154/154 [00:30<00:00,  1.11it/s]
100%|██████████| 154/154 [00:30<00:00,  5.09it/s]
+
  0%|          | 0/154 [00:00<?, ?it/s]
100%|██████████| 154/154 [00:00<00:00, 12001.32it/s]
+Total results for interface_antibody_antigen: 154
+
  0%|          | 0/41 [00:00<?, ?it/s]
 10%|▉         | 4/41 [00:01<00:14,  2.54it/s]
 12%|█▏        | 5/41 [00:02<00:15,  2.37it/s]
 15%|█▍        | 6/41 [00:02<00:11,  2.99it/s]
 17%|█▋        | 7/41 [00:02<00:09,  3.66it/s]
 22%|██▏       | 9/41 [00:02<00:08,  3.67it/s]
 29%|██▉       | 12/41 [00:03<00:07,  3.66it/s]
 34%|███▍      | 14/41 [00:03<00:05,  4.52it/s]
 37%|███▋      | 15/41 [00:04<00:06,  4.09it/s]
 41%|████▏     | 17/41 [00:04<00:04,  5.58it/s]
 46%|████▋     | 19/41 [00:04<00:03,  6.84it/s]
 51%|█████     | 21/41 [00:04<00:02,  8.13it/s]
 56%|█████▌    | 23/41 [00:05<00:02,  6.96it/s]
 59%|█████▊    | 24/41 [00:05<00:02,  6.67it/s]
 61%|██████    | 25/41 [00:05<00:03,  4.07it/s]
 63%|██████▎   | 26/41 [00:06<00:04,  3.65it/s]
 66%|██████▌   | 27/41 [00:06<00:04,  3.11it/s]
 68%|██████▊   | 28/41 [00:06<00:04,  3.16it/s]
 71%|███████   | 29/41 [00:07<00:03,  3.30it/s]
 73%|███████▎  | 30/41 [00:07<00:02,  3.97it/s]
 76%|███████▌  | 31/41 [00:08<00:04,  2.44it/s]
 83%|████████▎ | 34/41 [00:08<00:01,  4.75it/s]
 85%|████████▌ | 35/41 [00:08<00:01,  4.91it/s]
 88%|████████▊ | 36/41 [00:09<00:01,  3.29it/s]
 90%|█████████ | 37/41 [00:09<00:01,  3.39it/s]
 93%|█████████▎| 38/41 [00:10<00:01,  1.96it/s]
 95%|█████████▌| 39/41 [00:16<00:04,  2.10s/it]
 98%|█████████▊| 40/41 [00:17<00:01,  1.60s/it]
100%|██████████| 41/41 [00:17<00:00,  1.35s/it]
100%|██████████| 41/41 [00:17<00:00,  2.29it/s]
+
  0%|          | 0/41 [00:00<?, ?it/s]
100%|██████████| 41/41 [00:00<00:00, 3077.59it/s]
+Total results for interface_protein_peptide: 41
+
  0%|          | 0/51 [00:00<?, ?it/s]
  6%|▌         | 3/51 [00:01<00:20,  2.29it/s]
 10%|▉         | 5/51 [00:02<00:18,  2.53it/s]
 16%|█▌        | 8/51 [00:02<00:09,  4.62it/s]
 20%|█▉        | 10/51 [00:02<00:07,  5.68it/s]
 24%|██▎       | 12/51 [00:02<00:05,  6.54it/s]
 27%|██▋       | 14/51 [00:02<00:05,  7.11it/s]
 31%|███▏      | 16/51 [00:03<00:06,  5.67it/s]
 33%|███▎      | 17/51 [00:03<00:07,  4.68it/s]
 35%|███▌      | 18/51 [00:04<00:10,  3.29it/s]
 39%|███▉      | 20/51 [00:04<00:06,  4.69it/s]
 49%|████▉     | 25/51 [00:04<00:02,  9.11it/s]
 55%|█████▍    | 28/51 [00:04<00:02,  9.66it/s]
 59%|█████▉    | 30/51 [00:05<00:04,  5.00it/s]
 63%|██████▎   | 32/51 [00:06<00:03,  5.27it/s]
 65%|██████▍   | 33/51 [00:06<00:04,  4.38it/s]
 67%|██████▋   | 34/51 [00:06<00:03,  4.34it/s]
 71%|███████   | 36/51 [00:07<00:02,  5.52it/s]
 73%|███████▎  | 37/51 [00:08<00:05,  2.49it/s]
 76%|███████▋  | 39/51 [00:08<00:03,  3.25it/s]
 80%|████████  | 41/51 [00:09<00:02,  3.73it/s]
 82%|████████▏ | 42/51 [00:11<00:06,  1.44it/s]
 86%|████████▋ | 44/51 [00:12<00:04,  1.68it/s]
 88%|████████▊ | 45/51 [00:12<00:03,  1.82it/s]
 90%|█████████ | 46/51 [00:15<00:05,  1.17s/it]
 92%|█████████▏| 47/51 [00:16<00:03,  1.03it/s]
 94%|█████████▍| 48/51 [00:16<00:02,  1.31it/s]
 96%|█████████▌| 49/51 [00:21<00:03,  1.80s/it]
 98%|█████████▊| 50/51 [00:21<00:01,  1.37s/it]
100%|██████████| 51/51 [00:21<00:00,  2.38it/s]
+
  0%|          | 0/51 [00:00<?, ?it/s]
100%|██████████| 51/51 [00:00<00:00, 7153.92it/s]
+Total results for interface_protein_rna: 51
+
  0%|          | 0/51 [00:00<?, ?it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+
  2%|▏         | 1/51 [00:00<00:12,  3.89it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+
 20%|█▉        | 10/51 [00:00<00:01, 31.46it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain B, native chain E1_3: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 29%|██▉       | 15/51 [00:00<00:01, 31.56it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 2 mismatches
+if they should be treated as homologous.
+
 37%|███▋      | 19/51 [00:00<00:00, 33.01it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain C, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain C, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 7 mismatches
+if they should be treated as homologous.
+
 45%|████▌     | 23/51 [00:00<00:00, 32.14it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain D, native chain E2: 6 mismatches
+if they should be treated as homologous.
+
 53%|█████▎    | 27/51 [00:00<00:00, 28.55it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain F, native chain E2_1: 8 mismatches, Model chain F, native chain E2_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain F, native chain E2_1: 8 mismatches, Model chain F, native chain E2_2: 8 mismatches, Model chain D, native chain E3_1: 9 mismatches, Model chain D, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+
 61%|██████    | 31/51 [00:01<00:00, 23.12it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain B, native chain E5: 1 mismatches, Model chain D, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1: 8 mismatches, Model chain E, native chain E2: 6 mismatches, Model chain E, native chain E3: 5 mismatches, Model chain C, native chain E5: 1 mismatches, Model chain E, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain A, native chain E5: 1 mismatches, Model chain D, native chain E5: 1 mismatches
+if they should be treated as homologous.
+
 67%|██████▋   | 34/51 [00:01<00:00, 17.93it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 9 mismatches, Model chain B, native chain E1_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1: 7 mismatches, Model chain F, native chain E2: 6 mismatches, Model chain F, native chain E3: 5 mismatches, Model chain F, native chain E4_1: 2 mismatches, Model chain F, native chain E4_2: 2 mismatches, Model chain F, native chain E4_3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1: 7 mismatches, Model chain F, native chain E2: 6 mismatches, Model chain F, native chain E3: 5 mismatches, Model chain F, native chain E4_1: 2 mismatches, Model chain F, native chain E4_2: 2 mismatches, Model chain F, native chain E4_3: 2 mismatches, Model chain C, native chain E5: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E3: 9 mismatches, Model chain B, native chain E3: 5 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain B, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E4: 7 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E5: 8 mismatches
+if they should be treated as homologous.
+
 75%|███████▍  | 38/51 [00:01<00:00, 14.38it/s]
 82%|████████▏ | 42/51 [00:02<00:00, 17.28it/s]
 88%|████████▊ | 45/51 [00:02<00:00, 16.36it/s]
 92%|█████████▏| 47/51 [00:02<00:00, 15.59it/s]
 96%|█████████▌| 49/51 [00:02<00:00,  9.15it/s]
100%|██████████| 51/51 [00:04<00:00,  4.15it/s]
100%|██████████| 51/51 [00:04<00:00, 11.99it/s]
+Total results for interface_protein_rna: 51
+
  0%|          | 0/311 [00:00<?, ?it/s]
  2%|▏         | 6/311 [00:01<01:33,  3.25it/s]
  3%|▎         | 8/311 [00:01<01:08,  4.43it/s]
  3%|▎         | 10/311 [00:02<01:00,  4.96it/s]
  5%|▍         | 14/311 [00:02<00:37,  7.90it/s]
  5%|▌         | 17/311 [00:02<00:28, 10.39it/s]
  7%|▋         | 21/311 [00:02<00:20, 14.45it/s]
  8%|▊         | 24/311 [00:02<00:16, 17.04it/s]
  9%|▊         | 27/311 [00:02<00:15, 18.87it/s]
 10%|▉         | 30/311 [00:02<00:13, 21.18it/s]
 11%|█         | 33/311 [00:03<00:13, 20.78it/s]
 12%|█▏        | 36/311 [00:04<00:40,  6.85it/s]
 12%|█▏        | 38/311 [00:04<00:37,  7.28it/s]
 13%|█▎        | 40/311 [00:04<00:32,  8.44it/s]
 14%|█▎        | 42/311 [00:04<00:28,  9.38it/s]
 14%|█▍        | 44/311 [00:05<00:31,  8.61it/s]
 15%|█▍        | 46/311 [00:05<00:30,  8.69it/s]
 15%|█▌        | 48/311 [00:05<00:25, 10.17it/s]
 16%|█▌        | 50/311 [00:05<00:28,  9.10it/s]
 17%|█▋        | 52/311 [00:05<00:28,  9.08it/s]
 17%|█▋        | 54/311 [00:06<00:27,  9.26it/s]
 18%|█▊        | 57/311 [00:06<00:32,  7.76it/s]
 19%|█▊        | 58/311 [00:06<00:38,  6.54it/s]
 19%|█▉        | 60/311 [00:06<00:33,  7.52it/s]
 20%|██        | 63/311 [00:07<00:25,  9.65it/s]
 21%|██        | 65/311 [00:07<00:22, 10.78it/s]
 22%|██▏       | 67/311 [00:07<00:24, 10.01it/s]
 22%|██▏       | 69/311 [00:07<00:26,  9.20it/s]
 23%|██▎       | 71/311 [00:08<00:28,  8.57it/s]
 23%|██▎       | 73/311 [00:08<00:27,  8.53it/s]
 24%|██▍       | 76/311 [00:08<00:20, 11.40it/s]
 25%|██▌       | 78/311 [00:08<00:22, 10.15it/s]
 26%|██▌       | 80/311 [00:09<00:42,  5.45it/s]
 26%|██▋       | 82/311 [00:09<00:35,  6.47it/s]
 27%|██▋       | 84/311 [00:09<00:30,  7.40it/s]
 28%|██▊       | 86/311 [00:10<00:29,  7.72it/s]
 28%|██▊       | 87/311 [00:10<00:31,  7.00it/s]
 28%|██▊       | 88/311 [00:10<00:30,  7.24it/s]
 29%|██▊       | 89/311 [00:10<00:35,  6.22it/s]
 29%|██▉       | 91/311 [00:10<00:36,  6.10it/s]
 30%|██▉       | 92/311 [00:11<00:44,  4.95it/s]
 30%|██▉       | 93/311 [00:11<00:38,  5.62it/s]
 31%|███       | 95/311 [00:11<00:29,  7.40it/s]
 31%|███       | 97/311 [00:11<00:28,  7.51it/s]
 32%|███▏      | 98/311 [00:11<00:28,  7.59it/s]
 32%|███▏      | 101/311 [00:12<00:21,  9.65it/s]
 33%|███▎      | 103/311 [00:12<00:34,  5.96it/s]
 34%|███▍      | 106/311 [00:13<00:28,  7.27it/s]
 34%|███▍      | 107/311 [00:13<00:34,  5.85it/s]
 35%|███▍      | 108/311 [00:14<00:55,  3.69it/s]
 35%|███▌      | 110/311 [00:14<00:47,  4.21it/s]
 36%|███▌      | 112/311 [00:14<00:36,  5.42it/s]
 36%|███▋      | 113/311 [00:14<00:37,  5.33it/s]
 37%|███▋      | 115/311 [00:14<00:27,  7.00it/s]
 37%|███▋      | 116/311 [00:15<00:31,  6.18it/s]
 38%|███▊      | 117/311 [00:15<00:50,  3.86it/s]
 38%|███▊      | 119/311 [00:16<00:41,  4.66it/s]
 41%|████      | 128/311 [00:16<00:14, 12.71it/s]
 42%|████▏     | 130/311 [00:16<00:22,  8.14it/s]
 42%|████▏     | 132/311 [00:17<00:20,  8.59it/s]
 43%|████▎     | 134/311 [00:17<00:22,  7.78it/s]
 44%|████▎     | 136/311 [00:17<00:27,  6.35it/s]
 44%|████▍     | 138/311 [00:18<00:22,  7.69it/s]
 46%|████▌     | 142/311 [00:18<00:15, 10.81it/s]
 47%|████▋     | 145/311 [00:18<00:15, 11.05it/s]
 47%|████▋     | 147/311 [00:18<00:14, 11.53it/s]
 48%|████▊     | 149/311 [00:19<00:21,  7.47it/s]
 49%|████▊     | 151/311 [00:19<00:23,  6.72it/s]
 49%|████▉     | 152/311 [00:19<00:22,  7.03it/s]
 50%|█████     | 156/311 [00:19<00:14, 10.47it/s]
 51%|█████     | 158/311 [00:20<00:14, 10.32it/s]
 51%|█████▏    | 160/311 [00:20<00:16,  9.13it/s]
 52%|█████▏    | 162/311 [00:20<00:24,  6.19it/s]
 52%|█████▏    | 163/311 [00:21<00:25,  5.86it/s]
 53%|█████▎    | 166/311 [00:21<00:18,  7.82it/s]
 54%|█████▎    | 167/311 [00:21<00:26,  5.48it/s]
 54%|█████▍    | 168/311 [00:21<00:25,  5.71it/s]
 57%|█████▋    | 176/311 [00:22<00:09, 14.96it/s]
 58%|█████▊    | 179/311 [00:22<00:10, 12.08it/s]
 58%|█████▊    | 181/311 [00:23<00:16,  7.98it/s]
 59%|█████▉    | 183/311 [00:23<00:18,  7.02it/s]
 59%|█████▉    | 185/311 [00:23<00:18,  6.87it/s]
 60%|█████▉    | 186/311 [00:23<00:18,  6.82it/s]
 60%|██████    | 188/311 [00:24<00:16,  7.35it/s]
 61%|██████▏   | 191/311 [00:24<00:12,  9.75it/s]
 62%|██████▏   | 193/311 [00:25<00:22,  5.25it/s]
 63%|██████▎   | 197/311 [00:25<00:14,  8.03it/s]
 65%|██████▍   | 201/311 [00:25<00:10, 10.28it/s]
 66%|██████▌   | 204/311 [00:25<00:08, 12.29it/s]
 67%|██████▋   | 208/311 [00:25<00:06, 15.07it/s]
 68%|██████▊   | 211/311 [00:26<00:08, 11.37it/s]
 68%|██████▊   | 213/311 [00:26<00:11,  8.51it/s]
 69%|██████▉   | 216/311 [00:26<00:09, 10.06it/s]
 70%|███████   | 218/311 [00:26<00:08, 11.11it/s]
 71%|███████   | 220/311 [00:27<00:12,  7.16it/s]
 71%|███████▏  | 222/311 [00:27<00:10,  8.54it/s]
 72%|███████▏  | 225/311 [00:27<00:08, 10.57it/s]
 73%|███████▎  | 227/311 [00:27<00:07, 10.75it/s]
 74%|███████▎  | 229/311 [00:28<00:07, 10.59it/s]
 74%|███████▍  | 231/311 [00:28<00:07, 10.23it/s]
 75%|███████▍  | 233/311 [00:28<00:06, 11.59it/s]
 76%|███████▌  | 235/311 [00:28<00:07,  9.86it/s]
 76%|███████▌  | 237/311 [00:29<00:10,  7.04it/s]
 77%|███████▋  | 238/311 [00:29<00:10,  7.00it/s]
 77%|███████▋  | 239/311 [00:29<00:11,  6.37it/s]
 78%|███████▊  | 243/311 [00:29<00:07,  8.84it/s]
 78%|███████▊  | 244/311 [00:30<00:07,  8.78it/s]
 79%|███████▉  | 245/311 [00:30<00:09,  7.08it/s]
 79%|███████▉  | 246/311 [00:30<00:09,  6.59it/s]
 79%|███████▉  | 247/311 [00:30<00:09,  6.82it/s]
 80%|████████  | 249/311 [00:30<00:07,  8.02it/s]
 82%|████████▏ | 254/311 [00:30<00:03, 15.51it/s]
 83%|████████▎ | 258/311 [00:31<00:02, 20.27it/s]
 84%|████████▍ | 261/311 [00:31<00:03, 15.93it/s]
 85%|████████▍ | 264/311 [00:32<00:05,  8.25it/s]
 86%|████████▌ | 266/311 [00:32<00:04,  9.03it/s]
 86%|████████▌ | 268/311 [00:32<00:04, 10.01it/s]
 87%|████████▋ | 272/311 [00:32<00:02, 13.61it/s]
 89%|████████▊ | 276/311 [00:32<00:02, 17.50it/s]
 90%|████████▉ | 279/311 [00:32<00:02, 15.17it/s]
 90%|█████████ | 281/311 [00:33<00:02, 14.46it/s]
 91%|█████████ | 283/311 [00:33<00:02, 11.11it/s]
 92%|█████████▏| 285/311 [00:33<00:02, 10.83it/s]
 92%|█████████▏| 287/311 [00:33<00:02,  9.33it/s]
 93%|█████████▎| 289/311 [00:33<00:02, 10.53it/s]
 94%|█████████▎| 291/311 [00:34<00:02,  7.09it/s]
 94%|█████████▍| 293/311 [00:34<00:02,  6.11it/s]
 95%|█████████▍| 295/311 [00:35<00:02,  7.32it/s]
 96%|█████████▌| 298/311 [00:35<00:01,  8.75it/s]
 96%|█████████▋| 300/311 [00:35<00:01, 10.23it/s]
 97%|█████████▋| 302/311 [00:35<00:01,  7.13it/s]
 98%|█████████▊| 304/311 [00:36<00:00,  8.10it/s]
 98%|█████████▊| 306/311 [00:36<00:00,  9.61it/s]
 99%|█████████▉| 308/311 [00:37<00:00,  4.83it/s]
 99%|█████████▉| 309/311 [00:37<00:00,  4.07it/s]
100%|█████████▉| 310/311 [00:38<00:00,  3.00it/s]
100%|██████████| 311/311 [00:38<00:00,  8.11it/s]
+
  0%|          | 0/311 [00:00<?, ?it/s]
100%|██████████| 311/311 [00:00<00:00, 21294.01it/s]
+Total results for interface_protein_dna: 311
+
  0%|          | 0/311 [00:00<?, ?it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain B, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
  0%|          | 1/311 [00:00<01:06,  4.66it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain C, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain D, native chain E2: 9 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain C, native chain E1: 5 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 5 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 3 mismatches, Model chain B, native chain E5: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 8 mismatches, Model chain B, native chain E2: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8pw0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 201, in dockq
+    best_result, best_dockq = run_chain_map(best_mapping)
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 301, in calc_DockQ
+    aligned_sample_2, aligned_ref_2 = get_aligned_residues(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 124, in get_aligned_residues
+    rB = next(resB)
+StopIteration
+
+
  4%|▎         | 11/311 [00:00<00:09, 30.44it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 8 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 8 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 3 mismatches, Model chain C, native chain E4: 3 mismatches, Model chain C, native chain E5: 2 mismatches
+if they should be treated as homologous.
