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Browse files- results_new/drift_merged_tvae.csv +15 -15
- results_new/drift_merged_tvae_lag2.csv +15 -15
- results_new/drift_merged_vae.csv +15 -15
- results_new/drift_merged_vae_lag2.csv +15 -15
- results_new/drift_scores_tvae_h1n1.csv +17 -17
- results_new/drift_scores_tvae_h1n1_lag2.csv +16 -16
- results_new/drift_scores_tvae_h3n2.csv +17 -17
- results_new/drift_scores_tvae_h3n2_lag2.csv +16 -16
- results_new/drift_scores_vae_h1n1.csv +17 -17
- results_new/drift_scores_vae_h1n1_lag2.csv +16 -16
- results_new/drift_scores_vae_h3n2.csv +17 -17
- results_new/drift_scores_vae_h3n2_lag2.csv +16 -16
- results_new/hamming_baseline_h3n2.csv +16 -16
- results_new/hamming_baseline_h3n2_lag2.csv +16 -16
- results_new/latent_diversity_tvae_h3n2.csv +18 -18
- results_new/latent_diversity_vae_h3n2.csv +18 -18
- results_new/loo_cv_vae.csv +15 -15
- results_new/sirc_params_tvae.csv +5 -5
- results_new/sirc_params_vae.csv +5 -5
- results_new/sirc_params_vae_lag2.csv +5 -5
- results_new/sirc_simulation_tvae.csv +21 -13
- results_new/sirc_simulation_vae.csv +21 -13
- results_new/sirc_simulation_vae_lag2.csv +21 -13
results_new/drift_merged_tvae.csv
CHANGED
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@@ -1,16 +1,16 @@
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| 1 |
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results_new/drift_merged_tvae_lag2.csv
CHANGED
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@@ -1,16 +1,16 @@
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results_new/drift_merged_vae.csv
CHANGED
|
@@ -1,16 +1,16 @@
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|
| 1 |
season,pct_h1n1,pct_h3n2,hosp_rate_overall,covid_excluded,drift_h1n1,drift_h3n2,drift_h1n1_raw,drift_h3n2_raw,drift_blended,blend_method
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results_new/drift_merged_vae_lag2.csv
CHANGED
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@@ -1,16 +1,16 @@
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| 1 |
season,pct_h1n1,pct_h3n2,hosp_rate_overall,covid_excluded,drift_h1n1,drift_h3n2,drift_h1n1_raw,drift_h3n2_raw,drift_blended,blend_method
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results_new/drift_scores_tvae_h1n1.csv
CHANGED
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@@ -1,18 +1,18 @@
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| 1 |
season,drift_raw,n_sequences,drift_norm
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-
2009-10,
|
| 3 |
-
2010-11,
|
| 4 |
-
2011-12,
|
| 5 |
-
2012-13,
|
| 6 |
-
2013-14,
|
| 7 |
-
2014-15,
|
| 8 |
-
2015-16,
|
| 9 |
-
2016-17,
|
| 10 |
-
2017-18,
|
| 11 |
-
2018-19,
|
| 12 |
-
2019-20,
|
| 13 |
-
2020-21,
|
| 14 |
-
2021-22,
|
| 15 |
-
2022-23,
|
| 16 |
-
2023-24,
|
| 17 |
-
2024-25,
|
| 18 |
-
2025-26,
|
|
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
+
2009-10,2.914305,644,0.5
|
| 3 |
+
2010-11,1.4526294,134,0.0
|
| 4 |
+
2011-12,5.0212684,42,1.0
|
| 5 |
+
2012-13,4.1067224,34,0.743726909160614
|
| 6 |
+
2013-14,5.695188,112,1.0
|
| 7 |
+
2014-15,5.898049,140,1.0
|
| 8 |
+
2015-16,6.3718114,1524,1.0
|
| 9 |
+
2016-17,1.1765703,548,0.0
|
| 10 |
+
2017-18,4.5212493,1173,0.6437966823577881
|
| 11 |
+
2018-19,2.9000986,2509,0.33175134658813477
|
| 12 |
+
2019-20,3.7166483,2032,0.4889240264892578
|
| 13 |
+
2020-21,4.63557,12,0.6658015847206116
|
| 14 |
+
2021-22,3.4363403,105,0.4349692165851593
|
| 15 |
+
2022-23,2.7198908,2170,0.29706427454948425
|
| 16 |
+
2023-24,2.0480578,6859,0.16774727404117584
|
| 17 |
+
2024-25,2.3900552,6310,0.23357625305652618
|
| 18 |
+
2025-26,4.347359,357,0.6103256344795227
|
results_new/drift_scores_tvae_h1n1_lag2.csv
CHANGED
|
@@ -1,17 +1,17 @@
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
