"""Decontamination matching: automatic rejection and a clean allowlist. ``docs/02_DATA_PIPELINE.md`` §5.2/§5.3 define two outcomes for every train candidate, measured against the frozen evaluation index: - ``REJECT_CONTAMINATION`` — an automatic, non-reviewable exclusion. - near-duplicate — automatically excluded and written to an immutable rejection report. There is no human override or re-admission path. The final allowlist is the train base_ids that are neither exact contamination nor near-duplicates. This fail-closed rule preserves the zero-per-example-human contract and cannot be relaxed to meet a quota. Thresholds are frozen here, not tuned to results (``docs/02`` §5.3). """ from __future__ import annotations from collections.abc import Mapping, Sequence from dataclasses import dataclass, field from typing import Any from ..atomic_io import atomic_write_jsonl from .fingerprints import estimated_jaccard, phash_hamming from .index import LoadedFingerprints, load_all # Frozen thresholds (docs/02 §5.3). PHASH_HAMMING_MAX = 4 OCR_JACCARD_MIN = 0.85 QUESTION_JACCARD_MIN = 0.90 REJECT = "REJECT_CONTAMINATION" NEAR_DUP = "NEAR_DUPLICATE" CLEAN = "CLEAN" @dataclass(frozen=True) class Match: """One near-duplicate match between a train item and an eval item.""" eval_base_id: str reason: str evidence: dict[str, Any] = field(default_factory=dict) @dataclass class ItemDecision: """The decontamination verdict for one train base_id.""" base_id: str source: str outcome: str # REJECT | NEAR_DUPLICATE | CLEAN reject_reason: str | None = None matches: list[Match] = field(default_factory=list) @dataclass class DecontaminationResult: rejected: list[ItemDecision] near_duplicates: list[ItemDecision] clean: list[ItemDecision] @property def allowlist_base_ids(self) -> list[str]: return sorted(d.base_id for d in self.clean) def _classify( train: LoadedFingerprints, eval_fps: Sequence[LoadedFingerprints], *, eval_image_shas: set[str], source_native_to_base: dict[str, str], eval_by_base: dict[str, LoadedFingerprints], canonical_q_to_bases: Mapping[str, Sequence[str]], ) -> ItemDecision: # --- auto-reject (docs/02 §5.2) --- shared_images = [sha for sha in train.image_sha256 if sha in eval_image_shas] if shared_images: return ItemDecision( base_id=train.base_id, source=train.source, outcome=REJECT, reject_reason="train image SHA-256 matches an eval image", ) # canonical question SHA-256 AND >=1 image SHA-256 both match the SAME eval item. if train.question_canonical_sha256 in canonical_q_to_bases: for eval_base in canonical_q_to_bases[train.question_canonical_sha256]: eval_fp = eval_by_base[eval_base] if train.image_sha256 and set(train.image_sha256) & set(eval_fp.image_sha256): return ItemDecision( base_id=train.base_id, source=train.source, outcome=REJECT, reject_reason=( "canonical question SHA-256 and an image SHA-256 both match " "the same eval item" ), ) if f"{train.source}\0{train.native_id}" in source_native_to_base: return ItemDecision( base_id=train.base_id, source=train.source, outcome=REJECT, reject_reason="source/native_id explicitly matches the evaluation registry", ) if train.derived_from_eval: return ItemDecision( base_id=train.base_id, source=train.source, outcome=REJECT, reject_reason="provenance states the row derives from an evaluation-only source", ) # --- near-duplicate queue (docs/02 §5.3) --- matches: list[Match] = [] seen_eval: set[str] = set() for eval_fp in eval_fps: if eval_fp.base_id in seen_eval: continue match = _near_dup_match(train, eval_fp) if match is not None: matches.append(match) seen_eval.add(eval_fp.base_id) if matches: matches.sort(key=lambda m: m.eval_base_id) return ItemDecision( base_id=train.base_id, source=train.source, outcome=NEAR_DUP, matches=matches ) return ItemDecision(base_id=train.base_id, source=train.source, outcome=CLEAN) def _near_dup_match(train: LoadedFingerprints, eval_fp: LoadedFingerprints) -> Match | None: # pHash Hamming distance <= 4 between any train image and any eval image. for t_hash in train.image_phash: for e_hash in eval_fp.image_phash: if phash_hamming(t_hash, e_hash) <= PHASH_HAMMING_MAX: return Match( eval_base_id=eval_fp.base_id, reason="phash_hamming_le_4", evidence={"train_phash": t_hash, "eval_phash": e_hash}, ) # OCR MinHash estimated Jaccard >= 0.85 (only when both sides have OCR text). if ( train.ocr_minhash and eval_fp.ocr_minhash and (estimated_jaccard(train.ocr_minhash, eval_fp.ocr_minhash) >= OCR_JACCARD_MIN) ): return Match(eval_base_id=eval_fp.base_id, reason="ocr_minhash_jaccard_ge_0.85") # question