morgul10 commited on
Commit
fc70ceb
·
verified ·
1 Parent(s): 38a9d80

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +29 -1
README.md CHANGED
@@ -11,4 +11,32 @@ tags:
11
  pretty_name: MoleculeNet Tox21
12
  size_categories:
13
  - 1K<n<10K
14
- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
11
  pretty_name: MoleculeNet Tox21
12
  size_categories:
13
  - 1K<n<10K
14
+ ---
15
+
16
+ # MoleculeNet Tox21
17
+
18
+ Tox21 dataset [[1]](#1), part of MoleculeNet [[2]](#2) benchmark. It is intended to be used through
19
+ [scikit-fingerprints](https://github.com/scikit-fingerprints/scikit-fingerprints) library.
20
+
21
+ The task is to predict 12 toxicity targets, including nuclear receptors and stress response pathways. All tasks are binary.
22
+
23
+ Note that targets have missing values. Algorithms should be evaluated only on present labels. For training data, you may want to impute them, e.g. with zeros.
24
+
25
+ | **Characteristic** | **Description** |
26
+ |:------------------:|:------------------------:|
27
+ | Tasks | 12 |
28
+ | Task type | multitask classification |
29
+ | Total samples | 7831 |
30
+ | Recommended split | scaffold |
31
+ | Recommended metric | AUROC |
32
+
33
+ ## References
34
+ <a id="1">[1]</a>
35
+ Tox21 Challenge
36
+ https://tripod.nih.gov/tox21/challenge/
37
+
38
+ <a id="2">[2]</a>
39
+ Wu, Zhenqin, et al.
40
+ "MoleculeNet: a benchmark for molecular machine learning."
41
+ Chemical Science 9.2 (2018): 513-530
42
+ https://pubs.rsc.org/en/content/articlelanding/2018/sc/c7sc02664a