-
2010-11,
|
| 3 |
-
2011-12,
|
| 4 |
-
2012-13,
|
| 5 |
-
2013-14,
|
| 6 |
-
2014-15,
|
| 7 |
-
2015-16,
|
| 8 |
-
2016-17,
|
| 9 |
-
2017-18,
|
| 10 |
-
2018-19,
|
| 11 |
-
2019-20,
|
| 12 |
-
2020-21,
|
| 13 |
-
2021-22,
|
| 14 |
-
2022-23,
|
| 15 |
-
2023-24,
|
| 16 |
-
2024-25,
|
| 17 |
-
2025-26,
|
|
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
+
2010-11,3.7442734,134,0.5
|
| 3 |
+
2011-12,6.351186,42,1.0
|
| 4 |
+
2012-13,3.9396358,34,0.07494012266397476
|
| 5 |
+
2013-14,7.693106,112,1.0
|
| 6 |
+
2014-15,7.2475395,140,0.8871649503707886
|
| 7 |
+
2015-16,5.1903796,1524,0.36621105670928955
|
| 8 |
+
2016-17,5.941939,548,0.5565354824066162
|
| 9 |
+
2017-18,5.0522604,1173,0.33123382925987244
|
| 10 |
+
2018-19,4.7005973,2509,0.24217887222766876
|
| 11 |
+
2019-20,5.4949107,2032,0.443330317735672
|
| 12 |
+
2020-21,5.3348856,12,0.4028056561946869
|
| 13 |
+
2021-22,4.241917,105,0.12602299451828003
|
| 14 |
+
2022-23,4.9349046,2170,0.30151471495628357
|
| 15 |
+
2023-24,4.0518785,6859,0.07789771258831024
|
| 16 |
+
2024-25,3.3403049,6310,0.0
|
| 17 |
+
2025-26,4.938429,357,0.36714839935302734
|
results_new/drift_scores_tvae_h3n2.csv
CHANGED
|
@@ -1,18 +1,18 @@
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
-
2009-10,
|
| 3 |
-
2010-11,
|
| 4 |
-
2011-12,
|
| 5 |
-
2012-13,
|
| 6 |
-
2013-14,
|
| 7 |
-
2014-15,
|
| 8 |
-
2015-16,
|
| 9 |
-
2016-17,
|
| 10 |
-
2017-18,
|
| 11 |
-
2018-19,
|
| 12 |
-
2019-20,
|
| 13 |
-
2020-21,
|
| 14 |
-
2021-22,
|
| 15 |
-
2022-23,
|
| 16 |
-
2023-24,
|
| 17 |
-
2024-25,0.
|
| 18 |
-
2025-26,
|
|
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
+
2009-10,3.6554613,7,0.5
|
| 3 |
+
2010-11,3.4114742,143,0.0
|
| 4 |
+
2011-12,2.7550397,73,0.0
|
| 5 |
+
2012-13,4.1842666,1091,1.0
|
| 6 |
+
2013-14,3.165591,86,0.28725412487983704
|
| 7 |
+
2014-15,2.3814793,1432,0.0
|
| 8 |
+
2015-16,2.969132,1238,0.3259689509868622
|
| 9 |
+
2016-17,2.9479842,2591,0.31423836946487427
|
| 10 |
+
2017-18,3.3224173,2572,0.5219351053237915
|
| 11 |
+
2018-19,3.6366105,3863,0.6962170600891113
|
| 12 |
+
2019-20,4.1226335,929,0.9658123254776001
|
| 13 |
+
2020-21,4.2510667,82,1.0
|
| 14 |
+
2021-22,1.6766677,5132,0.0
|
| 15 |
+
2022-23,2.1843247,3829,0.1971943974494934
|
| 16 |
+
2023-24,3.4487853,5106,0.6883617043495178
|
| 17 |
+
2024-25,0.78527105,7078,0.0
|
| 18 |
+
2025-26,4.0305543,2621,0.9363746643066406
|
results_new/drift_scores_tvae_h3n2_lag2.csv
CHANGED
|
@@ -1,17 +1,17 @@
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
-
2010-11,
|
| 3 |
-
2011-12,
|
| 4 |
-
2012-13,
|
| 5 |
-
2013-14,
|
| 6 |
-
2014-15,
|
| 7 |
-
2015-16,
|
| 8 |
-
2016-17,
|
| 9 |
-
2017-18,
|
| 10 |
-
2018-19,
|
| 11 |
-
2019-20,
|
| 12 |
-
2020-21,
|
| 13 |
-
2021-22,
|
| 14 |
-
2022-23,
|
| 15 |
-
2023-24,
|
| 16 |
-
2024-25,
|
| 17 |
-
2025-26,
|
|
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
+
2010-11,4.5733523,143,0.5
|
| 3 |
+
2011-12,3.7263837,73,0.0
|
| 4 |
+
2012-13,5.1373396,1091,1.0
|
| 5 |
+
2013-14,5.0665174,86,0.949805498123169
|
| 6 |
+
2014-15,4.593628,1432,0.6146501302719116
|
| 7 |
+
2015-16,2.5656319,1238,0.0
|
| 8 |
+
2016-17,3.1040294,2591,0.20935410261154175
|
| 9 |
+
2017-18,3.6634839,2572,0.4268960952758789
|
| 10 |
+
2018-19,3.8683372,3863,0.5065526366233826
|
| 11 |
+
2019-20,4.480504,929,0.7445916533470154
|
| 12 |
+
2020-21,4.4564667,82,0.7352448105812073
|
| 13 |
+
2021-22,4.0914435,5132,0.5933067798614502
|
| 14 |
+
2022-23,2.496411,3829,0.0
|
| 15 |
+
2023-24,3.3203747,5106,0.3119977116584778
|
| 16 |
+
2024-25,3.4930918,7078,0.3773978352546692
|
| 17 |
+
2025-26,4.3804383,2621,0.7133957743644714
|
results_new/drift_scores_vae_h1n1.csv
CHANGED
|
@@ -1,18 +1,18 @@
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm,subtype
|
| 2 |
-
2009-10,1.
