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import os
import mat73
import torch
import numpy as np
import json
import h5py
def read_h5(path):
with h5py.File(path, 'r') as f:
frames = np.array(f['data'])
return frames
def process_captured_data(files_path, savepath):
for file in os.listdir(files_path):
if file[-3:] == "mat" and (file[:-3]+"pt") not in os.listdir(savepath):
filepath = os.path.join(files_path, file)
rgba = mat73.loadmat(filepath)["transient"].transpose(1, 2, 0)[..., :][..., None]
rgba = np.flip(np.flip(rgba, 0), 1)
for i in range(3):
rgba = (rgba[1::2, ::2] + rgba[::2, ::2] + rgba[1::2, 1::2] + rgba[::2, 1::2])/4
torch.save(rgba, os.path.join(savepath, file[:-3]+"pt"))
def bundle_rays(pathToH5s, outputPath, trainJsonPath):
with open(trainJsonPath, "r") as fp:
meta = json.load(fp)
train_fnames = []
for i in range(len(meta["frames"])):
frame = meta["frames"][i]
fname = frame["filepath"][:-2]+"h5"
train_fnames.append(fname)
frames = read_h5(os.path.join(pathToH5s, train_fnames[0]))
w = frames.shape[0]
h = frames.shape[1]
bins = frames.shape[2]
x = np.linspace(0, h-1, h)
y = np.linspace(0, w-1, w)
X, Y = np.meshgrid(x, y)
if len(frames.shape) == 4:
channels = 3
else:
channels = 1
num_train_files = len(train_fnames)
data_array = np.zeros((w*h*num_train_files, bins, channels), dtype=np.float32)
x_array = np.zeros(w*h*num_train_files)
y_array = np.zeros(w*h*num_train_files)
file_prefix_array = np.zeros(w*h*num_train_files)
for ind, file in enumerate(train_fnames):
print("Opening: " + file)
frames = read_h5(os.path.join(pathToH5s, file))
frames = frames.reshape(-1, frames.shape[2], frames.shape[3])
data_array[ind*w*h:(ind+1)*w*h] = frames[..., :3]
x_array[ind*w*h:(ind+1)*w*h] = X.flatten()
y_array[ind*w*h:(ind+1)*w*h] = Y.flatten()
file_prefix_array[ind*w*h:(ind+1)*w*h] = ind
p = np.random.permutation(data_array.shape[0])
data_array = data_array[p]
x_array = x_array[p]
y_array = y_array[p]
file_prefix_array = file_prefix_array[p]
print("Outputting to files")
file = h5py.File(os.path.join(outputPath, "samples.h5"), 'w')
dataset = file.create_dataset(
"dataset", data_array.shape, dtype='f', data=data_array
)
file.close()
file = h5py.File(os.path.join(outputPath, "x.h5"), 'w')
dataset = file.create_dataset(
"dataset", x_array.shape, dtype='f', data=x_array
)
file.close()
file = h5py.File(os.path.join(outputPath, "y.h5"), 'w')
dataset = file.create_dataset(
"dataset", y_array.shape, dtype='f', data=y_array
)
file.close()
file = h5py.File(os.path.join(outputPath, "file_indices.h5"), 'w')
dataset = file.create_dataset(
"dataset", file_prefix_array.shape, dtype='f', data=file_prefix_array
)
file.close()
def bundle_rays_cap(pathToH5s, outputPath, trainJsonPath):
with open(trainJsonPath, "r") as fp:
meta = json.load(fp)
train_fnames = []
for i in range(len(meta["frames"])):
frame = meta["frames"][i]
fname = frame["filepath"][:-2].split("/")[-1]+"mat"
train_fnames.append(fname)
# frames = read_h5_dataset(os.path.join(pathToH5s, train_fnames[0]))
frames = mat73.loadmat(os.path.join(pathToH5s, train_fnames[0]))["transient"].transpose(1, 2, 0)
w = frames.shape[0]
h = frames.shape[1]
# bins = frames.shape[2]
bins = 3000
x = np.linspace(0, h-1, h)
y = np.linspace(0, w-1, w)
X, Y = np.meshgrid(x, y)
# if len(frames.shape) == 4:
# channels = 3
# else:
channels = 1
num_train_files = len(train_fnames)
data_array = np.zeros((w*h*num_train_files, bins, channels), dtype=np.float32)
x_array = np.zeros(w*h*num_train_files)
y_array = np.zeros(w*h*num_train_files)
file_prefix_array = np.zeros(w*h*num_train_files)
for ind, file in enumerate(train_fnames):
print("Opening: " + file)
# frames = read_h5_dataset(os.path.join(pathToH5s, file))
frames = mat73.loadmat(os.path.join(pathToH5s, file))["transient"].transpose(1, 2, 0)
frames = frames.reshape(-1, frames.shape[2])
data_array[ind*w*h:(ind+1)*w*h] = frames[..., :bins, None]
# del frames
x_array[ind*w*h:(ind+1)*w*h] = X.flatten()
y_array[ind*w*h:(ind+1)*w*h] = Y.flatten()
file_prefix_array[ind*w*h:(ind+1)*w*h] = ind
p = np.random.permutation(data_array.shape[0])
data_array = data_array[p]
x_array = x_array[p]
y_array = y_array[p]
file_prefix_array = file_prefix_array[p]
print("Outputting to files")
file = h5py.File(os.path.join(outputPath, "samples.h5"), 'w')
dataset = file.create_dataset(
"dataset", data_array.shape, dtype='f', data=data_array
)
file.close()
file = h5py.File(os.path.join(outputPath, "x.h5"), 'w')
dataset = file.create_dataset(
"dataset", x_array.shape, dtype='f', data=x_array
)
file.close()
file = h5py.File(os.path.join(outputPath, "y.h5"), 'w')
dataset = file.create_dataset(
"dataset", y_array.shape, dtype='f', data=y_array
)
file.close()
file = h5py.File(os.path.join(outputPath, "file_indices.h5"), 'w')
dataset = file.create_dataset(
"dataset", file_prefix_array.shape, dtype='f', data=file_prefix_array
)
file.close()
if __name__=="__main__":
pass