| |
| from __future__ import annotations |
| import os |
| import pickle |
| from typing import Literal, Optional, Dict |
| from huggingface_hub import hf_hub_download |
|
|
| try: |
| from subiso_dataset import SubgraphIsomorphismDataset, TRAIN_MODE, VAL_MODE, TEST_MODE, BROAD_TEST_MODE, GMN_DATA_TYPE, PYG_DATA_TYPE |
| except Exception as e: |
| raise ImportError( |
| "Make sure `subiso_dataset.py` (with SubgraphIsomorphismDataset) is in the same repo.\n" |
| f"Import error: {e}" |
| ) |
|
|
| Mode = Literal["train", "val", "test", "Extra_test_300"] |
| Size = Literal["small", "large"] |
| Name = Literal["aids240k", "mutag240k", "ptc_fm240k", "ptc_fr240k", "ptc_mm240k", "ptc_mr240k"] |
|
|
| def _mode_prefix(mode: str) -> str: |
| |
| return "test" if "test" in mode.lower() else mode |
|
|
| def _pair_count(dataset_size: Size) -> str: |
| return "80k" if dataset_size == "small" else "240k" |
|
|
| def _ensure_paths( |
| repo_id: str, |
| mode: Mode, |
| dataset_name: Name, |
| dataset_size: Size, |
| local_root: Optional[str] = None, |
| ) -> Dict[str, str]: |
| """ |
| Download the three files needed for a given split into local cache (or local_root if set): |
| - <mode>_<name><pairs>_query_subgraphs.pkl |
| - <mode>_<name><pairs>_rel_nx_is_subgraph_iso.pkl |
| - <name><pairs>_corpus_subgraphs.pkl (lives next to splits in our layout under `corpus/`) |
| Returns local file paths. |
| """ |
| prefix = _mode_prefix(mode) |
| pairs = _pair_count(dataset_size) |
|
|
| |
| |
| |
| |
| query_fname = f"{prefix}_{dataset_name}_{'query_subgraphs' if '_' in dataset_name else 'query_subgraphs'}.pkl" |
| rel_fname = f"{prefix}_{dataset_name}_{'rel_nx_is_subgraph_iso' if '_' in dataset_name else 'rel_nx_is_subgraph_iso'}.pkl" |
| pairs = "80k" if dataset_size == "small" else "240k" |
| size_folder = "small_dataset" if dataset_size == "small" else "large_dataset" |
|
|
| |
| |
| query_fname = f"{prefix}_{dataset_name}{pairs}_query_subgraphs.pkl" |
| rel_fname = f"{prefix}_{dataset_name}{pairs}_rel_nx_is_subgraph_iso.pkl" |
| corpus_fname = f"{dataset_name}{pairs}_corpus_subgraphs.pkl" |
|
|
|
|
|
|
| |
| repo_query_path = f"{size_folder}/splits/{mode}/{query_fname}" |
| repo_rel_path = f"{size_folder}/splits/{mode}/{rel_fname}" |
| repo_corpus_path = f"{size_folder}/corpus/{corpus_fname}" |
|
|
| |
| kwargs = dict(repo_id=repo_id, repo_type="dataset") |
| query_path = hf_hub_download(filename=repo_query_path, **kwargs, local_dir=local_root, local_dir_use_symlinks=False) |
| rel_path = hf_hub_download(filename=repo_rel_path, **kwargs, local_dir=local_root, local_dir_use_symlinks=False) |
| corpus_path= hf_hub_download(filename=repo_corpus_path,**kwargs, local_dir=local_root, local_dir_use_symlinks=False) |
|
|
| return {"query": query_path, "rel": rel_path, "corpus": corpus_path} |
|
|
| def load_isonetpp_benchmark( |
| repo_id: str = "structlearning/isonetpp-benchmark", |
| mode: Mode = "train", |
| dataset_name: Name = "aids240k", |
| dataset_size: Size = "large", |
| batch_size: int = 128, |
| data_type: str = "pyg", |
| device: Optional[str] = None, |
| download_root: Optional[str] = None, |
| ): |
| """ |
| Returns: an initialized SubgraphIsomorphismDataset with files downloaded from the HF Hub. |
| """ |
| |
| mode_map = { |
| "train": TRAIN_MODE, "val": VAL_MODE, "test": TEST_MODE, "extra_test_300": BROAD_TEST_MODE, "Extra_test_300": BROAD_TEST_MODE |
| } |
| mode_norm = mode_map.get(mode, mode) |
|
|
| paths = _ensure_paths( |
| repo_id=repo_id, |
| mode=mode_norm, |
| dataset_name=dataset_name, |
| dataset_size=dataset_size, |
| local_root=download_root, |
| ) |
|
|
| |
| |
| base_path = os.path.dirname(os.path.dirname(paths["query"])) |
| dataset_base_path = os.path.dirname(base_path) |
|
|
| dataset_config = dict( |
| mode=mode_norm, |
| dataset_name=dataset_name, |
| dataset_size=dataset_size, |
| batch_size=batch_size, |
| data_type=data_type, |
| dataset_base_path=dataset_base_path, |
| experiment=None, |
| dataset_path_override=None, |
| device=device, |
| ) |
|
|
| ds = SubgraphIsomorphismDataset(**dataset_config) |
| return ds |
|
|