File size: 918 Bytes
432d7ec |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 |
#!/bin/bash
#SBATCH -G 1
#SBATCH -J sample_esm
source /home/si264/anaconda3/etc/profile.d/conda.sh
conda activate proera
export CUDA_VISIBLE_DEVICES=7
# Define the directory containing subdirectories
target="ParD3" # Replace with your actual target string if needed
BASE_DIR="/home/scratch/group_scratch/era/directed_evolution/040325ReplicateAlignmentRuns/$target/lightning_logs"
# Get a sorted list of subdirectories
subdirs=($(ls -d "$BASE_DIR"/*/ | sort))
replicates=(0 3 8)
# Run the script 10 times
for i in {0..9}; do
# Extract the version number (subdirectory name)
version_number=$(basename "${subdirs[$i]}")
replicate="${replicates[$i]}"
# Run the Python script with the specified arguments
python sample_esm.py \
--target $target \
--num_samples 96 \
--alignment_round 3 \
--version_number "$version_number" \
--replicate "$replicate"
done |