|
| 3 |
-
2010-11,
|
| 4 |
-
2011-12,
|
| 5 |
-
2012-13,
|
| 6 |
-
2013-14,
|
| 7 |
-
2014-15,
|
| 8 |
-
2015-16,
|
| 9 |
-
2016-17,
|
| 10 |
-
2017-18,
|
| 11 |
-
2018-19,
|
| 12 |
-
2019-20,1.
|
| 13 |
-
2020-21,
|
| 14 |
-
2021-22,
|
| 15 |
-
2022-23,
|
| 16 |
-
2023-24,
|
| 17 |
-
2024-25,
|
| 18 |
-
2025-26,
|
|
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm,subtype
|
| 2 |
+
2009-10,1.9473892,644,0.5,H1N1
|
| 3 |
+
2010-11,2.1451635,134,1.0,H1N1
|
| 4 |
+
2011-12,3.6496725,42,1.0,H1N1
|
| 5 |
+
2012-13,4.067254,34,1.0,H1N1
|
| 6 |
+
2013-14,3.87928,112,0.9113273024559021,H1N1
|
| 7 |
+
2014-15,5.7052264,140,1.0,H1N1
|
| 8 |
+
2015-16,5.8229895,1524,1.0,H1N1
|
| 9 |
+
2016-17,1.5407356,548,0.0,H1N1
|
| 10 |
+
2017-18,2.7393959,1173,0.27991342544555664,H1N1
|
| 11 |
+
2018-19,1.4092766,2509,0.0,H1N1
|
| 12 |
+
2019-20,1.96578,2032,0.1260850876569748,H1N1
|
| 13 |
+
2020-21,2.792158,12,0.3133147358894348,H1N1
|
| 14 |
+
2021-22,2.9858384,105,0.35719627141952515,H1N1
|
| 15 |
+
2022-23,2.0820074,2170,0.1524183452129364,H1N1
|
| 16 |
+
2023-24,1.1164455,6859,0.0,H1N1
|
| 17 |
+
2024-25,1.8971244,6310,0.16587093472480774,H1N1
|
| 18 |
+
2025-26,2.7379398,357,0.34451910853385925,H1N1
|
results_new/drift_scores_vae_h1n1_lag2.csv
CHANGED
|
@@ -1,17 +1,17 @@
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
-
2010-11,
|
| 3 |
-
2011-12,
|
| 4 |
-
2012-13,
|
| 5 |
-
2013-14,
|
| 6 |
-
2014-15,
|
| 7 |
-
2015-16,
|
| 8 |
-
2016-17,
|
| 9 |
-
2017-18,
|
| 10 |
-
2018-19,
|
| 11 |
-
2019-20,
|
| 12 |
-
2020-21,
|
| 13 |
-
2021-22,
|
| 14 |
-
2022-23,
|
| 15 |
-
2023-24,
|
| 16 |
-
2024-25,
|
| 17 |
-
2025-26,
|
|
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
+
2010-11,3.0683653,134,0.5
|
| 3 |
+
2011-12,4.466566,42,1.0
|
| 4 |
+
2012-13,3.3756998,34,0.21980707347393036
|
| 5 |
+
2013-14,5.265854,112,1.0
|
| 6 |
+
2014-15,6.6002417,140,1.0
|
| 7 |
+
2015-16,3.2982664,1524,0.06509318202733994
|
| 8 |
+
2016-17,5.7733173,548,0.7658682465553284
|
| 9 |
+
2017-18,2.9352663,1173,0.0
|
| 10 |
+
2018-19,2.914298,2509,0.0
|
| 11 |
+
2019-20,2.5310476,2032,0.0
|
| 12 |
+
2020-21,3.5731637,12,0.2560989260673523
|
| 13 |
+
2021-22,2.7042725,105,0.0425698384642601
|
| 14 |
+
2022-23,3.9308312,2170,0.3439953029155731
|
| 15 |
+
2023-24,2.2295303,6859,0.0
|
| 16 |
+
2024-25,2.0052493,6310,0.0
|
| 17 |
+
2025-26,3.342078,357,0.2909316420555115
|
results_new/drift_scores_vae_h3n2.csv
CHANGED
|
@@ -1,18 +1,18 @@
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm,subtype
|
| 2 |
-
2009-10,
|
| 3 |
-
2010-11,
|
| 4 |
-
2011-12,
|
| 5 |
-
2012-13,
|
| 6 |
-
2013-14,
|
| 7 |
-
2014-15,
|
| 8 |
-
2015-16,
|
| 9 |
-
2016-17,
|
| 10 |
-
2017-18,
|
| 11 |
-
2018-19,
|
| 12 |
-
2019-20,
|
| 13 |
-
2020-21,
|
| 14 |
-
2021-22,0.