+
  6%|▋         | 20/311 [00:00<00:07, 40.55it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain B, native chain E2: 1 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 9 mismatches, Model chain F, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 9 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 6 mismatches, Model chain F, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 9 mismatches, Model chain A, native chain E2_2: 9 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+
  9%|▉         | 28/311 [00:00<00:05, 49.87it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3_1: 7 mismatches, Model chain B, native chain E3_2: 7 mismatches, Model chain B, native chain E3_3: 7 mismatches
+if they should be treated as homologous.
+
 11%|█         | 34/311 [00:00<00:05, 48.45it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2_1: 7 mismatches, Model chain C, native chain E2_2: 7 mismatches, Model chain C, native chain E2_3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E1_1: 6 mismatches, Model chain C-2, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain C-2, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain C-2, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D-2, native chain E1_1: 3 mismatches, Model chain D-2, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain D-2, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain D-2, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain C, native chain E1_3: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain D, native chain E1_3: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+
 13%|█▎        | 40/311 [00:00<00:06, 44.94it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 4 mismatches, Model chain C, native chain E2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3_1: 8 mismatches, Model chain B, native chain E3_2: 8 mismatches, Model chain B, native chain E3_3: 8 mismatches, Model chain B, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain B, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain D, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 15%|█▌        | 48/311 [00:01<00:05, 50.71it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches
+if they should be treated as homologous.
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+ERROR:root:The specified native chain D is not found in the PDB structure.
+This is possibly due to using the wrong chain identifier in --mapping,
+or forgetting to specify --small_molecule if this is a HETATM chain.
+If working with mmCIF files, make sure you use the right chain identifier.
+            
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 8 mismatches, Model chain D, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain D, native chain E2_2: 8 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8sv3-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 621, in run_on_all_native_interfaces
+    native_chains = tuple([native_structure[chain] for chain in chain_pair])
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 621, in <listcomp>
+    native_chains = tuple([native_structure[chain] for chain in chain_pair])
+  File "/opt/foldbench-env/lib/python3.9/site-packages/Bio/PDB/Entity.py", line 65, in __getitem__
+    return self.child_dict[id]
+KeyError: 'D'
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain C, native chain E3: 6 mismatches, Model chain C, native chain E4: 6 mismatches, Model chain E, native chain E4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 4 mismatches, Model chain F, native chain E1_2: 4 mismatches, Model chain F, native chain E2_1: 6 mismatches, Model chain F, native chain E2_2: 6 mismatches, Model chain C, native chain E3: 6 mismatches, Model chain F, native chain E3: 4 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches, Model chain A, native chain E3_3: 9 mismatches, Model chain A, native chain E3_4: 9 mismatches, Model chain A, native chain E3_5: 9 mismatches, Model chain A, native chain E3_6: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches, Model chain B, native chain E3_3: 9 mismatches, Model chain B, native chain E3_4: 9 mismatches, Model chain B, native chain E3_5: 9 mismatches, Model chain B, native chain E3_6: 9 mismatches
+if they should be treated as homologous.
+
 17%|█▋        | 54/311 [00:01<00:05, 44.12it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 8 mismatches, Model chain I, native chain E1_2: 8 mismatches, Model chain I, native chain E1_3: 8 mismatches, Model chain I, native chain E1_4: 8 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain I, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain I, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain I, native chain E2_3: 5 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain I, native chain E2_4: 5 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain D, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain I, native chain E1_1: 8 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain I, native chain E1_2: 8 mismatches, Model chain B, native chain E1_3: 2 mismatches, Model chain I, native chain E1_3: 8 mismatches, Model chain B, native chain E1_4: 2 mismatches, Model chain I, native chain E1_4: 8 mismatches, Model chain I, native chain E2_1: 5 mismatches, Model chain I, native chain E2_2: 5 mismatches, Model chain I, native chain E2_3: 5 mismatches, Model chain I, native chain E2_4: 5 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain B, native chain E3_2: 5 mismatches, Model chain B, native chain E3_3: 5 mismatches, Model chain B, native chain E3_4: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain B, native chain E1_3: 6 mismatches, Model chain B, native chain E1_4: 6 mismatches, Model chain B, native chain E1_5: 6 mismatches, Model chain B, native chain E1_6: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E2_3: 6 mismatches, Model chain A, native chain E2_4: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain B, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain B, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain B, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches, Model chain B, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+
 19%|█▉        | 59/311 [00:01<00:07, 35.80it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 8 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain C, native chain E1_3: 8 mismatches, Model chain C, native chain E1_4: 8 mismatches, Model chain C, native chain E1_5: 8 mismatches, Model chain C, native chain E1_6: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain C, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain C, native chain E2_2: 8 mismatches, Model chain A, native chain E2_3: 6 mismatches, Model chain C, native chain E2_3: 8 mismatches, Model chain A, native chain E2_4: 6 mismatches, Model chain C, native chain E2_4: 8 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain A, native chain E3_4: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain B, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain B, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 4 mismatches, Model chain B, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain C, native chain E1_3: 4 mismatches, Model chain C, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain C, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain C, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain C, native chain E2_3: 1 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain C, native chain E2_4: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+
 23%|██▎       | 70/311 [00:01<00:04, 49.88it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 3 mismatches, Model chain C, native chain E1: 6 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+
 24%|██▍       | 76/311 [00:01<00:04, 49.98it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 6 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain A, native chain E2_3: 8 mismatches, Model chain I, native chain E2_3: 8 mismatches, Model chain A, native chain E2_4: 8 mismatches, Model chain I, native chain E2_4: 8 mismatches, Model chain A, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 6 mismatches, Model chain A, native chain E3_3: 6 mismatches, Model chain A, native chain E3_4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 8 mismatches, Model chain I, native chain E1_1: 6 mismatches, Model chain B, native chain E1_2: 8 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain B, native chain E1_3: 8 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain B, native chain E1_4: 8 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain I, native chain E2_3: 8 mismatches, Model chain I, native chain E2_4: 8 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain C, native chain E1: 9 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain B, native chain E3: 8 mismatches
+if they should be treated as homologous.
+
 26%|██▋       | 82/311 [00:01<00:05, 44.62it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 9 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain A, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain C, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8q43-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 305, in calc_DockQ
+    sample_res_distances = get_residue_distances(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 163, in get_residue_distances
+    model_res_distances = residue_distances(
+  File "/opt/foldbench/evaluation/DockQv2/operations_nocy.py", line 29, in residue_distances
+    atom_distances = get_distances_across_chains(atom_coordinates1, atom_coordinates2)
+  File "/opt/foldbench/evaluation/DockQv2/operations_nocy.py", line 6, in get_distances_across_chains
+    distances = ((model_A_atoms[:, None] - model_B_atoms[None, :]) ** 2).sum(-1)
+ValueError: operands could not be broadcast together with shapes (3390,1,3) (1,0) 
+
+
 28%|██▊       | 87/311 [00:02<00:05, 42.39it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain C, native chain E2_1: 6 mismatches, Model chain C, native chain E2_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 1 mismatches
+if they should be treated as homologous.
+
 30%|███       | 94/311 [00:02<00:04, 47.18it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+
 32%|███▏      | 100/311 [00:02<00:04, 43.77it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 5 mismatches, Model chain C, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyp-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyp-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 5 mismatches, Model chain C, native chain E1_2: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyn-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 3 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyn-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain C, native chain E1_3: 3 mismatches, Model chain A-2, native chain E2: 3 mismatches, Model chain A-2, native chain E3: 8 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 7uyo-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+
 34%|███▍      | 106/311 [00:02<00:04, 45.44it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain D, native chain E1_3: 8 mismatches, Model chain A-2, native chain E2: 3 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A-2, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E1_1: 5 mismatches, Model chain C-2, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 36%|███▌      | 111/311 [00:02<00:04, 45.53it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 2 mismatches, Model chain D, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain D, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain D, native chain E5: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain F, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain F, native chain E3: 3 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain F, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain C, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain C, native chain E4: 2 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain C, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain E, native chain E2: 2 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain E, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches, Model chain A, native chain E5: 3 mismatches, Model chain E, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain D, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain D, native chain E2_2: 8 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+
 37%|███▋      | 116/311 [00:02<00:05, 38.04it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 3 mismatches, Model chain A, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E1: 1 mismatches, Model chain C, native chain E1: 9 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 39%|███▉      | 121/311 [00:02<00:06, 29.76it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain C, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain C, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 41%|████      | 126/311 [00:03<00:05, 33.39it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 8 mismatches, Model chain D, native chain E1_2: 8 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain D, native chain E2_1: 9 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain D, native chain E2_2: 9 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+
 42%|████▏     | 132/311 [00:03<00:04, 38.84it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 2 mismatches, Model chain B, native chain E1_2: 2 mismatches, Model chain B, native chain E1_3: 2 mismatches, Model chain B, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain B, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain B, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches, Model chain B, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain C, native chain E1_3: 1 mismatches, Model chain C, native chain E1_4: 1 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain C, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain C, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain C, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain C, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain A, native chain E2_4: 4 mismatches
+if they should be treated as homologous.
+
 44%|████▍     | 137/311 [00:03<00:06, 27.99it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches
+if they should be treated as homologous.
+
 45%|████▌     | 141/311 [00:03<00:05, 28.67it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E2: 5 mismatches
+if they should be treated as homologous.
+
 47%|████▋     | 145/311 [00:03<00:06, 25.95it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 9 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+
 48%|████▊     | 149/311 [00:03<00:06, 26.14it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 3 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain B, native chain E3: 6 mismatches, Model chain D, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain C, native chain E2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 3 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain D, native chain E3: 5 mismatches, Model chain A, native chain E4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain B, native chain E3: 6 mismatches, Model chain C, native chain E4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches
+if they should be treated as homologous.
+
 49%|████▉     | 153/311 [00:04<00:05, 27.32it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain C, native chain E2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 2 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain C, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches, Model chain C, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain D, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches, Model chain D, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 9 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain C, native chain E1_4: 9 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain C, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain C, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain F, native chain E3: 2 mismatches, Model chain A, native chain E4: 1 mismatches, Model chain F, native chain E4: 1 mismatches, Model chain A, native chain E5: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 1 mismatches, Model chain E, native chain E1_2: 1 mismatches, Model chain E, native chain E2: 1 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain E, native chain E3: 1 mismatches, Model chain B, native chain E4: 1 mismatches, Model chain B, native chain E5: 2 mismatches, Model chain E, native chain E5: 1 mismatches
+if they should be treated as homologous.
+
 50%|█████     | 157/311 [00:04<00:05, 28.98it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 5 mismatches, Model chain D, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 5 mismatches, Model chain D, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 52%|█████▏    | 161/311 [00:04<00:04, 30.65it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain D, native chain E1_3: 6 mismatches, Model chain D, native chain E1_4: 6 mismatches, Model chain A, native chain E2_1: 8 mismatches, Model chain D, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 8 mismatches, Model chain D, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain A, native chain E3_2: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 5 mismatches, Model chain E, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain E, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain E, native chain E1_2: 5 mismatches, Model chain E, native chain E2_1: 6 mismatches, Model chain E, native chain E2_2: 6 mismatches, Model chain B, native chain E3_1: 6 mismatches, Model chain B, native chain E3_2: 6 mismatches
+if they should be treated as homologous.
+
 54%|█████▎    | 167/311 [00:04<00:04, 35.40it/s]
 56%|█████▌    | 174/311 [00:04<00:03, 38.66it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 7 mismatches, Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain B, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+
 59%|█████▉    | 183/311 [00:04<00:02, 50.66it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain B, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 61%|██████    | 189/311 [00:04<00:02, 52.89it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain C, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain C, native chain E3_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain D, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain D, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 8 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 5 mismatches, Model chain B, native chain E1_2: 5 mismatches
+if they should be treated as homologous.
+
 63%|██████▎   | 195/311 [00:04<00:02, 47.51it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain D, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 2 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain C, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 9 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain C, native chain E1_4: 9 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 9 mismatches, Model chain A, native chain E3_2: 9 mismatches, Model chain A, native chain E3_3: 9 mismatches, Model chain A, native chain E3_4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain C, native chain E1_1: 9 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain C, native chain E1_2: 9 mismatches, Model chain B, native chain E1_3: 3 mismatches, Model chain C, native chain E1_3: 9 mismatches, Model chain B, native chain E1_4: 3 mismatches, Model chain C, native chain E1_4: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 3 mismatches, Model chain C, native chain E1_2: 3 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain C, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 3 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain D, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E1_3: 4 mismatches, Model chain E, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain E, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain E, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain E, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 2 mismatches, Model chain E, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 2 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 4 mismatches, Model chain E, native chain E1_2: 4 mismatches, Model chain E, native chain E1_3: 4 mismatches, Model chain E, native chain E1_4: 4 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain E, native chain E3_1: 6 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain E, native chain E3_2: 6 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain E, native chain E3_3: 6 mismatches, Model chain A, native chain E3_4: 2 mismatches, Model chain E, native chain E3_4: 6 mismatches
+if they should be treated as homologous.
+
 65%|██████▍   | 201/311 [00:05<00:02, 38.31it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain F, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain F, native chain E2_2: 6 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain F, native chain E2_3: 6 mismatches, Model chain A, native chain E2_4: 2 mismatches, Model chain F, native chain E2_4: 6 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain A, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 6 mismatches, Model chain D, native chain E2: 7 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain D, native chain E3: 4 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain D, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain F, native chain E2_1: 4 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain F, native chain E2_2: 4 mismatches, Model chain A, native chain E2_3: 3 mismatches, Model chain F, native chain E2_3: 4 mismatches, Model chain A, native chain E2_4: 3 mismatches, Model chain F, native chain E2_4: 4 mismatches, Model chain A, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 2 mismatches, Model chain A, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches, Model chain B, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
 67%|██████▋   | 207/311 [00:05<00:02, 42.47it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain C, native chain E4: 4 mismatches, Model chain C, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain E, native chain E3: 4 mismatches, Model chain A, native chain E4: 6 mismatches, Model chain E, native chain E4: 4 mismatches, Model chain E, native chain E6: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain B, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 4 mismatches, Model chain C, native chain E2: 8 mismatches, Model chain C, native chain E4: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain C, native chain E2: 3 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain D, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+
 68%|██████▊   | 212/311 [00:05<00:02, 42.10it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 2 mismatches, Model chain D, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 3 mismatches, Model chain E, native chain E1_2: 3 mismatches, Model chain E, native chain E3: 2 mismatches, Model chain A, native chain E4: 3 mismatches
+if they should be treated as homologous.
+
 71%|███████   | 220/311 [00:05<00:01, 48.08it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 5 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 1 mismatches, Model chain B, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 8 mismatches, Model chain C, native chain E2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain C, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain C, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 2 mismatches, Model chain C, native chain E2: 9 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain D, native chain E3: 3 mismatches, Model chain C, native chain E4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 73%|███████▎  | 226/311 [00:05<00:02, 41.29it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 2 mismatches, Model chain F, native chain E1_2: 2 mismatches, Model chain F, native chain E1_3: 2 mismatches, Model chain F, native chain E1_4: 2 mismatches, Model chain F, native chain E1_5: 2 mismatches, Model chain A, native chain E2_1: 4 mismatches, Model chain F, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain F, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain F, native chain E2_3: 2 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain F, native chain E3_1: 2 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain F, native chain E3_2: 2 mismatches, Model chain A, native chain E3_3: 4 mismatches, Model chain F, native chain E3_3: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8rpx-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in dockq
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 188, in <listcomp>
+    result_this_mappings = [run_chain_map(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 634, in run_on_all_native_interfaces
+    info = run_on_chains(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 574, in run_on_chains
+    info = calc_DockQ(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 301, in calc_DockQ
+    aligned_sample_2, aligned_ref_2 = get_aligned_residues(
+  File "/opt/foldbench/evaluation/DockQv2/DockQ.py", line 124, in get_aligned_residues
+    rB = next(resB)
+StopIteration
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 4 mismatches, Model chain C, native chain E1_2: 4 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E2: 7 mismatches
+if they should be treated as homologous.
+
 75%|███████▍  | 233/311 [00:05<00:01, 43.49it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2_1: 4 mismatches, Model chain G, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 4 mismatches, Model chain G, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 4 mismatches, Model chain G, native chain E2_3: 1 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 9 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain A, native chain E2: 9 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E3: 8 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 7 mismatches, Model chain C, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 6 mismatches, Model chain D, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches
+if they should be treated as homologous.
+
 77%|███████▋  | 238/311 [00:06<00:01, 41.57it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain F, native chain E1_1: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain F, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain F, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 3 mismatches, Model chain A, native chain E3_3: 3 mismatches, Model chain A, native chain E3_4: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 3 mismatches, Model chain E, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 3 mismatches, Model chain E, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 3 mismatches, Model chain E, native chain E2_2: 1 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain A, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain F, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2_1: 1 mismatches, Model chain F, native chain E2_2: 1 mismatches, Model chain B, native chain E3_1: 1 mismatches, Model chain B, native chain E3_2: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 6 mismatches, Model chain F, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 6 mismatches, Model chain F, native chain E1_2: 3 mismatches, Model chain F, native chain E2_1: 3 mismatches, Model chain F, native chain E2_2: 3 mismatches, Model chain B, native chain E3_1: 2 mismatches, Model chain B, native chain E3_2: 2 mismatches, Model chain B, native chain E3_3: 2 mismatches, Model chain B, native chain E3_4: 2 mismatches
+if they should be treated as homologous.
