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pretty_name: MoleculeNet ToxCast
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size_categories:
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pretty_name: MoleculeNet ToxCast
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size_categories:
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# MoleculeNet ToxCast
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ToxCast dataset [[1]](#1), part of MoleculeNet [[2]](#2) benchmark. It is intended to be used through
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[scikit-fingerprints](https://github.com/scikit-fingerprints/scikit-fingerprints) library.
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The task is to predict 617 toxicity targets from a large library of compounds based on in vitro high-throughput screening. All tasks are binary.
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Note that targets have missing values. Algorithms should be evaluated only on present labels. For training data, you may want to impute them, e.g. with zeros.
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| **Characteristic** | **Description** |
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|:------------------:|:------------------------:|
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| Tasks | 617 |
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| Task type | multitask classification |
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| Total samples | 8576 |
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| Recommended split | scaffold |
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| Recommended metric | AUROC |
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## References
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<a id="1">[1]</a>
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Ann M. Richard et al.
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"ToxCast Chemical Landscape: Paving the Road to 21st Century Toxicology"
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Chem. Res. Toxicol. 2016, 29, 8, 1225–1251
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https://pubs.acs.org/doi/10.1021/acs.chemrestox.6b00135>
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<a id="2">[2]</a>
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Wu, Zhenqin, et al.
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"MoleculeNet: a benchmark for molecular machine learning."
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Chemical Science 9.2 (2018): 513-530
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https://pubs.rsc.org/en/content/articlelanding/2018/sc/c7sc02664a
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