|
| 15 |
-
2022-23,
|
| 16 |
-
2023-24,
|
| 17 |
-
2024-25,
|
| 18 |
-
2025-26,
|
|
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm,subtype
|
| 2 |
+
2009-10,6.1183867,7,0.5,H3N2
|
| 3 |
+
2010-11,5.7967086,143,0.0,H3N2
|
| 4 |
+
2011-12,2.0311272,73,0.0,H3N2
|
| 5 |
+
2012-13,3.9450805,1091,0.4682730436325073,H3N2
|
| 6 |
+
2013-14,2.0806854,86,0.01212503481656313,H3N2
|
| 7 |
+
2014-15,1.7202483,1432,0.0,H3N2
|
| 8 |
+
2015-16,1.975741,1238,0.058091096580028534,H3N2
|
| 9 |
+
2016-17,2.12881,2591,0.09289420396089554,H3N2
|
| 10 |
+
2017-18,2.3091416,2572,0.13389603793621063,H3N2
|
| 11 |
+
2018-19,3.423726,3863,0.3873178958892822,H3N2
|
| 12 |
+
2019-20,3.6749094,929,0.4444291591644287,H3N2
|
| 13 |
+
2020-21,3.4970655,82,0.40399301052093506,H3N2
|
| 14 |
+
2021-22,0.98050576,5132,0.0,H3N2
|
| 15 |
+
2022-23,2.2399187,3829,0.24512304365634918,H3N2
|
| 16 |
+
2023-24,3.4316835,5106,0.4770795404911041,H3N2
|
| 17 |
+
2024-25,1.3332014,7078,0.0686461329460144,H3N2
|
| 18 |
+
2025-26,3.337307,2621,0.45871075987815857,H3N2
|
results_new/drift_scores_vae_h3n2_lag2.csv
CHANGED
|
@@ -1,17 +1,17 @@
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
-
2010-11,
|
| 3 |
-
2011-12,
|
| 4 |
-
2012-13,
|
| 5 |
-
2013-14,
|
| 6 |
-
2014-15,
|
| 7 |
-
2015-16,
|
| 8 |
-
2016-17,
|
| 9 |
-
2017-18,
|
| 10 |
-
2018-19,
|
| 11 |
-
2019-20,
|
| 12 |
-
2020-21,
|
| 13 |
-
2021-22,
|
| 14 |
-
2022-23,
|
| 15 |
-
2023-24,
|
| 16 |
-
2024-25,
|
| 17 |
-
2025-26,
|
|
|
|
| 1 |
season,drift_raw,n_sequences,drift_norm
|
| 2 |
+
2010-11,3.8453658,143,0.5
|
| 3 |
+
2011-12,5.2308064,73,1.0
|
| 4 |
+
2012-13,4.1863084,1091,0.24608966708183289
|
| 5 |
+
2013-14,4.3651376,86,0.3751671612262726
|
| 6 |
+
2014-15,3.1048477,1432,0.0
|
| 7 |
+
2015-16,2.1606388,1238,0.0
|
| 8 |
+
2016-17,2.3748763,2591,0.0697803795337677
|
| 9 |
+
2017-18,2.9142287,2572,0.24545562267303467
|
| 10 |
+
2018-19,3.235539,3863,0.3501112461090088
|
| 11 |
+
2019-20,3.703335,929,0.5024794936180115
|
| 12 |
+
2020-21,4.142055,82,0.6453772187232971
|
| 13 |
+
2021-22,3.7562048,5132,0.5196999907493591
|
| 14 |
+
2022-23,2.3349288,3829,0.05676886811852455
|
| 15 |
+
2023-24,3.29202,5106,0.368507981300354
|
| 16 |
+
2024-25,3.4486716,7078,0.41953176259994507
|
| 17 |
+
2025-26,3.3143742,2621,0.375789076089859
|
results_new/hamming_baseline_h3n2.csv
CHANGED
|
@@ -1,18 +1,18 @@
|
|
| 1 |
season,hamming_raw,hamming_norm
|
| 2 |
-
2009-10,0.
|
| 3 |
-
2010-11,0.
|
| 4 |
-
2011-12,0.
|
| 5 |
-
2012-13,0.
|
| 6 |
-
2013-14,0.
|
| 7 |
-
2014-15,0.
|
| 8 |
-
2015-16,0.
|
| 9 |
-
2016-17,0.
|
| 10 |
-
2017-18,0.
|
| 11 |
-
2018-19,0.
|
| 12 |
-
2019-20,0.
|
| 13 |
-
2020-21,0.
|
| 14 |
2021-22,0.0,0.0
|
| 15 |
-
2022-23,0.
|
| 16 |
-
2023-24,0.
|
| 17 |
-
2024-25,0.
|
| 18 |
-
2025-26,0.
|
|
|
|
| 1 |
season,hamming_raw,hamming_norm
|
| 2 |
+
2009-10,0.005393743257820928,0.5
|
| 3 |
+
2010-11,0.006472491909385114,1.0
|
| 4 |
+
2011-12,0.007011866235167206,1.0
|
| 5 |
+
2012-13,0.008629989212513484,1.0
|
| 6 |
+
2013-14,0.005933117583603021,0.1666666666666667
|
| 7 |
+
2014-15,0.002157497303128371,0.0
|
| 8 |
+
2015-16,0.0005393743257820927,0.0
|
| 9 |
+
2016-17,0.005933117583603021,0.6666666666666667
|
| 10 |
+
2017-18,0.010787486515641856,1.0
|
| 11 |
+
2018-19,0.02912621359223301,1.0
|
| 12 |
+
2019-20,0.030744336569579287,1.0
|
| 13 |
+
2020-21,0.01779935275080906,0.5714285714285714
|
| 14 |
2021-22,0.0,0.0
|
| 15 |
+
2022-23,0.012405609492988134,0.4035087719298246
|
| 16 |
+
2023-24,0.016181229773462782,0.5263157894736842
|
| 17 |
+
2024-25,0.0005393743257820927,0.017543859649122806
|
| 18 |
+
2025-26,0.010248112189859764,0.33333333333333337
|
results_new/hamming_baseline_h3n2_lag2.csv
CHANGED
|
@@ -1,17 +1,17 @@
|
|
| 1 |
season,hamming_raw,hamming_norm
|
| 2 |
-
2010-11,0.
|
| 3 |
-
2011-12,0.
|
| 4 |
-
2012-13,0.
|
| 5 |
-
2013-14,0.