+
 79%|███████▉  | 247/311 [00:06<00:01, 49.66it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 4 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 6 mismatches, Model chain A, native chain E4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 3 mismatches, Model chain C, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 8 mismatches, Model chain C, native chain E1: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 1 mismatches, Model chain D, native chain E1_2: 1 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain D, native chain E2: 5 mismatches, Model chain A, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E1: 1 mismatches, Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 6 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 81%|████████▏ | 253/311 [00:06<00:01, 51.43it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 3 mismatches, Model chain D, native chain E1_2: 3 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain A, native chain E3: 2 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 1 mismatches, Model chain C, native chain E1_2: 1 mismatches, Model chain C, native chain E1_3: 1 mismatches, Model chain C, native chain E1_4: 1 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain C, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain C, native chain E2_2: 5 mismatches, Model chain A, native chain E2_3: 1 mismatches, Model chain C, native chain E2_3: 5 mismatches, Model chain A, native chain E2_4: 1 mismatches, Model chain C, native chain E2_4: 5 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain A, native chain E3_4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 3 mismatches, Model chain B, native chain E1_2: 3 mismatches, Model chain B, native chain E1_3: 3 mismatches, Model chain B, native chain E1_4: 3 mismatches, Model chain A, native chain E2_1: 1 mismatches, Model chain A, native chain E2_2: 1 mismatches, Model chain A, native chain E2_3: 1 mismatches, Model chain A, native chain E2_4: 1 mismatches, Model chain A, native chain E3_1: 1 mismatches, Model chain B, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 1 mismatches, Model chain B, native chain E3_2: 5 mismatches, Model chain A, native chain E3_3: 1 mismatches, Model chain B, native chain E3_3: 5 mismatches, Model chain A, native chain E3_4: 1 mismatches, Model chain B, native chain E3_4: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain C, native chain E1: 8 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 6 mismatches, Model chain A, native chain E2: 6 mismatches, Model chain A, native chain E3: 8 mismatches, Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 1 mismatches, Model chain E, native chain E1_2: 1 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches, Model chain A, native chain E3_1: 3 mismatches, Model chain E, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 3 mismatches, Model chain E, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E3: 5 mismatches
+if they should be treated as homologous.
+
 83%|████████▎ | 259/311 [00:06<00:01, 45.42it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches, Model chain A, native chain E2_3: 7 mismatches, Model chain A, native chain E2_4: 7 mismatches, Model chain A, native chain E3_1: 8 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 8 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain A, native chain E3_3: 8 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain A, native chain E3_4: 8 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 1 mismatches, Model chain B, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1_1: 7 mismatches, Model chain C, native chain E1_1: 8 mismatches, Model chain B, native chain E1_2: 7 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain B, native chain E1_3: 7 mismatches, Model chain C, native chain E1_3: 8 mismatches, Model chain B, native chain E1_4: 7 mismatches, Model chain C, native chain E1_4: 8 mismatches, Model chain C, native chain E2_1: 4 mismatches, Model chain C, native chain E2_2: 4 mismatches, Model chain C, native chain E2_3: 4 mismatches, Model chain C, native chain E2_4: 4 mismatches, Model chain B, native chain E3_1: 4 mismatches, Model chain B, native chain E3_2: 4 mismatches, Model chain B, native chain E3_3: 4 mismatches, Model chain B, native chain E3_4: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 1 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 1 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+
 85%|████████▌ | 265/311 [00:06<00:00, 48.13it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain A, native chain E3: 6 mismatches, Model chain C, native chain E3: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3_1: 9 mismatches, Model chain B, native chain E3_2: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 5 mismatches, Model chain D, native chain E1_2: 5 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain D, native chain E2_1: 3 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain D, native chain E2_2: 3 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain A, native chain E3_2: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 7 mismatches, Model chain D, native chain E1_2: 7 mismatches, Model chain A, native chain E2: 7 mismatches, Model chain D, native chain E2: 4 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 1 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 2 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 8 mismatches, Model chain C, native chain E1_2: 8 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain C, native chain E3: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 1 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain A, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 88%|████████▊ | 274/311 [00:06<00:00, 56.59it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 9 mismatches, Model chain D, native chain E1_2: 9 mismatches, Model chain A, native chain E2: 8 mismatches, Model chain D, native chain E2: 1 mismatches, Model chain A, native chain E3: 9 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 6 mismatches, Model chain A, native chain E2_2: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 6 mismatches, Model chain C, native chain E1_2: 6 mismatches, Model chain A, native chain E2_1: 7 mismatches, Model chain A, native chain E2_2: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain C, native chain E3: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain H, native chain E2_1: 8 mismatches, Model chain H, native chain E2_2: 8 mismatches, Model chain H, native chain E3: 7 mismatches, Model chain H, native chain E5: 8 mismatches, Model chain H, native chain E6: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain G, native chain E1_1: 7 mismatches, Model chain G, native chain E1_2: 7 mismatches, Model chain G, native chain E1_3: 7 mismatches, Model chain G, native chain E1_4: 7 mismatches, Model chain G, native chain E2_1: 6 mismatches, Model chain G, native chain E2_2: 6 mismatches, Model chain G, native chain E4: 8 mismatches, Model chain G, native chain E5: 5 mismatches, Model chain G, native chain E6: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain C, native chain E1_3: 2 mismatches, Model chain C, native chain E1_4: 2 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1_1: 4 mismatches, Model chain D, native chain E1_2: 4 mismatches, Model chain D, native chain E1_3: 4 mismatches, Model chain D, native chain E1_4: 4 mismatches, Model chain A, native chain E2: 3 mismatches, Model chain A, native chain E3: 6 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E3_1: 4 mismatches, Model chain I, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+
 91%|█████████ | 283/311 [00:06<00:00, 54.32it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain J, native chain E1_1: 9 mismatches, Model chain J, native chain E1_2: 9 mismatches, Model chain J, native chain E1_3: 9 mismatches, Model chain J, native chain E1_4: 9 mismatches, Model chain J, native chain E2_1: 8 mismatches, Model chain J, native chain E2_2: 8 mismatches, Model chain J, native chain E3: 5 mismatches, Model chain J, native chain E4: 9 mismatches, Model chain J, native chain E5: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain J, native chain E2_1: 4 mismatches, Model chain J, native chain E2_2: 4 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain I, native chain E1_1: 6 mismatches, Model chain I, native chain E1_2: 6 mismatches, Model chain I, native chain E1_3: 6 mismatches, Model chain I, native chain E1_4: 6 mismatches, Model chain I, native chain E2_1: 8 mismatches, Model chain I, native chain E2_2: 8 mismatches, Model chain I, native chain E3: 7 mismatches, Model chain I, native chain E4: 5 mismatches, Model chain I, native chain E6: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain E, native chain E1_1: 2 mismatches, Model chain E, native chain E1_2: 2 mismatches, Model chain E, native chain E1_3: 2 mismatches, Model chain E, native chain E1_4: 2 mismatches, Model chain A, native chain E2_1: 2 mismatches, Model chain A, native chain E2_2: 2 mismatches, Model chain A, native chain E2_3: 2 mismatches, Model chain A, native chain E2_4: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 7 mismatches, Model chain C, native chain E1_2: 7 mismatches, Model chain C, native chain E1_3: 7 mismatches, Model chain C, native chain E1_4: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B-2, native chain E3_1: 2 mismatches, Model chain B-2, native chain E3_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C-2, native chain E2_1: 2 mismatches, Model chain C-2, native chain E2_2: 2 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain A, native chain E3_1: 7 mismatches, Model chain A, native chain E3_2: 7 mismatches
+if they should be treated as homologous.
+
 93%|█████████▎| 289/311 [00:06<00:00, 48.85it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 2 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8cs0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 1 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+Error when calculating dockq for 8cs0-assembly1 with seed 101 and sample 0
+Traceback (most recent call last):
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 243, in process_single_case
+    info = dockq(
+  File "/opt/foldbench/evaluation/eval_by_dockqv2.py", line 208, in dockq
+    info["GlobalDockQ"] = best_dockq / len(best_result)
+ZeroDivisionError: division by zero
+
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 7 mismatches, Model chain C, native chain E2: 4 mismatches, Model chain B, native chain E3_1: 3 mismatches, Model chain B, native chain E3_2: 3 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1_1: 2 mismatches, Model chain C, native chain E1_2: 2 mismatches, Model chain A, native chain E2_1: 5 mismatches, Model chain A, native chain E2_2: 5 mismatches, Model chain A, native chain E3_1: 5 mismatches, Model chain C, native chain E3_1: 4 mismatches, Model chain A, native chain E3_2: 5 mismatches, Model chain C, native chain E3_2: 4 mismatches
+if they should be treated as homologous.
+
 96%|█████████▌| 299/311 [00:07<00:00, 57.60it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 3 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain C, native chain E2: 7 mismatches, Model chain A, native chain E3: 5 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 5 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain B, native chain E1: 4 mismatches, Model chain A, native chain E2: 4 mismatches, Model chain A, native chain E3: 5 mismatches, Model chain B, native chain E3: 7 mismatches
+if they should be treated as homologous.
+
 98%|█████████▊| 306/311 [00:07<00:00, 46.45it/s]WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain D, native chain E1: 1 mismatches, Model chain D, native chain E2: 3 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain A, native chain E4: 1 mismatches
+if they should be treated as homologous.
+WARNING:root:Some chains have a limited number of sequence mismatches and are treated as non-homologous. 
+Try increasing the --allowed_mismatches for the following: Model chain C, native chain E1: 9 mismatches, Model chain C, native chain E2: 5 mismatches, Model chain A, native chain E3: 9 mismatches, Model chain A, native chain E4: 1 mismatches
+if they should be treated as homologous.
+
100%|██████████| 311/311 [00:08<00:00, 37.75it/s]
+Total results for interface_protein_dna: 300
+
  0%|          | 0/531 [00:00<?, ?it/s]
  0%|          | 1/531 [00:01<17:31,  1.98s/it]
  1%|          | 3/531 [00:02<05:22,  1.63it/s]
  1%|          | 5/531 [00:02<02:59,  2.93it/s]
  2%|▏         | 8/531 [00:02<01:37,  5.34it/s]
  2%|▏         | 11/531 [00:02<01:08,  7.54it/s]
  3%|▎         | 16/531 [00:02<00:40, 12.85it/s]
  4%|▍         | 20/531 [00:03<00:39, 13.04it/s]
  4%|▍         | 23/531 [00:03<00:49, 10.22it/s]
  5%|▍         | 25/531 [00:03<00:45, 11.13it/s]
  5%|▌         | 27/531 [00:03<00:41, 12.00it/s]
  5%|▌         | 29/531 [00:03<00:38, 12.96it/s]
  6%|▌         | 31/531 [00:04<00:47, 10.53it/s]
  6%|▌         | 33/531 [00:04<00:47, 10.52it/s]
  7%|▋         | 35/531 [00:04<00:41, 11.98it/s]
  7%|▋         | 37/531 [00:04<00:55,  8.93it/s]
  7%|▋         | 39/531 [00:05<00:57,  8.57it/s]
  8%|▊         | 41/531 [00:05<00:48, 10.05it/s]
  8%|▊         | 43/531 [00:05<01:03,  7.68it/s]
  8%|▊         | 45/531 [00:05<01:03,  7.71it/s]
  9%|▉         | 47/531 [00:06<00:53,  9.03it/s]
  9%|▉         | 50/531 [00:06<00:47, 10.21it/s]
 10%|▉         | 52/531 [00:06<00:42, 11.16it/s]
 10%|█         | 55/531 [00:06<00:33, 14.37it/s]
 11%|█         | 57/531 [00:07<01:03,  7.42it/s]
 11%|█         | 59/531 [00:07<01:00,  7.78it/s]
 11%|█▏        | 61/531 [00:07<00:56,  8.25it/s]
 12%|█▏        | 64/531 [00:07<00:42, 10.90it/s]
 13%|█▎        | 69/531 [00:07<00:27, 16.51it/s]
 14%|█▎        | 72/531 [00:08<00:29, 15.40it/s]
 15%|█▍        | 77/531 [00:08<00:25, 17.95it/s]
 15%|█▌        | 80/531 [00:08<00:40, 11.12it/s]
 15%|█▌        | 82/531 [00:09<00:37, 12.09it/s]
 16%|█▌        | 84/531 [00:09<00:45,  9.77it/s]
 16%|█▋        | 87/531 [00:09<00:38, 11.62it/s]
 17%|█▋        | 89/531 [00:09<00:39, 11.25it/s]
 17%|█▋        | 91/531 [00:09<00:36, 12.20it/s]
 18%|█▊        | 94/531 [00:09<00:28, 15.36it/s]
 18%|█▊        | 96/531 [00:10<00:41, 10.36it/s]
 18%|█▊        | 98/531 [00:10<00:38, 11.25it/s]
 19%|█▉        | 102/531 [00:10<00:26, 16.05it/s]
 20%|█▉        | 105/531 [00:10<00:35, 12.07it/s]
 20%|██        | 107/531 [00:11<00:53,  7.97it/s]
 21%|██        | 110/531 [00:11<00:47,  8.78it/s]
 21%|██        | 112/531 [00:11<00:41, 10.09it/s]
 22%|██▏       | 116/531 [00:11<00:29, 14.05it/s]
 22%|██▏       | 119/531 [00:12<00:45,  9.12it/s]
 23%|██▎       | 121/531 [00:12<00:40, 10.17it/s]
 23%|██▎       | 124/531 [00:13<00:47,  8.56it/s]
 24%|██▎       | 126/531 [00:13<00:41,  9.65it/s]
 24%|██▍       | 128/531 [00:13<00:36, 10.91it/s]
 25%|██▍       | 132/531 [00:13<00:29, 13.51it/s]
 25%|██▌       | 134/531 [00:13<00:35, 11.31it/s]
 26%|██▌       | 136/531 [00:14<00:44,  8.92it/s]
 26%|██▌       | 138/531 [00:14<00:41,  9.56it/s]
 27%|██▋       | 141/531 [00:14<00:32, 12.10it/s]
 27%|██▋       | 143/531 [00:14<00:39,  9.94it/s]
 27%|██▋       | 145/531 [00:15<00:45,  8.55it/s]
 28%|██▊       | 147/531 [00:15<00:42,  9.04it/s]
 28%|██▊       | 149/531 [00:15<00:38,  9.87it/s]
 29%|██▉       | 154/531 [00:15<00:24, 15.25it/s]
 29%|██▉       | 156/531 [00:16<00:37,  9.88it/s]
 30%|██▉       | 158/531 [00:16<00:37,  9.84it/s]
 30%|███       | 161/531 [00:16<00:29, 12.33it/s]
 31%|███       | 163/531 [00:16<00:43,  8.44it/s]
 31%|███       | 165/531 [00:17<00:41,  8.89it/s]
 31%|███▏      | 167/531 [00:17<00:37,  9.61it/s]
 32%|███▏      | 170/531 [00:17<00:29, 12.38it/s]
 33%|███▎      | 173/531 [00:17<00:25, 13.87it/s]
 33%|███▎      | 175/531 [00:17<00:28, 12.35it/s]
 33%|███▎      | 177/531 [00:17<00:27, 13.02it/s]
 34%|███▎      | 179/531 [00:18<00:38,  9.07it/s]
 34%|███▍      | 181/531 [00:18<00:49,  7.09it/s]
 34%|███▍      | 182/531 [00:18<00:47,  7.29it/s]
 34%|███▍      | 183/531 [00:19<00:49,  6.99it/s]
 35%|███▍      | 185/531 [00:19<00:44,  7.85it/s]
 36%|███▌      | 191/531 [00:19<00:20, 16.22it/s]
 37%|███▋      | 195/531 [00:19<00:18, 18.50it/s]
 37%|███▋      | 198/531 [00:19<00:17, 18.68it/s]
 38%|███▊      | 201/531 [00:19<00:20, 15.74it/s]
 38%|███▊      | 203/531 [00:20<00:30, 10.82it/s]
 39%|███▊      | 205/531 [00:20<00:41,  7.94it/s]
 39%|███▉      | 207/531 [00:20<00:38,  8.43it/s]
 40%|███▉      | 210/531 [00:21<00:31, 10.28it/s]
 40%|████      | 214/531 [00:21<00:27, 11.57it/s]
 41%|████      | 216/531 [00:21<00:25, 12.36it/s]
 41%|████      | 219/531 [00:21<00:22, 14.06it/s]
 42%|████▏     | 222/531 [00:21<00:19, 15.75it/s]
 42%|████▏     | 224/531 [00:22<00:28, 10.86it/s]
 43%|████▎     | 227/531 [00:22<00:22, 13.31it/s]
 43%|████▎     | 229/531 [00:22<00:25, 11.74it/s]
 44%|████▎     | 231/531 [00:22<00:23, 12.70it/s]