MinHash estimated Jaccard >= 0.90. if ( train.question_minhash and eval_fp.question_minhash and ( estimated_jaccard(train.question_minhash, eval_fp.question_minhash) >= QUESTION_JACCARD_MIN ) ): return Match(eval_base_id=eval_fp.base_id, reason="question_minhash_jaccard_ge_0.90") # question + choices nearly the same but image crop differs. if ( train.question_canonical_sha256 and train.question_canonical_sha256 == eval_fp.question_canonical_sha256 and train.choices_sha256 and train.choices_sha256 == eval_fp.choices_sha256 and set(train.image_sha256).isdisjoint(set(eval_fp.image_sha256)) ): return Match(eval_base_id=eval_fp.base_id, reason="same_question_choices_different_image") return None def decontaminate( train_fps: Sequence[LoadedFingerprints], eval_fps: Sequence[LoadedFingerprints], ) -> DecontaminationResult: """Classify every train item against the eval index.""" eval_by_base = {fp.base_id: fp for fp in eval_fps} eval_image_shas: set[str] = set() source_native_to_base: dict[str, str] = {} canonical_q_to_bases: dict[str, list[str]] = {} for fp in eval_fps: eval_image_shas.update(fp.image_sha256) source_native_to_base[f"{fp.source}\0{fp.native_id}"] = fp.base_id if fp.question_canonical_sha256: canonical_q_to_bases.setdefault(fp.question_canonical_sha256, []).append(fp.base_id) rejected: list[ItemDecision] = [] near_duplicates: list[ItemDecision] = [] clean: list[ItemDecision] = [] for train in sorted(train_fps, key=lambda f: f.base_id): decision = _classify( train, eval_fps, eval_image_shas=eval_image_shas, source_native_to_base=source_native_to_base, eval_by_base=eval_by_base, canonical_q_to_bases=canonical_q_to_bases, ) if decision.outcome == REJECT: rejected.append(decision) elif decision.outcome == NEAR_DUP: near_duplicates.append(decision) else: clean.append(decision) return DecontaminationResult(rejected=rejected, near_duplicates=near_duplicates, clean=clean) def _allowlist_rows(base_ids: Sequence[str], source_of: Mapping[str, str]) -> list[dict[str, Any]]: return [ {"base_id": bid, "source": source_of.get(bid, ""), "policy": "train_candidate"} for bid in sorted(base_ids) ] def _near_duplicate_rejection_rows( near_duplicates: Sequence[ItemDecision], ) -> list[dict[str, Any]]: rows: list[dict[str, Any]] = [] for decision in sorted(near_duplicates, key=lambda d: d.base_id): for match in decision.matches: rows.append( { "base_id": decision.base_id, "source": decision.source, "eval_base_id": match.eval_base_id, "reason": match.reason, "evidence": match.evidence, "status": "auto_rejected", } ) return rows def write_allowlist_and_review( result: DecontaminationResult, eval_base_ids: Sequence[str], *, allowlist_path: str | None = None, review_path: str | None = None, decisions: Mapping[str, str] | None = None, ) -> dict[str, Any]: """Write the allowlist and automatic near-duplicate rejects as JSONL. ``decisions`` is retained only to fail loudly for callers using the removed human-override API. No evaluation base_id or near-duplicate may ever enter the allowlist. """ if decisions is not None: raise ValueError( "per-example decontamination decisions are forbidden; " "near-duplicates are always auto-rejected" ) train_source = {d.base_id: d.source for d in result.clean + result.near_duplicates} allowlist_ids = list(result.allowlist_base_ids) eval_id_set = set(eval_base_ids) summary: dict[str, Any] = { "allowlist_count": len(allowlist_ids), "rejected_count": len(result.rejected), "near_duplicate_count": len(result.near_duplicates), "near_duplicates_auto_rejected": len(result.near_duplicates), "undecided_near_duplicates": 0, "eval_ids_in_allowlist": sum(1 for bid in allowlist_ids if bid in eval_id_set), } if allowlist_path is not None: atomic_write_jsonl(allowlist_path, _allowlist_rows(allowlist_ids, train_source)) if review_path is not None: atomic_write_jsonl(review_path, _near_duplicate_rejection_rows(result.near_duplicates)) return summary def decontaminate_dbs( train_db: str, eval_db: str, *, allowlist_path: str | None = None, review_path: str | None = None, decisions: Mapping[str, str] | None = None, ) -> dict[str, Any]: """Load both indexes, decontaminate, and write outputs. Returns the summary.""" eval_fps = load_all(eval_db) result = decontaminate(load_all(train_db), eval_fps) summary = write_allowlist_and_review( result, [fp.base_id for fp in eval_fps], allowlist_path=allowlist_path, review_path=review_path, decisions=decisions, ) summary["rejected"] = [ {"base_id": d.base_id, "reason": d.reject_reason} for d in result.rejected ] return summary