Hugging Face's logo

Datasets:
sequencing
/
scg-protocols-v1

Modalities:
Document
Text
Formats:
text
Size:
10K - 100K
Libraries:
Datasets
Dataset card Data Studio Files
xet
 Community
1
seqmachines commited on
Commit
59f4976
·
0 Parent(s):

Duplicate from seqmachines/scg-protocols-v1

Browse files
Files changed (38) hide show
  1. .gitattributes +91 -0
  2. 10x_chromium_3_feature_barcoding/10xChromium3fb.pdf +3 -0
  3. 10x_chromium_3_gene_expression_v4/10xChromium3v4.pdf +3 -0
  4. 10x_chromium_single_cell_atac_v2/10xChromium_scATACv2.pdf +3 -0
  5. cel_seq/CEL-Seq_paper.pdf +3 -0
  6. cel_seq/CEL-Seq_protocol.pdf +3 -0
  7. ddseq_single_cell_3_rna_seq_kit/ddSEQ_3pRNA.pdf +3 -0
  8. dr_seq/DR-seq.pdf +3 -0
  9. drop_seq/drop-seq_paper.pdf +3 -0
  10. drop_seq/drop-seq_supp.pdf +3 -0
  11. indrop_v1/inDrop_paper.pdf +3 -0
  12. indrop_v1/inDrop_v1_supp.pdf +3 -0
  13. microwell_seq/Microwell-seq.pdf +3 -0
  14. microwell_seq/Microwell-seq_supp1.xlsx +0 -0
  15. microwell_seq/Microwell-seq_supp2.xlsx +0 -0
  16. petri_seq/PETRI-seq.xlsx +0 -0
  17. petri_seq/PETRI-seq_paper.pdf +3 -0
  18. petri_seq/PETRI-seq_protocol.pdf +3 -0
  19. pip_seq_v4/PIP-seqv4.pdf +3 -0
  20. s3_atac/s3-ATAC.pdf +3 -0
  21. s3_atac/s3-ATAC.xlsx +3 -0
  22. scdamid/scDamID.pdf +3 -0
  23. scdamid/scDamID_paper.pdf +3 -0
  24. sci_atac_seq/sci-ATAC-seq.xlsx +0 -0
  25. sci_atac_seq/sci-ATAC-seq_paper.pdf +3 -0
  26. sci_atac_seq/sci-ATAC-seq_supp.pdf +3 -0
  27. sci_rna_seq/paper.pdf +3 -0
  28. sci_rna_seq/supplementary.pdf +3 -0
  29. scrrbs/paper.pdf +3 -0
  30. scrrbs/scRRBS.pdf +3 -0
  31. seq_well_s3/SeqWell_S3_paper.pdf +3 -0
  32. seq_well_s3/SeqWell_S3_supp.pdf +3 -0
  33. share_seq/SHARE-seq.pdf +3 -0
  34. share_seq/SHARE-seq.xlsx +0 -0
  35. smart_seq/SMART-seq.pdf +3 -0
  36. split_seq/SPLiT-seq.xlsx +0 -0
  37. split_seq/SPLiT-seq_paper.pdf +3 -0
  38. split_seq/SPLiT-seq_supp.pdf +3 -0
.gitattributes ADDED
@@ -0,0 +1,91 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ *.7z filter=lfs diff=lfs merge=lfs -text
2
+ *.arrow filter=lfs diff=lfs merge=lfs -text
3
+ *.avro filter=lfs diff=lfs merge=lfs -text
4
+ *.bin filter=lfs diff=lfs merge=lfs -text
5
+ *.bz2 filter=lfs diff=lfs merge=lfs -text
6
+ *.ckpt filter=lfs diff=lfs merge=lfs -text
7
+ *.ftz filter=lfs diff=lfs merge=lfs -text
8
+ *.gz filter=lfs diff=lfs merge=lfs -text
9
+ *.h5 filter=lfs diff=lfs merge=lfs -text
10
+ *.joblib filter=lfs diff=lfs merge=lfs -text
11
+ *.lfs.* filter=lfs diff=lfs merge=lfs -text
12
+ *.lz4 filter=lfs diff=lfs merge=lfs -text
13
+ *.mds filter=lfs diff=lfs merge=lfs -text
14
+ *.mlmodel filter=lfs diff=lfs merge=lfs -text
15
+ *.model filter=lfs diff=lfs merge=lfs -text
16
+ *.msgpack filter=lfs diff=lfs merge=lfs -text
17
+ *.npy filter=lfs diff=lfs merge=lfs -text
18
+ *.npz filter=lfs diff=lfs merge=lfs -text
19
+ *.onnx filter=lfs diff=lfs merge=lfs -text
20
+ *.ot filter=lfs diff=lfs merge=lfs -text
21
+ *.parquet filter=lfs diff=lfs merge=lfs -text
22
+ *.pb filter=lfs diff=lfs merge=lfs -text