 44%|████▍     | 233/531 [00:23<00:30,  9.68it/s]
 44%|████▍     | 235/531 [00:23<00:29,  9.99it/s]
 45%|████▍     | 237/531 [00:23<00:28, 10.45it/s]
 46%|████▌     | 242/531 [00:23<00:18, 15.41it/s]
 46%|████▌     | 244/531 [00:24<00:29,  9.79it/s]
 47%|████▋     | 248/531 [00:24<00:23, 12.20it/s]
 47%|████▋     | 252/531 [00:24<00:24, 11.40it/s]
 48%|████▊     | 255/531 [00:24<00:23, 11.64it/s]
 48%|████▊     | 257/531 [00:24<00:22, 12.28it/s]
 49%|████▉     | 259/531 [00:25<00:34,  7.85it/s]
 50%|████▉     | 264/531 [00:25<00:23, 11.45it/s]
 50%|█████     | 266/531 [00:26<00:28,  9.44it/s]
 50%|█████     | 268/531 [00:26<00:24, 10.61it/s]
 51%|█████     | 271/531 [00:26<00:20, 12.91it/s]
 51%|█████▏    | 273/531 [00:26<00:24, 10.68it/s]
 52%|█████▏    | 275/531 [00:27<00:31,  8.13it/s]
 52%|█████▏    | 278/531 [00:27<00:27,  9.19it/s]
 53%|█████▎    | 280/531 [00:27<00:30,  8.30it/s]
 53%|█████▎    | 283/531 [00:27<00:24, 10.04it/s]
 54%|█████▎    | 285/531 [00:27<00:22, 10.85it/s]
 54%|█████▍    | 287/531 [00:28<00:31,  7.78it/s]
 55%|█████▍    | 290/531 [00:28<00:22, 10.56it/s]
 55%|█████▍    | 292/531 [00:28<00:27,  8.68it/s]
 55%|█████▌    | 294/531 [00:28<00:25,  9.40it/s]
 56%|█████▌    | 297/531 [00:29<00:24,  9.60it/s]
 56%|█████▋    | 299/531 [00:29<00:23,  9.85it/s]
 57%|█████▋    | 302/531 [00:29<00:18, 12.56it/s]
 57%|█████▋    | 304/531 [00:29<00:19, 11.74it/s]
 58%|█████▊    | 306/531 [00:29<00:18, 11.87it/s]
 58%|█████▊    | 308/531 [00:30<00:28,  7.78it/s]
 58%|█████▊    | 310/531 [00:30<00:29,  7.59it/s]
 59%|█████▉    | 314/531 [00:30<00:20, 10.62it/s]
 60%|█████▉    | 316/531 [00:31<00:18, 11.56it/s]
 60%|██████    | 319/531 [00:31<00:14, 14.42it/s]
 61%|██████    | 324/531 [00:31<00:15, 13.49it/s]
 61%|██████▏   | 326/531 [00:31<00:14, 14.05it/s]
 62%|██████▏   | 328/531 [00:31<00:16, 12.38it/s]
 62%|██████▏   | 330/531 [00:32<00:15, 13.18it/s]
 63%|██████▎   | 333/531 [00:32<00:17, 11.18it/s]
 63%|██████▎   | 335/531 [00:32<00:16, 11.60it/s]
 63%|██████▎   | 337/531 [00:33<00:26,  7.24it/s]
 64%|██████▍   | 340/531 [00:33<00:20,  9.45it/s]
 65%|██████▍   | 343/531 [00:33<00:16, 11.39it/s]
 65%|██████▍   | 345/531 [00:33<00:20,  9.17it/s]
 66%|██████▌   | 348/531 [00:34<00:22,  8.21it/s]
 66%|██████▌   | 350/531 [00:34<00:22,  8.02it/s]
 66%|██████▋   | 352/531 [00:34<00:26,  6.84it/s]
 67%|██████▋   | 356/531 [00:35<00:17,  9.86it/s]
 68%|██████▊   | 360/531 [00:35<00:15, 11.10it/s]
 68%|██████▊   | 363/531 [00:35<00:12, 13.17it/s]
 69%|██████▊   | 365/531 [00:35<00:16,  9.94it/s]
 69%|██████▉   | 367/531 [00:36<00:20,  8.06it/s]
 69%|██████▉   | 369/531 [00:36<00:22,  7.09it/s]
 70%|██████▉   | 370/531 [00:36<00:22,  7.19it/s]
 70%|███████   | 372/531 [00:36<00:20,  7.77it/s]
 70%|███████   | 373/531 [00:37<00:19,  7.93it/s]
 71%|███████   | 376/531 [00:37<00:13, 11.08it/s]
 71%|███████▏  | 379/531 [00:37<00:10, 13.83it/s]
 72%|███████▏  | 381/531 [00:37<00:15,  9.38it/s]
 72%|███████▏  | 383/531 [00:38<00:20,  7.27it/s]
 73%|███████▎  | 386/531 [00:38<00:14,  9.83it/s]
 73%|███████▎  | 388/531 [00:38<00:17,  8.10it/s]
 73%|███████▎  | 390/531 [00:38<00:15,  9.35it/s]
 74%|███████▍  | 392/531 [00:38<00:14,  9.73it/s]
 74%|███████▍  | 395/531 [00:39<00:10, 12.96it/s]
 75%|███████▍  | 397/531 [00:39<00:09, 13.59it/s]
 75%|███████▌  | 399/531 [00:39<00:10, 12.81it/s]
 76%|███████▌  | 401/531 [00:39<00:10, 12.04it/s]
 76%|███████▌  | 403/531 [00:40<00:16,  7.64it/s]
 76%|███████▋  | 405/531 [00:40<00:14,  8.41it/s]
 77%|███████▋  | 407/531 [00:40<00:13,  9.41it/s]
 77%|███████▋  | 409/531 [00:40<00:11, 10.53it/s]
 77%|███████▋  | 411/531 [00:40<00:10, 11.77it/s]
 78%|███████▊  | 413/531 [00:41<00:14,  8.42it/s]
 78%|███████▊  | 415/531 [00:41<00:13,  8.69it/s]
 79%|███████▊  | 417/531 [00:41<00:16,  7.12it/s]
 79%|███████▉  | 419/531 [00:41<00:12,  8.77it/s]
 79%|███████▉  | 422/531 [00:41<00:09, 11.86it/s]
 80%|███████▉  | 424/531 [00:42<00:09, 11.20it/s]
 80%|████████  | 426/531 [00:42<00:10, 10.41it/s]
 81%|████████  | 428/531 [00:42<00:08, 11.58it/s]
 81%|████████  | 430/531 [00:42<00:12,  8.10it/s]
 81%|████████▏ | 432/531 [00:42<00:10,  9.66it/s]
 82%|████████▏ | 435/531 [00:43<00:07, 12.55it/s]
 82%|████████▏ | 437/531 [00:43<00:11,  8.45it/s]
 83%|████████▎ | 439/531 [00:43<00:11,  8.27it/s]
 83%|████████▎ | 441/531 [00:43<00:09,  9.48it/s]
 83%|████████▎ | 443/531 [00:44<00:09,  9.42it/s]
 84%|████████▍ | 446/531 [00:44<00:07, 11.44it/s]
 85%|████████▍ | 449/531 [00:44<00:05, 13.90it/s]
 85%|████████▍ | 451/531 [00:44<00:07, 10.67it/s]
 85%|████████▌ | 453/531 [00:44<00:06, 11.95it/s]
 86%|████████▌ | 455/531 [00:45<00:08,  8.95it/s]
 86%|████████▌ | 457/531 [00:45<00:08,  8.25it/s]
 86%|████████▋ | 459/531 [00:45<00:09,  7.43it/s]
 87%|████████▋ | 460/531 [00:46<00:10,  7.01it/s]
 87%|████████▋ | 461/531 [00:46<00:11,  6.03it/s]
 87%|████████▋ | 463/531 [00:46<00:08,  7.87it/s]
 87%|████████▋ | 464/531 [00:46<00:08,  8.22it/s]
 88%|████████▊ | 465/531 [00:46<00:07,  8.53it/s]
 88%|████████▊ | 466/531 [00:46<00:08,  7.58it/s]
 88%|████████▊ | 468/531 [00:47<00:10,  5.78it/s]
 89%|████████▊ | 470/531 [00:47<00:07,  7.65it/s]
 89%|████████▉ | 472/531 [00:47<00:06,  9.16it/s]
 89%|████████▉ | 474/531 [00:47<00:05,  9.53it/s]
 90%|████████▉ | 477/531 [00:47<00:04, 13.02it/s]
 90%|█████████ | 479/531 [00:48<00:04, 12.85it/s]
 91%|█████████ | 483/531 [00:48<00:03, 14.77it/s]
 91%|█████████▏| 485/531 [00:48<00:04, 11.18it/s]
 92%|█████████▏| 487/531 [00:48<00:03, 11.32it/s]
 92%|█████████▏| 489/531 [00:49<00:04,  9.15it/s]
 93%|█████████▎| 492/531 [00:49<00:03, 12.25it/s]
 93%|█████████▎| 494/531 [00:49<00:03,  9.97it/s]
 93%|█████████▎| 496/531 [00:49<00:03, 10.56it/s]
 94%|█████████▍| 498/531 [00:49<00:03,  9.42it/s]
 94%|█████████▍| 500/531 [00:50<00:04,  6.60it/s]
 95%|█████████▍| 502/531 [00:50<00:03,  7.89it/s]
 95%|█████████▍| 504/531 [00:50<00:04,  6.60it/s]
 95%|█████████▌| 505/531 [00:51<00:03,  6.75it/s]
 95%|█████████▌| 506/531 [00:51<00:07,  3.47it/s]
 95%|█████████▌| 507/531 [00:52<00:09,  2.42it/s]
 96%|█████████▌| 508/531 [00:52<00:08,  2.79it/s]
 96%|█████████▌| 509/531 [00:53<00:07,  2.92it/s]
 96%|█████████▌| 510/531 [00:53<00:06,  3.14it/s]
 96%|█████████▌| 511/531 [00:54<00:07,  2.60it/s]
 96%|█████████▋| 512/531 [00:54<00:08,  2.13it/s]
 97%|█████████▋| 513/531 [00:56<00:13,  1.37it/s]
 97%|█████████▋| 514/531 [00:57<00:15,  1.12it/s]
 97%|█████████▋| 515/531 [00:57<00:11,  1.40it/s]
 97%|█████████▋| 516/531 [00:59<00:13,  1.08it/s]
 97%|█████████▋| 517/531 [00:59<00:09,  1.44it/s]
 98%|█████████▊| 518/531 [01:00<00:09,  1.37it/s]
 98%|█████████▊| 519/531 [01:02<00:13,  1.12s/it]
 98%|█████████▊| 520/531 [01:02<00:09,  1.14it/s]
 98%|█████████▊| 521/531 [01:03<00:08,  1.17it/s]
 98%|█████████▊| 522/531 [01:04<00:09,  1.05s/it]
 98%|█████████▊| 523/531 [01:06<00:09,  1.13s/it]
 99%|█████████▊| 524/531 [01:06<00:07,  1.04s/it]
 99%|█████████▉| 525/531 [01:08<00:06,  1.09s/it]
 99%|█████████▉| 526/531 [01:08<00:04,  1.02it/s]
 99%|█████████▉| 527/531 [01:12<00:07,  1.87s/it]
 99%|█████████▉| 528/531 [01:28<00:18,  6.14s/it]
100%|█████████▉| 529/531 [01:45<00:18,  9.17s/it]
100%|█████████▉| 530/531 [01:49<00:07,  7.66s/it]
100%|██████████| 531/531 [01:50<00:00,  5.80s/it]
100%|██████████| 531/531 [01:50<00:00,  4.79it/s]
+
  0%|          | 0/531 [00:00<?, ?it/s]
100%|██████████| 531/531 [00:00<00:00, 12170.89it/s]
+Total results for interface_protein_ligand: 531
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/logs/inference/verifier.log b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/logs/inference/verifier.log
new file mode 100644
index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/report.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/report.json
new file mode 100644
index 0000000000000000000000000000000000000000..aabe1687a23323cef1fa94c3795988fb1cad11af
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/report.json
@@ -0,0 +1,69 @@
+{
+  "accepted_predictions": 1424,
+  "benchmark_visible_during_development": true,
+  "evaluation_mode": "model_replay",
+  "expected_predictions": 1448,
+  "invalid_predictions": [],
+  "label_isolated_sandbox": false,
+  "missing_or_invalid_predictions": 24,
+  "requests": 1448,
+  "reward": 0.0810753272808973,
+  "reward_definition": "unweighted mean of the per-track scores in reward.json",
+  "suite_manifest_sha256": "15ca32c737d8548f62cc7e6a237151ae6c15a079b6910e674c279f6d15bb6104",
+  "tracks": {
+    "interface_antibody_antigen": {
+      "finite_targets": 147,
+      "missing_or_invalid": 8,
+      "score": 0.0,
+      "targets": 155
+    },
+    "interface_protein_dna": {
+      "finite_targets": 300,
+      "missing_or_invalid": 11,
+      "score": 0.003215434083601286,
+      "targets": 311
+    },
+    "interface_protein_ligand": {
+      "finite_targets": 485,
+      "missing_or_invalid": 63,
+      "score": 0.0,
+      "targets": 548
+    },
+    "interface_protein_peptide": {
+      "finite_targets": 35,
+      "missing_or_invalid": 6,
+      "score": 0.04878048780487805,
+      "targets": 41
+    },
+    "interface_protein_protein": {
+      "finite_targets": 232,
+      "missing_or_invalid": 29,
+      "score": 0.03065134099616858,
+      "targets": 261
+    },
+    "interface_protein_rna": {
+      "finite_targets": 51,
+      "missing_or_invalid": 0,
+      "score": 0.0196078431372549,
+      "targets": 51
+    },
+    "monomer_dna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.08616666666666667,
+      "targets": 12
+    },
+    "monomer_protein": {
+      "finite_targets": 322,
+      "missing_or_invalid": 2,
+      "score": 0.42758950617283936,
+      "targets": 324
+    },
+    "monomer_rna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.11366666666666665,
+      "targets": 12
+    }
+  }
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/reward.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/reward.json
new file mode 100644
index 0000000000000000000000000000000000000000..b83acfe074ad673c02fd7e8b8fc0090b50a65121
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/reward.json
@@ -0,0 +1,12 @@
+{
+  "interface_antibody_antigen": 0.0,
+  "interface_protein_dna": 0.003215434083601286,
+  "interface_protein_ligand": 0.0,
+  "interface_protein_peptide": 0.04878048780487805,
+  "interface_protein_protein": 0.03065134099616858,
+  "interface_protein_rna": 0.0196078431372549,
+  "monomer_dna": 0.08616666666666667,
+  "monomer_protein": 0.42758950617283936,
+  "monomer_rna": 0.11366666666666665,
+  "reward": 0.0810753272808973
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/report.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/report.json
new file mode 100644
index 0000000000000000000000000000000000000000..2b09b240db260fc9be5342fd80edd3a948290727
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/report.json
@@ -0,0 +1,69 @@
+{
+  "accepted_predictions": 1424,
+  "benchmark_visible_during_development": true,
+  "evaluation_mode": "model_replay",
+  "expected_predictions": 1448,
+  "invalid_predictions": [],
+  "label_isolated_sandbox": false,
+  "missing_or_invalid_predictions": 24,
+  "requests": 1448,
+  "reward": 0.08100778250039248,
+  "reward_definition": "unweighted mean of the per-track scores in reward.json",
+  "suite_manifest_sha256": "15ca32c737d8548f62cc7e6a237151ae6c15a079b6910e674c279f6d15bb6104",
+  "tracks": {
+    "interface_antibody_antigen": {
+      "finite_targets": 147,
+      "missing_or_invalid": 8,
+      "score": 0.0,
+      "targets": 155
+    },
+    "interface_protein_dna": {
+      "finite_targets": 300,
+      "missing_or_invalid": 11,
+      "score": 0.00964630225080386,
+      "targets": 311
+    },
+    "interface_protein_ligand": {
+      "finite_targets": 484,
+      "missing_or_invalid": 64,
+      "score": 0.0,
+      "targets": 548
+    },
+    "interface_protein_peptide": {
+      "finite_targets": 35,
+      "missing_or_invalid": 6,
+      "score": 0.04878048780487805,
+      "targets": 41
+    },
+    "interface_protein_protein": {
+      "finite_targets": 233,
+      "missing_or_invalid": 28,
+      "score": 0.034482758620689655,
+      "targets": 261
+    },
+    "interface_protein_rna": {
+      "finite_targets": 51,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 51
+    },
+    "monomer_dna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.08766666666666666,
+      "targets": 12
+    },
+    "monomer_protein": {
+      "finite_targets": 322,
+      "missing_or_invalid": 2,
+      "score": 0.42907716049382727,
+      "targets": 324
+    },
+    "monomer_rna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.11941666666666667,
+      "targets": 12
+    }
+  }
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/reward.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/reward.json
new file mode 100644
index 0000000000000000000000000000000000000000..9a9fdf1c7a66d08ff2615eda5753545f2b05ca97
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/reward.json
@@ -0,0 +1,12 @@
+{
+  "interface_antibody_antigen": 0.0,
+  "interface_protein_dna": 0.00964630225080386,
+  "interface_protein_ligand": 0.0,
+  "interface_protein_peptide": 0.04878048780487805,
+  "interface_protein_protein": 0.034482758620689655,
+  "interface_protein_rna": 0.0,
+  "monomer_dna": 0.08766666666666666,
+  "monomer_protein": 0.42907716049382727,
+  "monomer_rna": 0.11941666666666667,
+  "reward": 0.08100778250039248
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/report.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/report.json
new file mode 100644
index 0000000000000000000000000000000000000000..169488138233b47b8b206e15c3139abd6acddacb
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/report.json
@@ -0,0 +1,69 @@
+{
+  "accepted_predictions": 1424,
+  "benchmark_visible_during_development": true,
+  "evaluation_mode": "model_replay",
+  "expected_predictions": 1448,
+  "invalid_predictions": [],
+  "label_isolated_sandbox": false,
+  "missing_or_invalid_predictions": 24,
+  "requests": 1448,
+  "reward": 0.09544879758955575,
+  "reward_definition": "unweighted mean of the per-track scores in reward.json",
+  "suite_manifest_sha256": "15ca32c737d8548f62cc7e6a237151ae6c15a079b6910e674c279f6d15bb6104",
+  "tracks": {
+    "interface_antibody_antigen": {
+      "finite_targets": 147,
+      "missing_or_invalid": 8,
+      "score": 0.0,
+      "targets": 155
+    },
+    "interface_protein_dna": {
+      "finite_targets": 300,
+      "missing_or_invalid": 11,
+      "score": 0.00964630225080386,
+      "targets": 311
+    },
+    "interface_protein_ligand": {
+      "finite_targets": 484,
+      "missing_or_invalid": 64,
+      "score": 0.0,
+      "targets": 548
+    },
+    "interface_protein_peptide": {
+      "finite_targets": 35,
+      "missing_or_invalid": 6,
+      "score": 0.04878048780487805,
+      "targets": 41
+    },
+    "interface_protein_protein": {
+      "finite_targets": 233,
+      "missing_or_invalid": 28,
+      "score": 0.034482758620689655,
+      "targets": 261
+    },
+    "interface_protein_rna": {
+      "finite_targets": 51,
+      "missing_or_invalid": 0,
+      "score": 0.0,
+      "targets": 51
+    },
+    "monomer_dna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.12541666666666665,
+      "targets": 12
+    },
+    "monomer_protein": {
+      "finite_targets": 322,
+      "missing_or_invalid": 2,
+      "score": 0.4922129629629635,
+      "targets": 324
+    },
+    "monomer_rna": {
+      "finite_targets": 12,
+      "missing_or_invalid": 0,
+      "score": 0.1485,
+      "targets": 12
+    }
+  }
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/reward.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/reward.json
new file mode 100644
index 0000000000000000000000000000000000000000..676a2c35372bcc31a796d9eece663e4e46b251ca
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/reward.json
@@ -0,0 +1,12 @@
+{
+  "interface_antibody_antigen": 0.0,
+  "interface_protein_dna": 0.00964630225080386,
+  "interface_protein_ligand": 0.0,
+  "interface_protein_peptide": 0.04878048780487805,
+  "interface_protein_protein": 0.034482758620689655,
+  "interface_protein_rna": 0.0,
+  "monomer_dna": 0.12541666666666665,
+  "monomer_protein": 0.4922129629629635,
+  "monomer_rna": 0.1485,
+  "reward": 0.09544879758955575
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/index.json b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/index.json
new file mode 100644
index 0000000000000000000000000000000000000000..5306f4c36ea5c79ff286a1be469a911ad984bd8b
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/index.json
@@ -0,0 +1,7747 @@
+{
+  "caveats": [
+    "Interrupted/resumed research with preserved charged time; not an uninterrupted trial.",
+    "Adapted Beaker execution; exact original Docker isolation and memory ceilings are not claimed.",
+    "Post-budget publication is separate from the original 48-hour history.",
+    "Research used one H100, 22 CPUs, 224 GiB requested RAM instead of the pinned eight-GPU task configuration."