|
| 6 |
-
2014-15,0.
|
| 7 |
-
2015-16,0.
|
| 8 |
-
2016-17,0.
|
| 9 |
-
2017-18,0.
|
| 10 |
-
2018-19,0.
|
| 11 |
-
2019-20,0.
|
| 12 |
-
2020-21,0.
|
| 13 |
-
2021-22,0.
|
| 14 |
-
2022-23,0.
|
| 15 |
-
2023-24,0.
|
| 16 |
-
2024-25,0.
|
| 17 |
-
2025-26,0.
|
|
|
|
| 1 |
season,hamming_raw,hamming_norm
|
| 2 |
+
2010-11,0.011866235167206042,0.5
|
| 3 |
+
2011-12,0.0005393743257820927,0.0
|
| 4 |
+
2012-13,0.01564185544768069,1.0
|
| 5 |
+
2013-14,0.01348435814455232,0.8571428571428572
|
| 6 |
+
2014-15,0.008090614886731391,0.49999999999999994
|
| 7 |
+
2015-16,0.0016181229773462784,0.07142857142857144
|
| 8 |
+
2016-17,0.006472491909385114,0.39285714285714285
|
| 9 |
+
2017-18,0.008090614886731391,0.49999999999999994
|
| 10 |
+
2018-19,0.02750809061488673,1.0
|
| 11 |
+
2019-20,0.014023732470334413,0.5
|
| 12 |
+
2020-21,0.04692556634304207,1.0
|
| 13 |
+
2021-22,0.01779935275080906,0.37209302325581395
|
| 14 |
+
2022-23,0.012405609492988134,0.2558139534883721
|
| 15 |
+
2023-24,0.01564185544768069,0.32558139534883723
|
| 16 |
+
2024-25,0.016720604099244876,0.34883720930232565
|
| 17 |
+
2025-26,0.009708737864077669,0.19767441860465115
|
results_new/latent_diversity_tvae_h3n2.csv
CHANGED
|
@@ -1,19 +1,19 @@
|
|
| 1 |
season,latent_spread,latent_spread_std,latent_var_trace,n_sequences
|
| 2 |
-
2008-09,
|
| 3 |
-
2009-10,
|
| 4 |
-
2010-11,
|
| 5 |
-
2011-12,
|
| 6 |
-
2012-13,
|
| 7 |
-
2013-14,
|
| 8 |
-
2014-15,
|
| 9 |
-
2015-16,
|
| 10 |
-
2016-17,
|
| 11 |
-
2017-18,
|
| 12 |
-
2018-19,
|
| 13 |
-
2019-20,
|
| 14 |
-
2020-21,
|
| 15 |
-
2021-22,
|
| 16 |
-
2022-23,
|
| 17 |
-
2023-24,0.
|
| 18 |
-
2024-25,
|
| 19 |
-
2025-26,
|
|
|
|
| 1 |
season,latent_spread,latent_spread_std,latent_var_trace,n_sequences
|
| 2 |
+
2008-09,0.3514549,0.921172,0.976214968289716,236
|
| 3 |
+
2009-10,5.0459914,1.2687854,31.58382431818852,7
|
| 4 |
+
2010-11,3.7588248,1.789277,17.452317107739233,143
|
| 5 |
+
2011-12,5.1395073,1.2054205,28.25461974743554,73
|
| 6 |
+
2012-13,2.8362477,2.3693771,13.670779555635587,1091
|
| 7 |
+
2013-14,3.9855099,1.1299956,17.363077394110583,86
|
| 8 |
+
2014-15,4.058851,1.2284625,17.995957793368675,1432
|
| 9 |
+
2015-16,4.89944,1.1941148,25.450975881863467,1238
|
| 10 |
+
2016-17,4.604378,0.93995893,22.092346755584522,2591
|
| 11 |
+
2017-18,2.4751942,2.1737309,10.855912700633152,2572
|
| 12 |
+
2018-19,3.4912825,1.7975943,15.424391669523843,3863
|
| 13 |
+
2019-20,4.975693,1.2111263,26.25261122455143,929
|
| 14 |
+
2020-21,3.4024997,2.018207,15.843378189365517,82
|
| 15 |
+
2021-22,2.335761,1.903944,9.082552376398837,5132
|
| 16 |
+
2022-23,2.5314767,2.0475838,10.60374443876163,3829
|
| 17 |
+
2023-24,0.9588288,1.8945732,4.5096438741425455,5106
|
| 18 |
+
2024-25,2.4548104,2.8311925,14.043728122793624,7078
|
| 19 |
+
2025-26,1.0069419,1.8738798,4.527084137220221,2621
|
results_new/latent_diversity_vae_h3n2.csv
CHANGED
|
@@ -1,19 +1,19 @@
|
|
| 1 |
season,latent_spread,latent_spread_std,latent_var_trace,n_sequences
|
| 2 |
-
2008-09,
|
| 3 |
-
2009-10,
|
| 4 |
-
2010-11,
|
| 5 |
-
2011-12,
|
| 6 |
-
2012-13,
|
| 7 |
-
2013-14,
|
| 8 |
-
2014-15,
|
| 9 |
-
2015-16,
|
| 10 |
-
2016-17,
|
| 11 |
-
2017-18,
|
| 12 |
-
2018-19,
|
| 13 |
-
2019-20,
|
| 14 |
-
2020-21,
|
| 15 |
-
2021-22,
|
| 16 |
-
2022-23,
|
| 17 |
-
2023-24,
|
| 18 |
-
2024-25,
|
| 19 |