23
+ *.pickle filter=lfs diff=lfs merge=lfs -text
24
+ *.pkl filter=lfs diff=lfs merge=lfs -text
25
+ *.pt filter=lfs diff=lfs merge=lfs -text
26
+ *.pth filter=lfs diff=lfs merge=lfs -text
27
+ *.rar filter=lfs diff=lfs merge=lfs -text
28
+ *.safetensors filter=lfs diff=lfs merge=lfs -text
29
+ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
30
+ *.tar.* filter=lfs diff=lfs merge=lfs -text
31
+ *.tar filter=lfs diff=lfs merge=lfs -text
32
+ *.tflite filter=lfs diff=lfs merge=lfs -text
33
+ *.tgz filter=lfs diff=lfs merge=lfs -text
34
+ *.wasm filter=lfs diff=lfs merge=lfs -text
35
+ *.xz filter=lfs diff=lfs merge=lfs -text
36
+ *.zip filter=lfs diff=lfs merge=lfs -text
37
+ *.zst filter=lfs diff=lfs merge=lfs -text
38
+ *tfevents* filter=lfs diff=lfs merge=lfs -text
39
+ # Audio files - uncompressed
40
+ *.pcm filter=lfs diff=lfs merge=lfs -text
41
+ *.sam filter=lfs diff=lfs merge=lfs -text
42
+ *.raw filter=lfs diff=lfs merge=lfs -text
43
+ # Audio files - compressed
44
+ *.aac filter=lfs diff=lfs merge=lfs -text
45
+ *.flac filter=lfs diff=lfs merge=lfs -text
46
+ *.mp3 filter=lfs diff=lfs merge=lfs -text
47
+ *.ogg filter=lfs diff=lfs merge=lfs -text
48
+ *.wav filter=lfs diff=lfs merge=lfs -text
49
+ # Image files - uncompressed
50
+ *.bmp filter=lfs diff=lfs merge=lfs -text
51
+ *.gif filter=lfs diff=lfs merge=lfs -text
52
+ *.png filter=lfs diff=lfs merge=lfs -text
53
+ *.tiff filter=lfs diff=lfs merge=lfs -text
54
+ # Image files - compressed
55
+ *.jpg filter=lfs diff=lfs merge=lfs -text
56
+ *.jpeg filter=lfs diff=lfs merge=lfs -text
57
+ *.webp filter=lfs diff=lfs merge=lfs -text
58
+ # Video files - compressed
59
+ *.mp4 filter=lfs diff=lfs merge=lfs -text
60
+ *.webm filter=lfs diff=lfs merge=lfs -text
61
+ 10x_chromium_3_feature_barcoding/10xChromium3fb.pdf filter=lfs diff=lfs merge=lfs -text
62
+ 10x_chromium_3_gene_expression_v4/10xChromium3v4.pdf filter=lfs diff=lfs merge=lfs -text
63
+ 10x_chromium_single_cell_atac_v2/10xChromium_scATACv2.pdf filter=lfs diff=lfs merge=lfs -text
64
+ cel_seq/CEL-Seq_paper.pdf filter=lfs diff=lfs merge=lfs -text
65
+ cel_seq/CEL-Seq_protocol.pdf filter=lfs diff=lfs merge=lfs -text
66
+ ddseq_single_cell_3_rna_seq_kit/ddSEQ_3pRNA.pdf filter=lfs diff=lfs merge=lfs -text
67
+ dr_seq/DR-seq.pdf filter=lfs diff=lfs merge=lfs -text
68
+ drop_seq/drop-seq_paper.pdf filter=lfs diff=lfs merge=lfs -text
69
+ drop_seq/drop-seq_supp.pdf filter=lfs diff=lfs merge=lfs -text
70
+ indrop_v1/inDrop_paper.pdf filter=lfs diff=lfs merge=lfs -text
71
+ indrop_v1/inDrop_v1_supp.pdf filter=lfs diff=lfs merge=lfs -text
72
+ microwell_seq/Microwell-seq.pdf filter=lfs diff=lfs merge=lfs -text
73
+ petri_seq/PETRI-seq_paper.pdf filter=lfs diff=lfs merge=lfs -text
74
+ petri_seq/PETRI-seq_protocol.pdf filter=lfs diff=lfs merge=lfs -text
75
+ pip_seq_v4/PIP-seqv4.pdf filter=lfs diff=lfs merge=lfs -text
76
+ s3_atac/s3-ATAC.pdf filter=lfs diff=lfs merge=lfs -text
77
+ s3_atac/s3-ATAC.xlsx filter=lfs diff=lfs merge=lfs -text