+  ],
+  "distinct_candidates": 18,
+  "evaluations": {
+    "S001": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 49,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S001/reward.json",
+          "sha256": "656a1cea497008ee00ae4e5731a58ea98740cbc3d3fa9c4873fcc60471aaca72"
+        },
+        {
+          "bytes": 110,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S001/report.json",
+          "sha256": "dfd9d391ee60ab7ae2ec90477f24e0b5069459f465e6d1f7a0324ae6922e1355"
+        },
+        {
+          "bytes": 62,
+          "original_sha256": "326a95629cc16613940f8d9993e10fa59381edb1576707b5127194577c8e15fe",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S001/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "326a95629cc16613940f8d9993e10fa59381edb1576707b5127194577c8e15fe"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 17027,
+            "path": "reproduction/files/eb/eb1ff7b3952c7ec412e6a4a0dd8939358a4a724f2ecb39309855a561ec86b53b/native_verifier.py",
+            "sha256": "eb1ff7b3952c7ec412e6a4a0dd8939358a4a724f2ecb39309855a561ec86b53b"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37058,
+            "path": "reproduction/files/ab/abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c/runtime.py",
+            "sha256": "abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11320,
+            "path": "reproduction/files/a1/a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7/task_profiles.py",
+            "sha256": "a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7"
+          }
+        }
+      ]
+    },
+    "S002": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 331,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/reward.json",
+          "sha256": "fbbef71cd2e55ec5c00e77a2c556113ae02a143cf7a5bd544bf6344c0c09ab4a"
+        },
+        {
+          "bytes": 1756,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/report.json",
+          "sha256": "2d7b79dbcf3b25739f95753277025fb5257f06ad6d0c1a1320bd8b7eecd825d8"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 231821,
+          "original_sha256": "5d5de17c2c77a767148419491e470bc50372423ef40835778ea0b890755d2012",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S002/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "5d5de17c2c77a767148419491e470bc50372423ef40835778ea0b890755d2012"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 17027,
+            "path": "reproduction/files/eb/eb1ff7b3952c7ec412e6a4a0dd8939358a4a724f2ecb39309855a561ec86b53b/native_verifier.py",
+            "sha256": "eb1ff7b3952c7ec412e6a4a0dd8939358a4a724f2ecb39309855a561ec86b53b"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37058,
+            "path": "reproduction/files/ab/abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c/runtime.py",
+            "sha256": "abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11320,
+            "path": "reproduction/files/a1/a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7/task_profiles.py",
+            "sha256": "a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7"
+          }
+        }
+      ]
+    },
+    "S003": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 331,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S003/reward.json",
+          "sha256": "fbbef71cd2e55ec5c00e77a2c556113ae02a143cf7a5bd544bf6344c0c09ab4a"
+        },
+        {
+          "bytes": 1756,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S003/report.json",
+          "sha256": "2d7b79dbcf3b25739f95753277025fb5257f06ad6d0c1a1320bd8b7eecd825d8"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S003/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 230185,
+          "original_sha256": "90749beb5b7994ae34abd038580f0b6df53237ad36e6d6b140e6d910044dde2f",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S003/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "90749beb5b7994ae34abd038580f0b6df53237ad36e6d6b140e6d910044dde2f"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 19494,
+            "path": "reproduction/files/db/dbdc5f86407baa57bc7e97c5729954b5da93de1f8c04ccacd726bddbe7c42a3b/native_verifier.py",
+            "sha256": "dbdc5f86407baa57bc7e97c5729954b5da93de1f8c04ccacd726bddbe7c42a3b"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37058,
+            "path": "reproduction/files/ab/abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c/runtime.py",
+            "sha256": "abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11320,
+            "path": "reproduction/files/a1/a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7/task_profiles.py",
+            "sha256": "a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7"
+          }
+        }
+      ]
+    },
+    "S004": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false.",
+          "After allocation preemption, reuse unchanged native predictions and certified complete track CSVs from one replay. No partial detail JSON is reused.",
+          "Resume only unfinished native FoldBench tracks and execute the unchanged native reward/report statements. This is adapted orchestration, not an uninterrupted official run.",
+          "Charge the source job from Beaker start through finalization, plus any prior continuation charge. Repeated staging and interrupted partial scoring reduce the remaining original 24-hour verifier budget.",
+          "After allocation preemption, reuse unchanged native predictions and certified complete track CSVs from one replay. No partial detail JSON is reused.",
+          "Resume only unfinished native FoldBench tracks and execute the unchanged native reward/report statements. This is adapted orchestration, not an uninterrupted official run.",
+          "Charge the source job from Beaker start through finalization, plus any prior continuation charge. Repeated staging and interrupted partial scoring reduce the remaining original 24-hour verifier budget.",
+          "Remaining native grading uses the validated CPU-only continuation, retaining 64 CPUs, 256 GiB RAM and the remaining original verifier clock; Jupiter reserves three slots.",
+          "CPU-only native grading continuation, validated against the prior native probe; frozen predictions, CPU/RAM and remaining deadline unchanged."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 331,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S004/reward.json",
+          "sha256": "fbbef71cd2e55ec5c00e77a2c556113ae02a143cf7a5bd544bf6344c0c09ab4a"
+        },
+        {
+          "bytes": 1756,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S004/report.json",
+          "sha256": "0335f8aaca04e65970a5ed63f1e4641e00b2811dca982ab83a41d568ee974148"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S004/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 180017,
+          "original_sha256": "0ae788526c0e1441982f84839726e534273d24a48bc1b4d92086970bdf23137c",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S004/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "0ae788526c0e1441982f84839726e534273d24a48bc1b4d92086970bdf23137c"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "folding_continuation.py",
+          "stored": {
+            "bytes": 11582,
+            "path": "reproduction/files/d2/d2b43f5f0fb23f2cce233c2e9167d4abe1aead041d1bef617e5fbcbaf6ebc0c9/folding_continuation.py",
+            "sha256": "d2b43f5f0fb23f2cce233c2e9167d4abe1aead041d1bef617e5fbcbaf6ebc0c9"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 19494,
+            "path": "reproduction/files/db/dbdc5f86407baa57bc7e97c5729954b5da93de1f8c04ccacd726bddbe7c42a3b/native_verifier.py",
+            "sha256": "dbdc5f86407baa57bc7e97c5729954b5da93de1f8c04ccacd726bddbe7c42a3b"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37058,
+            "path": "reproduction/files/ab/abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c/runtime.py",
+            "sha256": "abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11320,
+            "path": "reproduction/files/a1/a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7/task_profiles.py",
+            "sha256": "a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7"
+          }
+        }
+      ]
+    },
+    "S006": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 397,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S006/reward.json",
+          "sha256": "54f9096a5e394340907fcdbca4811e30f57b496f6c6aa0bb66b3c71bb6428c81"
+        },
+        {
+          "bytes": 1822,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S006/report.json",
+          "sha256": "cea90b1d75e0d4eb150f2a002243817ea91c4164efe8ff721dfea1f41d810400"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S006/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 203148,
+          "original_sha256": "f6be0a617de6499ba314887d8d27d58ccb652fae45f1f4c42495fd875b73114f",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S006/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "f6be0a617de6499ba314887d8d27d58ccb652fae45f1f4c42495fd875b73114f"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S009": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 384,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/reward.json",
+          "sha256": "41e5da09f319fb67f6de990652c770a9f86d3bcdaefbe9f6193081641b8db0ad"
+        },
+        {
+          "bytes": 1809,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/report.json",
+          "sha256": "6b73b4fe96194746f6b68e78eee88d055240b55f958ce07addb18dbc927a41df"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 201283,
+          "original_sha256": "88db6120d1f7145ba4e960271bfa3b7e2d9abc4f85224e6638659ccc6a9a009b",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S009/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "88db6120d1f7145ba4e960271bfa3b7e2d9abc4f85224e6638659ccc6a9a009b"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S011": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 429,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S011/reward.json",
+          "sha256": "c66dca208013fc7112432e6d95fab85ab392e546b69b687a66a5ec3efa54e7c2"
+        },
+        {
+          "bytes": 1854,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S011/report.json",
+          "sha256": "425604d6246d7faba03c90bfd5b9f07b8ae6c28aa68544b0d733e7a6bdb9040b"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S011/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 199923,
+          "original_sha256": "07d4db8103f24130e48ed350c4bd4cbbece659fa4fc144c4fe3a5c87ecd31d74",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S011/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "07d4db8103f24130e48ed350c4bd4cbbece659fa4fc144c4fe3a5c87ecd31d74"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S012": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false.",
+          "After ENOSPC during incomplete inference, replay the unchanged submission/native verifier; preserve all partial outputs and charge the entire failed job against the original 24-hour budget. No incomplete predictions are accepted and no verifier time is added."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 81526,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 413,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/reward.json",
+          "sha256": "30d762dde1917d5ff7f818314a8dd0d4df051e5f48b1f46d2a0969017d595e09"
+        },
+        {
+          "bytes": 1838,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/report.json",
+          "sha256": "bc5b8a9fcd6b83c32b6bae0d99b28d174906811ad86f0ae31b9cff7872b23de2"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 200029,
+          "original_sha256": "6a77ecdca18acb9ead9becea689e53ea53a993c6f0ade919094ddbd2620c4f66",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S012/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "6a77ecdca18acb9ead9becea689e53ea53a993c6f0ade919094ddbd2620c4f66"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S014": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 414,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S014/reward.json",
+          "sha256": "7b386201eb23f11e92ef4db993bf156b7ba120c487463a4f5b4ec37e875e24da"
+        },
+        {
+          "bytes": 1839,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S014/report.json",
+          "sha256": "c320a8c3f080c4872b005213db199a95cce4e9ceeaaaee1876a39f6b6dae1b76"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S014/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 199617,
+          "original_sha256": "c25df158c17f6c3272cca12923c4ee19242f1ec3f5eff2a78dfbed921d678096",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S014/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "c25df158c17f6c3272cca12923c4ee19242f1ec3f5eff2a78dfbed921d678096"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S016": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 402,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S016/reward.json",
+          "sha256": "e370671f704b3c2622d54bebcd852befbf477b6dabb866f839cabfb6ec38eb03"
+        },
+        {
+          "bytes": 1827,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S016/report.json",
+          "sha256": "76051884b7a1b950492968669ffa63c27634a0c0d35992a67593d392d587e69d"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S016/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 200902,
+          "original_sha256": "99389f7a0ace10d9a5b024fc7ecf8bfb6ca0acf7f64c72c40495d4997faa4ebe",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S016/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "99389f7a0ace10d9a5b024fc7ecf8bfb6ca0acf7f64c72c40495d4997faa4ebe"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S017": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 411,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/reward.json",
+          "sha256": "d51037e1071cd6e475256bd0961431ccfb26fd36074291c1957e1461d02169af"
+        },
+        {
+          "bytes": 1836,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/report.json",
+          "sha256": "e4fcbec537bfeb69ba7eea0db451fb6079d27d1d07c1f5a52c75589fe40fd8c0"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 201024,
+          "original_sha256": "f5ca125bb316e884b054f3f8f4631c30c342431b19f3ebb7310f87075b4da444",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S017/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "f5ca125bb316e884b054f3f8f4631c30c342431b19f3ebb7310f87075b4da444"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S018": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 427,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S018/reward.json",
+          "sha256": "d99712de67027e1e1dbd9cf48b2cfe100765107c57544994ec60ba54b446e231"
+        },
+        {
+          "bytes": 1852,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S018/report.json",
+          "sha256": "e7a197ec53de42f6f25be4f1d7164eb1a5f4241b6efe72469b4214e60ed49ef2"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S018/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 201367,
+          "original_sha256": "15d1fa538d900e89e1742f895ffae6a86f6acd5068233d9892e1e1d1f9500927",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S018/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "15d1fa538d900e89e1742f895ffae6a86f6acd5068233d9892e1e1d1f9500927"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S019": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 425,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/reward.json",
+          "sha256": "cf39ffa7598c90d9e1b38acae2f81d767f7b389a0e227bf515ec05554e993ef2"
+        },
+        {
+          "bytes": 1850,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/report.json",
+          "sha256": "e5f9d0d149d9b5e25755cccc4590fd6e2d6f0d65ea9c7100da3abc3fc06a09eb"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 201901,
+          "original_sha256": "c9d14b6fb3539e8144a83a14dd28137bfc99688cb152fb3d31a17d2da222cc8f",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S019/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "c9d14b6fb3539e8144a83a14dd28137bfc99688cb152fb3d31a17d2da222cc8f"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S020": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 411,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S020/reward.json",
+          "sha256": "2494e361d8384f91bebe4c418c4691829d7c5d0128df1698a855b76a2a5e02c6"
+        },
+        {
+          "bytes": 1836,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S020/report.json",
+          "sha256": "29a473e29f49e72ac391e0c32713b6b06746b363f23ec157c8b436dfdc5cc6f8"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S020/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 201067,
+          "original_sha256": "9624fe4e9ebb13eb0fdae991526b446a2d0378553e67c5f34452ccc7fbf3040f",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S020/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "9624fe4e9ebb13eb0fdae991526b446a2d0378553e67c5f34452ccc7fbf3040f"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S021": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 411,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/reward.json",
+          "sha256": "387f2b4b23f9913a25567b441e8d48a08e4295357fdfb9dc8281cf53aea64705"
+        },
+        {
+          "bytes": 1836,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/report.json",
+          "sha256": "5faee579b4dc6c0681bf14a98af6180f2f6eb59d7e1ff2bf4da59a507f7719e3"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 201063,
+          "original_sha256": "df4faca93098bf5dfdfaa10f266ab565f621897e03fa09ba6aae387152d6ecd7",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S021/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "df4faca93098bf5dfdfaa10f266ab565f621897e03fa09ba6aae387152d6ecd7"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S022": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 410,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S022/reward.json",
+          "sha256": "da46d096a91cb4032050febc399e02a8e5e02ea9554e2d50e9560bb1eaee7514"
+        },
+        {
+          "bytes": 1835,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S022/report.json",
+          "sha256": "c7b134077ad78a388e3dd42584b4b8736a05c2df1044adc2be408c4bcfdca40b"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S022/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 202382,
+          "original_sha256": "6f4441a6fa374a49bc67eb18068a580fc23562e1cd3c2bf6c985db0a28052b4f",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S022/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "6f4441a6fa374a49bc67eb18068a580fc23562e1cd3c2bf6c985db0a28052b4f"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S023": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 410,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S023/reward.json",
+          "sha256": "7babf1d4bea2ff8dad646e4e251bdbc08866d765815ceb7a92cb668be49b3fc0"
+        },
+        {
+          "bytes": 1835,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S023/report.json",
+          "sha256": "66649ae10544c5dec7879f9ef857ea655db261b7a02424b2cf2f830506d3f3f6"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S023/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 202213,
+          "original_sha256": "98755a6d5844586b80be1076f705bc2a5d02c3fb0b0199f50b4ac902689aaca5",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S023/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "98755a6d5844586b80be1076f705bc2a5d02c3fb0b0199f50b4ac902689aaca5"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 24105,
+            "path": "reproduction/files/49/49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a/native_verifier.py",
+            "sha256": "49343b8281a339caa84d5c2ccf269bfb52ac1e97fdff8a02a95bb25d262d2b3a"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37135,
+            "path": "reproduction/files/9b/9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8/runtime.py",
+            "sha256": "9b5dd306ea7b19c77e368190a859eb21d6465eb1255b523023efa80b9e07bbf8"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11324,
+            "path": "reproduction/files/f7/f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f/task_profiles.py",
+            "sha256": "f76d53da4d05860fca82152f0d2f82e71639d171353ec820db1ab8655a85728f"
+          }
+        }
+      ]
+    },
+    "S024": {
+      "execution": {
+        "adapted_execution": true,
+        "deviations": [
+          "Research used 1 H100, 22 CPUs and 224 GiB requested RAM.",
+          "Beaker may grant more RAM than the verifier request.",
+          "Existing task runtime image with frozen native verifier sources mounted.",
+          "Operator authorized adapted execution on 2026-10-24. Original failed replay retained.",
+          "Landlock replaced by audited source permissions and native unprivileged submission identities.",
+          "Exact GPU inventory and denial of any extra device nodes checked before execution.",
+          "No fresh PID, mount, or network namespace is claimed. Numerical scorer and suite unchanged.",
+          "Upstream combined replay/grader runs as UID10001 with a local input copy; upstream label_isolated_sandbox remains false."