-
2025-26,
|
|
|
|
| 1 |
season,latent_spread,latent_spread_std,latent_var_trace,n_sequences
|
| 2 |
+
2008-09,3.313669,1.6013731,13.602436546379343,236
|
| 3 |
+
2009-10,9.784639,4.9600573,140.39821454604873,7
|
| 4 |
+
2010-11,4.327881,3.2802498,29.69827083144147,143
|
| 5 |
+
2011-12,5.98618,4.6923175,58.65569272259287,73
|
| 6 |
+
2012-13,3.8559673,1.3916547,16.820607908633896,1091
|
| 7 |
+
2013-14,3.8778977,1.1995859,16.670944256951593,86
|
| 8 |
+
2014-15,3.5541167,1.2522563,14.209813070619267,1432
|
| 9 |
+
2015-16,4.352375,0.8372987,19.660118630489066,1238
|
| 10 |
+
2016-17,4.1109977,1.09019,18.095800364470374,2591
|
| 11 |
+
2017-18,3.3771176,1.5626003,13.852027837700037,2572
|
| 12 |
+
2018-19,3.669112,1.2746193,15.09094246461552,3863
|
| 13 |
+
2019-20,4.588271,0.9704961,22.017796871390356,929
|
| 14 |
+
2020-21,2.9426322,1.6353238,11.473287626384167,82
|
| 15 |
+
2021-22,2.8177254,1.3714436,9.822348257539309,5132
|
| 16 |
+
2022-23,3.4422715,1.1090723,13.082690409720755,3829
|
| 17 |
+
2023-24,3.2002034,1.1856002,11.649229902045345,5106
|
| 18 |
+
2024-25,3.5912745,1.1871618,14.308626674583314,7078
|
| 19 |
+
2025-26,2.6462448,1.0272139,8.060856173055233,2621
|
results_new/loo_cv_vae.csv
CHANGED
|
@@ -1,16 +1,16 @@
|
|
| 1 |
season,hosp_obs,hosp_pred,abs_err,rel_err
|
| 2 |
-
2010-11,21.5,
|
| 3 |
-
2011-12,8.699999809265137,0.
|
| 4 |
-
2012-13,44.0,
|
| 5 |
-
2013-14,35.099998474121094,
|
| 6 |
-
2014-15,64.0999984741211,0.
|
| 7 |
-
2015-16,31.399999618530273,
|
| 8 |
-
2016-17,62.0,
|
| 9 |
-
2017-18,102.9000015258789,
|
| 10 |
-
2018-19,63.599998474121094,
|
| 11 |
-
2019-20,66.0,
|
| 12 |
-
2021-22,17.5,0.
|
| 13 |
-
2022-23,62.400001525878906,
|
| 14 |
-
2023-24,83.5,
|
| 15 |
-
2024-25,126.19999694824219,0.
|
| 16 |
-
2025-26,78.19999694824219,
|
|
|
|
| 1 |
season,hosp_obs,hosp_pred,abs_err,rel_err
|
| 2 |
+
2010-11,21.5,81.29727172851562,59.797271728515625,2.781268452489099
|
| 3 |
+
2011-12,8.699999809265137,0.9273473620414734,7.772652447223663,0.893408346853768
|
| 4 |
+
2012-13,44.0,297.05535888671875,253.05535888671875,5.751258156516335
|
| 5 |
+
2013-14,35.099998474121094,682.6973266601562,647.5973281860352,18.450067132153944
|
| 6 |
+
2014-15,64.0999984741211,0.49730488657951355,63.60269358754158,0.9922417332540142
|
| 7 |
+
2015-16,31.399999618530273,480.73614501953125,449.336145401001,14.310068498721622
|
| 8 |
+
2016-17,62.0,0.3115348815917969,61.6884651184082,0.9949752438452936
|
| 9 |
+
2017-18,102.9000015258789,0.8319525718688965,102.06804895401001,0.9919149411124191
|
| 10 |
+
2018-19,63.599998474121094,0.7699694633483887,62.830029010772705,0.9878935616065826
|
| 11 |
+
2019-20,66.0,1.6041995286941528,64.39580047130585,0.9756939465349371
|
| 12 |
+
2021-22,17.5,0.09660889208316803,17.403391107916832,0.9944794918809619
|
| 13 |
+
2022-23,62.400001525878906,12.619903564453125,49.78009796142578,0.7977579606433292
|
| 14 |
+
2023-24,83.5,0.24529504776000977,83.25470495223999,0.9970623347573652
|
| 15 |
+
2024-25,126.19999694824219,0.42304933071136475,125.77694761753082,0.9966477865218581
|
| 16 |
+
2025-26,78.19999694824219,56.30651092529297,21.89348602294922,0.2799678628816283
|
results_new/sirc_params_tvae.csv
CHANGED
|
@@ -1,10 +1,10 @@
|
|
| 1 |
,0
|
| 2 |
-
delta_min,0.
|
| 3 |
-
delta_max,0.
|
| 4 |
-
S0_base,0.
|
| 5 |
-
ihr,0.