78
+ scdamid/scDamID.pdf filter=lfs diff=lfs merge=lfs -text
79
+ scdamid/scDamID_paper.pdf filter=lfs diff=lfs merge=lfs -text
80
+ sci_atac_seq/sci-ATAC-seq_paper.pdf filter=lfs diff=lfs merge=lfs -text
81
+ sci_atac_seq/sci-ATAC-seq_supp.pdf filter=lfs diff=lfs merge=lfs -text
82
+ sci_rna_seq/paper.pdf filter=lfs diff=lfs merge=lfs -text
83
+ sci_rna_seq/supplementary.pdf filter=lfs diff=lfs merge=lfs -text
84
+ scrrbs/paper.pdf filter=lfs diff=lfs merge=lfs -text
85
+ scrrbs/scRRBS.pdf filter=lfs diff=lfs merge=lfs -text
86
+ seq_well_s3/SeqWell_S3_paper.pdf filter=lfs diff=lfs merge=lfs -text
87
+ seq_well_s3/SeqWell_S3_supp.pdf filter=lfs diff=lfs merge=lfs -text
88
+ share_seq/SHARE-seq.pdf filter=lfs diff=lfs merge=lfs -text
89
+ smart_seq/SMART-seq.pdf filter=lfs diff=lfs merge=lfs -text
90
+ split_seq/SPLiT-seq_paper.pdf filter=lfs diff=lfs merge=lfs -text
91
+ split_seq/SPLiT-seq_supp.pdf filter=lfs diff=lfs merge=lfs -text
10x_chromium_3_feature_barcoding/10xChromium3fb.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4b03b7d4448836f839e0cbedb8012e402a99b152b6a23a8046fabb0c5381a819
3
+ size 4130627
10x_chromium_3_gene_expression_v4/10xChromium3v4.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6661eb5da6e604436675db567467f859d22f3d901afdb45f13b03a65f42589fb
3
+ size 14666465
10x_chromium_single_cell_atac_v2/10xChromium_scATACv2.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bd4f79e69dc1768e0eb1ba0dc202d87a0998b64a4e51eae5665ea8704b002579
3
+ size 3902003
cel_seq/CEL-Seq_paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b9daf7249858227bd6ff4d68ab5f777e1cb0dc1bb5a2b731be058cad45039a83
3
+ size 1319873
cel_seq/CEL-Seq_protocol.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2cbc831215ee3f8473219a5c08d6871ae7fe49c34c9f1e3bf70b592c6a5ecf6e
3
+ size 734833
ddseq_single_cell_3_rna_seq_kit/ddSEQ_3pRNA.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:35a78f75c3baf198214338b3ede9741e186ae45bcf792d756b976a0e88512c0a
3
+ size 11030668
dr_seq/DR-seq.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c6cbc1210a713990c7b6d421ebd768a49ec7a9e7469a6bc9b99248d26bc817b8
3
+ size 677271
drop_seq/drop-seq_paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:84179dc8bfce57a3195ebe5d53ed1257883d9e18111cef6a2dcd90dfadae92b7
3
+ size 3549282
drop_seq/drop-seq_supp.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7b63216599c518dccd63c484cb6bc448fa181e8d9ddbdf0f2ac788b12296442d
3
+ size 714947
indrop_v1/inDrop_paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4e05dad25cd55b64b1d7c98b081a0cee51c038f0502ede21253cd3cfe6acd506
3
+ size 2132179
indrop_v1/inDrop_v1_supp.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8f9c9a3c42a2a608fa809bb2cdbf9ef04a4217fb891892345f3bc3ae1728dda8
3
+ size 649786
microwell_seq/Microwell-seq.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:64b440bc37f6cb00700a6ada5258d3fff0a64ea790e04478d895105a9714a38e
3
+ size 15109140
microwell_seq/Microwell-seq_supp1.xlsx ADDED
Binary file (16.4 kB). View file
 