+        ],
+        "image": "01M5DXDHZ2R8QC376P1YE3YNX3",
+        "label_isolated": false,
+        "scientific_scorer_modified": false,
+        "strict_official_resource_equivalence": false,
+        "verifier_budget_seconds": 86400,
+        "verifier_source_sha256": {
+          "environment/evaluation/README.md": "fa35dac30cfcd1f7161829e78680165807755f86980bc5cb6c457a52777ee6c3",
+          "environment/evaluation/stage_inputs.py": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab",
+          "environment/evaluation/track_scores.py": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317",
+          "task.toml": "6aea775ce5d861504dcad4b79374ad592fa09407238d427c277a9e703ebd0286",
+          "tests/Dockerfile": "1cb0ab4d88a824d25d4a5d2952e8803896ec379f8fa2f6f3906bc3ca82e62d0d",
+          "tests/README.md": "7aad2480877479613d9277ab4dde63ad84c092a891e3d1950213c00dbaae8e76",
+          "tests/docker-compose.yaml": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90",
+          "tests/grade.py": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63",
+          "tests/test.sh": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b",
+          "tests/test_data_archives.py": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df",
+          "tests/test_split_suite.py": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431",
+          "tests/test_task.py": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+        }
+      },
+      "files": [
+        {
+          "bytes": 397,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/reward.json",
+          "sha256": "ab8f29b0023183054ade381cf1fe933d8db0c5c977bb1f190c6583d49f2e1984"
+        },
+        {
+          "bytes": 1822,
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/report.json",
+          "sha256": "e3be3a2725301c8a0eb601ca5fdd043e3e1c0c69d963944ad1ed3d91f59b92cb"
+        },
+        {
+          "bytes": 0,
+          "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/logs/inference/verifier.log",
+          "redactions": 0,
+          "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+        },
+        {
+          "bytes": 201363,
+          "original_sha256": "c10bd5441f710c4b182b5a996733d86ce68fa8ef3662f8522e9a7eaf889bb334",
+          "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/evaluations/S024/logs/inference/results/scoring.log",
+          "redactions": 0,
+          "sha256": "c10bd5441f710c4b182b5a996733d86ce68fa8ef3662f8522e9a7eaf889bb334"
+        }
+      ],
+      "runner_sources": [
+        {
+          "original_path": "adapted_boundary.py",
+          "stored": {
+            "bytes": 4481,
+            "path": "reproduction/files/9d/9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2/adapted_boundary.py",
+            "sha256": "9df966825750e6addf6fc73330bf15fbd4d1d0a234e2c10932c79313870421f2"
+          }
+        },
+        {
+          "original_path": "gpu_access.py",
+          "stored": {
+            "bytes": 4895,
+            "path": "reproduction/files/df/df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763/gpu_access.py",
+            "sha256": "df9261979dccc2e709b4e6cdafb2fe18df1d139799b5dbcefb1581689eed6763"
+          }
+        },
+        {
+          "original_path": "native_verifier.py",
+          "stored": {
+            "bytes": 16296,
+            "path": "reproduction/files/8c/8c88ce8a01ca5f3f8b842c2d78b36a5a324ac308a0ca2bfe7227fb3d183f6224/native_verifier.py",
+            "sha256": "8c88ce8a01ca5f3f8b842c2d78b36a5a324ac308a0ca2bfe7227fb3d183f6224"
+          }
+        },
+        {
+          "original_path": "runtime.py",
+          "stored": {
+            "bytes": 37058,
+            "path": "reproduction/files/ab/abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c/runtime.py",
+            "sha256": "abe4b85f9c39d9c193a4233fd1ad007c8ea342d13266e493e9ceb261ed66c87c"
+          }
+        },
+        {
+          "original_path": "sealed_sandbox.py",
+          "stored": {
+            "bytes": 10287,
+            "path": "reproduction/files/9e/9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c/sealed_sandbox.py",
+            "sha256": "9eb5943f537cc11091b6c1d1a040c332fb03f0076aee990dd25f82dcd7cbd39c"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/stage_inputs.py",
+          "stored": {
+            "bytes": 3493,
+            "path": "reproduction/files/ca/ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab/stage_inputs.py",
+            "sha256": "ca25fc66e7b18ddf9f481503eaead55b6521f1f797eb0a46048e21953e99a6ab"
+          }
+        },
+        {
+          "original_path": "task/environment/evaluation/track_scores.py",
+          "stored": {
+            "bytes": 3088,
+            "path": "reproduction/files/57/57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317/track_scores.py",
+            "sha256": "57fc95003bffc7415ff53e20403087bac986a4d024c5853f2641bab3799d8317"
+          }
+        },
+        {
+          "original_path": "task/tests/docker-compose.yaml",
+          "stored": {
+            "bytes": 514,
+            "path": "reproduction/files/e7/e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90/docker-compose.yaml",
+            "sha256": "e7e09577eb2c799029eab3ef02292cd3b70bc3aca994d2d957ca6434ed8eae90"
+          }
+        },
+        {
+          "original_path": "task/tests/grade.py",
+          "stored": {
+            "bytes": 23650,
+            "path": "reproduction/files/ea/ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63/grade.py",
+            "sha256": "ea6e44c9e0ddda27e326185913111856b38c4c47f6a8ef1a7c6ee7c4abc21a63"
+          }
+        },
+        {
+          "original_path": "task/tests/test.sh",
+          "stored": {
+            "bytes": 275,
+            "path": "reproduction/files/2b/2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b/test.sh",
+            "sha256": "2b508bc68bc11a3b60308bd340b0371b179305c676b3976bc88e7a169a37841b"
+          }
+        },
+        {
+          "original_path": "task/tests/test_data_archives.py",
+          "stored": {
+            "bytes": 8644,
+            "path": "reproduction/files/b2/b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df/test_data_archives.py",
+            "sha256": "b29405842a458f7c0e6fc196bb3c09225b6c2373517267e490fdd3d8e87e39df"
+          }
+        },
+        {
+          "original_path": "task/tests/test_split_suite.py",
+          "stored": {
+            "bytes": 5809,
+            "path": "reproduction/files/f2/f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431/test_split_suite.py",
+            "sha256": "f262c7a821733d4a9c1776e623263a394f04466d614de728ccd65efc7979a431"
+          }
+        },
+        {
+          "original_path": "task/tests/test_task.py",
+          "stored": {
+            "bytes": 31031,
+            "path": "reproduction/files/ae/aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172/test_task.py",
+            "sha256": "aecf06d1dcab395fd66254761ecde7bd0050a31457ea291cf10fd9cf4af18172"
+          }
+        },
+        {
+          "original_path": "task_profiles.py",
+          "stored": {
+            "bytes": 11320,
+            "path": "reproduction/files/a1/a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7/task_profiles.py",
+            "sha256": "a1640e03aa2b049e00063c0d360277f3f83d180a6f053c517b91e0bc770a9ec7"
+          }
+        }
+      ]
+    }
+  },
+  "finalization": {
+    "files": [
+      {
+        "bytes": 68652,
+        "original_sha256": "e21f2ed05bf1b6a7d5a53458ff63cec817566d5e5da657f8fd651f91bb746727",
+        "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/trajectory.jsonl",
+        "redactions": 0,
+        "sha256": "e21f2ed05bf1b6a7d5a53458ff63cec817566d5e5da657f8fd651f91bb746727"
+      },
+      {
+        "bytes": 0,
+        "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+        "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/codex.stderr",
+        "redactions": 0,
+        "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+      },
+      {
+        "bytes": 1351,
+        "original_sha256": "5d4d209566b43190ed790b963dc8214aeb6cae97cc4df8ef46346a3e94bdf82f",
+        "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/publication-review.json",
+        "redactions": 0,
+        "sha256": "5d4d209566b43190ed790b963dc8214aeb6cae97cc4df8ef46346a3e94bdf82f"
+      },
+      {
+        "bytes": 878,
+        "original_sha256": "40a0133e03ab296dc2342c603ef9dff621c17e5140a150fdc0b8e2ad0252bbec",
+        "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/status.json",
+        "redactions": 0,
+        "sha256": "40a0133e03ab296dc2342c603ef9dff621c17e5140a150fdc0b8e2ad0252bbec"
+      },
+      {
+        "bytes": 1066,
+        "original_sha256": "342831a2ba581515a963e4b88ab9f53ec1d65698eb6378183197e568b4e34446",
+        "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/prompt.txt",
+        "redactions": 0,
+        "sha256": "342831a2ba581515a963e4b88ab9f53ec1d65698eb6378183197e568b4e34446"
+      }
+    ],
+    "label": "48h-plus-5m-submission-only",
+    "package": {
+      "checkpoint": "GRACE_FINAL",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 448,
+          "name": ".model-final-h850g2e6"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/README.md",
+          "stored": {
+            "bytes": 4557,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/README.md",
+            "sha256": "95630d89ff56248e60e49239d4faf3a2a3881b3ccaa272ceb01018f69a8548e3"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/batch_replay.py",
+          "stored": {
+            "bytes": 14066,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/batch_replay.py",
+            "sha256": "cb4206b92dfcbabaf86a22e97b5b5b2b81e390539fd5dd1ee1c30d372c909cd5"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-final-h850g2e6/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8607,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/architecture.py",
+            "sha256": "d0ec81e9c5e77b8ec29a2727210a78a0d3403cb59c3b60ea50fc8a4bb23a396b"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/terminal_inference.py",
+          "stored": {
+            "bytes": 1338,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/terminal_inference.py",
+            "sha256": "b1fe056691b7d305756ff75780b3570ac7c41b5b0d2f14ecab3c5cc227b6201a"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/esmfold2_50m/terminal_refiner.py",
+          "stored": {
+            "bytes": 2084,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/esmfold2_50m/terminal_refiner.py",
+            "sha256": "0342151cb727003b692630dfa1f37cabefc4f55db3bdbc358128c952c9a5b26a"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-final-h850g2e6/infer.sh",
+          "stored": {
+            "bytes": 288,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/infer.sh",
+            "sha256": "dbf822cb169daeed7bf143b87d768aa9b6e796b5a1cd4dc1d8b0e5b22b28b439"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/model.py",
+          "stored": {
+            "bytes": 1026,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/model.py",
+            "sha256": "81a0959bf8c3358db080ec56b056d4a5fbb402538a49b3c24623e9bc16d3a5d0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 384,
+          "name": ".model-final-h850g2e6/model.safetensors",
+          "stored": {
+            "bytes": 204795180,
+            "path": "shared/package-files/40/4006c7d2e920ef4ef03a2a29284e2c643aea67fefbab2b57a48f2b40d6a11d65/model.safetensors",
+            "sha256": "4006c7d2e920ef4ef03a2a29284e2c643aea67fefbab2b57a48f2b40d6a11d65"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/model_config.json",
+          "stored": {
+            "bytes": 928,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/model_config.json",
+            "sha256": "2fb673e05bb133de794711ab5e8c31c77226cf8154b321fb8c4289519d8aa8ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-final-h850g2e6/predict.py",
+          "stored": {
+            "bytes": 5316,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/.model-final-h850g2e6/predict.py",
+            "sha256": "8537d05cc8c02f1c85633524b04ec6b7ef5bfb82ab41a6fcbacd220ffaa269cf"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-final-h850g2e6"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/finalization/submission/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "2102182513b542d080dccbbff140d9234fbb08ec326c124b8516ac93a84edb0b",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "publication_seconds": 89.00340273900656
+  },
+  "images": [
+    {
+      "beaker": "01M5DXDHZ2R8QC376P1YE3YNX3"
+    }
+  ],
+  "logs": [
+    {
+      "bytes": 57977916,
+      "original_sha256": "29d662aff6c9e4bc91935cfaff344c5f47ef19fff59da8c6375cbb4ad8aa16bc",
+      "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/trajectory.jsonl",
+      "redactions": 0,
+      "sha256": "29d662aff6c9e4bc91935cfaff344c5f47ef19fff59da8c6375cbb4ad8aa16bc"
+    },
+    {
+      "bytes": 1299,
+      "original_sha256": "aed0e60468ff388efb847e6bac957c3cd0adbd7d798d5b8e82c5f19d794bac01",
+      "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/codex.stderr",
+      "redactions": 0,
+      "sha256": "aed0e60468ff388efb847e6bac957c3cd0adbd7d798d5b8e82c5f19d794bac01"
+    },
+    {
+      "bytes": 1766,
+      "original_sha256": "371f9b015294ff33fb9664012f790750143a0db9f78ec63ff8457610f2bd94ea",
+      "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/preflight.jsonl",
+      "redactions": 0,
+      "sha256": "371f9b015294ff33fb9664012f790750143a0db9f78ec63ff8457610f2bd94ea"
+    },
+    {
+      "bytes": 0,
+      "original_sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
+      "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/preflight.stderr",
+      "redactions": 0,
+      "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
+    },
+    {
+      "bytes": 189685870,
+      "original_sha256": "dd904e34a7b4a72e0d78ee06146f68684634fec848d2d6d5974fdfa2fc2c2cce",
+      "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/sessions/2026/10/21/rollout-2026-10-21T03-56-53-01a15c9a-d4f1-7362-bb62-98fac1f6ceb3.jsonl",
+      "redactions": 6,
+      "sha256": "fc01ca2225e8073ac3121de8ec9178fd83fb2af1a640093faed7f8ca27c21f65"
+    }
+  ],
+  "model": "gpt-6-astra",
+  "operator_fairness_review": {
+    "estimated_operator_caused_loss_seconds": 7000,
+    "file": "reviews/fairness-20261031/per-task/protein-folding-prediction.json",
+    "remedy": "disclose; targeted repair: (1) runtime.py must consume recovery-notice.txt after first delivery (rename/delete) and any auto-resume should regenerate a notice with the actual remaining seconds from research-state.json; (2) grant LANDLOCK_ACCESS_FS_REFER (or drop use_legacy_landlock) so cross-directory rename works, and add a cross-directory rename probe to preflight; (3) enable the offline loopback namespace for 1-GPU tasks whose baselines use torchrun; (4) record Beaker job status for auto-resumed attempts so preemptions are documented like recoveries. No rerun needed for this trial.",
+    "verdict": "minor (disclose)"
+  },
+  "packages": {
+    "S001": {
+      "checkpoint": "S001",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S001",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 448,
+          "name": "tmp0ziczoax"
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": "tmp0ziczoax/nested"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": "tmp0ziczoax/nested/a",
+          "stored": {
+            "bytes": 4,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S001/tmp0ziczoax/nested/a",
+            "sha256": "9f86d081884c7d659a2feaa0c55ad015a3bf4f1b2b0b822cd15d6c15b0f00a08"
+          }
+        }
+      ],
+      "fingerprint": "5b5eb00a38542b26d878f3e9048c44e41f00019c2dafbef1a1ba3973280a896e",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S002": {
+      "checkpoint": "S002",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-qgq6nahp"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/README.md",
+          "stored": {
+            "bytes": 730,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/README.md",
+            "sha256": "8c99e500a2c79c087fbb2b1e2a7e5598b4d4ea3eecb30627c41a459e7d2d1eba"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-qgq6nahp/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8196,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/esmfold2_50m/architecture.py",
+            "sha256": "d8acaefd16fecb0a9af1c54fa298198e6a7084e44df095d55b6b914f151d3dd2"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3115,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/esmfold2_50m/config.py",
+            "sha256": "d6bd311d52fdab46d3ca7ec0ac3bab8627942d8d8a3ea6a3bb5c3b8eb7617804"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 9420,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/esmfold2_50m/runtime.py",
+            "sha256": "7e4da9a4ba56da2049875d035c999971b48033840692550038277d389e2b621c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-qgq6nahp/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/model.safetensors",
+          "stored": {
+            "bytes": 196871800,
+            "path": "shared/package-files/87/874d8e1317e67f66dfb80e7e8350515c80774f782e93469b637b2ae98aad687f/model.safetensors",
+            "sha256": "874d8e1317e67f66dfb80e7e8350515c80774f782e93469b637b2ae98aad687f"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/model_config.json",
+          "stored": {
+            "bytes": 346,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/model_config.json",
+            "sha256": "10e0370dc5ad7a8b7a828be60f77b464c046222a329dba26035922295cc154a0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-qgq6nahp/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/.model-qgq6nahp/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-qgq6nahp"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S002/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "367efd3b96ab6daaa5126b8743a85f09b93936cfc5ebc00fa536cd8d96f03fe4",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S003": {
+      "checkpoint": "S003",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-jgokhg6s"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/README.md",
+          "stored": {
+            "bytes": 1463,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/README.md",
+            "sha256": "9b2053df665842499a0f4ac2d6df6081fd744a55c802d0d0ee72391235a3a5fe"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-jgokhg6s/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8196,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/esmfold2_50m/architecture.py",
+            "sha256": "d8acaefd16fecb0a9af1c54fa298198e6a7084e44df095d55b6b914f151d3dd2"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3115,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/esmfold2_50m/config.py",
+            "sha256": "d6bd311d52fdab46d3ca7ec0ac3bab8627942d8d8a3ea6a3bb5c3b8eb7617804"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 9420,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/esmfold2_50m/runtime.py",
+            "sha256": "7e4da9a4ba56da2049875d035c999971b48033840692550038277d389e2b621c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-jgokhg6s/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/model.safetensors",
+          "stored": {
+            "bytes": 196871800,
+            "path": "shared/package-files/36/36677b2557e448fa8c3689ac7786d33bda656cbe6c4c591a478dee8d16ab15a3/model.safetensors",
+            "sha256": "36677b2557e448fa8c3689ac7786d33bda656cbe6c4c591a478dee8d16ab15a3"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/model_config.json",
+          "stored": {
+            "bytes": 346,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/model_config.json",
+            "sha256": "10e0370dc5ad7a8b7a828be60f77b464c046222a329dba26035922295cc154a0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-jgokhg6s/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/.model-jgokhg6s/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-jgokhg6s"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S003/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "bbeb05cf3d9a7f31f09a48c7a655a959904a050ee48504a1ae594892f6677157",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S004": {
+      "checkpoint": "S004",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-q6wqowfd"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/README.md",
+          "stored": {
+            "bytes": 2141,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/README.md",
+            "sha256": "be8beb68dc6cb38eb6f20c0e13ddaf4241e0640cad29172674d03a31d17b1cdb"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-q6wqowfd/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8384,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/architecture.py",
+            "sha256": "32583b6e227836f501f36e5542f9444bf2d1497deb174f2790239bf3d8d662bc"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3115,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/config.py",
+            "sha256": "d6bd311d52fdab46d3ca7ec0ac3bab8627942d8d8a3ea6a3bb5c3b8eb7617804"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 9420,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/esmfold2_50m/runtime.py",
+            "sha256": "7e4da9a4ba56da2049875d035c999971b48033840692550038277d389e2b621c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-q6wqowfd/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/model.safetensors",
+          "stored": {
+            "bytes": 196871800,
+            "path": "shared/package-files/72/72319f7524b088123c67b0604481a2bc11f7ab2b574aaf07a717c1be4883c8f7/model.safetensors",
+            "sha256": "72319f7524b088123c67b0604481a2bc11f7ab2b574aaf07a717c1be4883c8f7"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/model_config.json",
+          "stored": {
+            "bytes": 413,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/model_config.json",
+            "sha256": "d469516699f3f87dbb84a26516f11b09c03a55a93509d3678f2a295b123c6d33"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-q6wqowfd/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/.model-q6wqowfd/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-q6wqowfd"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S004/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "5bf2fc22c1ff8cc8114b32ab66608a09b70d45c4ab54efdbc9d32f9ec35f234c",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S006": {
+      "checkpoint": "S006",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-miwrldjr"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/README.md",
+          "stored": {
+            "bytes": 2223,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/README.md",
+            "sha256": "9fd37ea85fd2e4c5224d93f062a58dd0ee97045332d910c559be324ea71d59d1"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-miwrldjr/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3121,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/config.py",
+            "sha256": "4a7ccf609796e1bc0e221a4abb3fcacbe952950fe43b5ce6c72b42ad405ea2ba"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 8649,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/neural_chemistry.py",
