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from __future__ import annotations |
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import os |
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import pickle |
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from typing import Literal, Optional, Dict |
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from huggingface_hub import hf_hub_download |
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try: |
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from subiso_dataset import SubgraphIsomorphismDataset, TRAIN_MODE, VAL_MODE, TEST_MODE, BROAD_TEST_MODE, GMN_DATA_TYPE, PYG_DATA_TYPE |
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except Exception as e: |
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raise ImportError( |
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"Make sure `subiso_dataset.py` (with SubgraphIsomorphismDataset) is in the same repo.\n" |
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f"Import error: {e}" |
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) |
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Mode = Literal["train", "val", "test", "Extra_test_300"] |
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Size = Literal["small", "large"] |
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Name = Literal["aids240k", "mutag240k", "ptc_fm240k", "ptc_fr240k", "ptc_mm240k", "ptc_mr240k"] |
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def _mode_prefix(mode: str) -> str: |
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return "test" if "test" in mode.lower() else mode |
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def _pair_count(dataset_size: Size) -> str: |
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return "80k" if dataset_size == "small" else "240k" |
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def _ensure_paths( |
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repo_id: str, |
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mode: Mode, |
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dataset_name: Name, |
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dataset_size: Size, |
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local_root: Optional[str] = None, |
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) -> Dict[str, str]: |
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""" |
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Download the three files needed for a given split into local cache (or local_root if set): |
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- <mode>_<name><pairs>_query_subgraphs.pkl |
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- <mode>_<name><pairs>_rel_nx_is_subgraph_iso.pkl |
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- <name><pairs>_corpus_subgraphs.pkl (lives next to splits in our layout under `corpus/`) |
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Returns local file paths. |
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""" |
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prefix = _mode_prefix(mode) |
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pairs = _pair_count(dataset_size) |
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query_fname = f"{prefix}_{dataset_name}_{'query_subgraphs' if '_' in dataset_name else 'query_subgraphs'}.pkl" |
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rel_fname = f"{prefix}_{dataset_name}_{'rel_nx_is_subgraph_iso' if '_' in dataset_name else 'rel_nx_is_subgraph_iso'}.pkl" |
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pairs = "80k" if dataset_size == "small" else "240k" |
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query_fname = f"{size_folder}/{prefix}_{dataset_name}{pairs}_query_subgraphs.pkl" |
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rel_fname = f"{size_folder}/{prefix}_{dataset_name}{pairs}_rel_nx_is_subgraph_iso.pkl" |
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corpus_fname = f"{size_folder}/{dataset_name}{pairs}_corpus_subgraphs.pkl" |
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repo_query_path = f"splits/{mode}/{query_fname}" |
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repo_rel_path = f"splits/{mode}/{rel_fname}" |
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repo_corpus_path = f"corpus/{corpus_fname}" |
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kwargs = dict(repo_id=repo_id, repo_type="dataset") |
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query_path = hf_hub_download(filename=repo_query_path, **kwargs, local_dir=local_root, local_dir_use_symlinks=False) |
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rel_path = hf_hub_download(filename=repo_rel_path, **kwargs, local_dir=local_root, local_dir_use_symlinks=False) |
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corpus_path= hf_hub_download(filename=repo_corpus_path,**kwargs, local_dir=local_root, local_dir_use_symlinks=False) |
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return {"query": query_path, "rel": rel_path, "corpus": corpus_path} |
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def load_isonetpp_benchmark( |
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repo_id: str = "structlearning/isonetpp-benchmark", |
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mode: Mode = "train", |
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dataset_name: Name = "aids240k", |
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dataset_size: Size = "large", |
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batch_size: int = 128, |
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data_type: str = "pyg", |
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device: Optional[str] = None, |
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download_root: Optional[str] = None, |
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): |
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""" |
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Returns: an initialized SubgraphIsomorphismDataset with files downloaded from the HF Hub. |
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""" |
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mode_map = { |
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"train": TRAIN_MODE, "val": VAL_MODE, "test": TEST_MODE, "extra_test_300": BROAD_TEST_MODE, "Extra_test_300": BROAD_TEST_MODE |
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} |
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mode_norm = mode_map.get(mode, mode) |
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paths = _ensure_paths( |
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repo_id=repo_id, |
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mode=mode_norm, |
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dataset_name=dataset_name, |
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dataset_size=dataset_size, |
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local_root=download_root, |
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) |
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base_path = os.path.dirname(os.path.dirname(paths["query"])) |
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dataset_base_path = os.path.dirname(base_path) |
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dataset_config = dict( |
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mode=mode_norm, |
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dataset_name=dataset_name, |
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dataset_size=dataset_size, |
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batch_size=batch_size, |
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data_type=data_type, |
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dataset_base_path=dataset_base_path, |
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experiment=None, |
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dataset_path_override=None, |
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device=device, |
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) |
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ds = SubgraphIsomorphismDataset(**dataset_config) |
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return ds |
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