microwell_seq/Microwell-seq_supp2.xlsx ADDED
Binary file (12.1 kB). View file
 
petri_seq/PETRI-seq.xlsx ADDED
Binary file (26 kB). View file
 
petri_seq/PETRI-seq_paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6fca897787f341946baed886faad10f0cd6877bd110ee84f1c5518a46baa6b7c
3
+ size 13084898
petri_seq/PETRI-seq_protocol.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8c1b4caaf6b8a300beb7901dacda9656015c5868c8fdb2fd20eaf44823a2bdc1
3
+ size 450185
pip_seq_v4/PIP-seqv4.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9299bdb6ea132d575413e55d0203a094ccfe7cb7942a2d85136bae1994874bb6
3
+ size 3098641
s3_atac/s3-ATAC.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1234d1e43ed42f74d771a141c3731585b39251f3ffc4614413ab3d0672d164ab
3
+ size 5610522
s3_atac/s3-ATAC.xlsx ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3b59fe6bd20c2bd1d123c830fcd8507112b2df34633519685a61c75a9ec0ae89
3
+ size 597187
scdamid/scDamID.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:80a616cc1df0614cd32ac916cf6d55a473ccde9ed3fb6829d04b85c4e13c937c
3
+ size 384037
scdamid/scDamID_paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:15207de0a14eaad90d99b0a9fea5aad226db62b9ed702bae0cc16abbf7707201
3
+ size 4801535
sci_atac_seq/sci-ATAC-seq.xlsx ADDED
Binary file (11.2 kB). View file
 
sci_atac_seq/sci-ATAC-seq_paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bcf526797a5efa310c8b5edab0c0b6c84650b36f0cd4c7aba23a82fe67d898e3
3
+ size 1533598
sci_atac_seq/sci-ATAC-seq_supp.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1c6fb4ba5a9558de4490cb0c6d7a948a43fffe9c33e87a650378dd632205d1b0
3
+ size 2515226
sci_rna_seq/paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:31fbcab82aa907036f6641f7e66bcba0a9cf06ecfefcc365bcc66e5eb6dc3c6a
3
+ size 1227414
sci_rna_seq/supplementary.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4fa14ce56e305c1369ca1ecc5207d77cb2e9488f2c8e8c71ca4125ce17bf2019
3
+ size 6092712
scrrbs/paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4d31ab24e81f0f3f5f7547a6cf030bbb8ee19532b191da79604fa151be5a4651
3
+ size 1414238
scrrbs/scRRBS.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c3521a628635553e2de9169214b731a676bae6dcf9f11467d5014aad8fbcbc30
3
+ size 1259058
seq_well_s3/SeqWell_S3_paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b634dc0f285332de12725f34dba11715720cacf31d84982d8f52a9a01d07f2a7
3
+ size 7432965
seq_well_s3/SeqWell_S3_supp.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0de4dfbdf46f494f68387b80bd122e3614006039257340a94dba75718a870635
3
+ size 74863156
share_seq/SHARE-seq.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:be7253756f1f3567daa7270433b1ce00306b42da7560978682bc5ea4349b5083
3
+ size 15043532
share_seq/SHARE-seq.xlsx ADDED
Binary file (24.9 kB). View file
 
smart_seq/SMART-seq.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:48a390025bcb3786a8f0b975e352ed4aa881d5b9924c375d58b9ffa6c242ac34
3
+ size 942068
split_seq/SPLiT-seq.xlsx ADDED
Binary file (21.8 kB). View file
 
split_seq/SPLiT-seq_paper.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f374224c2a8533eef5bf47f313812d41d69dd2bee6a87c0a0f0525858f201fc0
3
+ size 2207960
split_seq/SPLiT-seq_supp.pdf ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:79bd5601be71f1a052ed5816740ea842e29a204f4f58f4ab5badac02c1c0c9fc
3
+ size 4294887