+            "sha256": "5a690834275d1aef3d4f7cb7ff6d5f2950fd26261af74bdd664df50512f70e09"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10023,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/esmfold2_50m/runtime.py",
+            "sha256": "52b2b8b2d1df94e6fd073ddcf247e73383af7542ef8488ed921d3ac0a280d442"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-miwrldjr/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/model.safetensors",
+          "stored": {
+            "bytes": 200407452,
+            "path": "shared/package-files/8a/8abd1957efeb81e26be9353e314b815d3d7529d2245c35ea27219286aee471c0/model.safetensors",
+            "sha256": "8abd1957efeb81e26be9353e314b815d3d7529d2245c35ea27219286aee471c0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/model_config.json",
+          "stored": {
+            "bytes": 568,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/model_config.json",
+            "sha256": "80be00e5445bedbf48bda6f0905709af2cb1892f6032e2b35e1a58b3a89e6b03"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-miwrldjr/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/.model-miwrldjr/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-miwrldjr"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S006/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "fab028219be689cfcbe35e4cd482d285dde1f383ea3374484d5a882d7093c057",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S009": {
+      "checkpoint": "S009",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-n8uxwduk"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/README.md",
+          "stored": {
+            "bytes": 2651,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/README.md",
+            "sha256": "c9ee5ecbb42562d2bd40795e49a6efceead441fdbed9c17003d784a96b94f972"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-n8uxwduk/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3120,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/config.py",
+            "sha256": "3253f30639b80f74af984a314d02a5f174dfd6d12de63fa4b75d446c4594f9e1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 8876,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/neural_chemistry.py",
+            "sha256": "e9ae9995ab541dda085ca1b89fcd1c170f591dad48c5939795a96d30731ddeb0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10023,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/runtime.py",
+            "sha256": "52b2b8b2d1df94e6fd073ddcf247e73383af7542ef8488ed921d3ac0a280d442"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-n8uxwduk/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/model.safetensors",
+          "stored": {
+            "bytes": 200583820,
+            "path": "shared/package-files/6a/6ac74fc65ddc267f4cfe13232de5227c2e9bd6f77523a4f9d64a06b74ff15bbf/model.safetensors",
+            "sha256": "6ac74fc65ddc267f4cfe13232de5227c2e9bd6f77523a4f9d64a06b74ff15bbf"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/model_config.json",
+          "stored": {
+            "bytes": 566,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/model_config.json",
+            "sha256": "fd96224ba039f547fca153bb0aed72c75de93e12dae70a9a3030017a883a81ad"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-n8uxwduk/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/.model-n8uxwduk/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-n8uxwduk"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S009/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "3f631312e94306eed4541bf471dc729f8b3cf0a8e226c4e651b0e2f5225719e7",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S011": {
+      "checkpoint": "S011",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-7cb6jq4_"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/README.md",
+          "stored": {
+            "bytes": 2856,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/README.md",
+            "sha256": "9f5b619da796f09c3c59c59e7f6806dddeb89ef28a5289f779afe584e0db7250"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-7cb6jq4_/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-7cb6jq4_/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/25/25de6dcd85fcf74f4a36a8a293dc6d199c2878c5454c47399bcae87ccd149608/model.safetensors",
+            "sha256": "25de6dcd85fcf74f4a36a8a293dc6d199c2878c5454c47399bcae87ccd149608"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/model_config.json",
+          "stored": {
+            "bytes": 564,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/model_config.json",
+            "sha256": "a1dcf96aa11ce96602d49ac9a2838c5c784aad1028db9753dddda7d0e5b68ffe"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-7cb6jq4_/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/.model-7cb6jq4_/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-7cb6jq4_"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S011/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "65b424d3bf3ba4e1451c2d318eb90bb54605ae4ef74f5b65ce700bbe097754bc",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S012": {
+      "checkpoint": "S012",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-ii1uirbj"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/README.md",
+          "stored": {
+            "bytes": 2856,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/README.md",
+            "sha256": "8088611eb609b4fa76d7c8c75e76de00d882c13884a4b8032b8b4846cf829cb5"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-ii1uirbj/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-ii1uirbj/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/54/54f9b118d4a4a77c0869fcae4098947a44f0a91e83e12641330e7693e0e946ed/model.safetensors",
+            "sha256": "54f9b118d4a4a77c0869fcae4098947a44f0a91e83e12641330e7693e0e946ed"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/model_config.json",
+          "stored": {
+            "bytes": 569,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/model_config.json",
+            "sha256": "9e26a5fe121df855272e6b207389f94e62a89dacdfa6f9d3e989ac306363befb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ii1uirbj/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/.model-ii1uirbj/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-ii1uirbj"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S012/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "2ecfc386c4531964ebf102d5c4008eb811a7b9c155afd2e86062ca73064aa0b6",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S014": {
+      "checkpoint": "S014",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-uxeqt75d"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/README.md",
+          "stored": {
+            "bytes": 3021,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/README.md",
+            "sha256": "af76549db54cfd3caba9e91d519fbecf1850a0cf992119ee4f12fbdc8c8ab4b9"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-uxeqt75d/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-uxeqt75d/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/33/33f05679ae5a3ccbdf7fde9c070897aeb77f34de782faf770baba2f22d3c0c2e/model.safetensors",
+            "sha256": "33f05679ae5a3ccbdf7fde9c070897aeb77f34de782faf770baba2f22d3c0c2e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/model_config.json",
+          "stored": {
+            "bytes": 569,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/model_config.json",
+            "sha256": "cab32ca69ccfbc01b1c6b5ccefab6c2faae1581c0397934d0709cf35bc63b557"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-uxeqt75d/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/.model-uxeqt75d/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-uxeqt75d"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S014/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "ef29c03dcbe93e6aa769159f8cdcf390f9eff0e20938a17a7bb4bc56011d0f6f",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S016": {
+      "checkpoint": "S016",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-ehfnn8z5"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/README.md",
+          "stored": {
+            "bytes": 3767,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/README.md",
+            "sha256": "1aaa2debe25acf7897cb41a75af9815b93be82b70b3db1a57ff2b20372b3f6b0"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-ehfnn8z5/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 11096,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/runtime.py",
+            "sha256": "7f814ff7550599ee79945eb51e354e3669e2b3bf2e5b3590e5b5a6f6aa35ffbd"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/esmfold2_50m/terminal_refinement.py",
+          "stored": {
+            "bytes": 1375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/esmfold2_50m/terminal_refinement.py",
+            "sha256": "dd3799fef754a6584954892f6eb7545f26314e1135c15b7e9981a289a247c39f"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-ehfnn8z5/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/33/33f05679ae5a3ccbdf7fde9c070897aeb77f34de782faf770baba2f22d3c0c2e/model.safetensors",
+            "sha256": "33f05679ae5a3ccbdf7fde9c070897aeb77f34de782faf770baba2f22d3c0c2e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/model_config.json",
+          "stored": {
+            "bytes": 741,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/model_config.json",
+            "sha256": "2e48daec001f418dfeabffac8521676c87051bf1e9ae4cb650cacf2de0017975"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-ehfnn8z5/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/.model-ehfnn8z5/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-ehfnn8z5"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S016/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "b93b585d214979002f8f3ecad334b326ba522426bbf97d706ce41cf6986495c0",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S017": {
+      "checkpoint": "S017",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-3e1u26zg"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/README.md",
+          "stored": {
+            "bytes": 3447,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/README.md",
+            "sha256": "9024211fbb0f6abe5b0a3790574f84108884334c886e84e8826f1ea4e0375995"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-3e1u26zg/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-3e1u26zg/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/6d/6d353eaeb8b493b05ac824d869f4b34c1fe80ef6345e5d662bad637139fa287e/model.safetensors",
+            "sha256": "6d353eaeb8b493b05ac824d869f4b34c1fe80ef6345e5d662bad637139fa287e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/model_config.json",
+          "stored": {
+            "bytes": 573,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/model_config.json",
+            "sha256": "c164178db0e392be6b3b09629b10a0d0c20da3510ff763bbadbfbd26af3a8a02"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-3e1u26zg/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/.model-3e1u26zg/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-3e1u26zg"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S017/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "4072baf8a87249389aa2e9f36b270754deefec8ae91844e94b7f95340728054d",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S018": {
+      "checkpoint": "S018",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-a7b5amar"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/README.md",
+          "stored": {
+            "bytes": 3448,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/README.md",
+            "sha256": "79405f239a1764527f9d8f6642c85f73c642c7d778e8198b75f3724d6a2d3f2c"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-a7b5amar/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-a7b5amar/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/bc/bc2ed56d812f48fcc5ddf6150e2a86eb7895ba598622e979dec47463b85f6527/model.safetensors",
+            "sha256": "bc2ed56d812f48fcc5ddf6150e2a86eb7895ba598622e979dec47463b85f6527"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/model_config.json",
+          "stored": {
+            "bytes": 573,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/model_config.json",
+            "sha256": "09368aba0c13ed11d8706439effd2fa1290964e74971b437bf5e64f448e78abd"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-a7b5amar/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/.model-a7b5amar/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-a7b5amar"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S018/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "5bdc556952dc55461a0712dbdc2f9ae2b1bf3f72d35036eebc4cc4a7156d913c",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S019": {
+      "checkpoint": "S019",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-oa37g46b"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/README.md",
+          "stored": {
+            "bytes": 3797,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/README.md",
+            "sha256": "f46a828ed95469a14296574ae0a089d158826f88d3469742e597e440ecf93966"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-oa37g46b/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-oa37g46b/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/a7/a7433134a6845d39d30ebb1986c6eae3274a6955062ae6a677a94a1688bd5e28/model.safetensors",
+            "sha256": "a7433134a6845d39d30ebb1986c6eae3274a6955062ae6a677a94a1688bd5e28"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/model_config.json",
+          "stored": {
+            "bytes": 633,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/model_config.json",
+            "sha256": "12aa1197c25a0419064c91a0f3eb228fffd29421c083a87f467584e434437956"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-oa37g46b/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/.model-oa37g46b/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-oa37g46b"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S019/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "e3b95171018850f4bbcdcaf7d428b82c30cfca7575724e301ff964e252fac16e",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S020": {
+      "checkpoint": "S020",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-1eiuxl4e"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/README.md",
+          "stored": {
+            "bytes": 3200,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/README.md",
+            "sha256": "40da89b9cf513bf9e3bca3f153242e89f59b297a4cd6902f199e0293891fa05f"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-1eiuxl4e/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-1eiuxl4e/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/model.py",
+          "stored": {
+            "bytes": 128,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/model.py",
+            "sha256": "4514f5e798108ed71f854c1018ba92bde6404f131f6131f11eb17345a965fe21"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/77/7760fb005f39cda412522c5bfad4bd18ed7e95a06efc0d2a66ba783cf8dab042/model.safetensors",
+            "sha256": "7760fb005f39cda412522c5bfad4bd18ed7e95a06efc0d2a66ba783cf8dab042"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/model_config.json",
+          "stored": {
+            "bytes": 627,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/model_config.json",
+            "sha256": "2031550a06afe7fbad30c353203759cfc996208854bd84bccd4e757fd563873c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-1eiuxl4e/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/.model-1eiuxl4e/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-1eiuxl4e"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S020/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "6d5ba7b5b26665c52acd5e1c1e23c16ae178986cef079145e91481c954f6fd01",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S021": {
+      "checkpoint": "S021",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-b_pmi1dd"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/README.md",
+          "stored": {
+            "bytes": 3333,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/README.md",
+            "sha256": "aeabf63e65661348da2e61cbc6aa121370e38ac732f90e78e50fb31fe1855d12"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-b_pmi1dd/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-b_pmi1dd/infer.sh",
+          "stored": {
+            "bytes": 283,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/infer.sh",
+            "sha256": "75f01e116c97707db671a0f76b2537e3b282bc58dae6028181bca41441159bc8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/model.py",
+          "stored": {
+            "bytes": 348,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/model.py",
+            "sha256": "d6acd80371a41f948ea50455c637c75c3abc5a419630b06268ec5956582358b9"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/77/7760fb005f39cda412522c5bfad4bd18ed7e95a06efc0d2a66ba783cf8dab042/model.safetensors",
+            "sha256": "7760fb005f39cda412522c5bfad4bd18ed7e95a06efc0d2a66ba783cf8dab042"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/model_config.json",
+          "stored": {
+            "bytes": 627,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/model_config.json",
+            "sha256": "2031550a06afe7fbad30c353203759cfc996208854bd84bccd4e757fd563873c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-b_pmi1dd/predict.py",
+          "stored": {
+            "bytes": 4945,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/.model-b_pmi1dd/predict.py",
+            "sha256": "bd16bfc5e8dc6e6da59cfff3938bef3fa333f6083f9816943ab164c1b4487998"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-b_pmi1dd"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S021/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "4ff0883916224736bc7a5625f5de7796523e13546ab2d92dcd87ecf5b1d4d0f6",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S022": {
+      "checkpoint": "S022",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-wp2r_2lb"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/README.md",
+          "stored": {
+            "bytes": 3189,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/README.md",
+            "sha256": "539c0c515dc6889708a9d3ea89af4ae07c7f478f8c312a3b99848056bf76320d"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/batch_replay.py",
+          "stored": {
+            "bytes": 14066,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/batch_replay.py",
+            "sha256": "cb4206b92dfcbabaf86a22e97b5b5b2b81e390539fd5dd1ee1c30d372c909cd5"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-wp2r_2lb/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8510,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/architecture.py",
+            "sha256": "2e6c339d66f987407c43541ae65531a1bf640be9f633f943f56d3e8907b9dc4e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-wp2r_2lb/infer.sh",
+          "stored": {
+            "bytes": 288,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/infer.sh",
+            "sha256": "dbf822cb169daeed7bf143b87d768aa9b6e796b5a1cd4dc1d8b0e5b22b28b439"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/model.py",
+          "stored": {
+            "bytes": 1026,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/model.py",
+            "sha256": "81a0959bf8c3358db080ec56b056d4a5fbb402538a49b3c24623e9bc16d3a5d0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/model.safetensors",
+          "stored": {
+            "bytes": 201095220,
+            "path": "shared/package-files/77/7760fb005f39cda412522c5bfad4bd18ed7e95a06efc0d2a66ba783cf8dab042/model.safetensors",
+            "sha256": "7760fb005f39cda412522c5bfad4bd18ed7e95a06efc0d2a66ba783cf8dab042"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/model_config.json",
+          "stored": {
+            "bytes": 627,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/model_config.json",
+            "sha256": "2031550a06afe7fbad30c353203759cfc996208854bd84bccd4e757fd563873c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-wp2r_2lb/predict.py",
+          "stored": {
+            "bytes": 5316,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/.model-wp2r_2lb/predict.py",
+            "sha256": "8537d05cc8c02f1c85633524b04ec6b7ef5bfb82ab41a6fcbacd220ffaa269cf"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-wp2r_2lb"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S022/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "31c63dc04eab6066d6698884079fdf6df1b2fdfc158df80bfce3d05844671254",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S023": {
+      "checkpoint": "S023",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 448,
+          "name": ".model-i_yfe8fw"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/README.md",
+          "stored": {
+            "bytes": 4412,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/README.md",
+            "sha256": "3dd31d501ccb9e3542163f5eb827de15bc3795fa2f8c57aa25758b5689ea306d"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/batch_replay.py",
+          "stored": {
+            "bytes": 14066,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/batch_replay.py",
+            "sha256": "cb4206b92dfcbabaf86a22e97b5b5b2b81e390539fd5dd1ee1c30d372c909cd5"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-i_yfe8fw/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8607,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/architecture.py",
+            "sha256": "d0ec81e9c5e77b8ec29a2727210a78a0d3403cb59c3b60ea50fc8a4bb23a396b"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/terminal_inference.py",
+          "stored": {
+            "bytes": 1338,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/terminal_inference.py",
+            "sha256": "b1fe056691b7d305756ff75780b3570ac7c41b5b0d2f14ecab3c5cc227b6201a"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/esmfold2_50m/terminal_refiner.py",
+          "stored": {
+            "bytes": 2084,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/esmfold2_50m/terminal_refiner.py",
+            "sha256": "0342151cb727003b692630dfa1f37cabefc4f55db3bdbc358128c952c9a5b26a"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-i_yfe8fw/infer.sh",
+          "stored": {
+            "bytes": 288,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/infer.sh",
+            "sha256": "dbf822cb169daeed7bf143b87d768aa9b6e796b5a1cd4dc1d8b0e5b22b28b439"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/model.py",
+          "stored": {
+            "bytes": 1026,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/model.py",
+            "sha256": "81a0959bf8c3358db080ec56b056d4a5fbb402538a49b3c24623e9bc16d3a5d0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 384,
+          "name": ".model-i_yfe8fw/model.safetensors",
+          "stored": {
+            "bytes": 204795180,
+            "path": "shared/package-files/07/07c23a3ddb2f3828d73c3fe6f449e785c18dc33182e05aca2e7054737ece5ac8/model.safetensors",
+            "sha256": "07c23a3ddb2f3828d73c3fe6f449e785c18dc33182e05aca2e7054737ece5ac8"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/model_config.json",