|
| 6 |
beta,0.3
|
| 7 |
gamma,0.2
|
| 8 |
sigma,0.008333333333333333
|
| 9 |
mu,3.6529680365296805e-05
|
| 10 |
-
calib_rrmse,
|
|
|
|
| 1 |
,0
|
| 2 |
+
delta_min,0.0031697736121714115
|
| 3 |
+
delta_max,0.04337846487760544
|
| 4 |
+
S0_base,0.3173694610595703
|
| 5 |
+
ihr,0.008885985240340233
|
| 6 |
beta,0.3
|
| 7 |
gamma,0.2
|
| 8 |
sigma,0.008333333333333333
|
| 9 |
mu,3.6529680365296805e-05
|
| 10 |
+
calib_rrmse,8.669933319091797
|
results_new/sirc_params_vae.csv
CHANGED
|
@@ -1,10 +1,10 @@
|
|
| 1 |
,0
|
| 2 |
-
delta_min,0.
|
| 3 |
-
delta_max,0.
|
| 4 |
-
S0_base,0.
|
| 5 |
-
ihr,0.
|
| 6 |
beta,0.3
|
| 7 |
gamma,0.2
|
| 8 |
sigma,0.008333333333333333
|
| 9 |
mu,3.6529680365296805e-05
|
| 10 |
-
calib_rrmse,
|
|
|
|
| 1 |
,0
|
| 2 |
+
delta_min,0.004339590668678284
|
| 3 |
+
delta_max,0.02310071513056755
|
| 4 |
+
S0_base,0.39473336935043335
|
| 5 |
+
ihr,0.011631572619080544
|
| 6 |
beta,0.3
|
| 7 |
gamma,0.2
|
| 8 |
sigma,0.008333333333333333
|
| 9 |
mu,3.6529680365296805e-05
|
| 10 |
+
calib_rrmse,6.689363479614258
|
results_new/sirc_params_vae_lag2.csv
CHANGED
|
@@ -1,10 +1,10 @@
|
|
| 1 |
,0
|
| 2 |
-
delta_min,0.
|
| 3 |
-
delta_max,0.
|
| 4 |
-
S0_base,0.
|
| 5 |
-
ihr,0.
|
| 6 |
beta,0.3
|
| 7 |
gamma,0.2
|
| 8 |
sigma,0.008333333333333333
|
| 9 |
mu,3.6529680365296805e-05
|
| 10 |
-
calib_rrmse,
|
|
|
|
| 1 |
,0
|
| 2 |
+
delta_min,0.004489263519644737
|
| 3 |
+
delta_max,0.021894609555602074
|
| 4 |
+
S0_base,0.3526150584220886
|
| 5 |
+
ihr,0.010617885738611221
|
| 6 |
beta,0.3
|
| 7 |
gamma,0.2
|
| 8 |
sigma,0.008333333333333333
|
| 9 |
mu,3.6529680365296805e-05
|
| 10 |
+
calib_rrmse,19.4957275390625
|
results_new/sirc_simulation_tvae.csv
CHANGED
|
@@ -1,14 +1,22 @@
|
|
| 1 |
season,drift_blended,hosp_obs,hosp_sim
|
| 2 |
-
2010-11,0.0,21.5,
|
| 3 |
-
|
| 4 |
-
|
| 5 |
-
|
| 6 |
-
|
| 7 |
-
|
| 8 |
-
|
| 9 |
-
|
| 10 |
-
|
| 11 |
-
|
| 12 |
-
|
| 13 |
-
|
| 14 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
season,drift_blended,hosp_obs,hosp_sim
|
| 2 |
+
2010-11,0.0,21.5,0.092914656
|
| 3 |
+
2010-11,0.0,21.5,0.092914656
|
| 4 |
+
2011-12,0.25877763328998704,8.7,20.738436
|
| 5 |
+
2011-12,0.25877763328998704,8.7,20.738436
|
| 6 |
+
2012-13,0.9852958062633138,44.0,543.9174
|
| 7 |
+
2012-13,0.9852958062633138,44.0,543.9174
|
| 8 |
+
2013-14,0.9068774233511345,35.1,536.99756
|
| 9 |
+
2013-14,0.9068774233511345,35.1,536.99756
|
| 10 |
+
2014-15,0.005617977528089888,64.1,0.09402504
|
| 11 |
+
2014-15,0.005617977528089888,64.1,0.09402504
|
| 12 |
+
2015-16,0.8515010278282928,31.4,530.9944
|
| 13 |
+
2015-16,0.8515010278282928,31.4,530.9944
|
| 14 |
+
2016-17,0.30441842041909695,62.0,64.08266
|
| 15 |
+
2016-17,0.30441842041909695,62.0,64.08266
|
| 16 |
+
2017-18,0.540895180958501,102.9,440.0395
|
| 17 |
+
2017-18,0.540895180958501,102.9,440.0395
|
| 18 |
+
2018-19,0.4945977292162307,63.6,399.92328
|
| 19 |
+
2019-20,0.5231065793887718,66.0,426.466
|
| 20 |
+
2021-22,0.0021945974600663942,17.5,0.09334195
|
| 21 |
+
2022-23,0.2278013905374015,62.4,8.209013
|
| 22 |
+
2023-24,0.35541869751681315,83.5,156.1173
|
results_new/sirc_simulation_vae.csv
CHANGED
|
@@ -1,14 +1,22 @@
|
|
| 1 |
season,drift_blended,hosp_obs,hosp_sim,delta_used,S0_used,ihr_used
|
| 2 |
-
2010-11,0.
|
| 3 |
-
|
| 4 |
-
|
| 5 |
-
|
| 6 |
-
|
| 7 |
-
|
| 8 |
-
|
| 9 |
-
|
| 10 |
-
|
| 11 |
-
|
| 12 |
-
|
| 13 |
-
|
| 14 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
season,drift_blended,hosp_obs,hosp_sim,delta_used,S0_used,ihr_used
|
| 2 |
+
2010-11,0.3811659192825112,21.5,27.76354,0.011490691920967914,0.39473336935043335,0.011631572619080544
|
| 3 |
+
2010-11,0.3811659192825112,21.5,27.76354,0.011490691920967914,0.39473336935043335,0.011631572619080544
|
| 4 |
+
2011-12,0.25877763328998704,8.7,4.210244,0.00919455005478487,0.39473336935043335,0.011631572619080544
|
| 5 |
+
2011-12,0.25877763328998704,8.7,4.210244,0.00919455005478487,0.39473336935043335,0.011631572619080544
|
| 6 |
+
2012-13,0.498781967358511,44.0,110.44246,0.013697301237637299,0.39473336935043335,0.011631572619080544
|
| 7 |
+
2012-13,0.498781967358511,44.0,110.44246,0.013697301237637299,0.39473336935043335,0.011631572619080544
|
| 8 |
+
2013-14,0.7938435890959884,35.1,473.00378,0.019232989046981,0.39473336935043335,0.011631572619080544
|
| 9 |
+
2013-14,0.7938435890959884,35.1,473.00378,0.019232989046981,0.39473336935043335,0.011631572619080544
|
| 10 |
+
2014-15,0.005617977528089888,64.1,0.23543864,0.004444990244306875,0.39473336935043335,0.011631572619080544
|
| 11 |
+
2014-15,0.005617977528089888,64.1,0.23543864,0.004444990244306875,0.39473336935043335,0.011631572619080544
|
| 12 |
+
2015-16,0.7924835892322237,31.4,471.8219,0.01920747392026876,0.39473336935043335,0.011631572619080544
|
| 13 |
+
2015-16,0.7924835892322237,31.4,471.8219,0.01920747392026876,0.39473336935043335,0.011631572619080544
|
| 14 |
+
2016-17,0.08999126008711755,62.0,0.37144732,0.006027927899654944,0.39473336935043335,0.011631572619080544
|
| 15 |
+
2016-17,0.08999126008711755,62.0,0.37144732,0.006027927899654944,0.39473336935043335,0.011631572619080544
|
| 16 |
+
2017-18,0.15661444334784863,102.9,0.8081216,0.007277853732856778,0.39473336935043335,0.011631572619080544
|
| 17 |
+
2017-18,0.15661444334784863,102.9,0.8081216,0.007277853732856778,0.39473336935043335,0.011631572619080544
|
| 18 |
+
2018-19,0.17305693220584953,63.6,1.0319885,0.00758633331278496,0.39473336935043335,0.011631572619080544
|
| 19 |
+
2019-20,0.1489034564188727,66.0,0.72476953,0.007133186947358259,0.39473336935043335,0.011631572619080544
|
| 20 |
+
2021-22,0.0018022011676060805,17.5,0.23280214,0.004373401989089104,0.39473336935043335,0.011631572619080544
|
| 21 |
+
2022-23,0.21671195367740292,62.4,2.0849361,0.008405350603999221,0.39473336935043335,0.011631572619080544
|
| 22 |
+
2023-24,0.17197793849479057,83.5,1.0151024,0.007566090177478187,0.39473336935043335,0.011631572619080544
|
results_new/sirc_simulation_vae_lag2.csv
CHANGED
|
@@ -1,14 +1,22 @@
|
|
| 1 |
season,drift_blended,hosp_obs,hosp_sim
|
| 2 |
-
2010-11,0.49999999999999994,21.5,
|
| 3 |
-
|
| 4 |
-
|
| 5 |
-
|
| 6 |
-
|
| 7 |
-
|
| 8 |
-
|
| 9 |
-
|
| 10 |
-
|
| 11 |
-
|
| 12 |
-
|
| 13 |
-
|
| 14 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
season,drift_blended,hosp_obs,hosp_sim
|
| 2 |
+
2010-11,0.49999999999999994,21.5,36.63107
|
| 3 |
+
2010-11,0.49999999999999994,21.5,36.63107
|
| 4 |
+
2011-12,1.0,8.7,478.131
|
| 5 |
+
2011-12,1.0,8.7,478.131
|
| 6 |
+
2012-13,0.24458164941580568,44.0,0.9771865
|
| 7 |
+
2012-13,0.24458164941580568,44.0,0.9771865
|
| 8 |
+
2013-14,0.91836354870293,35.1,425.64105
|
| 9 |
+
2013-14,0.91836354870293,35.1,425.64105
|
| 10 |
+
2014-15,0.005617977528089888,64.1,0.15526259
|
| 11 |
+
2014-15,0.005617977528089888,64.1,0.15526259
|
| 12 |
+
2015-16,0.050752194856795795,31.4,0.17211087
|
| 13 |
+
2015-16,0.050752194856795795,31.4,0.17211087
|
| 14 |
+
2016-17,0.09153312537819147,62.0,0.20082441
|
| 15 |
+
2016-17,0.09153312537819147,62.0,0.20082441
|
| 16 |
+
2017-18,0.2072659218328171,102.9,0.57571805
|
| 17 |
+
2017-18,0.2072659218328171,102.9,0.57571805
|
| 18 |
+
2018-19,0.1564326844316848,63.6,0.31896898
|
| 19 |
+
2019-20,0.036016886780312014,66.0,0.16546425
|
| 20 |
+
2021-22,0.5172926741384354,17.5,44.542946
|
| 21 |
+
2022-23,0.14479478503935916,62.4,0.28654456
|
| 22 |
+
2023-24,0.13283999325913964,83.5,0.25965032
|