+          "stored": {
+            "bytes": 843,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/model_config.json",
+            "sha256": "3516103cb7fb5a679b5fd42914181484fdfdc6ca9465a3d0f0cae6070dbcb371"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-i_yfe8fw/predict.py",
+          "stored": {
+            "bytes": 5316,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/.model-i_yfe8fw/predict.py",
+            "sha256": "8537d05cc8c02f1c85633524b04ec6b7ef5bfb82ab41a6fcbacd220ffaa269cf"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-i_yfe8fw"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S023/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "9259f87edd0f3d2c56e5fc932f5a7b3b100fc0ae5c9d728cc6d77d27a3b97e03",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    },
+    "S024": {
+      "checkpoint": "S024",
+      "destination": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024",
+      "entries": [
+        {
+          "kind": "directory",
+          "mode": 448,
+          "name": ".model-_z9e6u01"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/README.md",
+          "stored": {
+            "bytes": 4534,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/README.md",
+            "sha256": "025946ad44c72d12c87e0201f2b458eecf03d289780931705c1564ebd32ec520"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/batch_replay.py",
+          "stored": {
+            "bytes": 14066,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/batch_replay.py",
+            "sha256": "cb4206b92dfcbabaf86a22e97b5b5b2b81e390539fd5dd1ee1c30d372c909cd5"
+          }
+        },
+        {
+          "kind": "directory",
+          "mode": 493,
+          "name": ".model-_z9e6u01/esmfold2_50m"
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/__init__.py",
+          "stored": {
+            "bytes": 104,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/__init__.py",
+            "sha256": "ab08a3a2bdf7a536074d1814a5dc6ff8cc584004c053b47e7c556bf4337ec4ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/adapter.py",
+          "stored": {
+            "bytes": 12736,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/adapter.py",
+            "sha256": "62aa296a9899378d2642bcef3740229f8a70110b3827e74d8a7c55b40dbd5399"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/architecture.py",
+          "stored": {
+            "bytes": 8607,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/architecture.py",
+            "sha256": "d0ec81e9c5e77b8ec29a2727210a78a0d3403cb59c3b60ea50fc8a4bb23a396b"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/audit.py",
+          "stored": {
+            "bytes": 1246,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/audit.py",
+            "sha256": "2662079c5c4caad7a06d7bc7878f0e0b83fcace3eafaf85f54279329235cf148"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/cache.py",
+          "stored": {
+            "bytes": 768,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/cache.py",
+            "sha256": "6b8fdc66b635a9912aecebcb0c9b7f66816394d39ee3f6e318735abba6c768c1"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/confidence.py",
+          "stored": {
+            "bytes": 7502,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/confidence.py",
+            "sha256": "2ff61432a871e3a8470b259362cb9b8987dbb4b7737b99deaa92164ea7138048"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/config.py",
+          "stored": {
+            "bytes": 3117,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/config.py",
+            "sha256": "9e000a16195f02872a75dc39c80446e8a43926fb67b795c68ce603a097fada66"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/features.py",
+          "stored": {
+            "bytes": 981,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/features.py",
+            "sha256": "8abea641e1f4953620c0916f247bd9c45a00469598382514c265bb84193c3f27"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/neural_chemistry.py",
+          "stored": {
+            "bytes": 9265,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/neural_chemistry.py",
+            "sha256": "4e5ee5b2560ac993f90fd610459a7621143c6095fa95c504d1670d402b9f17bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/pair_geometry.py",
+          "stored": {
+            "bytes": 4323,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/pair_geometry.py",
+            "sha256": "d561a3766baa7d1f2fac57d8d8bca3a80afe49036987d7cea7afd9a5dfb7821e"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/recipe.py",
+          "stored": {
+            "bytes": 6197,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/recipe.py",
+            "sha256": "822919262ae10f3f9722070c60e99816bf8aa76bb1e821d9795d612661d06ea0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/runtime.py",
+          "stored": {
+            "bytes": 10375,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/runtime.py",
+            "sha256": "c1db16b54a2bee8572477e3defaedce4a507b8a309d3269e97b5e94ef1cad4bb"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/spatial_contacts.py",
+          "stored": {
+            "bytes": 6552,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/spatial_contacts.py",
+            "sha256": "3681c0671cc51a016796fae11c38939e7a916d3e67f8c7c6067eaba8f172aa1c"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/terminal_inference.py",
+          "stored": {
+            "bytes": 1338,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/terminal_inference.py",
+            "sha256": "b1fe056691b7d305756ff75780b3570ac7c41b5b0d2f14ecab3c5cc227b6201a"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/esmfold2_50m/terminal_refiner.py",
+          "stored": {
+            "bytes": 2084,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/esmfold2_50m/terminal_refiner.py",
+            "sha256": "0342151cb727003b692630dfa1f37cabefc4f55db3bdbc358128c952c9a5b26a"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": ".model-_z9e6u01/infer.sh",
+          "stored": {
+            "bytes": 288,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/infer.sh",
+            "sha256": "dbf822cb169daeed7bf143b87d768aa9b6e796b5a1cd4dc1d8b0e5b22b28b439"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/model.py",
+          "stored": {
+            "bytes": 1026,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/model.py",
+            "sha256": "81a0959bf8c3358db080ec56b056d4a5fbb402538a49b3c24623e9bc16d3a5d0"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 384,
+          "name": ".model-_z9e6u01/model.safetensors",
+          "stored": {
+            "bytes": 204795180,
+            "path": "shared/package-files/40/4006c7d2e920ef4ef03a2a29284e2c643aea67fefbab2b57a48f2b40d6a11d65/model.safetensors",
+            "sha256": "4006c7d2e920ef4ef03a2a29284e2c643aea67fefbab2b57a48f2b40d6a11d65"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/model_config.json",
+          "stored": {
+            "bytes": 928,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/model_config.json",
+            "sha256": "2fb673e05bb133de794711ab5e8c31c77226cf8154b321fb8c4289519d8aa8ea"
+          }
+        },
+        {
+          "kind": "file",
+          "mode": 420,
+          "name": ".model-_z9e6u01/predict.py",
+          "stored": {
+            "bytes": 5316,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/.model-_z9e6u01/predict.py",
+            "sha256": "8537d05cc8c02f1c85633524b04ec6b7ef5bfb82ab41a6fcbacd220ffaa269cf"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "README.md",
+          "target": "current/README.md"
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "current",
+          "target": ".model-_z9e6u01"
+        },
+        {
+          "kind": "file",
+          "mode": 493,
+          "name": "infer.sh",
+          "stored": {
+            "bytes": 137,
+            "path": "tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/submissions/S024/infer.sh",
+            "sha256": "1da6bc5f6c60564632c37ecf5d85c1dc4de59b7fb43d30fdf24ce8f5a08554ea"
+          }
+        },
+        {
+          "kind": "symlink",
+          "mode": 511,
+          "name": "model_config.json",
+          "target": "current/model_config.json"
+        }
+      ],
+      "fingerprint": "178d78e671d2b0567d9d241c9438b726aefe7d78b6b6cd92e8bf6945344d7448",
+      "fingerprint_algorithm": "runner/runtime.py names-modes-contents SHA256"
+    }
+  },
+  "reasoning": "xhigh",
+  "research_resources_requested": [
+    {
+      "cpuCount": 22,
+      "gpuCount": 1,
+      "memory": "224GiB",
+      "sharedMemory": "32GiB"
+    }
+  ],
+  "research_seconds": 172800,
+  "run": "protein-folding-prediction-astra-xhigh-1h100-48h-20261020b",
+  "schema": "science-speedrun-results/v1",
+  "snapshots": [
+    {
+      "evaluation": "S001",
+      "evaluation_key": "reviewed-inference-v1:5132bd750626e2464693bf7a6709310a46f78f41c486529fcefad6c423fee2d0",
+      "original_package_fingerprint": "5b5eb00a38542b26d878f3e9048c44e41f00019c2dafbef1a1ba3973280a896e",
+      "package": "S001",
+      "recorded_snapshot_seconds": 120,
+      "research_seconds": 120,
+      "score_origin": "measured",
+      "snapshot": "S001"
+    },
+    {
+      "evaluation": "S002",
+      "evaluation_key": "reviewed-inference-v1:a275d53516fbf75738de5816a91425d4b58e6e55495df24c199a0622ae9e789b",
+      "original_package_fingerprint": "367efd3b96ab6daaa5126b8743a85f09b93936cfc5ebc00fa536cd8d96f03fe4",
+      "package": "S002",
+      "recorded_snapshot_seconds": 241,
+      "research_seconds": 241,
+      "score_origin": "measured",
+      "snapshot": "S002"
+    },
+    {
+      "evaluation": "S003",
+      "evaluation_key": "reviewed-inference-v1:c11324c59eec3d99324a0759497192301a8e6a38ecae11174b0f9cc65a534342",
+      "original_package_fingerprint": "bbeb05cf3d9a7f31f09a48c7a655a959904a050ee48504a1ae594892f6677157",
+      "package": "S003",
+      "recorded_snapshot_seconds": 301,
+      "research_seconds": 301,
+      "score_origin": "measured",
+      "snapshot": "S003"
+    },
+    {
+      "evaluation": "S004",
+      "evaluation_key": "reviewed-inference-v1:3c6112d312e92a3680b6918f72915dcc3a76d8d0b653d4e834b1a6258e75f913",
+      "original_package_fingerprint": "5bf2fc22c1ff8cc8114b32ab66608a09b70d45c4ab54efdbc9d32f9ec35f234c",
+      "package": "S004",
+      "recorded_snapshot_seconds": 7084,
+      "research_seconds": 7084,
+      "score_origin": "measured",
+      "snapshot": "S004"
+    },
+    {
+      "evaluation": "S004",
+      "evaluation_key": "reviewed-inference-v1:3c6112d312e92a3680b6918f72915dcc3a76d8d0b653d4e834b1a6258e75f913",
+      "original_package_fingerprint": "70a36c570d80ac44d606bc3b0095da9dcae0ec8c950cc1f57ec51737e7a622e1",
+      "package": "S004",
+      "recorded_snapshot_seconds": 15670,
+      "research_seconds": 15670,
+      "score_origin": "reused",
+      "snapshot": "S005"
+    },
+    {
+      "evaluation": "S006",
+      "evaluation_key": "reviewed-inference-v1:c18378ac03f20a69fdcc6c1f03a8f7d2ccf35baf42dfcc559b35de4be6dc71ed",
+      "original_package_fingerprint": "fab028219be689cfcbe35e4cd482d285dde1f383ea3374484d5a882d7093c057",
+      "package": "S006",
+      "recorded_snapshot_seconds": 15730,
+      "research_seconds": 15730,
+      "score_origin": "measured",
+      "snapshot": "S006"
+    },
+    {
+      "evaluation": "S006",
+      "evaluation_key": "reviewed-inference-v1:c18378ac03f20a69fdcc6c1f03a8f7d2ccf35baf42dfcc559b35de4be6dc71ed",
+      "original_package_fingerprint": "d4881cc578ec88dd733f216444fa789e25394b86e8f1a76e5caccbe4245a580c",
+      "package": "S006",
+      "recorded_snapshot_seconds": 16870,
+      "research_seconds": 16870,
+      "score_origin": "reused",
+      "snapshot": "S007"
+    },
+    {
+      "evaluation": "S006",
+      "evaluation_key": "reviewed-inference-v1:c18378ac03f20a69fdcc6c1f03a8f7d2ccf35baf42dfcc559b35de4be6dc71ed",
+      "original_package_fingerprint": "ee72dcde8a4feed924959045d7076d5385b034f128a296ab6a82914b0b8d17d6",
+      "package": "S006",
+      "recorded_snapshot_seconds": 19092,
+      "research_seconds": 19092,
+      "score_origin": "reused",
+      "snapshot": "S008"
+    },
+    {
+      "evaluation": "S009",
+      "evaluation_key": "reviewed-inference-v1:b48b921f861595982a9178e884f2a8c1f9cde515c04b69a3cfdfbd76d33bc2d2",
+      "original_package_fingerprint": "3f631312e94306eed4541bf471dc729f8b3cf0a8e226c4e651b0e2f5225719e7",
+      "package": "S009",
+      "recorded_snapshot_seconds": 22393,
+      "research_seconds": 22393,
+      "score_origin": "measured",
+      "snapshot": "S009"
+    },
+    {
+      "evaluation": "S009",
+      "evaluation_key": "reviewed-inference-v1:b48b921f861595982a9178e884f2a8c1f9cde515c04b69a3cfdfbd76d33bc2d2",
+      "original_package_fingerprint": "04134d89c0e87fa54baf442dc72bfe520ae7c52a421bcb01b097c4911f4ab102",
+      "package": "S009",
+      "recorded_snapshot_seconds": 22694,
+      "research_seconds": 22694,
+      "score_origin": "reused",
+      "snapshot": "S010"
+    },
+    {
+      "evaluation": "S011",
+      "evaluation_key": "reviewed-inference-v1:4a6ba2e4aedf92602ad12590e693cbc7b1a53a9a4c86f4a32146124247ab7217",
+      "original_package_fingerprint": "65b424d3bf3ba4e1451c2d318eb90bb54605ae4ef74f5b65ce700bbe097754bc",
+      "package": "S011",
+      "recorded_snapshot_seconds": 25515,
+      "research_seconds": 25515,
+      "score_origin": "measured",
+      "snapshot": "S011"
+    },
+    {
+      "evaluation": "S012",
+      "evaluation_key": "reviewed-inference-v1:5ca6adf4ec1e91427ba9376abbcbd1e9069f7bc15abdc9103fb267733424a055",
+      "original_package_fingerprint": "2ecfc386c4531964ebf102d5c4008eb811a7b9c155afd2e86062ca73064aa0b6",
+      "package": "S012",
+      "recorded_snapshot_seconds": 39321,
+      "research_seconds": 39321,
+      "score_origin": "measured",
+      "snapshot": "S012"
+    },
+    {
+      "evaluation": "S012",
+      "evaluation_key": "reviewed-inference-v1:5ca6adf4ec1e91427ba9376abbcbd1e9069f7bc15abdc9103fb267733424a055",
+      "original_package_fingerprint": "7af2d7842f8ad87f2fba032a9adb649bf4d59b278ba742c3de1f4fba6845b2ef",
+      "package": "S012",
+      "recorded_snapshot_seconds": 41242,
+      "research_seconds": 41242,
+      "score_origin": "reused",
+      "snapshot": "S013"
+    },
+    {
+      "evaluation": "S014",
+      "evaluation_key": "reviewed-inference-v1:a29ae3d4d81ea414fee1e821040f1d8cd347ce992ab60bb857c245ae6bcd6203",
+      "original_package_fingerprint": "ef29c03dcbe93e6aa769159f8cdcf390f9eff0e20938a17a7bb4bc56011d0f6f",
+      "package": "S014",
+      "recorded_snapshot_seconds": 44363,
+      "research_seconds": 44363,
+      "score_origin": "measured",
+      "snapshot": "S014"
+    },
+    {
+      "evaluation": "S014",
+      "evaluation_key": "reviewed-inference-v1:a29ae3d4d81ea414fee1e821040f1d8cd347ce992ab60bb857c245ae6bcd6203",
+      "original_package_fingerprint": "a143b493c0299d5379a4438b8f4298ba65baea4c2ec53e25ce6389424da62385",
+      "package": "S014",
+      "recorded_snapshot_seconds": 45864,
+      "research_seconds": 45864,
+      "score_origin": "reused",
+      "snapshot": "S015"
+    },
+    {
+      "evaluation": "S016",
+      "evaluation_key": "reviewed-inference-v1:55fc2418503dc3076e6125c82d50e986b08c74fdd4ac4d4ddb2180a6cc4aad76",
+      "original_package_fingerprint": "b93b585d214979002f8f3ecad334b326ba522426bbf97d706ce41cf6986495c0",
+      "package": "S016",
+      "recorded_snapshot_seconds": 49285,
+      "research_seconds": 49285,
+      "score_origin": "measured",
+      "snapshot": "S016"
+    },
+    {
+      "evaluation": "S017",
+      "evaluation_key": "reviewed-inference-v1:338e673e0371404e7658dce50b54675f923110794e920a06c1163be3d9df1682",
+      "original_package_fingerprint": "4072baf8a87249389aa2e9f36b270754deefec8ae91844e94b7f95340728054d",
+      "package": "S017",
+      "recorded_snapshot_seconds": 75457,
+      "research_seconds": 75457,
+      "score_origin": "measured",
+      "snapshot": "S017"
+    },
+    {
+      "evaluation": "S018",
+      "evaluation_key": "reviewed-inference-v1:2ab7c500b469d3963aee815a965ef864ba9e2264a3ca0b7a09c80f6218446368",
+      "original_package_fingerprint": "5bdc556952dc55461a0712dbdc2f9ae2b1bf3f72d35036eebc4cc4a7156d913c",
+      "package": "S018",
+      "recorded_snapshot_seconds": 79599,
+      "research_seconds": 79599,
+      "score_origin": "measured",
+      "snapshot": "S018"
+    },
+    {
+      "evaluation": "S019",
+      "evaluation_key": "reviewed-inference-v1:95330f9f4a02de9cbff3063e5ee515cc2401413197acfd7df846a54f0e84a4d9",
+      "original_package_fingerprint": "e3b95171018850f4bbcdcaf7d428b82c30cfca7575724e301ff964e252fac16e",
+      "package": "S019",
+      "recorded_snapshot_seconds": 88662,
+      "research_seconds": 88662,
+      "score_origin": "measured",
+      "snapshot": "S019"
+    },
+    {
+      "evaluation": "S020",
+      "evaluation_key": "reviewed-inference-v1:074b4130af78a4e8ddc83be58fa527c7900dbd8e909c4660bbcf6bd1ad86d519",
+      "original_package_fingerprint": "6d5ba7b5b26665c52acd5e1c1e23c16ae178986cef079145e91481c954f6fd01",
+      "package": "S020",
+      "recorded_snapshot_seconds": 109088,
+      "research_seconds": 109088,
+      "score_origin": "measured",
+      "snapshot": "S020"
+    },
+    {
+      "evaluation": "S021",
+      "evaluation_key": "reviewed-inference-v1:20da91b7ce6d52f35fb9fdad966b88c5ef714e284c19be6f7502bbdb6dcc4209",
+      "original_package_fingerprint": "4ff0883916224736bc7a5625f5de7796523e13546ab2d92dcd87ecf5b1d4d0f6",
+      "package": "S021",
+      "recorded_snapshot_seconds": 117551,
+      "research_seconds": 117551,
+      "score_origin": "measured",
+      "snapshot": "S021"
+    },
+    {
+      "evaluation": "S022",
+      "evaluation_key": "reviewed-inference-v1:21a85e467312af259234f755c8b7444b8cf5ad7919b7d12a3ac21592c5bf3fe7",
+      "original_package_fingerprint": "31c63dc04eab6066d6698884079fdf6df1b2fdfc158df80bfce3d05844671254",
+      "package": "S022",
+      "recorded_snapshot_seconds": 123854,
+      "research_seconds": 123854,
+      "score_origin": "measured",
+      "snapshot": "S022"
+    },
+    {
+      "evaluation": "S023",
+      "evaluation_key": "reviewed-inference-v1:5dbc8e943722053ca1c94e1ecf445f2aeb28a452d1c3edba448cf7cbece48609",
+      "original_package_fingerprint": "9259f87edd0f3d2c56e5fc932f5a7b3b100fc0ae5c9d728cc6d77d27a3b97e03",
+      "package": "S023",
+      "recorded_snapshot_seconds": 134238,
+      "research_seconds": 134238,
+      "score_origin": "measured",
+      "snapshot": "S023"
+    },
+    {
+      "evaluation": "S024",
+      "evaluation_key": "reviewed-inference-v1:d7976e4759c3b00d03280b8cc07cb3261e91ebd0d7e29696b4cdd2052694f3f6",
+      "original_package_fingerprint": "178d78e671d2b0567d9d241c9438b726aefe7d78b6b6cd92e8bf6945344d7448",
+      "package": "S024",
+      "recorded_snapshot_seconds": 135318,
+      "research_seconds": 135318,
+      "score_origin": "measured",
+      "snapshot": "S024"
+    }
+  ],
+  "source_commit": "486c1defa7954e2402181d2b3bcd2d3a2d22e108",
+  "task": "protein-folding-prediction"
+}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/codex.stderr b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/codex.stderr
new file mode 100644
index 0000000000000000000000000000000000000000..73207cc2a061ceb0cd1ad1b990cbba61f77c036e
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/codex.stderr
@@ -0,0 +1,9 @@
+2026-10-21T04:06:05.865100Z ERROR codex_core::tools::router: error=exec_command failed: CreateProcess { message: "Rejected(\"Failed to create unified exec process: No such file or directory (os error 2)\")" }
+2026-10-21T16:48:17.641911Z ERROR codex_core::tools::router: error=write_stdin failed: Unknown process id 38991
+2026-10-22T02:14:25.207502Z ERROR codex_core::tools::router: error=write_stdin failed: Unknown process id 40647
+2026-10-22T03:00:04.133553Z ERROR codex_core::tools::router: error=exec_command failed: CreateProcess { message: "Rejected(\"Failed to create unified exec process: No such file or directory (os error 2)\")" }
+2026-10-22T03:35:30.806556Z ERROR codex_core::tools::router: error=exec_command failed: CreateProcess { message: "Rejected(\"Failed to create unified exec process: No such file or directory (os error 2)\")" }
+2026-10-22T11:05:37.096374Z ERROR codex_core::tools::router: error=write_stdin failed: Unknown process id 13980
+2026-10-22T16:28:25.470792Z ERROR codex_core::tools::router: error=write_stdin failed: Unknown process id 82314
+2026-10-22T21:30:07.258239Z ERROR codex_core::tools::router: error=write_stdin failed: Unknown process id 98918
+2026-10-22T21:30:07.258316Z ERROR codex_core::tools::router: error=write_stdin failed: Unknown process id 21215
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/preflight.jsonl b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/preflight.jsonl
new file mode 100644
index 0000000000000000000000000000000000000000..23ca6e1338c4afa1cd8a4355c02e479e1e3dd7c5
--- /dev/null
+++ b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/preflight.jsonl
@@ -0,0 +1,8 @@
+{"type":"thread.started","thread_id":"01a165f6-4a4d-7fc3-a61a-982d62dbb102"}
+{"type":"item.completed","item":{"id":"item_0","type":"error","message":"`[features].use_legacy_landlock` is deprecated and will be removed soon. (Remove this setting to stop opting into the legacy Linux sandbox behavior.)"}}
+{"type":"turn.started"}
+{"type":"item.completed","item":{"id":"item_1","type":"agent_message","text":"I’ll run the environment check as requested.\n"}}
+{"type":"item.started","item":{"id":"item_2","type":"command_execution","command":"/bin/sh -lc 'python /opt/speedrun/probe.py'","aggregated_output":"","exit_code":null,"status":"in_progress"}}
+{"type":"item.completed","item":{"id":"item_2","type":"command_execution","command":"/bin/sh -lc 'python /opt/speedrun/probe.py'","aggregated_output":"{\"gpu_name\": \"NVIDIA H100 80GB HBM3\", \"visible_gpus\": 1, \"cuda_ok\": true, \"imports_ok\": true, \"network_blocked\": true, \"ipv4_blocked\": true, \"ipv6_blocked\": true, \"unix_ipc_ok\": true, \"network_error\": \"[Errno 1] Operation not permitted\", \"task\": \"protein-folding-prediction\", \"development_data_ok\": true, \"data_readonly\": true, \"development_mounts\": [\"manifests\", \"objects\", \"features\", \"foldbench\", \"models\"], \"evaluation_roles_absent\": true, \"research_storage_free_bytes\": 2926681313280, \"cpu_affinity_count\": 180, \"atomic_exchange_ok\": true, \"gpu_device_access_isolated\": true, \"denied_gpu_device_count\": 0}\n","exit_code":0,"status":"completed"}}
+{"type":"item.completed","item":{"id":"item_3","type":"agent_message","text":"PREFLIGHT_OK"}}
+{"type":"turn.completed","usage":{"input_tokens":32544,"cached_input_tokens":21462,"cache_write_input_tokens":11073,"output_tokens":103,"reasoning_output_tokens":0}}
diff --git a/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/preflight.stderr b/tasks/protein-folding-prediction/protein-folding-prediction-astra-xhigh-1h100-48h-20261020b/logs/preflight.stderr
new file mode 100644
index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391